Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e6/839a36c67472b417a1d775832cfe8b/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2b/c5bff51d33e48895cee0dfd5f3ae60/659_dHy-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e6/839a36c67472b417a1d775832cfe8b/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory
ls: *.crai: No such file or directory