Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f4/07dbc99b56bd85d963d3a9ce5c73f1/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f4/07dbc99b56bd85d963d3a9ce5c73f1/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0e/1a0e941a7bf1f63d9a8a36698635e3/659_bhK-T1-TRNA-1_B23MHV2LT4_1.sample_qc.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ab/2e08d254dda533ebb32aa8e5b01fb2/659_bhK-T1-TRNA-1_B23MHV2LT4_1
==> STAGING COMPLETE (4 inputs)

Processing Kallisto file: 659_bhK-T1-TRNA-1_B23MHV2LT4_1/abundance.h5
Successfully converted 659_bhK-T1-TRNA-1_B23MHV2LT4_1/abundance.h5 to 659_bhK-T1-TRNA-1_B23MHV2LT4_1_kallisto_mqc.tsv
  Sample: 659_bhK-T1-TRNA-1_B23MHV2LT4_1
  Mean Fragment Length: 139.6 bp
  Median Fragment Length: 128.0 bp
  pct_mito_est_counts: 0.01%
  pct_ribo_est_counts: 0.649%
  pct_hk_est_counts: 0.398%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.026%
  pct_ribo_tpm: 2.374%
  pct_hk_tpm: 0.706%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 5.803%