Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d7/e12d1ce65c371ed72e537a5bb983fe/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5b/4a82afdcefb38114b293467649801b/659_d01-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d7/e12d1ce65c371ed72e537a5bb983fe/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory
ls: *.crai: No such file or directory