Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5d/6b6dc3abe6520719d8c27ec22f4c8e/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5d/6b6dc3abe6520719d8c27ec22f4c8e/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ae/229e60a7c26b42eb0fe139900ebb04/659_dRe-T1-TRNA-1_B23MHV2LT4_1_R1.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ae/229e60a7c26b42eb0fe139900ebb04/659_dRe-T1-TRNA-1_B23MHV2LT4_1_R2.fastq.gz
==> STAGING COMPLETE (4 inputs)

ls: *.fail.fastq.gz: No such file or directory
ls: *.merged.fastq.gz: No such file or directory