Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/59/1a5c67cb19173ddafc38fd1b4e4c48/659_dRe-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c7/cb839b30e62e5b315f96b759bc0bf5/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c7/cb839b30e62e5b315f96b759bc0bf5/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory
ls: *.crai: No such file or directory