AIH curated blacklist: matched 21 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 228
Pass (FILTER=PASS): 14 (6.1%)
Fail (FILTER=FAIL): 214 (93.9%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 21
All 21 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 30
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 29
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 26
confidence_below_min(medium<high): 25
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 20
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 10
confidence_below_min(low<high): 9
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 8
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 8
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 7
confidence_below_min(medium<high);aih_curated_blacklist: 7
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 6
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 4
aih_curated_blacklist: 4
confidence_below_min(low<high);total_reads_below_min(7.0<8.0): 4
Breakdown by confidence:
high: 14 pass, 6 fail (total: 20)
low: 0 pass, 124 fail (total: 124)
medium: 0 pass, 84 fail (total: 84)
Arriba filter: 228 rows -> 14 PASS; wrote 659_epP-T1-TRNA-1_B23MHV2LT4_1.arriba.fusions.filtered.tsv and 659_epP-T1-TRNA-1_B23MHV2LT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: 659_epP-T1-TRNA-1_B23MHV2LT4_1.arriba.fusions.filter_summary.txt