File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2b/b1cbf68404b1c6d431bae255c4675c/.command.log
Size
1.1 KB
Task
NFCORE_RNAFUSION:RNAFUSION:ARRIBA_WORKFLOW:ARRIBA_FILTER (659_8h-T1-TRNA-1_B23MHV2LT4_1)
Attempt

Content

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  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2b/b1cbf68404b1c6d431bae255c4675c/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2b/b1cbf68404b1c6d431bae255c4675c/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/df/f24d8213a3ebfb55c4643cd04c40a5/659_8h-T1-TRNA-1_B23MHV2LT4_1.arriba.fusions.tsv
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/blacklist_breakpoint_database_2026-04-27.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/stage-0c31b8cc-cacb-407a-8f2b-eb2d8317e249/e8/83b3d86dc9f1df6763490ba67ef20d/arriba_filter_config.yaml
==> STAGING COMPLETE (5 inputs)


================================================================================
ARRIBA FILTERING SUMMARY
================================================================================

Total fusions: 0
Arriba filter: 0 rows -> 0 PASS; wrote 659_8h-T1-TRNA-1_B23MHV2LT4_1.arriba.fusions.filtered.tsv and 659_8h-T1-TRNA-1_B23MHV2LT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: 659_8h-T1-TRNA-1_B23MHV2LT4_1.arriba.fusions.filter_summary.txt