Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d1/d9518a96241faedd2d41938b6b349f/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d1/d9518a96241faedd2d41938b6b349f/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/82/06913f3cfc47bcdd34e68edc758251/FFPE_HD789_02_RNA_0015_B23MHV2LT4_1_R1.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/82/06913f3cfc47bcdd34e68edc758251/FFPE_HD789_02_RNA_0015_B23MHV2LT4_1_R2.fastq.gz
==> STAGING COMPLETE (4 inputs)

ls: *.fail.fastq.gz: No such file or directory
ls: *.merged.fastq.gz: No such file or directory