File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2a/3e85bf599c910ef794d7b60fa56f73/.command.err
Size
13.4 KB
Task
NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:ARRIBA_VISUALISATION (659_Lx-T1-TRNA-1_B23MHV2LT4_1)
Attempt

Content

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Loading annotation
Read 3041209 records
Warning in parseGtfAttribute("exon_number", exons) :
  Failed to parse 'exon_number' attribute of 8 record(s).
Loading protein domains
Read 134356 records
Drawing fusion #1: CCDC6:RET
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #2: CCDC6:RET
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #3: CCDC6:RET
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #4: CCDC6:RET
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #5: TLK2:AC018638.8
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #6: MTA1:PACS2
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #7: PCDHGA2:PCDHGA9
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #8: PCDHGA2:PCDHGB6
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #9: PCDHGA2:PCDHGB7
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #10: PCDHGA2:PCDHGC3
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #11: PCDHGA2:PCDHGC4
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #12: PCDHGA2:PCDHGC5
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #13: PCDHA10:PCDHAC1
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #14: PCDHA10:PCDHAC1
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #15: PCDHA10:PCDHAC2
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #16: PCDHA10:PCDHAC2
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #17: TVP23C:CDRT4
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #18: TVP23C:CDRT4
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #19: TVP23C:CDRT4
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #20: TVP23C:CDRT4
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #21: TVP23C:CDRT4
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #22: TVP23C:CDRT4
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #23: GUSBP13:NAIP
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #24: TLK2P1:AC110079.1
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #25: RPL14P1:RPL14P5
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: 659_Lx-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
Done