Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/68/c3ca5c8022779ac9e9522eacf50a0f/659_cTi-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ae/ae87de345fdc8a0c4f903121810bb0/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ae/ae87de345fdc8a0c4f903121810bb0/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory
ls: *.crai: No such file or directory