AIH curated blacklist: matched 16 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 269
Pass (FILTER=PASS): 32 (11.9%)
Fail (FILTER=FAIL): 237 (88.1%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 16
All 16 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 87
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 31
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 17
confidence_below_min(low<high): 16
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 13
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 12
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 10
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 10
confidence_below_min(medium<high);aih_curated_blacklist: 7
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 7
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 5
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 4
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 3
confidence_below_min(low<high);total_reads_below_min(7.0<8.0): 3
confidence_below_min(low<high);total_reads_below_min(6.0<8.0);aih_curated_blacklist: 2
Breakdown by confidence:
high: 32 pass, 2 fail (total: 34)
low: 0 pass, 107 fail (total: 107)
medium: 0 pass, 128 fail (total: 128)
Arriba filter: 269 rows -> 32 PASS; wrote 659_bGW-T1-TRNA-1_B23MHV2LT4_1.arriba.fusions.filtered.tsv and 659_bGW-T1-TRNA-1_B23MHV2LT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: 659_bGW-T1-TRNA-1_B23MHV2LT4_1.arriba.fusions.filter_summary.txt