Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/79/f375d7c3bf63e642f59308b32f3575/659_cGW-T1-TRNA-1_B23MHV2LT4_1_2.fastp.fastq.gz
Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8d/6bcb22016bae0c9c875a5a6b73990e/.command.sh
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8d/6bcb22016bae0c9c875a5a6b73990e/.command.run
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/79/f375d7c3bf63e642f59308b32f3575/659_cGW-T1-TRNA-1_B23MHV2LT4_1_1.fastp.fastq.gz
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/32/dbf240306ccc650510191477cddb38/659_cGW-T1-TRNA-1_B23MHV2LT4_1.Chimeric.out.junction
==> STAGING COMPLETE (6 inputs)
-ctat genome lib [/tmp/nxf.fiHiQEp4Rs/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.fiHiQEp4Rs/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.fiHiQEp4Rs/./star-fusion.preliminary
-sample contains 94435241 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.fiHiQEp4Rs/ctat_genome_lib_build_dir -J /tmp/nxf.fiHiQEp4Rs/659_cGW-T1-TRNA-1_B23MHV2LT4_1.Chimeric.out.junction -O /tmp/nxf.fiHiQEp4Rs/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4
-parsing fusion evidence: /tmp/nxf.fiHiQEp4Rs/659_cGW-T1-TRNA-1_B23MHV2LT4_1.Chimeric.out.junction
-building interval tree based on /tmp/nxf.fiHiQEp4Rs/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes
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[1060000], rate=79301.75/min -building interval tree based on /tmp/nxf.fiHiQEp4Rs/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes
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[1050000], rate=67814.85/min -building interval tree based on /tmp/nxf.fiHiQEp4Rs/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes
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[1050000], rate=58768.66/min -building interval tree based on /tmp/nxf.fiHiQEp4Rs/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes
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[1040000], rate=56014.36/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.fiHiQEp4Rs/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.fiHiQEp4Rs/ctat_genome_lib_build_dir --filt_file /tmp/nxf.fiHiQEp4Rs/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.fiHiQEp4Rs/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-parsing /tmp/nxf.fiHiQEp4Rs/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.
6000000.00 reads per min processed...
12000000.00 reads per min processed...
9000000.00 reads per min processed...
8000000.00 reads per min processed...
6000000.00 reads per min processed...
5142857.14 reads per min processed...
5250000.00 reads per min processed...
4800000.00 reads per min processed...
4909090.91 reads per min processed...
4615384.62 reads per min processed...
4714285.71 reads per min processed...
4500000.00 reads per min processed...
4588235.29 reads per min processed...
4421052.63 reads per min processed...
4500000.00 reads per min processed...
4571428.57 reads per min processed...
4434782.61 reads per min processed...
4500000.00 reads per min processed...
4560000.00 reads per min processed...
4444444.44 reads per min processed...
4500000.00 reads per min processed...
4714285.71 reads per min processed...
4758620.69 reads per min processed...
4965517.24 reads per min processed...
5000000.00 reads per min processed...
5032258.06 reads per min processed...
4909090.91 reads per min processed...
4941176.47 reads per min processed...
4971428.57 reads per min processed...
4864864.86 reads per min processed...
4769230.77 reads per min processed...
4800000.00 reads per min processed...
4714285.71 reads per min processed...
4636363.64 reads per min processed...
4666666.67 reads per min processed...
done.
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.fiHiQEp4Rs/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.fiHiQEp4Rs/./star-fusion.preliminary/star-fusion
-parsing fusion evidence: /tmp/nxf.fiHiQEp4Rs/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.fiHiQEp4Rs/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.fiHiQEp4Rs/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.fiHiQEp4Rs/659_cGW-T1-TRNA-1_B23MHV2LT4_1.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.fiHiQEp4Rs/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.fiHiQEp4Rs/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.fiHiQEp4Rs/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -103101.466626
EM: Round [1] log likelihood: -103042.216150
EM: Round [2] log likelihood: -103018.673221
EM: Round [3] log likelihood: -103006.615606
EM: Round [4] log likelihood: -102999.865829
EM: Round [5] log likelihood: -102995.927644
EM: Round [6] log likelihood: -102993.548483
EM: Round [7] log likelihood: -102992.054416
EM: Round [8] log likelihood: -102991.076016
EM: Round [9] log likelihood: -102990.408029
EM: Round [10] log likelihood: -102989.934009
EM: Round [11] log likelihood: -102989.585979
EM: Round [12] log likelihood: -102989.322905
EM: Round [13] log likelihood: -102989.119124
EM: Round [14] log likelihood: -102988.958009
EM: Round [15] log likelihood: -102988.828425
EM: Round [16] log likelihood: -102988.722683
EM: Round [17] log likelihood: -102988.635323
EM: Round [18] log likelihood: -102988.562381
EM: Round [19] log likelihood: -102988.500912
EM: Round [20] log likelihood: -102988.448691
EM: Round [21] log likelihood: -102988.404008
EM: Round [22] log likelihood: -102988.365529
EM: Round [23] log likelihood: -102988.332203
EM: Round [24] log likelihood: -102988.303191
EM: Round [25] log likelihood: -102988.277814
EM: Round [26] log likelihood: -102988.255521
EM: Round [27] log likelihood: -102988.235861
EM: Round [28] log likelihood: -102988.218459
EM: Round [29] log likelihood: -102988.203003
EM: Round [30] log likelihood: -102988.189232
EM: Round [31] log likelihood: -102988.176927
EM: Round [32] log likelihood: -102988.165902
EM: Round [33] log likelihood: -102988.155996
EM: Round [34] log likelihood: -102988.147076
EM: Round [35] log likelihood: -102988.139025
EM: Round [36] log likelihood: -102988.131742
EM: Round [37] log likelihood: -102988.125140
EM: Round [38] log likelihood: -102988.119145
EM: Round [39] log likelihood: -102988.113690
EM: Round [40] log likelihood: -102988.108719
EM: Round [41] log likelihood: -102988.104180
EM: Round [42] log likelihood: -102988.100031
EM: Round [43] log likelihood: -102988.096231
EM: Round [44] log likelihood: -102988.092748
EM: Round [45] log likelihood: -102988.089550
EM: Round [46] log likelihood: -102988.086610
EM: Round [47] log likelihood: -102988.083904
EM: Round [48] log likelihood: -102988.081411
EM: Round [49] log likelihood: -102988.079112
EM: Round [50] log likelihood: -102988.076989
EM: Round [51] log likelihood: -102988.075028
EM: Round [52] log likelihood: -102988.073214
EM: Round [53] log likelihood: -102988.071534
EM: Round [54] log likelihood: -102988.069979
EM: Round [55] log likelihood: -102988.068537
EM: Round [56] log likelihood: -102988.067199
EM: Round [57] log likelihood: -102988.065956
EM: Round [58] log likelihood: -102988.064803
EM: Round [59] log likelihood: -102988.063730
EM: Round [60] log likelihood: -102988.062732
EM: Round [61] log likelihood: -102988.061804
EM: Round [62] log likelihood: -102988.060940
EM: Round [63] log likelihood: -102988.060135
EM: Round [64] log likelihood: -102988.059384
EM: Round [65] log likelihood: -102988.058685
EM: Round [66] log likelihood: -102988.058032
EM: Round [67] log likelihood: -102988.057423
EM: Round [68] log likelihood: -102988.056855
EM: Round [69] log likelihood: -102988.056324
EM: Round [70] log likelihood: -102988.055828
EM: Round [71] log likelihood: -102988.055365
EM: Round [72] log likelihood: -102988.054932
EM: Round [73] log likelihood: -102988.054527
EM: Round [74] log likelihood: -102988.054148
EM: Round [75] log likelihood: -102988.053793
EM: Round [76] log likelihood: -102988.053461
EM: Round [77] log likelihood: -102988.053151
EM: Round [78] log likelihood: -102988.052860
EM: Round [79] log likelihood: -102988.052587
EM: Round [80] log likelihood: -102988.052332
EM: Round [81] log likelihood: -102988.052093
EM: Round [82] log likelihood: -102988.051868
EM: Round [83] log likelihood: -102988.051658
EM: Round [84] log likelihood: -102988.051461
EM: Round [85] log likelihood: -102988.051276
EM: Round [86] log likelihood: -102988.051102
EM: Round [87] log likelihood: -102988.050939
EM: Round [88] log likelihood: -102988.050786
EM: Round [89] log likelihood: -102988.050642
EM: Round [90] log likelihood: -102988.050507
EM: Round [91] log likelihood: -102988.050381
EM: Round [92] log likelihood: -102988.050262
EM: Round [93] log likelihood: -102988.050150
EM: Round [94] log likelihood: -102988.050044
EM: Round [95] log likelihood: -102988.049945
EM: Stopping iterations at round 95 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -103055.968108
EM: Round [1] log likelihood: -103002.669696
EM: Round [2] log likelihood: -102982.430052
EM: Round [3] log likelihood: -102972.391523
EM: Round [4] log likelihood: -102966.878386
EM: Round [5] log likelihood: -102963.684614
EM: Round [6] log likelihood: -102961.751791
EM: Round [7] log likelihood: -102960.529089
EM: Round [8] log likelihood: -102959.720150
EM: Round [9] log likelihood: -102959.161593
EM: Round [10] log likelihood: -102958.760796
EM: Round [11] log likelihood: -102958.463489
EM: Round [12] log likelihood: -102958.236702
EM: Round [13] log likelihood: -102958.059643
EM: Round [14] log likelihood: -102957.918720
EM: Round [15] log likelihood: -102957.804738
EM: Round [16] log likelihood: -102957.711286
EM: Round [17] log likelihood: -102957.633773
EM: Round [18] log likelihood: -102957.568832
EM: Round [19] log likelihood: -102957.513944
EM: Round [20] log likelihood: -102957.467192
EM: Round [21] log likelihood: -102957.427092
EM: Round [22] log likelihood: -102957.392483
EM: Round [23] log likelihood: -102957.362443
EM: Round [24] log likelihood: -102957.336234
EM: Round [25] log likelihood: -102957.313260
EM: Round [26] log likelihood: -102957.293033
EM: Round [27] log likelihood: -102957.275153
EM: Round [28] log likelihood: -102957.259288
EM: Round [29] log likelihood: -102957.245163
EM: Round [30] log likelihood: -102957.232546
EM: Round [31] log likelihood: -102957.221241
EM: Round [32] log likelihood: -102957.211084
EM: Round [33] log likelihood: -102957.201934
EM: Round [34] log likelihood: -102957.193669
EM: Round [35] log likelihood: -102957.186188
EM: Round [36] log likelihood: -102957.179401
EM: Round [37] log likelihood: -102957.173231
EM: Round [38] log likelihood: -102957.167611
EM: Round [39] log likelihood: -102957.162482
EM: Round [40] log likelihood: -102957.157794
EM: Round [41] log likelihood: -102957.153501
EM: Round [42] log likelihood: -102957.149565
EM: Round [43] log likelihood: -102957.145951
EM: Round [44] log likelihood: -102957.142628
EM: Round [45] log likelihood: -102957.139569
EM: Round [46] log likelihood: -102957.136749
EM: Round [47] log likelihood: -102957.134147
EM: Round [48] log likelihood: -102957.131744
EM: Round [49] log likelihood: -102957.129522
EM: Round [50] log likelihood: -102957.127466
EM: Round [51] log likelihood: -102957.125561
EM: Round [52] log likelihood: -102957.123796
EM: Round [53] log likelihood: -102957.122158
EM: Round [54] log likelihood: -102957.120638
EM: Round [55] log likelihood: -102957.119225
EM: Round [56] log likelihood: -102957.117912
EM: Round [57] log likelihood: -102957.116691
EM: Round [58] log likelihood: -102957.115555
EM: Round [59] log likelihood: -102957.114497
EM: Round [60] log likelihood: -102957.113511
EM: Round [61] log likelihood: -102957.112592
EM: Round [62] log likelihood: -102957.111735
EM: Round [63] log likelihood: -102957.110936
EM: Round [64] log likelihood: -102957.110190
EM: Round [65] log likelihood: -102957.109494
EM: Round [66] log likelihood: -102957.108844
EM: Round [67] log likelihood: -102957.108236
EM: Round [68] log likelihood: -102957.107669
EM: Round [69] log likelihood: -102957.107138
EM: Round [70] log likelihood: -102957.106641
EM: Round [71] log likelihood: -102957.106177
EM: Round [72] log likelihood: -102957.105743
EM: Round [73] log likelihood: -102957.105336
EM: Round [74] log likelihood: -102957.104955
EM: Round [75] log likelihood: -102957.104599
EM: Round [76] log likelihood: -102957.104265
EM: Round [77] log likelihood: -102957.103952
EM: Round [78] log likelihood: -102957.103659
EM: Round [79] log likelihood: -102957.103384
EM: Round [80] log likelihood: -102957.103126
EM: Round [81] log likelihood: -102957.102884
EM: Round [82] log likelihood: -102957.102658
EM: Round [83] log likelihood: -102957.102445
EM: Round [84] log likelihood: -102957.102245
EM: Round [85] log likelihood: -102957.102058
EM: Round [86] log likelihood: -102957.101882
EM: Round [87] log likelihood: -102957.101717
EM: Round [88] log likelihood: -102957.101562
EM: Round [89] log likelihood: -102957.101416
EM: Round [90] log likelihood: -102957.101279
EM: Round [91] log likelihood: -102957.101151
EM: Round [92] log likelihood: -102957.101030
EM: Round [93] log likelihood: -102957.100916
EM: Round [94] log likelihood: -102957.100809
EM: Round [95] log likelihood: -102957.100708
EM: Round [96] log likelihood: -102957.100614
EM: Stopping iterations at round 96 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.fiHiQEp4Rs/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.fiHiQEp4Rs/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.fiHiQEp4Rs/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.fiHiQEp4Rs/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.fiHiQEp4Rs/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.fiHiQEp4Rs/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.fiHiQEp4Rs/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20
CMD: cp /tmp/nxf.fiHiQEp4Rs/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.fiHiQEp4Rs/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.fiHiQEp4Rs/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.fiHiQEp4Rs/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.fiHiQEp4Rs/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.fiHiQEp4Rs/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.fiHiQEp4Rs/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 94435241 > /tmp/nxf.fiHiQEp4Rs/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.fiHiQEp4Rs/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.fiHiQEp4Rs/ctat_genome_lib_build_dir > /tmp/nxf.fiHiQEp4Rs/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.fiHiQEp4Rs/ctat_genome_lib_build_dir --annotate /tmp/nxf.fiHiQEp4Rs/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.fiHiQEp4Rs/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.fiHiQEp4Rs/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.fiHiQEp4Rs/ctat_genome_lib_build_dir
-done, see /tmp/nxf.fiHiQEp4Rs/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.fiHiQEp4Rs/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.fiHiQEp4Rs/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 1097, filtered: 6461)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.fiHiQEp4Rs/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.fiHiQEp4Rs/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.fiHiQEp4Rs/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [ENSG00000280136.2]
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WARNING, no entry stored in dbm for [ENSG00000093100.13]
WARNING, no entry stored in dbm for [ENSG00000266504.1]
WARNING, no entry stored in dbm for [ENSG00000228549.4]
WARNING, no entry stored in dbm for [ENSG00000260239.2]
WARNING, no entry stored in dbm for [ENSG00000248202.2]
WARNING, no entry stored in dbm for [ENSG00000232679.2]
WARNING, no entry stored in dbm for [ENSG00000232079.7]
WARNING, no entry stored in dbm for [ENSG00000261008.7]
WARNING, no entry stored in dbm for [ENSG00000237877.7]
WARNING, no entry stored in dbm for [ENSG00000259471.1]
WARNING, no entry stored in dbm for [ENSG00000182648.13]
WARNING, no entry stored in dbm for [ENSG00000188825.14]
WARNING, no entry stored in dbm for [ENSG00000225329.3]
WARNING, no entry stored in dbm for [ENSG00000225329.3]
WARNING, no entry stored in dbm for [ENSG00000227404.1]
WARNING, no entry stored in dbm for [ENSG00000222736.1]
WARNING, no entry stored in dbm for [ENSG00000201317.1]
WARNING, no entry stored in dbm for [ENSG00000201458.1]
WARNING, no entry stored in dbm for [ENSG00000202538.1]
WARNING, no entry stored in dbm for [ENSG00000200795.1]
WARNING, no entry stored in dbm for [ENSG00000278275.2]
WARNING, no entry stored in dbm for [ENSG00000266820.1]
WARNING, no entry stored in dbm for [ENSG00000223612.3]
WARNING, no entry stored in dbm for [ENSG00000181984.11]
WARNING, no entry stored in dbm for [ENSG00000286694.1]
WARNING, no entry stored in dbm for [ENSG00000236778.8]
WARNING, no entry stored in dbm for [ENSG00000274471.2]
WARNING, no entry stored in dbm for [ENSG00000237361.3]
WARNING, no entry stored in dbm for [ENSG00000213468.7]
WARNING, no entry stored in dbm for [ENSG00000238013.1]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000224755.1]
WARNING, no entry stored in dbm for [ENSG00000255033.1]
WARNING, no entry stored in dbm for [ENSG00000227700.1]
WARNING, no entry stored in dbm for [ENSG00000248205.1]
WARNING, no entry stored in dbm for [ENSG00000236086.4]
WARNING, no entry stored in dbm for [ENSG00000123201.14]
WARNING, no entry stored in dbm for [ENSG00000230461.9]
WARNING, no entry stored in dbm for [ENSG00000239533.6]
WARNING, no entry stored in dbm for [ENSG00000214433.4]
WARNING, no entry stored in dbm for [ENSG00000250959.2]
WARNING, no entry stored in dbm for [ENSG00000240859.3]
WARNING, no entry stored in dbm for [ENSG00000271231.1]
WARNING, no entry stored in dbm for [ENSG00000266208.1]
WARNING, no entry stored in dbm for [ENSG00000206142.9]
WARNING, no entry stored in dbm for [ENSG00000236438.7]
WARNING, no entry stored in dbm for [ENSG00000273420.1]
WARNING, no entry stored in dbm for [ENSG00000237074.2]
WARNING, no entry stored in dbm for [ENSG00000231793.5]
WARNING, no entry stored in dbm for [ENSG00000200434.1]
WARNING, no entry stored in dbm for [ENSG00000259882.2]
WARNING, no entry stored in dbm for [ENSG00000259790.1]
WARNING, no entry stored in dbm for [ENSG00000250346.1]
WARNING, no entry stored in dbm for [ENSG00000226845.1]
WARNING, no entry stored in dbm for [ENSG00000237840.6]
WARNING, no entry stored in dbm for [ENSG00000235645.2]
WARNING, no entry stored in dbm for [ENSG00000229249.7]
WARNING, no entry stored in dbm for [ENSG00000231441.2]
WARNING, no entry stored in dbm for [ENSG00000273106.1]
WARNING, no entry stored in dbm for [ENSG00000180525.13]
WARNING, no entry stored in dbm for [ENSG00000236567.2]
WARNING, no entry stored in dbm for [ENSG00000235244.4]
WARNING, no entry stored in dbm for [ENSG00000222041.11]
WARNING, no entry stored in dbm for [ENSG00000285876.1]
WARNING, no entry stored in dbm for [ENSG00000206585.1]
WARNING, no entry stored in dbm for [ENSG00000273768.1]
WARNING, no entry stored in dbm for [ENSG00000277918.1]
WARNING, no entry stored in dbm for [ENSG00000206737.1]
WARNING, no entry stored in dbm for [ENSG00000207389.1]
WARNING, no entry stored in dbm for [ENSG00000207513.1]
WARNING, no entry stored in dbm for [ENSG00000206588.1]
WARNING, no entry stored in dbm for [ENSG00000206596.1]
WARNING, no entry stored in dbm for [ENSG00000207005.1]
WARNING, no entry stored in dbm for [ENSG00000206652.1]
WARNING, no entry stored in dbm for [ENSG00000181984.11]
WARNING, no entry stored in dbm for [ENSG00000286694.1]
WARNING, no entry stored in dbm for [ENSG00000199313.1]
WARNING, no entry stored in dbm for [ENSG00000202538.1]
WARNING, no entry stored in dbm for [ENSG00000242193.11]
WARNING, no entry stored in dbm for [ENSG00000225670.4]
WARNING, no entry stored in dbm for [ENSG00000227638.2]
WARNING, no entry stored in dbm for [ENSG00000259706.1]
WARNING, no entry stored in dbm for [ENSG00000259706.1]
WARNING, no entry stored in dbm for [ENSG00000223773.7]
WARNING, no entry stored in dbm for [ENSG00000241743.4]
WARNING, no entry stored in dbm for [ENSG00000257262.1]
WARNING, no entry stored in dbm for [ENSG00000257267.3]
WARNING, no entry stored in dbm for [ENSG00000233967.7]
WARNING, no entry stored in dbm for [ENSG00000283907.1]
WARNING, no entry stored in dbm for [ENSG00000279021.1]
WARNING, no entry stored in dbm for [ENSG00000162997.15]
WARNING, no entry stored in dbm for [ENSG00000285895.1]
WARNING, no entry stored in dbm for [ENSG00000205622.11]
WARNING, no entry stored in dbm for [ENSG00000225329.3]
WARNING, no entry stored in dbm for [ENSG00000266931.2]
WARNING, no entry stored in dbm for [ENSG00000287557.1]
WARNING, no entry stored in dbm for [ENSG00000285799.1]
WARNING, no entry stored in dbm for [ENSG00000254741.1]
WARNING, no entry stored in dbm for [ENSG00000215838.4]
WARNING, no entry stored in dbm for [ENSG00000225339.4]
WARNING, no entry stored in dbm for [ENSG00000286162.2]
WARNING, no entry stored in dbm for [ENSG00000226987.1]
WARNING, no entry stored in dbm for [ENSG00000243517.1]
WARNING, no entry stored in dbm for [ENSG00000228436.3]
WARNING, no entry stored in dbm for [ENSG00000183239.5]
WARNING, no entry stored in dbm for [ENSG00000243730.2]
WARNING, no entry stored in dbm for [ENSG00000288543.1]
WARNING, no entry stored in dbm for [ENSG00000272476.1]
WARNING, no entry stored in dbm for [ENSG00000222958.1]
WARNING, no entry stored in dbm for [ENSG00000224853.3]
WARNING, no entry stored in dbm for [ENSG00000265018.6]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000230869.1]
WARNING, no entry stored in dbm for [ENSG00000204177.10]
WARNING, no entry stored in dbm for [ENSG00000231713.2]
WARNING, no entry stored in dbm for [ENSG00000286912.1]
WARNING, no entry stored in dbm for [ENSG00000240197.1]
WARNING, no entry stored in dbm for [ENSG00000281741.2]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000272150.5]
WARNING, no entry stored in dbm for [ENSG00000261499.2]
WARNING, no entry stored in dbm for [ENSG00000260658.6]
WARNING, no entry stored in dbm for [ENSG00000226268.3]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
WARNING, no entry stored in dbm for [ENSG00000237961.4]
WARNING, no entry stored in dbm for [ENSG00000278931.1]
WARNING, no entry stored in dbm for [ENSG00000288022.1]
WARNING, no entry stored in dbm for [ENSG00000224479.6]
WARNING, no entry stored in dbm for [ENSG00000271959.1]
WARNING, no entry stored in dbm for [ENSG00000277654.6]
WARNING, no entry stored in dbm for [ENSG00000286152.1]
WARNING, no entry stored in dbm for [ENSG00000269471.1]
WARNING, no entry stored in dbm for [ENSG00000257286.1]
WARNING, no entry stored in dbm for [ENSG00000257159.1]
WARNING, no entry stored in dbm for [ENSG00000204745.4]
WARNING, no entry stored in dbm for [ENSG00000237666.2]
WARNING, no entry stored in dbm for [ENSG00000251313.1]
WARNING, no entry stored in dbm for [ENSG00000234129.8]
WARNING, no entry stored in dbm for [ENSG00000234129.8]
WARNING, no entry stored in dbm for [ENSG00000250938.6]
WARNING, no entry stored in dbm for [ENSG00000254485.5]
WARNING, no entry stored in dbm for [ENSG00000248600.2]
WARNING, no entry stored in dbm for [ENSG00000273658.1]
WARNING, no entry stored in dbm for [ENSG00000273658.1]
WARNING, no entry stored in dbm for [ENSG00000273658.1]
WARNING, no entry stored in dbm for [ENSG00000234713.3]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000242338.6]
WARNING, no entry stored in dbm for [ENSG00000260276.2]
WARNING, no entry stored in dbm for [ENSG00000234835.1]
WARNING, no entry stored in dbm for [ENSG00000259407.1]
WARNING, no entry stored in dbm for [ENSG00000226380.9]
WARNING, no entry stored in dbm for [ENSG00000267707.2]
WARNING, no entry stored in dbm for [ENSG00000269321.1]
WARNING, no entry stored in dbm for [ENSG00000238045.9]
WARNING, no entry stored in dbm for [ENSG00000276548.1]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000282951.1]
WARNING, no entry stored in dbm for [ENSG00000284052.1]
WARNING, no entry stored in dbm for [ENSG00000279009.1]
WARNING, no entry stored in dbm for [ENSG00000283525.1]
WARNING, no entry stored in dbm for [ENSG00000230825.2]
WARNING, no entry stored in dbm for [ENSG00000269604.1]
WARNING, no entry stored in dbm for [ENSG00000214243.3]
WARNING, no entry stored in dbm for [ENSG00000214243.3]
WARNING, no entry stored in dbm for [ENSG00000205485.13]
WARNING, no entry stored in dbm for [ENSG00000274177.1]
WARNING, no entry stored in dbm for [ENSG00000227532.1]
WARNING, no entry stored in dbm for [ENSG00000271484.1]
WARNING, no entry stored in dbm for [ENSG00000272267.2]
WARNING, no entry stored in dbm for [ENSG00000204352.4]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000286830.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000286830.1]
* STAR-Fusion complete. See output: /tmp/nxf.fiHiQEp4Rs/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)