Using standard /usr/local/lib/perl5/site_perl/auto/share/dist/AGAT/agat_config.yaml file
------------------------------------------------------------------------------
| Another GFF Analysis Toolkit (AGAT) - Version: v1.2.0 |
| https://github.com/NBISweden/AGAT |
| National Bioinformatics Infrastructure Sweden (NBIS) - www.nbis.se |
------------------------------------------------------------------------------
------ Start parsing ------
-------------------------- parse options and metadata --------------------------
=> Accessing the feature_levels YAML file
Using standard /usr/local/lib/perl5/site_perl/auto/share/dist/AGAT/feature_levels.yaml file
=> Attribute used to group features when no Parent/ID relationship exists (i.e common tag):
* locus_tag
* gene_id
=> merge_loci option deactivated
=> Machine information:
This script is being run by perl v5.32.1
Bioperl location being used: /usr/local/lib/perl5/site_perl/Bio/
Operating system being used: linux
=> Accessing Ontology
No ontology accessible from the gff file header!
We use the SOFA ontology distributed with AGAT:
/usr/local/lib/perl5/site_perl/auto/share/dist/AGAT/so.obo
Read ontology /usr/local/lib/perl5/site_perl/auto/share/dist/AGAT/so.obo:
4 root terms, and 2596 total terms, and 1516 leaf terms
Filtering ontology:
We found 1861 terms that are sequence_feature or is_a child of it.
--------------------------------- parsing file ---------------------------------
=> Number of line in file: 18799
=> Number of comment lines: 0
=> Fasta included: No
=> Number of features lines: 18799
=> Number of feature type (3rd column): 2
* Level1: 0 =>
* level2: 0 =>
* level3: 2 => exon CDS
* unknown: 0 =>
=>Check because only level3 features:
* Number of feature with Parent attribute:0
* Number of feature with a common attribute:18799
=> Some common attributes and some Parent attributes missing.
/!\ For features where both are missing A single Level2 features (e.g. mRNA) and a single level1 (e.g. gene) will be created by AGAT, and all level3 feautres (e,g, CDS,exon) will be attached to them. This is probably not what you want...
see B. 2.2 and 3. at https://agat.readthedocs.io/en/latest/agat_how_does_it_work.html
/!\ For features where the common attribute or the parent attribute is missing, it would be fine as long as you do not expect isoforms in your annotation (Eukaryote). see B. 4. at https://agat.readthedocs.io/en/latest/agat_how_does_it_work.html
!! You might try to fix the issue by choosing a common tag attribute to use in order to group the features correctly (parameter --ct in agat_convert_sp_gxf2gxf.pl).
=> Version of the Bioperl GFF parser selected by AGAT: 2
------ End parsing (done in 4 second) ------
------ Start checks ------
---------------------------- Check1: feature types -----------------------------
----------------------------------- ontology -----------------------------------
All feature types in agreement with the Ontology.
------------------------------------- agat -------------------------------------
AGAT can deal with all the encountered feature types (3rd column)
------------------------------ done in 0 seconds -------------------------------
------------------------------ Check2: duplicates ------------------------------
None found
------------------------------ done in 0 seconds -------------------------------
-------------------------- Check3: sequential bucket ---------------------------
Nothing to check as sequential bucket!
------------------------------ done in 0 seconds -------------------------------
--------------------------- Check4: l2 linked to l3 ----------------------------
L1 and L2 created:
AC008735.2--AHI1 HAVANA gene 6256 70102 . + . FI_gene_label "AHI1^ENSG00000135541.22" ; ID "AC008735.2--AHI1^AHI1^ENSG00000135541.22" ; ccdsid "CCDS47483.1" ; exon_id "ENSE00002173559.1" ; exon_number 4 ; gene_id "AC008735.2--AHI1^AHI1^ENSG00000135541.22" ; gene_name AHI1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000015631.9" ; havana_transcript "OTTHUMT00000392256.2" ; hgnc_id "HGNC:21575" ; level 2 ; orig_coord_info "chr6,135492228,135492237,-" ; protein_id "ENSP00000265602.6" ; tag alternative_5_UTR basic MANE_Select appris_principal_2 CCDS ; transcript_id "AC008735.2--AHI1^ENST00000265602.11" ; transcript_name "AHI1-201" ; transcript_support_level 1 ; transcript_type protein_coding
AC008735.2--AHI1 HAVANA mRNA 6256 70102 . + . FI_gene_label "AHI1^ENSG00000135541.22" ; ID "AC008735.2--AHI1^ENST00000265602.11" ; Parent "AC008735.2--AHI1^AHI1^ENSG00000135541.22" ; ccdsid "CCDS47483.1" ; exon_id "ENSE00002173559.1" ; exon_number 4 ; gene_id "AC008735.2--AHI1^AHI1^ENSG00000135541.22" ; gene_name AHI1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000015631.9" ; havana_transcript "OTTHUMT00000392256.2" ; hgnc_id "HGNC:21575" ; level 2 ; orig_coord_info "chr6,135492228,135492237,-" ; protein_id "ENSP00000265602.6" ; tag alternative_5_UTR basic MANE_Select appris_principal_2 CCDS ; transcript_id "AC008735.2--AHI1^ENST00000265602.11" ; transcript_name "AHI1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
AC015911.9--SLFN12L HAVANA gene 4692 11059 . + . FI_gene_label "SLFN12L^ENSG00000205045.11" ; ID "AC015911.9--SLFN12L^SLFN12L^ENSG00000205045.11" ; exon_id "ENSE00003850559.1" ; exon_number 2 ; gene_id "AC015911.9--SLFN12L^SLFN12L^ENSG00000205045.11" ; gene_name SLFN12L ; gene_type protein_coding ; havana_gene "OTTHUMG00000193506.1" ; havana_transcript "OTTHUMT00000395748.3" ; hgnc_id "HGNC:33920" ; level 2 ; orig_coord_info "chr17,35479117,35480155,-" ; protein_id "ENSP00000437635.2" ; tag not_organism_supported basic appris_alternative_2 ; transcript_id "AC015911.9--SLFN12L^ENST00000260908.12" ; transcript_name "SLFN12L-201" ; transcript_support_level 5 ; transcript_type protein_coding
AC015911.9--SLFN12L HAVANA mRNA 4692 11059 . + . FI_gene_label "SLFN12L^ENSG00000205045.11" ; ID "AC015911.9--SLFN12L^ENST00000260908.12" ; Parent "AC015911.9--SLFN12L^SLFN12L^ENSG00000205045.11" ; exon_id "ENSE00003850559.1" ; exon_number 2 ; gene_id "AC015911.9--SLFN12L^SLFN12L^ENSG00000205045.11" ; gene_name SLFN12L ; gene_type protein_coding ; havana_gene "OTTHUMG00000193506.1" ; havana_transcript "OTTHUMT00000395748.3" ; hgnc_id "HGNC:33920" ; level 2 ; orig_coord_info "chr17,35479117,35480155,-" ; protein_id "ENSP00000437635.2" ; tag not_organism_supported basic appris_alternative_2 ; transcript_id "AC015911.9--SLFN12L^ENST00000260908.12" ; transcript_name "SLFN12L-201" ; transcript_support_level 5 ; transcript_type protein_coding
L1 and L2 created:
AC092807.3--DDAH1 HAVANA gene 13647 23704 . + . FI_gene_label "DDAH1^ENSG00000153904.21" ; ID "AC092807.3--DDAH1^DDAH1^ENSG00000153904.21" ; ccdsid "CCDS705.1" ; exon_id "ENSE00001013010.7" ; exon_number 1 ; gene_id "AC092807.3--DDAH1^DDAH1^ENSG00000153904.21" ; gene_name DDAH1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000191181.3" ; havana_transcript "OTTHUMT00000029189.3" ; hgnc_id "HGNC:2715" ; level 2 ; orig_coord_info "chr1,85464743,85465045,-" ; protein_id "ENSP00000284031.8" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "AC092807.3--DDAH1^ENST00000284031.13" ; transcript_name "DDAH1-201" ; transcript_support_level 1 ; transcript_type protein_coding
AC092807.3--DDAH1 HAVANA mRNA 13647 23704 . + . FI_gene_label "DDAH1^ENSG00000153904.21" ; ID "AC092807.3--DDAH1^ENST00000284031.13" ; Parent "AC092807.3--DDAH1^DDAH1^ENSG00000153904.21" ; ccdsid "CCDS705.1" ; exon_id "ENSE00001013010.7" ; exon_number 1 ; gene_id "AC092807.3--DDAH1^DDAH1^ENSG00000153904.21" ; gene_name DDAH1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000191181.3" ; havana_transcript "OTTHUMT00000029189.3" ; hgnc_id "HGNC:2715" ; level 2 ; orig_coord_info "chr1,85464743,85465045,-" ; protein_id "ENSP00000284031.8" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "AC092807.3--DDAH1^ENST00000284031.13" ; transcript_name "DDAH1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
ACOXL--AL445669.1 HAVANA gene 1096 13833 . + . FI_gene_label "ACOXL^ENSG00000153093.20" ; ID "ACOXL--AL445669.1^ACOXL^ENSG00000153093.20" ; exon_id "ENSE00002708869.1" ; exon_number 2 ; gene_id "ACOXL--AL445669.1^ACOXL^ENSG00000153093.20" ; gene_name ACOXL ; gene_type protein_coding ; havana_gene "OTTHUMG00000131257.5" ; havana_transcript "OTTHUMT00000254025.1" ; hgnc_id "HGNC:25621" ; level 2 ; orig_coord_info "chr2,110768390,110768464,+" ; protein_id "ENSP00000343717.4" ; tag basic ; transcript_id "ACOXL--AL445669.1^ENST00000340561.8" ; transcript_name "ACOXL-201" ; transcript_support_level 1 ; transcript_type protein_coding
ACOXL--AL445669.1 HAVANA mRNA 1096 13833 . + . FI_gene_label "ACOXL^ENSG00000153093.20" ; ID "ACOXL--AL445669.1^ENST00000340561.8" ; Parent "ACOXL--AL445669.1^ACOXL^ENSG00000153093.20" ; exon_id "ENSE00002708869.1" ; exon_number 2 ; gene_id "ACOXL--AL445669.1^ACOXL^ENSG00000153093.20" ; gene_name ACOXL ; gene_type protein_coding ; havana_gene "OTTHUMG00000131257.5" ; havana_transcript "OTTHUMT00000254025.1" ; hgnc_id "HGNC:25621" ; level 2 ; orig_coord_info "chr2,110768390,110768464,+" ; protein_id "ENSP00000343717.4" ; tag basic ; transcript_id "ACOXL--AL445669.1^ENST00000340561.8" ; transcript_name "ACOXL-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
ACOXL--CCDC30 HAVANA gene 1096 13833 . + . FI_gene_label "ACOXL^ENSG00000153093.20" ; ID "ACOXL--CCDC30^ACOXL^ENSG00000153093.20" ; exon_id "ENSE00002708869.1" ; exon_number 2 ; gene_id "ACOXL--CCDC30^ACOXL^ENSG00000153093.20" ; gene_name ACOXL ; gene_type protein_coding ; havana_gene "OTTHUMG00000131257.5" ; havana_transcript "OTTHUMT00000254025.1" ; hgnc_id "HGNC:25621" ; level 2 ; orig_coord_info "chr2,110768390,110768464,+" ; protein_id "ENSP00000343717.4" ; tag basic ; transcript_id "ACOXL--CCDC30^ENST00000340561.8" ; transcript_name "ACOXL-201" ; transcript_support_level 1 ; transcript_type protein_coding
ACOXL--CCDC30 HAVANA mRNA 1096 13833 . + . FI_gene_label "ACOXL^ENSG00000153093.20" ; ID "ACOXL--CCDC30^ENST00000340561.8" ; Parent "ACOXL--CCDC30^ACOXL^ENSG00000153093.20" ; exon_id "ENSE00002708869.1" ; exon_number 2 ; gene_id "ACOXL--CCDC30^ACOXL^ENSG00000153093.20" ; gene_name ACOXL ; gene_type protein_coding ; havana_gene "OTTHUMG00000131257.5" ; havana_transcript "OTTHUMT00000254025.1" ; hgnc_id "HGNC:25621" ; level 2 ; orig_coord_info "chr2,110768390,110768464,+" ; protein_id "ENSP00000343717.4" ; tag basic ; transcript_id "ACOXL--CCDC30^ENST00000340561.8" ; transcript_name "ACOXL-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
ACOXL--CCDC30 HAVANA gene 42430 88862 . + . FI_gene_label "CCDC30^ENSG00000186409.18" ; ID "ACOXL--CCDC30^CCDC30^ENSG00000186409.18" ; exon_id "ENSE00003881847.1" ; exon_number 2 ; gene_id "ACOXL--CCDC30^CCDC30^ENSG00000186409.18" ; gene_name CCDC30 ; gene_type protein_coding ; havana_gene "OTTHUMG00000007334.18" ; havana_transcript "OTTHUMT00000504705.2" ; hgnc_id "HGNC:26103" ; level 2 ; orig_coord_info "chr1,42482720,42482816,+" ; protein_id "ENSP00000340378.5" ; tag alternative_5_UTR not_organism_supported basic appris_alternative_2 ; transcript_id "ACOXL--CCDC30^ENST00000340612.6" ; transcript_name "CCDC30-201" ; transcript_support_level 5 ; transcript_type protein_coding
ACOXL--CCDC30 HAVANA mRNA 42430 88862 . + . FI_gene_label "CCDC30^ENSG00000186409.18" ; ID "ACOXL--CCDC30^ENST00000340612.6" ; Parent "ACOXL--CCDC30^CCDC30^ENSG00000186409.18" ; exon_id "ENSE00003881847.1" ; exon_number 2 ; gene_id "ACOXL--CCDC30^CCDC30^ENSG00000186409.18" ; gene_name CCDC30 ; gene_type protein_coding ; havana_gene "OTTHUMG00000007334.18" ; havana_transcript "OTTHUMT00000504705.2" ; hgnc_id "HGNC:26103" ; level 2 ; orig_coord_info "chr1,42482720,42482816,+" ; protein_id "ENSP00000340378.5" ; tag alternative_5_UTR not_organism_supported basic appris_alternative_2 ; transcript_id "ACOXL--CCDC30^ENST00000340612.6" ; transcript_name "CCDC30-201" ; transcript_support_level 5 ; transcript_type protein_coding
L1 and L2 created:
ACSL1--LINC02363 HAVANA gene 1851 26289 . + . FI_gene_label "ACSL1^ENSG00000151726.15" ; ID "ACSL1--LINC02363^ACSL1^ENSG00000151726.15" ; ccdsid "CCDS3839.1" ; exon_id "ENSE00003524468.1" ; exon_number 2 ; gene_id "ACSL1--LINC02363^ACSL1^ENSG00000151726.15" ; gene_name ACSL1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000160547.5" ; havana_transcript "OTTHUMT00000361098.3" ; hgnc_id "HGNC:3569" ; level 2 ; orig_coord_info "chr4,184803320,184803514,-" ; protein_id "ENSP00000281455.2" ; tag basic MANE_Select appris_principal_3 CCDS ; transcript_id "ACSL1--LINC02363^ENST00000281455.7" ; transcript_name "ACSL1-201" ; transcript_support_level 1 ; transcript_type protein_coding
ACSL1--LINC02363 HAVANA mRNA 1851 26289 . + . FI_gene_label "ACSL1^ENSG00000151726.15" ; ID "ACSL1--LINC02363^ENST00000281455.7" ; Parent "ACSL1--LINC02363^ACSL1^ENSG00000151726.15" ; ccdsid "CCDS3839.1" ; exon_id "ENSE00003524468.1" ; exon_number 2 ; gene_id "ACSL1--LINC02363^ACSL1^ENSG00000151726.15" ; gene_name ACSL1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000160547.5" ; havana_transcript "OTTHUMT00000361098.3" ; hgnc_id "HGNC:3569" ; level 2 ; orig_coord_info "chr4,184803320,184803514,-" ; protein_id "ENSP00000281455.2" ; tag basic MANE_Select appris_principal_3 CCDS ; transcript_id "ACSL1--LINC02363^ENST00000281455.7" ; transcript_name "ACSL1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
ACSL1--MYL12BP2 HAVANA gene 1851 26289 . + . FI_gene_label "ACSL1^ENSG00000151726.15" ; ID "ACSL1--MYL12BP2^ACSL1^ENSG00000151726.15" ; ccdsid "CCDS3839.1" ; exon_id "ENSE00003524468.1" ; exon_number 2 ; gene_id "ACSL1--MYL12BP2^ACSL1^ENSG00000151726.15" ; gene_name ACSL1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000160547.5" ; havana_transcript "OTTHUMT00000361098.3" ; hgnc_id "HGNC:3569" ; level 2 ; orig_coord_info "chr4,184803320,184803514,-" ; protein_id "ENSP00000281455.2" ; tag basic MANE_Select appris_principal_3 CCDS ; transcript_id "ACSL1--MYL12BP2^ENST00000281455.7" ; transcript_name "ACSL1-201" ; transcript_support_level 1 ; transcript_type protein_coding
ACSL1--MYL12BP2 HAVANA mRNA 1851 26289 . + . FI_gene_label "ACSL1^ENSG00000151726.15" ; ID "ACSL1--MYL12BP2^ENST00000281455.7" ; Parent "ACSL1--MYL12BP2^ACSL1^ENSG00000151726.15" ; ccdsid "CCDS3839.1" ; exon_id "ENSE00003524468.1" ; exon_number 2 ; gene_id "ACSL1--MYL12BP2^ACSL1^ENSG00000151726.15" ; gene_name ACSL1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000160547.5" ; havana_transcript "OTTHUMT00000361098.3" ; hgnc_id "HGNC:3569" ; level 2 ; orig_coord_info "chr4,184803320,184803514,-" ; protein_id "ENSP00000281455.2" ; tag basic MANE_Select appris_principal_3 CCDS ; transcript_id "ACSL1--MYL12BP2^ENST00000281455.7" ; transcript_name "ACSL1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
AFG3L2--NDC80 HAVANA gene 23974 44506 . + . FI_gene_label "NDC80^ENSG00000080986.13" ; ID "AFG3L2--NDC80^NDC80^ENSG00000080986.13" ; ccdsid "CCDS11827.1" ; exon_id "ENSE00000799508.1" ; exon_number 2 ; gene_id "AFG3L2--NDC80^NDC80^ENSG00000080986.13" ; gene_name NDC80 ; gene_type protein_coding ; havana_gene "OTTHUMG00000131483.5" ; havana_transcript "OTTHUMT00000254327.2" ; hgnc_id "HGNC:16909" ; level 2 ; orig_coord_info "chr18,2572986,2573086,+" ; protein_id "ENSP00000261597.4" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "AFG3L2--NDC80^ENST00000261597.9" ; transcript_name "NDC80-201" ; transcript_support_level 1 ; transcript_type protein_coding
AFG3L2--NDC80 HAVANA mRNA 23974 44506 . + . FI_gene_label "NDC80^ENSG00000080986.13" ; ID "AFG3L2--NDC80^ENST00000261597.9" ; Parent "AFG3L2--NDC80^NDC80^ENSG00000080986.13" ; ccdsid "CCDS11827.1" ; exon_id "ENSE00000799508.1" ; exon_number 2 ; gene_id "AFG3L2--NDC80^NDC80^ENSG00000080986.13" ; gene_name NDC80 ; gene_type protein_coding ; havana_gene "OTTHUMG00000131483.5" ; havana_transcript "OTTHUMT00000254327.2" ; hgnc_id "HGNC:16909" ; level 2 ; orig_coord_info "chr18,2572986,2573086,+" ; protein_id "ENSP00000261597.4" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "AFG3L2--NDC80^ENST00000261597.9" ; transcript_name "NDC80-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
AFG3L2--NDC80 HAVANA gene 1001 20973 . + . FI_gene_label "AFG3L2^ENSG00000141385.10" ; ID "AFG3L2--NDC80^AFG3L2^ENSG00000141385.10" ; ccdsid "CCDS11859.1" ; exon_id "ENSE00001255364.6" ; exon_number 1 ; gene_id "AFG3L2--NDC80^AFG3L2^ENSG00000141385.10" ; gene_name AFG3L2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000131695.4" ; havana_transcript "OTTHUMT00000254603.3" ; hgnc_id "HGNC:315" ; level 2 ; orig_coord_info "chr18,12376969,12377082,-" ; protein_id "ENSP00000269143.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "AFG3L2--NDC80^ENST00000269143.8" ; transcript_name "AFG3L2-201" ; transcript_support_level 1 ; transcript_type protein_coding
AFG3L2--NDC80 HAVANA mRNA 1001 20973 . + . FI_gene_label "AFG3L2^ENSG00000141385.10" ; ID "AFG3L2--NDC80^ENST00000269143.8" ; Parent "AFG3L2--NDC80^AFG3L2^ENSG00000141385.10" ; ccdsid "CCDS11859.1" ; exon_id "ENSE00001255364.6" ; exon_number 1 ; gene_id "AFG3L2--NDC80^AFG3L2^ENSG00000141385.10" ; gene_name AFG3L2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000131695.4" ; havana_transcript "OTTHUMT00000254603.3" ; hgnc_id "HGNC:315" ; level 2 ; orig_coord_info "chr18,12376969,12377082,-" ; protein_id "ENSP00000269143.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "AFG3L2--NDC80^ENST00000269143.8" ; transcript_name "AFG3L2-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
BMPR1B--PDLIM5 HAVANA gene 8163 19884 . + . FI_gene_label "BMPR1B^ENSG00000138696.11" ; ID "BMPR1B--PDLIM5^BMPR1B^ENSG00000138696.11" ; ccdsid "CCDS3642.1" ; exon_id "ENSE00003894599.1" ; exon_number 2 ; gene_id "BMPR1B--PDLIM5^BMPR1B^ENSG00000138696.11" ; gene_name BMPR1B ; gene_type protein_coding ; havana_gene "OTTHUMG00000130991.6" ; havana_transcript "OTTHUMT00000363051.1" ; hgnc_id "HGNC:1077" ; level 2 ; orig_coord_info "chr4,95104425,95104567,+" ; protein_id "ENSP00000264568.4" ; tag alternative_5_UTR basic appris_principal_4 CCDS ; transcript_id "BMPR1B--PDLIM5^ENST00000264568.8" ; transcript_name "BMPR1B-201" ; transcript_support_level 2 ; transcript_type protein_coding
BMPR1B--PDLIM5 HAVANA mRNA 8163 19884 . + . FI_gene_label "BMPR1B^ENSG00000138696.11" ; ID "BMPR1B--PDLIM5^ENST00000264568.8" ; Parent "BMPR1B--PDLIM5^BMPR1B^ENSG00000138696.11" ; ccdsid "CCDS3642.1" ; exon_id "ENSE00003894599.1" ; exon_number 2 ; gene_id "BMPR1B--PDLIM5^BMPR1B^ENSG00000138696.11" ; gene_name BMPR1B ; gene_type protein_coding ; havana_gene "OTTHUMG00000130991.6" ; havana_transcript "OTTHUMT00000363051.1" ; hgnc_id "HGNC:1077" ; level 2 ; orig_coord_info "chr4,95104425,95104567,+" ; protein_id "ENSP00000264568.4" ; tag alternative_5_UTR basic appris_principal_4 CCDS ; transcript_id "BMPR1B--PDLIM5^ENST00000264568.8" ; transcript_name "BMPR1B-201" ; transcript_support_level 2 ; transcript_type protein_coding
L1 and L2 created:
BMPR1B--PDLIM5 HAVANA gene 26601 58161 . + . FI_gene_label "PDLIM5^ENSG00000163110.15" ; ID "BMPR1B--PDLIM5^PDLIM5^ENSG00000163110.15" ; ccdsid "CCDS3641.1" ; exon_id "ENSE00003692320.1" ; exon_number 2 ; gene_id "BMPR1B--PDLIM5^PDLIM5^ENSG00000163110.15" ; gene_name PDLIM5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000130973.11" ; havana_transcript "OTTHUMT00000253586.2" ; hgnc_id "HGNC:17468" ; level 2 ; orig_coord_info "chr4,94455289,94455384,+" ; protein_id "ENSP00000321746.4" ; tag basic MANE_Select appris_alternative_2 CCDS ; transcript_id "BMPR1B--PDLIM5^ENST00000317968.9" ; transcript_name "PDLIM5-201" ; transcript_support_level 1 ; transcript_type protein_coding
BMPR1B--PDLIM5 HAVANA mRNA 26601 58161 . + . FI_gene_label "PDLIM5^ENSG00000163110.15" ; ID "BMPR1B--PDLIM5^ENST00000317968.9" ; Parent "BMPR1B--PDLIM5^PDLIM5^ENSG00000163110.15" ; ccdsid "CCDS3641.1" ; exon_id "ENSE00003692320.1" ; exon_number 2 ; gene_id "BMPR1B--PDLIM5^PDLIM5^ENSG00000163110.15" ; gene_name PDLIM5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000130973.11" ; havana_transcript "OTTHUMT00000253586.2" ; hgnc_id "HGNC:17468" ; level 2 ; orig_coord_info "chr4,94455289,94455384,+" ; protein_id "ENSP00000321746.4" ; tag basic MANE_Select appris_alternative_2 CCDS ; transcript_id "BMPR1B--PDLIM5^ENST00000317968.9" ; transcript_name "PDLIM5-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
BRWD1--HLCS HAVANA gene 2535 55566 . + . FI_gene_label "BRWD1^ENSG00000185658.14" ; ID "BRWD1--HLCS^BRWD1^ENSG00000185658.14" ; ccdsid "CCDS13662.1" ; exon_id "ENSE00001880434.1" ; exon_number 1 ; gene_id "BRWD1--HLCS^BRWD1^ENSG00000185658.14" ; gene_name BRWD1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000066030.8" ; havana_transcript "OTTHUMT00000141398.3" ; hgnc_id "HGNC:12760" ; level 2 ; orig_coord_info "chr21,39313443,39313491,-" ; protein_id "ENSP00000330753.2" ; tag basic appris_principal_4 CCDS ; transcript_id "BRWD1--HLCS^ENST00000333229.6" ; transcript_name "BRWD1-201" ; transcript_support_level 1 ; transcript_type protein_coding
BRWD1--HLCS HAVANA mRNA 2535 55566 . + . FI_gene_label "BRWD1^ENSG00000185658.14" ; ID "BRWD1--HLCS^ENST00000333229.6" ; Parent "BRWD1--HLCS^BRWD1^ENSG00000185658.14" ; ccdsid "CCDS13662.1" ; exon_id "ENSE00001880434.1" ; exon_number 1 ; gene_id "BRWD1--HLCS^BRWD1^ENSG00000185658.14" ; gene_name BRWD1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000066030.8" ; havana_transcript "OTTHUMT00000141398.3" ; hgnc_id "HGNC:12760" ; level 2 ; orig_coord_info "chr21,39313443,39313491,-" ; protein_id "ENSP00000330753.2" ; tag basic appris_principal_4 CCDS ; transcript_id "BRWD1--HLCS^ENST00000333229.6" ; transcript_name "BRWD1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
BRWD1--HLCS HAVANA gene 58567 80865 . + . FI_gene_label "HLCS^ENSG00000159267.16" ; ID "BRWD1--HLCS^HLCS^ENSG00000159267.16" ; ccdsid "CCDS13647.1" ; exon_id "ENSE00001282204.4" ; exon_number 4 ; gene_id "BRWD1--HLCS^HLCS^ENSG00000159267.16" ; gene_name HLCS ; gene_type protein_coding ; havana_gene "OTTHUMG00000086636.4" ; havana_transcript "OTTHUMT00000194686.2" ; hgnc_id "HGNC:4976" ; level 2 ; orig_coord_info "chr21,36938832,36938883,-" ; protein_id "ENSP00000338387.3" ; tag basic appris_principal_1 CCDS ; transcript_id "BRWD1--HLCS^ENST00000336648.8" ; transcript_name "HLCS-201" ; transcript_support_level 1 ; transcript_type protein_coding
BRWD1--HLCS HAVANA mRNA 58567 80865 . + . FI_gene_label "HLCS^ENSG00000159267.16" ; ID "BRWD1--HLCS^ENST00000336648.8" ; Parent "BRWD1--HLCS^HLCS^ENSG00000159267.16" ; ccdsid "CCDS13647.1" ; exon_id "ENSE00001282204.4" ; exon_number 4 ; gene_id "BRWD1--HLCS^HLCS^ENSG00000159267.16" ; gene_name HLCS ; gene_type protein_coding ; havana_gene "OTTHUMG00000086636.4" ; havana_transcript "OTTHUMT00000194686.2" ; hgnc_id "HGNC:4976" ; level 2 ; orig_coord_info "chr21,36938832,36938883,-" ; protein_id "ENSP00000338387.3" ; tag basic appris_principal_1 CCDS ; transcript_id "BRWD1--HLCS^ENST00000336648.8" ; transcript_name "HLCS-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
CAMK2B--TCAF1 HAVANA gene 3060 30536 . + . FI_gene_label "CAMK2B^ENSG00000058404.20" ; ID "CAMK2B--TCAF1^CAMK2B^ENSG00000058404.20" ; ccdsid "CCDS43573.1" ; exon_id "ENSE00001851566.1" ; exon_number 1 ; gene_id "CAMK2B--TCAF1^CAMK2B^ENSG00000058404.20" ; gene_name CAMK2B ; gene_type protein_coding ; havana_gene "OTTHUMG00000023491.14" ; havana_transcript "OTTHUMT00000377323.1" ; hgnc_id "HGNC:1461" ; level 2 ; orig_coord_info "chr7,44325357,44325421,-" ; protein_id "ENSP00000258682.6" ; tag basic appris_principal_4 CCDS ; transcript_id "CAMK2B--TCAF1^ENST00000258682.10" ; transcript_name "CAMK2B-201" ; transcript_support_level 1 ; transcript_type protein_coding
CAMK2B--TCAF1 HAVANA mRNA 3060 30536 . + . FI_gene_label "CAMK2B^ENSG00000058404.20" ; ID "CAMK2B--TCAF1^ENST00000258682.10" ; Parent "CAMK2B--TCAF1^CAMK2B^ENSG00000058404.20" ; ccdsid "CCDS43573.1" ; exon_id "ENSE00001851566.1" ; exon_number 1 ; gene_id "CAMK2B--TCAF1^CAMK2B^ENSG00000058404.20" ; gene_name CAMK2B ; gene_type protein_coding ; havana_gene "OTTHUMG00000023491.14" ; havana_transcript "OTTHUMT00000377323.1" ; hgnc_id "HGNC:1461" ; level 2 ; orig_coord_info "chr7,44325357,44325421,-" ; protein_id "ENSP00000258682.6" ; tag basic appris_principal_4 CCDS ; transcript_id "CAMK2B--TCAF1^ENST00000258682.10" ; transcript_name "CAMK2B-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
CAMK2B--TCAF1 HAVANA gene 35889 49376 . + . FI_gene_label "TCAF1^ENSG00000198420.10" ; ID "CAMK2B--TCAF1^TCAF1^ENSG00000198420.10" ; ccdsid "CCDS56514.1" ; exon_id "ENSE00001433460.1" ; exon_number 2 ; gene_id "CAMK2B--TCAF1^TCAF1^ENSG00000198420.10" ; gene_name TCAF1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000157773.4" ; havana_transcript "OTTHUMT00000349584.1" ; hgnc_id "HGNC:22201" ; level 2 ; orig_coord_info "chr7,143875989,143876608,-" ; protein_id "ENSP00000348220.2" ; tag basic appris_alternative_1 CCDS ; transcript_id "CAMK2B--TCAF1^ENST00000355951.2" ; transcript_name "TCAF1-201" ; transcript_support_level 1 ; transcript_type protein_coding
CAMK2B--TCAF1 HAVANA mRNA 35889 49376 . + . FI_gene_label "TCAF1^ENSG00000198420.10" ; ID "CAMK2B--TCAF1^ENST00000355951.2" ; Parent "CAMK2B--TCAF1^TCAF1^ENSG00000198420.10" ; ccdsid "CCDS56514.1" ; exon_id "ENSE00001433460.1" ; exon_number 2 ; gene_id "CAMK2B--TCAF1^TCAF1^ENSG00000198420.10" ; gene_name TCAF1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000157773.4" ; havana_transcript "OTTHUMT00000349584.1" ; hgnc_id "HGNC:22201" ; level 2 ; orig_coord_info "chr7,143875989,143876608,-" ; protein_id "ENSP00000348220.2" ; tag basic appris_alternative_1 CCDS ; transcript_id "CAMK2B--TCAF1^ENST00000355951.2" ; transcript_name "TCAF1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
CCT8--BRWD1 HAVANA gene 1150 13106 . + . FI_gene_label "CCT8^ENSG00000156261.13" ; ID "CCT8--BRWD1^CCT8^ENSG00000156261.13" ; ccdsid "CCDS33528.1" ; exon_id "ENSE00001504993.3" ; exon_number 1 ; gene_id "CCT8--BRWD1^CCT8^ENSG00000156261.13" ; gene_name CCT8 ; gene_type protein_coding ; havana_gene "OTTHUMG00000044595.6" ; havana_transcript "OTTHUMT00000171822.2" ; hgnc_id "HGNC:1623" ; level 2 ; orig_coord_info "chr21,29073531,29073590,-" ; protein_id "ENSP00000286788.4" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "CCT8--BRWD1^ENST00000286788.9" ; transcript_name "CCT8-201" ; transcript_support_level 1 ; transcript_type protein_coding
CCT8--BRWD1 HAVANA mRNA 1150 13106 . + . FI_gene_label "CCT8^ENSG00000156261.13" ; ID "CCT8--BRWD1^ENST00000286788.9" ; Parent "CCT8--BRWD1^CCT8^ENSG00000156261.13" ; ccdsid "CCDS33528.1" ; exon_id "ENSE00001504993.3" ; exon_number 1 ; gene_id "CCT8--BRWD1^CCT8^ENSG00000156261.13" ; gene_name CCT8 ; gene_type protein_coding ; havana_gene "OTTHUMG00000044595.6" ; havana_transcript "OTTHUMT00000171822.2" ; hgnc_id "HGNC:1623" ; level 2 ; orig_coord_info "chr21,29073531,29073590,-" ; protein_id "ENSP00000286788.4" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "CCT8--BRWD1^ENST00000286788.9" ; transcript_name "CCT8-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
CCT8--BRWD1 HAVANA gene 18162 71193 . + . FI_gene_label "BRWD1^ENSG00000185658.14" ; ID "CCT8--BRWD1^BRWD1^ENSG00000185658.14" ; ccdsid "CCDS13662.1" ; exon_id "ENSE00001880434.1" ; exon_number 1 ; gene_id "CCT8--BRWD1^BRWD1^ENSG00000185658.14" ; gene_name BRWD1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000066030.8" ; havana_transcript "OTTHUMT00000141398.3" ; hgnc_id "HGNC:12760" ; level 2 ; orig_coord_info "chr21,39313443,39313491,-" ; protein_id "ENSP00000330753.2" ; tag basic appris_principal_4 CCDS ; transcript_id "CCT8--BRWD1^ENST00000333229.6" ; transcript_name "BRWD1-201" ; transcript_support_level 1 ; transcript_type protein_coding
CCT8--BRWD1 HAVANA mRNA 18162 71193 . + . FI_gene_label "BRWD1^ENSG00000185658.14" ; ID "CCT8--BRWD1^ENST00000333229.6" ; Parent "CCT8--BRWD1^BRWD1^ENSG00000185658.14" ; ccdsid "CCDS13662.1" ; exon_id "ENSE00001880434.1" ; exon_number 1 ; gene_id "CCT8--BRWD1^BRWD1^ENSG00000185658.14" ; gene_name BRWD1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000066030.8" ; havana_transcript "OTTHUMT00000141398.3" ; hgnc_id "HGNC:12760" ; level 2 ; orig_coord_info "chr21,39313443,39313491,-" ; protein_id "ENSP00000330753.2" ; tag basic appris_principal_4 CCDS ; transcript_id "CCT8--BRWD1^ENST00000333229.6" ; transcript_name "BRWD1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
CCT8--ERG HAVANA gene 1150 13106 . + . FI_gene_label "CCT8^ENSG00000156261.13" ; ID "CCT8--ERG^CCT8^ENSG00000156261.13" ; ccdsid "CCDS33528.1" ; exon_id "ENSE00001504993.3" ; exon_number 1 ; gene_id "CCT8--ERG^CCT8^ENSG00000156261.13" ; gene_name CCT8 ; gene_type protein_coding ; havana_gene "OTTHUMG00000044595.6" ; havana_transcript "OTTHUMT00000171822.2" ; hgnc_id "HGNC:1623" ; level 2 ; orig_coord_info "chr21,29073531,29073590,-" ; protein_id "ENSP00000286788.4" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "CCT8--ERG^ENST00000286788.9" ; transcript_name "CCT8-201" ; transcript_support_level 1 ; transcript_type protein_coding
CCT8--ERG HAVANA mRNA 1150 13106 . + . FI_gene_label "CCT8^ENSG00000156261.13" ; ID "CCT8--ERG^ENST00000286788.9" ; Parent "CCT8--ERG^CCT8^ENSG00000156261.13" ; ccdsid "CCDS33528.1" ; exon_id "ENSE00001504993.3" ; exon_number 1 ; gene_id "CCT8--ERG^CCT8^ENSG00000156261.13" ; gene_name CCT8 ; gene_type protein_coding ; havana_gene "OTTHUMG00000044595.6" ; havana_transcript "OTTHUMT00000171822.2" ; hgnc_id "HGNC:1623" ; level 2 ; orig_coord_info "chr21,29073531,29073590,-" ; protein_id "ENSP00000286788.4" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "CCT8--ERG^ENST00000286788.9" ; transcript_name "CCT8-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
CCT8--ERG HAVANA gene 21075 40384 . + . FI_gene_label "ERG^ENSG00000157554.19" ; ID "CCT8--ERG^ERG^ENSG00000157554.19" ; ccdsid "CCDS13658.1" ; exon_id "ENSE00001931764.2" ; exon_number 1 ; gene_id "CCT8--ERG^ERG^ENSG00000157554.19" ; gene_name ERG ; gene_type protein_coding ; havana_gene "OTTHUMG00000090767.4" ; havana_transcript "OTTHUMT00000207531.2" ; hgnc_id "HGNC:3446" ; level 2 ; orig_coord_info "chr21,38498363,38498380,-" ; protein_id "ENSP00000288319.7" ; tag CAGE_supported_TSS basic MANE_Select appris_principal_1 CCDS ; transcript_id "CCT8--ERG^ENST00000288319.12" ; transcript_name "ERG-201" ; transcript_support_level 1 ; transcript_type protein_coding
CCT8--ERG HAVANA mRNA 21075 40384 . + . FI_gene_label "ERG^ENSG00000157554.19" ; ID "CCT8--ERG^ENST00000288319.12" ; Parent "CCT8--ERG^ERG^ENSG00000157554.19" ; ccdsid "CCDS13658.1" ; exon_id "ENSE00001931764.2" ; exon_number 1 ; gene_id "CCT8--ERG^ERG^ENSG00000157554.19" ; gene_name ERG ; gene_type protein_coding ; havana_gene "OTTHUMG00000090767.4" ; havana_transcript "OTTHUMT00000207531.2" ; hgnc_id "HGNC:3446" ; level 2 ; orig_coord_info "chr21,38498363,38498380,-" ; protein_id "ENSP00000288319.7" ; tag CAGE_supported_TSS basic MANE_Select appris_principal_1 CCDS ; transcript_id "CCT8--ERG^ENST00000288319.12" ; transcript_name "ERG-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
CPNE4--RNF144B HAVANA gene 32467 45637 . + . FI_gene_label "RNF144B^ENSG00000137393.10" ; ID "CPNE4--RNF144B^RNF144B^ENSG00000137393.10" ; ccdsid "CCDS34345.1" ; exon_id "ENSE00003688740.1" ; exon_number 2 ; gene_id "CPNE4--RNF144B^RNF144B^ENSG00000137393.10" ; gene_name RNF144B ; gene_type protein_coding ; havana_gene "OTTHUMG00000014322.2" ; havana_transcript "OTTHUMT00000039965.2" ; hgnc_id "HGNC:21578" ; level 2 ; orig_coord_info "chr6,18399535,18399699,+" ; protein_id "ENSP00000259939.4" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "CPNE4--RNF144B^ENST00000259939.4" ; transcript_name "RNF144B-201" ; transcript_support_level 1 ; transcript_type protein_coding
CPNE4--RNF144B HAVANA mRNA 32467 45637 . + . FI_gene_label "RNF144B^ENSG00000137393.10" ; ID "CPNE4--RNF144B^ENST00000259939.4" ; Parent "CPNE4--RNF144B^RNF144B^ENSG00000137393.10" ; ccdsid "CCDS34345.1" ; exon_id "ENSE00003688740.1" ; exon_number 2 ; gene_id "CPNE4--RNF144B^RNF144B^ENSG00000137393.10" ; gene_name RNF144B ; gene_type protein_coding ; havana_gene "OTTHUMG00000014322.2" ; havana_transcript "OTTHUMT00000039965.2" ; hgnc_id "HGNC:21578" ; level 2 ; orig_coord_info "chr6,18399535,18399699,+" ; protein_id "ENSP00000259939.4" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "CPNE4--RNF144B^ENST00000259939.4" ; transcript_name "RNF144B-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
CPNE4--RNF144B ENSEMBL gene 6503 29459 . + . FI_gene_label "CPNE4^ENSG00000196353.11" ; ID "CPNE4--RNF144B^CPNE4^ENSG00000196353.11" ; ccdsid "CCDS3072.1" ; exon_id "ENSE00003536115.1" ; exon_number 2 ; gene_id "CPNE4--RNF144B^CPNE4^ENSG00000196353.11" ; gene_name CPNE4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000159631.14" ; hgnc_id "HGNC:2317" ; level 3 ; orig_coord_info "chr3,131905264,131905443,-" ; protein_id "ENSP00000411904.1" ; tag basic appris_principal_1 CCDS ; transcript_id "CPNE4--RNF144B^ENST00000429747.5" ; transcript_name "CPNE4-201" ; transcript_support_level 1 ; transcript_type protein_coding
CPNE4--RNF144B ENSEMBL mRNA 6503 29459 . + . FI_gene_label "CPNE4^ENSG00000196353.11" ; ID "CPNE4--RNF144B^ENST00000429747.5" ; Parent "CPNE4--RNF144B^CPNE4^ENSG00000196353.11" ; ccdsid "CCDS3072.1" ; exon_id "ENSE00003536115.1" ; exon_number 2 ; gene_id "CPNE4--RNF144B^CPNE4^ENSG00000196353.11" ; gene_name CPNE4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000159631.14" ; hgnc_id "HGNC:2317" ; level 3 ; orig_coord_info "chr3,131905264,131905443,-" ; protein_id "ENSP00000411904.1" ; tag basic appris_principal_1 CCDS ; transcript_id "CPNE4--RNF144B^ENST00000429747.5" ; transcript_name "CPNE4-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
DCP2--LRRC4C HAVANA gene 31231 38702 . + . FI_gene_label "LRRC4C^ENSG00000148948.8" ; ID "DCP2--LRRC4C^LRRC4C^ENSG00000148948.8" ; ccdsid "CCDS31464.1" ; exon_id "ENSE00000988252.2" ; exon_number 2 ; gene_id "DCP2--LRRC4C^LRRC4C^ENSG00000148948.8" ; gene_name LRRC4C ; gene_type protein_coding ; havana_gene "OTTHUMG00000166383.5" ; havana_transcript "OTTHUMT00000389499.1" ; hgnc_id "HGNC:29317" ; level 2 ; orig_coord_info "chr11,40114373,40116292,-" ; protein_id "ENSP00000278198.1" ; tag basic appris_principal_1 CCDS ; transcript_id "DCP2--LRRC4C^ENST00000278198.2" ; transcript_name "LRRC4C-201" ; transcript_support_level 1 ; transcript_type protein_coding
DCP2--LRRC4C HAVANA mRNA 31231 38702 . + . FI_gene_label "LRRC4C^ENSG00000148948.8" ; ID "DCP2--LRRC4C^ENST00000278198.2" ; Parent "DCP2--LRRC4C^LRRC4C^ENSG00000148948.8" ; ccdsid "CCDS31464.1" ; exon_id "ENSE00000988252.2" ; exon_number 2 ; gene_id "DCP2--LRRC4C^LRRC4C^ENSG00000148948.8" ; gene_name LRRC4C ; gene_type protein_coding ; havana_gene "OTTHUMG00000166383.5" ; havana_transcript "OTTHUMT00000389499.1" ; hgnc_id "HGNC:29317" ; level 2 ; orig_coord_info "chr11,40114373,40116292,-" ; protein_id "ENSP00000278198.1" ; tag basic appris_principal_1 CCDS ; transcript_id "DCP2--LRRC4C^ENST00000278198.2" ; transcript_name "LRRC4C-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
DCP2--LRRC4C HAVANA gene 1097 22346 . + . FI_gene_label "DCP2^ENSG00000172795.17" ; ID "DCP2--LRRC4C^DCP2^ENSG00000172795.17" ; ccdsid "CCDS34210.1" ; exon_id "ENSE00001261172.4" ; exon_number 1 ; gene_id "DCP2--LRRC4C^DCP2^ENSG00000172795.17" ; gene_name DCP2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000162853.6" ; havana_transcript "OTTHUMT00000370765.5" ; hgnc_id "HGNC:24452" ; level 2 ; orig_coord_info "chr5,112976934,112976986,+" ; protein_id "ENSP00000373715.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "DCP2--LRRC4C^ENST00000389063.3" ; transcript_name "DCP2-201" ; transcript_support_level 1 ; transcript_type protein_coding
DCP2--LRRC4C HAVANA mRNA 1097 22346 . + . FI_gene_label "DCP2^ENSG00000172795.17" ; ID "DCP2--LRRC4C^ENST00000389063.3" ; Parent "DCP2--LRRC4C^DCP2^ENSG00000172795.17" ; ccdsid "CCDS34210.1" ; exon_id "ENSE00001261172.4" ; exon_number 1 ; gene_id "DCP2--LRRC4C^DCP2^ENSG00000172795.17" ; gene_name DCP2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000162853.6" ; havana_transcript "OTTHUMT00000370765.5" ; hgnc_id "HGNC:24452" ; level 2 ; orig_coord_info "chr5,112976934,112976986,+" ; protein_id "ENSP00000373715.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "DCP2--LRRC4C^ENST00000389063.3" ; transcript_name "DCP2-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
FBXO11--DHX15 HAVANA gene 28043 48975 . + . FI_gene_label "DHX15^ENSG00000109606.13" ; ID "FBXO11--DHX15^DHX15^ENSG00000109606.13" ; ccdsid "CCDS33966.1" ; exon_id "ENSE00001388331.4" ; exon_number 1 ; gene_id "FBXO11--DHX15^DHX15^ENSG00000109606.13" ; gene_name DHX15 ; gene_type protein_coding ; havana_gene "OTTHUMG00000160304.2" ; havana_transcript "OTTHUMT00000360143.2" ; hgnc_id "HGNC:2738" ; level 2 ; orig_coord_info "chr4,24584323,24584393,-" ; protein_id "ENSP00000336741.4" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "FBXO11--DHX15^ENST00000336812.5" ; transcript_name "DHX15-201" ; transcript_support_level 1 ; transcript_type protein_coding
FBXO11--DHX15 HAVANA mRNA 28043 48975 . + . FI_gene_label "DHX15^ENSG00000109606.13" ; ID "FBXO11--DHX15^ENST00000336812.5" ; Parent "FBXO11--DHX15^DHX15^ENSG00000109606.13" ; ccdsid "CCDS33966.1" ; exon_id "ENSE00001388331.4" ; exon_number 1 ; gene_id "FBXO11--DHX15^DHX15^ENSG00000109606.13" ; gene_name DHX15 ; gene_type protein_coding ; havana_gene "OTTHUMG00000160304.2" ; havana_transcript "OTTHUMT00000360143.2" ; hgnc_id "HGNC:2738" ; level 2 ; orig_coord_info "chr4,24584323,24584393,-" ; protein_id "ENSP00000336741.4" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "FBXO11--DHX15^ENST00000336812.5" ; transcript_name "DHX15-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
FBXO11--DHX15 HAVANA gene 3407 23749 . + . FI_gene_label "FBXO11^ENSG00000138081.21" ; ID "FBXO11--DHX15^FBXO11^ENSG00000138081.21" ; ccdsid "CCDS1837.1" ; exon_id "ENSE00003723788.1" ; exon_number 2 ; gene_id "FBXO11--DHX15^FBXO11^ENSG00000138081.21" ; gene_name FBXO11 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129130.6" ; havana_transcript "OTTHUMT00000323727.1" ; hgnc_id "HGNC:13590" ; level 2 ; orig_coord_info "chr2,47839642,47839749,-" ; protein_id "ENSP00000385398.1" ; tag basic appris_principal_1 CCDS ; transcript_id "FBXO11--DHX15^ENST00000402508.5" ; transcript_name "FBXO11-201" ; transcript_support_level 1 ; transcript_type protein_coding
FBXO11--DHX15 HAVANA mRNA 3407 23749 . + . FI_gene_label "FBXO11^ENSG00000138081.21" ; ID "FBXO11--DHX15^ENST00000402508.5" ; Parent "FBXO11--DHX15^FBXO11^ENSG00000138081.21" ; ccdsid "CCDS1837.1" ; exon_id "ENSE00003723788.1" ; exon_number 2 ; gene_id "FBXO11--DHX15^FBXO11^ENSG00000138081.21" ; gene_name FBXO11 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129130.6" ; havana_transcript "OTTHUMT00000323727.1" ; hgnc_id "HGNC:13590" ; level 2 ; orig_coord_info "chr2,47839642,47839749,-" ; protein_id "ENSP00000385398.1" ; tag basic appris_principal_1 CCDS ; transcript_id "FBXO11--DHX15^ENST00000402508.5" ; transcript_name "FBXO11-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
FBXO11--PPARGC1A HAVANA gene 30357 56062 . + . FI_gene_label "PPARGC1A^ENSG00000109819.9" ; ID "FBXO11--PPARGC1A^PPARGC1A^ENSG00000109819.9" ; ccdsid "CCDS3429.1" ; exon_id "ENSE00003849976.1" ; exon_number 1 ; gene_id "FBXO11--PPARGC1A^PPARGC1A^ENSG00000109819.9" ; gene_name PPARGC1A ; gene_type protein_coding ; havana_gene "OTTHUMG00000097747.3" ; havana_transcript "OTTHUMT00000214976.2" ; hgnc_id "HGNC:9237" ; level 2 ; orig_coord_info "chr4,23889904,23889957,-" ; protein_id "ENSP00000264867.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "FBXO11--PPARGC1A^ENST00000264867.7" ; transcript_name "PPARGC1A-201" ; transcript_support_level 1 ; transcript_type protein_coding
FBXO11--PPARGC1A HAVANA mRNA 30357 56062 . + . FI_gene_label "PPARGC1A^ENSG00000109819.9" ; ID "FBXO11--PPARGC1A^ENST00000264867.7" ; Parent "FBXO11--PPARGC1A^PPARGC1A^ENSG00000109819.9" ; ccdsid "CCDS3429.1" ; exon_id "ENSE00003849976.1" ; exon_number 1 ; gene_id "FBXO11--PPARGC1A^PPARGC1A^ENSG00000109819.9" ; gene_name PPARGC1A ; gene_type protein_coding ; havana_gene "OTTHUMG00000097747.3" ; havana_transcript "OTTHUMT00000214976.2" ; hgnc_id "HGNC:9237" ; level 2 ; orig_coord_info "chr4,23889904,23889957,-" ; protein_id "ENSP00000264867.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "FBXO11--PPARGC1A^ENST00000264867.7" ; transcript_name "PPARGC1A-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
FBXO11--PPARGC1A HAVANA gene 3407 23749 . + . FI_gene_label "FBXO11^ENSG00000138081.21" ; ID "FBXO11--PPARGC1A^FBXO11^ENSG00000138081.21" ; ccdsid "CCDS1837.1" ; exon_id "ENSE00003723788.1" ; exon_number 2 ; gene_id "FBXO11--PPARGC1A^FBXO11^ENSG00000138081.21" ; gene_name FBXO11 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129130.6" ; havana_transcript "OTTHUMT00000323727.1" ; hgnc_id "HGNC:13590" ; level 2 ; orig_coord_info "chr2,47839642,47839749,-" ; protein_id "ENSP00000385398.1" ; tag basic appris_principal_1 CCDS ; transcript_id "FBXO11--PPARGC1A^ENST00000402508.5" ; transcript_name "FBXO11-201" ; transcript_support_level 1 ; transcript_type protein_coding
FBXO11--PPARGC1A HAVANA mRNA 3407 23749 . + . FI_gene_label "FBXO11^ENSG00000138081.21" ; ID "FBXO11--PPARGC1A^ENST00000402508.5" ; Parent "FBXO11--PPARGC1A^FBXO11^ENSG00000138081.21" ; ccdsid "CCDS1837.1" ; exon_id "ENSE00003723788.1" ; exon_number 2 ; gene_id "FBXO11--PPARGC1A^FBXO11^ENSG00000138081.21" ; gene_name FBXO11 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129130.6" ; havana_transcript "OTTHUMT00000323727.1" ; hgnc_id "HGNC:13590" ; level 2 ; orig_coord_info "chr2,47839642,47839749,-" ; protein_id "ENSP00000385398.1" ; tag basic appris_principal_1 CCDS ; transcript_id "FBXO11--PPARGC1A^ENST00000402508.5" ; transcript_name "FBXO11-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
FBXO25--AC240565.1 HAVANA gene 2640 15007 . + . FI_gene_label "FBXO25^ENSG00000147364.17" ; ID "FBXO25--AC240565.1^FBXO25^ENSG00000147364.17" ; ccdsid "CCDS5954.1" ; exon_id "ENSE00003460930.1" ; exon_number 2 ; gene_id "FBXO25--AC240565.1^FBXO25^ENSG00000147364.17" ; gene_name FBXO25 ; gene_type protein_coding ; havana_gene "OTTHUMG00000090341.8" ; havana_transcript "OTTHUMT00000206713.2" ; hgnc_id "HGNC:13596" ; level 2 ; orig_coord_info "chr8,431358,431444,+" ; protein_id "ENSP00000276326.6" ; tag basic CCDS ; transcript_id "FBXO25--AC240565.1^ENST00000276326.9" ; transcript_name "FBXO25-201" ; transcript_support_level 1 ; transcript_type protein_coding
FBXO25--AC240565.1 HAVANA mRNA 2640 15007 . + . FI_gene_label "FBXO25^ENSG00000147364.17" ; ID "FBXO25--AC240565.1^ENST00000276326.9" ; Parent "FBXO25--AC240565.1^FBXO25^ENSG00000147364.17" ; ccdsid "CCDS5954.1" ; exon_id "ENSE00003460930.1" ; exon_number 2 ; gene_id "FBXO25--AC240565.1^FBXO25^ENSG00000147364.17" ; gene_name FBXO25 ; gene_type protein_coding ; havana_gene "OTTHUMG00000090341.8" ; havana_transcript "OTTHUMT00000206713.2" ; hgnc_id "HGNC:13596" ; level 2 ; orig_coord_info "chr8,431358,431444,+" ; protein_id "ENSP00000276326.6" ; tag basic CCDS ; transcript_id "FBXO25--AC240565.1^ENST00000276326.9" ; transcript_name "FBXO25-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
GCN1--DNAJC16 HAVANA gene 1001 44712 . + . FI_gene_label "GCN1^ENSG00000089154.11" ; ID "GCN1--DNAJC16^GCN1^ENSG00000089154.11" ; ccdsid "CCDS41847.1" ; exon_id "ENSE00001260563.3" ; exon_number 1 ; gene_id "GCN1--DNAJC16^GCN1^ENSG00000089154.11" ; gene_name GCN1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000169338.3" ; havana_transcript "OTTHUMT00000403592.3" ; hgnc_id "HGNC:4199" ; level 2 ; orig_coord_info "chr12,120194680,120194697,-" ; protein_id "ENSP00000300648.6" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "GCN1--DNAJC16^ENST00000300648.7" ; transcript_name "GCN1-201" ; transcript_support_level 1 ; transcript_type protein_coding
GCN1--DNAJC16 HAVANA mRNA 1001 44712 . + . FI_gene_label "GCN1^ENSG00000089154.11" ; ID "GCN1--DNAJC16^ENST00000300648.7" ; Parent "GCN1--DNAJC16^GCN1^ENSG00000089154.11" ; ccdsid "CCDS41847.1" ; exon_id "ENSE00001260563.3" ; exon_number 1 ; gene_id "GCN1--DNAJC16^GCN1^ENSG00000089154.11" ; gene_name GCN1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000169338.3" ; havana_transcript "OTTHUMT00000403592.3" ; hgnc_id "HGNC:4199" ; level 2 ; orig_coord_info "chr12,120194680,120194697,-" ; protein_id "ENSP00000300648.6" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "GCN1--DNAJC16^ENST00000300648.7" ; transcript_name "GCN1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
GCN1--DNAJC16 HAVANA gene 47713 61554 . + . FI_gene_label "DNAJC16^ENSG00000116138.13" ; ID "GCN1--DNAJC16^DNAJC16^ENSG00000116138.13" ; exon_id "ENSE00002151398.1" ; exon_number 2 ; gene_id "GCN1--DNAJC16^DNAJC16^ENSG00000116138.13" ; gene_name DNAJC16 ; gene_type protein_coding ; havana_gene "OTTHUMG00000002358.4" ; havana_transcript "OTTHUMT00000006765.1" ; hgnc_id "HGNC:29157" ; level 2 ; orig_coord_info "chr1,15529106,15529272,+" ; protein_id "ENSP00000364998.1" ; tag basic ; transcript_id "GCN1--DNAJC16^ENST00000375838.5" ; transcript_name "DNAJC16-201" ; transcript_support_level 5 ; transcript_type protein_coding
GCN1--DNAJC16 HAVANA mRNA 47713 61554 . + . FI_gene_label "DNAJC16^ENSG00000116138.13" ; ID "GCN1--DNAJC16^ENST00000375838.5" ; Parent "GCN1--DNAJC16^DNAJC16^ENSG00000116138.13" ; exon_id "ENSE00002151398.1" ; exon_number 2 ; gene_id "GCN1--DNAJC16^DNAJC16^ENSG00000116138.13" ; gene_name DNAJC16 ; gene_type protein_coding ; havana_gene "OTTHUMG00000002358.4" ; havana_transcript "OTTHUMT00000006765.1" ; hgnc_id "HGNC:29157" ; level 2 ; orig_coord_info "chr1,15529106,15529272,+" ; protein_id "ENSP00000364998.1" ; tag basic ; transcript_id "GCN1--DNAJC16^ENST00000375838.5" ; transcript_name "DNAJC16-201" ; transcript_support_level 5 ; transcript_type protein_coding
L1 and L2 created:
GFPT1--MAK HAVANA gene 30076 49572 . + . FI_gene_label "MAK^ENSG00000111837.12" ; ID "GFPT1--MAK^MAK^ENSG00000111837.12" ; ccdsid "CCDS4516.1" ; exon_id "ENSE00003696993.1" ; exon_number 2 ; gene_id "GFPT1--MAK^MAK^ENSG00000111837.12" ; gene_name MAK ; gene_type protein_coding ; havana_gene "OTTHUMG00000014247.3" ; havana_transcript "OTTHUMT00000039841.1" ; hgnc_id "HGNC:6816" ; level 2 ; orig_coord_info "chr6,10830548,10830648,-" ; protein_id "ENSP00000313021.2" ; tag basic appris_principal_4 CCDS ; transcript_id "GFPT1--MAK^ENST00000313243.6" ; transcript_name "MAK-201" ; transcript_support_level 5 ; transcript_type protein_coding
GFPT1--MAK HAVANA mRNA 30076 49572 . + . FI_gene_label "MAK^ENSG00000111837.12" ; ID "GFPT1--MAK^ENST00000313243.6" ; Parent "GFPT1--MAK^MAK^ENSG00000111837.12" ; ccdsid "CCDS4516.1" ; exon_id "ENSE00003696993.1" ; exon_number 2 ; gene_id "GFPT1--MAK^MAK^ENSG00000111837.12" ; gene_name MAK ; gene_type protein_coding ; havana_gene "OTTHUMG00000014247.3" ; havana_transcript "OTTHUMT00000039841.1" ; hgnc_id "HGNC:6816" ; level 2 ; orig_coord_info "chr6,10830548,10830648,-" ; protein_id "ENSP00000313021.2" ; tag basic appris_principal_4 CCDS ; transcript_id "GFPT1--MAK^ENST00000313243.6" ; transcript_name "MAK-201" ; transcript_support_level 5 ; transcript_type protein_coding
L1 and L2 created:
GFPT1--MAK HAVANA gene 1024 27017 . + . FI_gene_label "GFPT1^ENSG00000198380.13" ; ID "GFPT1--MAK^GFPT1^ENSG00000198380.13" ; ccdsid "CCDS58713.1" ; exon_id "ENSE00003470909.3" ; exon_number 1 ; gene_id "GFPT1--MAK^GFPT1^ENSG00000198380.13" ; gene_name GFPT1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000152666.5" ; havana_transcript "OTTHUMT00000327277.3" ; hgnc_id "HGNC:4241" ; level 2 ; orig_coord_info "chr2,69387065,69387071,-" ; protein_id "ENSP00000349860.4" ; tag CAGE_supported_TSS RNA_Seq_supported_partial basic MANE_Select CCDS ; transcript_id "GFPT1--MAK^ENST00000357308.9" ; transcript_name "GFPT1-201" ; transcript_support_level 5 ; transcript_type protein_coding
GFPT1--MAK HAVANA mRNA 1024 27017 . + . FI_gene_label "GFPT1^ENSG00000198380.13" ; ID "GFPT1--MAK^ENST00000357308.9" ; Parent "GFPT1--MAK^GFPT1^ENSG00000198380.13" ; ccdsid "CCDS58713.1" ; exon_id "ENSE00003470909.3" ; exon_number 1 ; gene_id "GFPT1--MAK^GFPT1^ENSG00000198380.13" ; gene_name GFPT1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000152666.5" ; havana_transcript "OTTHUMT00000327277.3" ; hgnc_id "HGNC:4241" ; level 2 ; orig_coord_info "chr2,69387065,69387071,-" ; protein_id "ENSP00000349860.4" ; tag CAGE_supported_TSS RNA_Seq_supported_partial basic MANE_Select CCDS ; transcript_id "GFPT1--MAK^ENST00000357308.9" ; transcript_name "GFPT1-201" ; transcript_support_level 5 ; transcript_type protein_coding
L1 and L2 created:
GTF2A1L--STON1-GTF2A1L HAVANA gene 1059 10137 . + . FI_gene_label "GTF2A1L^ENSG00000242441.8" ; ID "GTF2A1L--STON1-GTF2A1L^GTF2A1L^ENSG00000242441.8" ; ccdsid "CCDS46281.1" ; exon_id "ENSE00001939761.2" ; exon_number 1 ; gene_id "GTF2A1L--STON1-GTF2A1L^GTF2A1L^ENSG00000242441.8" ; gene_name GTF2A1L ; gene_type protein_coding ; havana_gene "OTTHUMG00000152038.17" ; havana_transcript "OTTHUMT00000323852.5" ; hgnc_id "HGNC:30727" ; level 2 ; orig_coord_info "chr2,48617875,48617895,+" ; protein_id "ENSP00000384597.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "GTF2A1L--STON1-GTF2A1L^ENST00000403751.8" ; transcript_name "GTF2A1L-201" ; transcript_support_level 1 ; transcript_type protein_coding
GTF2A1L--STON1-GTF2A1L HAVANA mRNA 1059 10137 . + . FI_gene_label "GTF2A1L^ENSG00000242441.8" ; ID "GTF2A1L--STON1-GTF2A1L^ENST00000403751.8" ; Parent "GTF2A1L--STON1-GTF2A1L^GTF2A1L^ENSG00000242441.8" ; ccdsid "CCDS46281.1" ; exon_id "ENSE00001939761.2" ; exon_number 1 ; gene_id "GTF2A1L--STON1-GTF2A1L^GTF2A1L^ENSG00000242441.8" ; gene_name GTF2A1L ; gene_type protein_coding ; havana_gene "OTTHUMG00000152038.17" ; havana_transcript "OTTHUMT00000323852.5" ; hgnc_id "HGNC:30727" ; level 2 ; orig_coord_info "chr2,48617875,48617895,+" ; protein_id "ENSP00000384597.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "GTF2A1L--STON1-GTF2A1L^ENST00000403751.8" ; transcript_name "GTF2A1L-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
HLCS--RWDD2B HAVANA gene 1001 23299 . + . FI_gene_label "HLCS^ENSG00000159267.16" ; ID "HLCS--RWDD2B^HLCS^ENSG00000159267.16" ; ccdsid "CCDS13647.1" ; exon_id "ENSE00001282204.4" ; exon_number 4 ; gene_id "HLCS--RWDD2B^HLCS^ENSG00000159267.16" ; gene_name HLCS ; gene_type protein_coding ; havana_gene "OTTHUMG00000086636.4" ; havana_transcript "OTTHUMT00000194686.2" ; hgnc_id "HGNC:4976" ; level 2 ; orig_coord_info "chr21,36938832,36938883,-" ; protein_id "ENSP00000338387.3" ; tag basic appris_principal_1 CCDS ; transcript_id "HLCS--RWDD2B^ENST00000336648.8" ; transcript_name "HLCS-201" ; transcript_support_level 1 ; transcript_type protein_coding
HLCS--RWDD2B HAVANA mRNA 1001 23299 . + . FI_gene_label "HLCS^ENSG00000159267.16" ; ID "HLCS--RWDD2B^ENST00000336648.8" ; Parent "HLCS--RWDD2B^HLCS^ENSG00000159267.16" ; ccdsid "CCDS13647.1" ; exon_id "ENSE00001282204.4" ; exon_number 4 ; gene_id "HLCS--RWDD2B^HLCS^ENSG00000159267.16" ; gene_name HLCS ; gene_type protein_coding ; havana_gene "OTTHUMG00000086636.4" ; havana_transcript "OTTHUMT00000194686.2" ; hgnc_id "HGNC:4976" ; level 2 ; orig_coord_info "chr21,36938832,36938883,-" ; protein_id "ENSP00000338387.3" ; tag basic appris_principal_1 CCDS ; transcript_id "HLCS--RWDD2B^ENST00000336648.8" ; transcript_name "HLCS-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
HLCS--RWDD2B HAVANA gene 28573 34911 . + . FI_gene_label "RWDD2B^ENSG00000156253.7" ; ID "HLCS--RWDD2B^RWDD2B^ENSG00000156253.7" ; ccdsid "CCDS13582.1" ; exon_id "ENSE00001025429.3" ; exon_number 1 ; gene_id "HLCS--RWDD2B^RWDD2B^ENSG00000156253.7" ; gene_name RWDD2B ; gene_type protein_coding ; havana_gene "OTTHUMG00000078805.3" ; havana_transcript "OTTHUMT00000171858.2" ; hgnc_id "HGNC:1302" ; level 2 ; orig_coord_info "chr21,29019211,29019277,-" ; protein_id "ENSP00000418693.1" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "HLCS--RWDD2B^ENST00000493196.2" ; transcript_name "RWDD2B-207" ; transcript_support_level 1 ; transcript_type protein_coding
HLCS--RWDD2B HAVANA mRNA 28573 34911 . + . FI_gene_label "RWDD2B^ENSG00000156253.7" ; ID "HLCS--RWDD2B^ENST00000493196.2" ; Parent "HLCS--RWDD2B^RWDD2B^ENSG00000156253.7" ; ccdsid "CCDS13582.1" ; exon_id "ENSE00001025429.3" ; exon_number 1 ; gene_id "HLCS--RWDD2B^RWDD2B^ENSG00000156253.7" ; gene_name RWDD2B ; gene_type protein_coding ; havana_gene "OTTHUMG00000078805.3" ; havana_transcript "OTTHUMT00000171858.2" ; hgnc_id "HGNC:1302" ; level 2 ; orig_coord_info "chr21,29019211,29019277,-" ; protein_id "ENSP00000418693.1" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "HLCS--RWDD2B^ENST00000493196.2" ; transcript_name "RWDD2B-207" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
KALRN--AC092266.1 HAVANA gene 3729 51943 . + . FI_gene_label "KALRN^ENSG00000160145.15" ; ID "KALRN--AC092266.1^KALRN^ENSG00000160145.15" ; ccdsid "CCDS3027.1" ; exon_id "ENSE00001813225.1" ; exon_number 1 ; gene_id "KALRN--AC092266.1^KALRN^ENSG00000160145.15" ; gene_name KALRN ; gene_type protein_coding ; havana_gene "OTTHUMG00000125545.14" ; havana_transcript "OTTHUMT00000258843.4" ; hgnc_id "HGNC:4814" ; level 2 ; orig_coord_info "chr3,124094838,124094904,+" ; protein_id "ENSP00000240874.3" ; tag basic CCDS ; transcript_id "KALRN--AC092266.1^ENST00000240874.7" ; transcript_name "KALRN-201" ; transcript_support_level 1 ; transcript_type protein_coding
KALRN--AC092266.1 HAVANA mRNA 3729 51943 . + . FI_gene_label "KALRN^ENSG00000160145.15" ; ID "KALRN--AC092266.1^ENST00000240874.7" ; Parent "KALRN--AC092266.1^KALRN^ENSG00000160145.15" ; ccdsid "CCDS3027.1" ; exon_id "ENSE00001813225.1" ; exon_number 1 ; gene_id "KALRN--AC092266.1^KALRN^ENSG00000160145.15" ; gene_name KALRN ; gene_type protein_coding ; havana_gene "OTTHUMG00000125545.14" ; havana_transcript "OTTHUMT00000258843.4" ; hgnc_id "HGNC:4814" ; level 2 ; orig_coord_info "chr3,124094838,124094904,+" ; protein_id "ENSP00000240874.3" ; tag basic CCDS ; transcript_id "KALRN--AC092266.1^ENST00000240874.7" ; transcript_name "KALRN-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
KALRN--LSINCT5 HAVANA gene 3729 51943 . + . FI_gene_label "KALRN^ENSG00000160145.15" ; ID "KALRN--LSINCT5^KALRN^ENSG00000160145.15" ; ccdsid "CCDS3027.1" ; exon_id "ENSE00001813225.1" ; exon_number 1 ; gene_id "KALRN--LSINCT5^KALRN^ENSG00000160145.15" ; gene_name KALRN ; gene_type protein_coding ; havana_gene "OTTHUMG00000125545.14" ; havana_transcript "OTTHUMT00000258843.4" ; hgnc_id "HGNC:4814" ; level 2 ; orig_coord_info "chr3,124094838,124094904,+" ; protein_id "ENSP00000240874.3" ; tag basic CCDS ; transcript_id "KALRN--LSINCT5^ENST00000240874.7" ; transcript_name "KALRN-201" ; transcript_support_level 1 ; transcript_type protein_coding
KALRN--LSINCT5 HAVANA mRNA 3729 51943 . + . FI_gene_label "KALRN^ENSG00000160145.15" ; ID "KALRN--LSINCT5^ENST00000240874.7" ; Parent "KALRN--LSINCT5^KALRN^ENSG00000160145.15" ; ccdsid "CCDS3027.1" ; exon_id "ENSE00001813225.1" ; exon_number 1 ; gene_id "KALRN--LSINCT5^KALRN^ENSG00000160145.15" ; gene_name KALRN ; gene_type protein_coding ; havana_gene "OTTHUMG00000125545.14" ; havana_transcript "OTTHUMT00000258843.4" ; hgnc_id "HGNC:4814" ; level 2 ; orig_coord_info "chr3,124094838,124094904,+" ; protein_id "ENSP00000240874.3" ; tag basic CCDS ; transcript_id "KALRN--LSINCT5^ENST00000240874.7" ; transcript_name "KALRN-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
MAK--PDE4D HAVANA gene 41882 74757 . + . FI_gene_label "PDE4D^ENSG00000113448.19" ; ID "MAK--PDE4D^PDE4D^ENSG00000113448.19" ; exon_id "ENSE00001558796.1" ; exon_number 1 ; gene_id "MAK--PDE4D^PDE4D^ENSG00000113448.19" ; gene_name PDE4D ; gene_type protein_coding ; havana_gene "OTTHUMG00000162218.9" ; havana_transcript "OTTHUMT00000368104.1" ; hgnc_id "HGNC:8783" ; level 2 ; orig_coord_info "chr5,59768247,59768509,-" ; protein_id "ENSP00000308485.6" ; transcript_id "MAK--PDE4D^ENST00000309641.10" ; transcript_name "PDE4D-201" ; transcript_support_level 1 ; transcript_type nonsense_mediated_decay
MAK--PDE4D HAVANA mRNA 41882 74757 . + . FI_gene_label "PDE4D^ENSG00000113448.19" ; ID "MAK--PDE4D^ENST00000309641.10" ; Parent "MAK--PDE4D^PDE4D^ENSG00000113448.19" ; exon_id "ENSE00001558796.1" ; exon_number 1 ; gene_id "MAK--PDE4D^PDE4D^ENSG00000113448.19" ; gene_name PDE4D ; gene_type protein_coding ; havana_gene "OTTHUMG00000162218.9" ; havana_transcript "OTTHUMT00000368104.1" ; hgnc_id "HGNC:8783" ; level 2 ; orig_coord_info "chr5,59768247,59768509,-" ; protein_id "ENSP00000308485.6" ; transcript_id "MAK--PDE4D^ENST00000309641.10" ; transcript_name "PDE4D-201" ; transcript_support_level 1 ; transcript_type nonsense_mediated_decay
L1 and L2 created:
MAK--PDE4D HAVANA gene 1059 20555 . + . FI_gene_label "MAK^ENSG00000111837.12" ; ID "MAK--PDE4D^MAK^ENSG00000111837.12" ; ccdsid "CCDS4516.1" ; exon_id "ENSE00003696993.1" ; exon_number 2 ; gene_id "MAK--PDE4D^MAK^ENSG00000111837.12" ; gene_name MAK ; gene_type protein_coding ; havana_gene "OTTHUMG00000014247.3" ; havana_transcript "OTTHUMT00000039841.1" ; hgnc_id "HGNC:6816" ; level 2 ; orig_coord_info "chr6,10830548,10830648,-" ; protein_id "ENSP00000313021.2" ; tag basic appris_principal_4 CCDS ; transcript_id "MAK--PDE4D^ENST00000313243.6" ; transcript_name "MAK-201" ; transcript_support_level 5 ; transcript_type protein_coding
MAK--PDE4D HAVANA mRNA 1059 20555 . + . FI_gene_label "MAK^ENSG00000111837.12" ; ID "MAK--PDE4D^ENST00000313243.6" ; Parent "MAK--PDE4D^MAK^ENSG00000111837.12" ; ccdsid "CCDS4516.1" ; exon_id "ENSE00003696993.1" ; exon_number 2 ; gene_id "MAK--PDE4D^MAK^ENSG00000111837.12" ; gene_name MAK ; gene_type protein_coding ; havana_gene "OTTHUMG00000014247.3" ; havana_transcript "OTTHUMT00000039841.1" ; hgnc_id "HGNC:6816" ; level 2 ; orig_coord_info "chr6,10830548,10830648,-" ; protein_id "ENSP00000313021.2" ; tag basic appris_principal_4 CCDS ; transcript_id "MAK--PDE4D^ENST00000313243.6" ; transcript_name "MAK-201" ; transcript_support_level 5 ; transcript_type protein_coding
L1 and L2 created:
MTRR--CPNE4 HAVANA gene 5080 25402 . + . FI_gene_label "MTRR^ENSG00000124275.15" ; ID "MTRR--CPNE4^MTRR^ENSG00000124275.15" ; exon_id "ENSE00000846013.3" ; exon_number 1 ; gene_id "MTRR--CPNE4^MTRR^ENSG00000124275.15" ; gene_name MTRR ; gene_type protein_coding ; havana_gene "OTTHUMG00000090477.4" ; havana_transcript "OTTHUMT00000206931.1" ; hgnc_id "HGNC:7473" ; level 2 ; orig_coord_info "chr5,7869134,7869189,+" ; protein_id "ENSP00000264668.2" ; tag basic appris_alternative_2 ; transcript_id "MTRR--CPNE4^ENST00000264668.6" ; transcript_name "MTRR-201" ; transcript_support_level 1 ; transcript_type protein_coding
MTRR--CPNE4 HAVANA mRNA 5080 25402 . + . FI_gene_label "MTRR^ENSG00000124275.15" ; ID "MTRR--CPNE4^ENST00000264668.6" ; Parent "MTRR--CPNE4^MTRR^ENSG00000124275.15" ; exon_id "ENSE00000846013.3" ; exon_number 1 ; gene_id "MTRR--CPNE4^MTRR^ENSG00000124275.15" ; gene_name MTRR ; gene_type protein_coding ; havana_gene "OTTHUMG00000090477.4" ; havana_transcript "OTTHUMT00000206931.1" ; hgnc_id "HGNC:7473" ; level 2 ; orig_coord_info "chr5,7869134,7869189,+" ; protein_id "ENSP00000264668.2" ; tag basic appris_alternative_2 ; transcript_id "MTRR--CPNE4^ENST00000264668.6" ; transcript_name "MTRR-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
MTRR--CPNE4 ENSEMBL gene 36302 59258 . + . FI_gene_label "CPNE4^ENSG00000196353.11" ; ID "MTRR--CPNE4^CPNE4^ENSG00000196353.11" ; ccdsid "CCDS3072.1" ; exon_id "ENSE00003536115.1" ; exon_number 2 ; gene_id "MTRR--CPNE4^CPNE4^ENSG00000196353.11" ; gene_name CPNE4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000159631.14" ; hgnc_id "HGNC:2317" ; level 3 ; orig_coord_info "chr3,131905264,131905443,-" ; protein_id "ENSP00000411904.1" ; tag basic appris_principal_1 CCDS ; transcript_id "MTRR--CPNE4^ENST00000429747.5" ; transcript_name "CPNE4-201" ; transcript_support_level 1 ; transcript_type protein_coding
MTRR--CPNE4 ENSEMBL mRNA 36302 59258 . + . FI_gene_label "CPNE4^ENSG00000196353.11" ; ID "MTRR--CPNE4^ENST00000429747.5" ; Parent "MTRR--CPNE4^CPNE4^ENSG00000196353.11" ; ccdsid "CCDS3072.1" ; exon_id "ENSE00003536115.1" ; exon_number 2 ; gene_id "MTRR--CPNE4^CPNE4^ENSG00000196353.11" ; gene_name CPNE4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000159631.14" ; hgnc_id "HGNC:2317" ; level 3 ; orig_coord_info "chr3,131905264,131905443,-" ; protein_id "ENSP00000411904.1" ; tag basic appris_principal_1 CCDS ; transcript_id "MTRR--CPNE4^ENST00000429747.5" ; transcript_name "CPNE4-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PATJ--PGLYRP2 HAVANA gene 64940 70697 . + . FI_gene_label "PGLYRP2^ENSG00000161031.13" ; ID "PATJ--PGLYRP2^PGLYRP2^ENSG00000161031.13" ; ccdsid "CCDS86718.1" ; exon_id "ENSE00003098255.1" ; exon_number 1 ; gene_id "PATJ--PGLYRP2^PGLYRP2^ENSG00000161031.13" ; gene_name PGLYRP2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000150690.5" ; havana_transcript "OTTHUMT00000461335.2" ; hgnc_id "HGNC:30013" ; level 2 ; orig_coord_info "chr19,15479311,15479371,-" ; protein_id "ENSP00000292609.3" ; tag CAGE_supported_TSS retained_intron_final basic appris_principal_4 CCDS ; transcript_id "PATJ--PGLYRP2^ENST00000292609.8" ; transcript_name "PGLYRP2-201" ; transcript_support_level 1 ; transcript_type protein_coding
PATJ--PGLYRP2 HAVANA mRNA 64940 70697 . + . FI_gene_label "PGLYRP2^ENSG00000161031.13" ; ID "PATJ--PGLYRP2^ENST00000292609.8" ; Parent "PATJ--PGLYRP2^PGLYRP2^ENSG00000161031.13" ; ccdsid "CCDS86718.1" ; exon_id "ENSE00003098255.1" ; exon_number 1 ; gene_id "PATJ--PGLYRP2^PGLYRP2^ENSG00000161031.13" ; gene_name PGLYRP2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000150690.5" ; havana_transcript "OTTHUMT00000461335.2" ; hgnc_id "HGNC:30013" ; level 2 ; orig_coord_info "chr19,15479311,15479371,-" ; protein_id "ENSP00000292609.3" ; tag CAGE_supported_TSS retained_intron_final basic appris_principal_4 CCDS ; transcript_id "PATJ--PGLYRP2^ENST00000292609.8" ; transcript_name "PGLYRP2-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PATJ--PGLYRP2 HAVANA gene 33634 48200 . + . FI_gene_label "PATJ^ENSG00000132849.21" ; ID "PATJ--PGLYRP2^PATJ^ENSG00000132849.21" ; exon_id "ENSE00001716531.2" ; exon_number 1 ; gene_id "PATJ--PGLYRP2^PATJ^ENSG00000132849.21" ; gene_name PATJ ; gene_type protein_coding ; havana_gene "OTTHUMG00000008560.10" ; havana_transcript "OTTHUMT00000488269.2" ; hgnc_id "HGNC:28881" ; level 2 ; orig_coord_info "chr1,61952390,61952411,+" ; protein_id "ENSP00000307496.8" ; tag basic ; transcript_id "PATJ--PGLYRP2^ENST00000307297.8" ; transcript_name "PATJ-201" ; transcript_support_level 2 ; transcript_type protein_coding
PATJ--PGLYRP2 HAVANA mRNA 33634 48200 . + . FI_gene_label "PATJ^ENSG00000132849.21" ; ID "PATJ--PGLYRP2^ENST00000307297.8" ; Parent "PATJ--PGLYRP2^PATJ^ENSG00000132849.21" ; exon_id "ENSE00001716531.2" ; exon_number 1 ; gene_id "PATJ--PGLYRP2^PATJ^ENSG00000132849.21" ; gene_name PATJ ; gene_type protein_coding ; havana_gene "OTTHUMG00000008560.10" ; havana_transcript "OTTHUMT00000488269.2" ; hgnc_id "HGNC:28881" ; level 2 ; orig_coord_info "chr1,61952390,61952411,+" ; protein_id "ENSP00000307496.8" ; tag basic ; transcript_id "PATJ--PGLYRP2^ENST00000307297.8" ; transcript_name "PATJ-201" ; transcript_support_level 2 ; transcript_type protein_coding
L1 and L2 created:
PCDHA11--PCDHA13 HAVANA gene 7419 15859 . + . FI_gene_label "PCDHA13^ENSG00000239389.8" ; ID "PCDHA11--PCDHA13^PCDHA13^ENSG00000239389.8" ; ccdsid "CCDS4240.1" ; exon_id "ENSE00001038419.2" ; exon_number 1 ; gene_id "PCDHA11--PCDHA13^PCDHA13^ENSG00000239389.8" ; gene_name PCDHA13 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129614.4" ; havana_transcript "OTTHUMT00000335000.2" ; hgnc_id "HGNC:8667" ; level 2 ; orig_coord_info "chr5,140882269,140884662,+" ; protein_id "ENSP00000289272.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHA11--PCDHA13^ENST00000289272.3" ; transcript_name "PCDHA13-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHA11--PCDHA13 HAVANA mRNA 7419 15859 . + . FI_gene_label "PCDHA13^ENSG00000239389.8" ; ID "PCDHA11--PCDHA13^ENST00000289272.3" ; Parent "PCDHA11--PCDHA13^PCDHA13^ENSG00000239389.8" ; ccdsid "CCDS4240.1" ; exon_id "ENSE00001038419.2" ; exon_number 1 ; gene_id "PCDHA11--PCDHA13^PCDHA13^ENSG00000239389.8" ; gene_name PCDHA13 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129614.4" ; havana_transcript "OTTHUMT00000335000.2" ; hgnc_id "HGNC:8667" ; level 2 ; orig_coord_info "chr5,140882269,140884662,+" ; protein_id "ENSP00000289272.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHA11--PCDHA13^ENST00000289272.3" ; transcript_name "PCDHA13-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHA11--PCDHA13 HAVANA gene 1001 4418 . + . FI_gene_label "PCDHA11^ENSG00000249158.7" ; ID "PCDHA11--PCDHA13^PCDHA11^ENSG00000249158.7" ; ccdsid "CCDS75326.1" ; exon_id "ENSE00003719125.1" ; exon_number 1 ; gene_id "PCDHA11--PCDHA13^PCDHA11^ENSG00000249158.7" ; gene_name PCDHA11 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163369.3" ; havana_transcript "OTTHUMT00000477577.1" ; hgnc_id "HGNC:8665" ; level 2 ; orig_coord_info "chr5,140869104,140871533,+" ; protein_id "ENSP00000482503.1" ; tag basic CCDS ; transcript_id "PCDHA11--PCDHA13^ENST00000616325.1" ; transcript_name "PCDHA11-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHA11--PCDHA13 HAVANA mRNA 1001 4418 . + . FI_gene_label "PCDHA11^ENSG00000249158.7" ; ID "PCDHA11--PCDHA13^ENST00000616325.1" ; Parent "PCDHA11--PCDHA13^PCDHA11^ENSG00000249158.7" ; ccdsid "CCDS75326.1" ; exon_id "ENSE00003719125.1" ; exon_number 1 ; gene_id "PCDHA11--PCDHA13^PCDHA11^ENSG00000249158.7" ; gene_name PCDHA11 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163369.3" ; havana_transcript "OTTHUMT00000477577.1" ; hgnc_id "HGNC:8665" ; level 2 ; orig_coord_info "chr5,140869104,140871533,+" ; protein_id "ENSP00000482503.1" ; tag basic CCDS ; transcript_id "PCDHA11--PCDHA13^ENST00000616325.1" ; transcript_name "PCDHA11-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHA11--PCDHAC1 HAVANA gene 7419 17434 . + . FI_gene_label "PCDHAC1^ENSG00000248383.5" ; ID "PCDHA11--PCDHAC1^PCDHAC1^ENSG00000248383.5" ; ccdsid "CCDS4241.1" ; exon_id "ENSE00001085780.5" ; exon_number 1 ; gene_id "PCDHA11--PCDHAC1^PCDHAC1^ENSG00000248383.5" ; gene_name PCDHAC1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129603.3" ; havana_transcript "OTTHUMT00000251798.1" ; hgnc_id "HGNC:8676" ; level 2 ; orig_coord_info "chr5,140926893,140929325,+" ; protein_id "ENSP00000253807.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHA11--PCDHAC1^ENST00000253807.3" ; transcript_name "PCDHAC1-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHA11--PCDHAC1 HAVANA mRNA 7419 17434 . + . FI_gene_label "PCDHAC1^ENSG00000248383.5" ; ID "PCDHA11--PCDHAC1^ENST00000253807.3" ; Parent "PCDHA11--PCDHAC1^PCDHAC1^ENSG00000248383.5" ; ccdsid "CCDS4241.1" ; exon_id "ENSE00001085780.5" ; exon_number 1 ; gene_id "PCDHA11--PCDHAC1^PCDHAC1^ENSG00000248383.5" ; gene_name PCDHAC1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129603.3" ; havana_transcript "OTTHUMT00000251798.1" ; hgnc_id "HGNC:8676" ; level 2 ; orig_coord_info "chr5,140926893,140929325,+" ; protein_id "ENSP00000253807.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHA11--PCDHAC1^ENST00000253807.3" ; transcript_name "PCDHAC1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHA11--PCDHAC1 HAVANA gene 1001 4418 . + . FI_gene_label "PCDHA11^ENSG00000249158.7" ; ID "PCDHA11--PCDHAC1^PCDHA11^ENSG00000249158.7" ; ccdsid "CCDS75326.1" ; exon_id "ENSE00003719125.1" ; exon_number 1 ; gene_id "PCDHA11--PCDHAC1^PCDHA11^ENSG00000249158.7" ; gene_name PCDHA11 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163369.3" ; havana_transcript "OTTHUMT00000477577.1" ; hgnc_id "HGNC:8665" ; level 2 ; orig_coord_info "chr5,140869104,140871533,+" ; protein_id "ENSP00000482503.1" ; tag basic CCDS ; transcript_id "PCDHA11--PCDHAC1^ENST00000616325.1" ; transcript_name "PCDHA11-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHA11--PCDHAC1 HAVANA mRNA 1001 4418 . + . FI_gene_label "PCDHA11^ENSG00000249158.7" ; ID "PCDHA11--PCDHAC1^ENST00000616325.1" ; Parent "PCDHA11--PCDHAC1^PCDHA11^ENSG00000249158.7" ; ccdsid "CCDS75326.1" ; exon_id "ENSE00003719125.1" ; exon_number 1 ; gene_id "PCDHA11--PCDHAC1^PCDHA11^ENSG00000249158.7" ; gene_name PCDHA11 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163369.3" ; havana_transcript "OTTHUMT00000477577.1" ; hgnc_id "HGNC:8665" ; level 2 ; orig_coord_info "chr5,140869104,140871533,+" ; protein_id "ENSP00000482503.1" ; tag basic CCDS ; transcript_id "PCDHA11--PCDHAC1^ENST00000616325.1" ; transcript_name "PCDHA11-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHA11--PCDHAC2 HAVANA gene 7425 18160 . + . FI_gene_label "PCDHAC2^ENSG00000243232.6" ; ID "PCDHA11--PCDHAC2^PCDHAC2^ENSG00000243232.6" ; ccdsid "CCDS4242.1" ; exon_id "ENSE00001038414.4" ; exon_number 1 ; gene_id "PCDHA11--PCDHAC2^PCDHAC2^ENSG00000243232.6" ; gene_name PCDHAC2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129607.7" ; havana_transcript "OTTHUMT00000251802.4" ; hgnc_id "HGNC:8677" ; level 2 ; orig_coord_info "chr5,140966767,140969331,+" ; protein_id "ENSP00000289269.5" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHA11--PCDHAC2^ENST00000289269.7" ; transcript_name "PCDHAC2-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHA11--PCDHAC2 HAVANA mRNA 7425 18160 . + . FI_gene_label "PCDHAC2^ENSG00000243232.6" ; ID "PCDHA11--PCDHAC2^ENST00000289269.7" ; Parent "PCDHA11--PCDHAC2^PCDHAC2^ENSG00000243232.6" ; ccdsid "CCDS4242.1" ; exon_id "ENSE00001038414.4" ; exon_number 1 ; gene_id "PCDHA11--PCDHAC2^PCDHAC2^ENSG00000243232.6" ; gene_name PCDHAC2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129607.7" ; havana_transcript "OTTHUMT00000251802.4" ; hgnc_id "HGNC:8677" ; level 2 ; orig_coord_info "chr5,140966767,140969331,+" ; protein_id "ENSP00000289269.5" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHA11--PCDHAC2^ENST00000289269.7" ; transcript_name "PCDHAC2-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHA11--PCDHAC2 HAVANA gene 1001 4418 . + . FI_gene_label "PCDHA11^ENSG00000249158.7" ; ID "PCDHA11--PCDHAC2^PCDHA11^ENSG00000249158.7" ; ccdsid "CCDS75326.1" ; exon_id "ENSE00003719125.1" ; exon_number 1 ; gene_id "PCDHA11--PCDHAC2^PCDHA11^ENSG00000249158.7" ; gene_name PCDHA11 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163369.3" ; havana_transcript "OTTHUMT00000477577.1" ; hgnc_id "HGNC:8665" ; level 2 ; orig_coord_info "chr5,140869104,140871533,+" ; protein_id "ENSP00000482503.1" ; tag basic CCDS ; transcript_id "PCDHA11--PCDHAC2^ENST00000616325.1" ; transcript_name "PCDHA11-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHA11--PCDHAC2 HAVANA mRNA 1001 4418 . + . FI_gene_label "PCDHA11^ENSG00000249158.7" ; ID "PCDHA11--PCDHAC2^ENST00000616325.1" ; Parent "PCDHA11--PCDHAC2^PCDHA11^ENSG00000249158.7" ; ccdsid "CCDS75326.1" ; exon_id "ENSE00003719125.1" ; exon_number 1 ; gene_id "PCDHA11--PCDHAC2^PCDHA11^ENSG00000249158.7" ; gene_name PCDHA11 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163369.3" ; havana_transcript "OTTHUMT00000477577.1" ; hgnc_id "HGNC:8665" ; level 2 ; orig_coord_info "chr5,140869104,140871533,+" ; protein_id "ENSP00000482503.1" ; tag basic CCDS ; transcript_id "PCDHA11--PCDHAC2^ENST00000616325.1" ; transcript_name "PCDHA11-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHA4--PCDHA13 HAVANA gene 14666 23106 . + . FI_gene_label "PCDHA13^ENSG00000239389.8" ; ID "PCDHA4--PCDHA13^PCDHA13^ENSG00000239389.8" ; ccdsid "CCDS4240.1" ; exon_id "ENSE00001038419.2" ; exon_number 1 ; gene_id "PCDHA4--PCDHA13^PCDHA13^ENSG00000239389.8" ; gene_name PCDHA13 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129614.4" ; havana_transcript "OTTHUMT00000335000.2" ; hgnc_id "HGNC:8667" ; level 2 ; orig_coord_info "chr5,140882269,140884662,+" ; protein_id "ENSP00000289272.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHA4--PCDHA13^ENST00000289272.3" ; transcript_name "PCDHA13-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHA4--PCDHA13 HAVANA mRNA 14666 23106 . + . FI_gene_label "PCDHA13^ENSG00000239389.8" ; ID "PCDHA4--PCDHA13^ENST00000289272.3" ; Parent "PCDHA4--PCDHA13^PCDHA13^ENSG00000239389.8" ; ccdsid "CCDS4240.1" ; exon_id "ENSE00001038419.2" ; exon_number 1 ; gene_id "PCDHA4--PCDHA13^PCDHA13^ENSG00000239389.8" ; gene_name PCDHA13 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129614.4" ; havana_transcript "OTTHUMT00000335000.2" ; hgnc_id "HGNC:8667" ; level 2 ; orig_coord_info "chr5,140882269,140884662,+" ; protein_id "ENSP00000289272.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHA4--PCDHA13^ENST00000289272.3" ; transcript_name "PCDHA13-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHA4--PCDHA13 ENSEMBL gene 1001 3590 . + . FI_gene_label "PCDHA4^ENSG00000204967.12" ; ID "PCDHA4--PCDHA13^PCDHA4^ENSG00000204967.12" ; exon_id "ENSE00003735925.1" ; exon_number 1 ; gene_id "PCDHA4--PCDHA13^PCDHA4^ENSG00000204967.12" ; gene_name PCDHA4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163360.5" ; hgnc_id "HGNC:8670" ; level 3 ; orig_coord_info "chr5,140806929,140806945,+" ; protein_id "ENSP00000367365.4" ; tag basic ; transcript_id "PCDHA4--PCDHA13^ENST00000378125.4" ; transcript_name "PCDHA4-201" ; transcript_support_level 5 ; transcript_type protein_coding
PCDHA4--PCDHA13 ENSEMBL mRNA 1001 3590 . + . FI_gene_label "PCDHA4^ENSG00000204967.12" ; ID "PCDHA4--PCDHA13^ENST00000378125.4" ; Parent "PCDHA4--PCDHA13^PCDHA4^ENSG00000204967.12" ; exon_id "ENSE00003735925.1" ; exon_number 1 ; gene_id "PCDHA4--PCDHA13^PCDHA4^ENSG00000204967.12" ; gene_name PCDHA4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163360.5" ; hgnc_id "HGNC:8670" ; level 3 ; orig_coord_info "chr5,140806929,140806945,+" ; protein_id "ENSP00000367365.4" ; tag basic ; transcript_id "PCDHA4--PCDHA13^ENST00000378125.4" ; transcript_name "PCDHA4-201" ; transcript_support_level 5 ; transcript_type protein_coding
L1 and L2 created:
PCDHA4--PCDHAC1 HAVANA gene 14666 24681 . + . FI_gene_label "PCDHAC1^ENSG00000248383.5" ; ID "PCDHA4--PCDHAC1^PCDHAC1^ENSG00000248383.5" ; ccdsid "CCDS4241.1" ; exon_id "ENSE00001085780.5" ; exon_number 1 ; gene_id "PCDHA4--PCDHAC1^PCDHAC1^ENSG00000248383.5" ; gene_name PCDHAC1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129603.3" ; havana_transcript "OTTHUMT00000251798.1" ; hgnc_id "HGNC:8676" ; level 2 ; orig_coord_info "chr5,140926893,140929325,+" ; protein_id "ENSP00000253807.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHA4--PCDHAC1^ENST00000253807.3" ; transcript_name "PCDHAC1-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHA4--PCDHAC1 HAVANA mRNA 14666 24681 . + . FI_gene_label "PCDHAC1^ENSG00000248383.5" ; ID "PCDHA4--PCDHAC1^ENST00000253807.3" ; Parent "PCDHA4--PCDHAC1^PCDHAC1^ENSG00000248383.5" ; ccdsid "CCDS4241.1" ; exon_id "ENSE00001085780.5" ; exon_number 1 ; gene_id "PCDHA4--PCDHAC1^PCDHAC1^ENSG00000248383.5" ; gene_name PCDHAC1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129603.3" ; havana_transcript "OTTHUMT00000251798.1" ; hgnc_id "HGNC:8676" ; level 2 ; orig_coord_info "chr5,140926893,140929325,+" ; protein_id "ENSP00000253807.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHA4--PCDHAC1^ENST00000253807.3" ; transcript_name "PCDHAC1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHA4--PCDHAC1 ENSEMBL gene 1001 3590 . + . FI_gene_label "PCDHA4^ENSG00000204967.12" ; ID "PCDHA4--PCDHAC1^PCDHA4^ENSG00000204967.12" ; exon_id "ENSE00003735925.1" ; exon_number 1 ; gene_id "PCDHA4--PCDHAC1^PCDHA4^ENSG00000204967.12" ; gene_name PCDHA4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163360.5" ; hgnc_id "HGNC:8670" ; level 3 ; orig_coord_info "chr5,140806929,140806945,+" ; protein_id "ENSP00000367365.4" ; tag basic ; transcript_id "PCDHA4--PCDHAC1^ENST00000378125.4" ; transcript_name "PCDHA4-201" ; transcript_support_level 5 ; transcript_type protein_coding
PCDHA4--PCDHAC1 ENSEMBL mRNA 1001 3590 . + . FI_gene_label "PCDHA4^ENSG00000204967.12" ; ID "PCDHA4--PCDHAC1^ENST00000378125.4" ; Parent "PCDHA4--PCDHAC1^PCDHA4^ENSG00000204967.12" ; exon_id "ENSE00003735925.1" ; exon_number 1 ; gene_id "PCDHA4--PCDHAC1^PCDHA4^ENSG00000204967.12" ; gene_name PCDHA4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163360.5" ; hgnc_id "HGNC:8670" ; level 3 ; orig_coord_info "chr5,140806929,140806945,+" ; protein_id "ENSP00000367365.4" ; tag basic ; transcript_id "PCDHA4--PCDHAC1^ENST00000378125.4" ; transcript_name "PCDHA4-201" ; transcript_support_level 5 ; transcript_type protein_coding
L1 and L2 created:
PCDHA4--PCDHAC2 HAVANA gene 14672 25407 . + . FI_gene_label "PCDHAC2^ENSG00000243232.6" ; ID "PCDHA4--PCDHAC2^PCDHAC2^ENSG00000243232.6" ; ccdsid "CCDS4242.1" ; exon_id "ENSE00001038414.4" ; exon_number 1 ; gene_id "PCDHA4--PCDHAC2^PCDHAC2^ENSG00000243232.6" ; gene_name PCDHAC2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129607.7" ; havana_transcript "OTTHUMT00000251802.4" ; hgnc_id "HGNC:8677" ; level 2 ; orig_coord_info "chr5,140966767,140969331,+" ; protein_id "ENSP00000289269.5" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHA4--PCDHAC2^ENST00000289269.7" ; transcript_name "PCDHAC2-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHA4--PCDHAC2 HAVANA mRNA 14672 25407 . + . FI_gene_label "PCDHAC2^ENSG00000243232.6" ; ID "PCDHA4--PCDHAC2^ENST00000289269.7" ; Parent "PCDHA4--PCDHAC2^PCDHAC2^ENSG00000243232.6" ; ccdsid "CCDS4242.1" ; exon_id "ENSE00001038414.4" ; exon_number 1 ; gene_id "PCDHA4--PCDHAC2^PCDHAC2^ENSG00000243232.6" ; gene_name PCDHAC2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129607.7" ; havana_transcript "OTTHUMT00000251802.4" ; hgnc_id "HGNC:8677" ; level 2 ; orig_coord_info "chr5,140966767,140969331,+" ; protein_id "ENSP00000289269.5" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHA4--PCDHAC2^ENST00000289269.7" ; transcript_name "PCDHAC2-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHA4--PCDHAC2 ENSEMBL gene 1001 3590 . + . FI_gene_label "PCDHA4^ENSG00000204967.12" ; ID "PCDHA4--PCDHAC2^PCDHA4^ENSG00000204967.12" ; exon_id "ENSE00003735925.1" ; exon_number 1 ; gene_id "PCDHA4--PCDHAC2^PCDHA4^ENSG00000204967.12" ; gene_name PCDHA4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163360.5" ; hgnc_id "HGNC:8670" ; level 3 ; orig_coord_info "chr5,140806929,140806945,+" ; protein_id "ENSP00000367365.4" ; tag basic ; transcript_id "PCDHA4--PCDHAC2^ENST00000378125.4" ; transcript_name "PCDHA4-201" ; transcript_support_level 5 ; transcript_type protein_coding
PCDHA4--PCDHAC2 ENSEMBL mRNA 1001 3590 . + . FI_gene_label "PCDHA4^ENSG00000204967.12" ; ID "PCDHA4--PCDHAC2^ENST00000378125.4" ; Parent "PCDHA4--PCDHAC2^PCDHA4^ENSG00000204967.12" ; exon_id "ENSE00003735925.1" ; exon_number 1 ; gene_id "PCDHA4--PCDHAC2^PCDHA4^ENSG00000204967.12" ; gene_name PCDHA4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163360.5" ; hgnc_id "HGNC:8670" ; level 3 ; orig_coord_info "chr5,140806929,140806945,+" ; protein_id "ENSP00000367365.4" ; tag basic ; transcript_id "PCDHA4--PCDHAC2^ENST00000378125.4" ; transcript_name "PCDHA4-201" ; transcript_support_level 5 ; transcript_type protein_coding
L1 and L2 created:
PCDHA6--PCDHA13 HAVANA gene 7268 15708 . + . FI_gene_label "PCDHA13^ENSG00000239389.8" ; ID "PCDHA6--PCDHA13^PCDHA13^ENSG00000239389.8" ; ccdsid "CCDS4240.1" ; exon_id "ENSE00001038419.2" ; exon_number 1 ; gene_id "PCDHA6--PCDHA13^PCDHA13^ENSG00000239389.8" ; gene_name PCDHA13 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129614.4" ; havana_transcript "OTTHUMT00000335000.2" ; hgnc_id "HGNC:8667" ; level 2 ; orig_coord_info "chr5,140882269,140884662,+" ; protein_id "ENSP00000289272.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHA6--PCDHA13^ENST00000289272.3" ; transcript_name "PCDHA13-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHA6--PCDHA13 HAVANA mRNA 7268 15708 . + . FI_gene_label "PCDHA13^ENSG00000239389.8" ; ID "PCDHA6--PCDHA13^ENST00000289272.3" ; Parent "PCDHA6--PCDHA13^PCDHA13^ENSG00000239389.8" ; ccdsid "CCDS4240.1" ; exon_id "ENSE00001038419.2" ; exon_number 1 ; gene_id "PCDHA6--PCDHA13^PCDHA13^ENSG00000239389.8" ; gene_name PCDHA13 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129614.4" ; havana_transcript "OTTHUMT00000335000.2" ; hgnc_id "HGNC:8667" ; level 2 ; orig_coord_info "chr5,140882269,140884662,+" ; protein_id "ENSP00000289272.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHA6--PCDHA13^ENST00000289272.3" ; transcript_name "PCDHA13-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHA6--PCDHA13 HAVANA gene 1001 4267 . + . FI_gene_label "PCDHA6^ENSG00000081842.18" ; ID "PCDHA6--PCDHA13^PCDHA6^ENSG00000081842.18" ; exon_id "ENSE00001476364.4" ; exon_number 1 ; gene_id "PCDHA6--PCDHA13^PCDHA6^ENSG00000081842.18" ; gene_name PCDHA6 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163353.5" ; havana_transcript "OTTHUMT00000477550.1" ; hgnc_id "HGNC:8672" ; level 2 ; orig_coord_info "chr5,140828092,140830500,+" ; protein_id "ENSP00000367366.4" ; tag upstream_ATG RNA_Seq_supported_partial basic ; transcript_id "PCDHA6--PCDHA13^ENST00000378126.4" ; transcript_name "PCDHA6-201" ; transcript_support_level NA ; transcript_type protein_coding
PCDHA6--PCDHA13 HAVANA mRNA 1001 4267 . + . FI_gene_label "PCDHA6^ENSG00000081842.18" ; ID "PCDHA6--PCDHA13^ENST00000378126.4" ; Parent "PCDHA6--PCDHA13^PCDHA6^ENSG00000081842.18" ; exon_id "ENSE00001476364.4" ; exon_number 1 ; gene_id "PCDHA6--PCDHA13^PCDHA6^ENSG00000081842.18" ; gene_name PCDHA6 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163353.5" ; havana_transcript "OTTHUMT00000477550.1" ; hgnc_id "HGNC:8672" ; level 2 ; orig_coord_info "chr5,140828092,140830500,+" ; protein_id "ENSP00000367366.4" ; tag upstream_ATG RNA_Seq_supported_partial basic ; transcript_id "PCDHA6--PCDHA13^ENST00000378126.4" ; transcript_name "PCDHA6-201" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHA6--PCDHAC1 HAVANA gene 7268 17283 . + . FI_gene_label "PCDHAC1^ENSG00000248383.5" ; ID "PCDHA6--PCDHAC1^PCDHAC1^ENSG00000248383.5" ; ccdsid "CCDS4241.1" ; exon_id "ENSE00001085780.5" ; exon_number 1 ; gene_id "PCDHA6--PCDHAC1^PCDHAC1^ENSG00000248383.5" ; gene_name PCDHAC1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129603.3" ; havana_transcript "OTTHUMT00000251798.1" ; hgnc_id "HGNC:8676" ; level 2 ; orig_coord_info "chr5,140926893,140929325,+" ; protein_id "ENSP00000253807.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHA6--PCDHAC1^ENST00000253807.3" ; transcript_name "PCDHAC1-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHA6--PCDHAC1 HAVANA mRNA 7268 17283 . + . FI_gene_label "PCDHAC1^ENSG00000248383.5" ; ID "PCDHA6--PCDHAC1^ENST00000253807.3" ; Parent "PCDHA6--PCDHAC1^PCDHAC1^ENSG00000248383.5" ; ccdsid "CCDS4241.1" ; exon_id "ENSE00001085780.5" ; exon_number 1 ; gene_id "PCDHA6--PCDHAC1^PCDHAC1^ENSG00000248383.5" ; gene_name PCDHAC1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129603.3" ; havana_transcript "OTTHUMT00000251798.1" ; hgnc_id "HGNC:8676" ; level 2 ; orig_coord_info "chr5,140926893,140929325,+" ; protein_id "ENSP00000253807.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHA6--PCDHAC1^ENST00000253807.3" ; transcript_name "PCDHAC1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHA6--PCDHAC1 HAVANA gene 1001 4267 . + . FI_gene_label "PCDHA6^ENSG00000081842.18" ; ID "PCDHA6--PCDHAC1^PCDHA6^ENSG00000081842.18" ; exon_id "ENSE00001476364.4" ; exon_number 1 ; gene_id "PCDHA6--PCDHAC1^PCDHA6^ENSG00000081842.18" ; gene_name PCDHA6 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163353.5" ; havana_transcript "OTTHUMT00000477550.1" ; hgnc_id "HGNC:8672" ; level 2 ; orig_coord_info "chr5,140828092,140830500,+" ; protein_id "ENSP00000367366.4" ; tag upstream_ATG RNA_Seq_supported_partial basic ; transcript_id "PCDHA6--PCDHAC1^ENST00000378126.4" ; transcript_name "PCDHA6-201" ; transcript_support_level NA ; transcript_type protein_coding
PCDHA6--PCDHAC1 HAVANA mRNA 1001 4267 . + . FI_gene_label "PCDHA6^ENSG00000081842.18" ; ID "PCDHA6--PCDHAC1^ENST00000378126.4" ; Parent "PCDHA6--PCDHAC1^PCDHA6^ENSG00000081842.18" ; exon_id "ENSE00001476364.4" ; exon_number 1 ; gene_id "PCDHA6--PCDHAC1^PCDHA6^ENSG00000081842.18" ; gene_name PCDHA6 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163353.5" ; havana_transcript "OTTHUMT00000477550.1" ; hgnc_id "HGNC:8672" ; level 2 ; orig_coord_info "chr5,140828092,140830500,+" ; protein_id "ENSP00000367366.4" ; tag upstream_ATG RNA_Seq_supported_partial basic ; transcript_id "PCDHA6--PCDHAC1^ENST00000378126.4" ; transcript_name "PCDHA6-201" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHA6--PCDHAC2 HAVANA gene 7274 18009 . + . FI_gene_label "PCDHAC2^ENSG00000243232.6" ; ID "PCDHA6--PCDHAC2^PCDHAC2^ENSG00000243232.6" ; ccdsid "CCDS4242.1" ; exon_id "ENSE00001038414.4" ; exon_number 1 ; gene_id "PCDHA6--PCDHAC2^PCDHAC2^ENSG00000243232.6" ; gene_name PCDHAC2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129607.7" ; havana_transcript "OTTHUMT00000251802.4" ; hgnc_id "HGNC:8677" ; level 2 ; orig_coord_info "chr5,140966767,140969331,+" ; protein_id "ENSP00000289269.5" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHA6--PCDHAC2^ENST00000289269.7" ; transcript_name "PCDHAC2-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHA6--PCDHAC2 HAVANA mRNA 7274 18009 . + . FI_gene_label "PCDHAC2^ENSG00000243232.6" ; ID "PCDHA6--PCDHAC2^ENST00000289269.7" ; Parent "PCDHA6--PCDHAC2^PCDHAC2^ENSG00000243232.6" ; ccdsid "CCDS4242.1" ; exon_id "ENSE00001038414.4" ; exon_number 1 ; gene_id "PCDHA6--PCDHAC2^PCDHAC2^ENSG00000243232.6" ; gene_name PCDHAC2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129607.7" ; havana_transcript "OTTHUMT00000251802.4" ; hgnc_id "HGNC:8677" ; level 2 ; orig_coord_info "chr5,140966767,140969331,+" ; protein_id "ENSP00000289269.5" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHA6--PCDHAC2^ENST00000289269.7" ; transcript_name "PCDHAC2-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHA6--PCDHAC2 HAVANA gene 1001 4267 . + . FI_gene_label "PCDHA6^ENSG00000081842.18" ; ID "PCDHA6--PCDHAC2^PCDHA6^ENSG00000081842.18" ; exon_id "ENSE00001476364.4" ; exon_number 1 ; gene_id "PCDHA6--PCDHAC2^PCDHA6^ENSG00000081842.18" ; gene_name PCDHA6 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163353.5" ; havana_transcript "OTTHUMT00000477550.1" ; hgnc_id "HGNC:8672" ; level 2 ; orig_coord_info "chr5,140828092,140830500,+" ; protein_id "ENSP00000367366.4" ; tag upstream_ATG RNA_Seq_supported_partial basic ; transcript_id "PCDHA6--PCDHAC2^ENST00000378126.4" ; transcript_name "PCDHA6-201" ; transcript_support_level NA ; transcript_type protein_coding
PCDHA6--PCDHAC2 HAVANA mRNA 1001 4267 . + . FI_gene_label "PCDHA6^ENSG00000081842.18" ; ID "PCDHA6--PCDHAC2^ENST00000378126.4" ; Parent "PCDHA6--PCDHAC2^PCDHA6^ENSG00000081842.18" ; exon_id "ENSE00001476364.4" ; exon_number 1 ; gene_id "PCDHA6--PCDHAC2^PCDHA6^ENSG00000081842.18" ; gene_name PCDHA6 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163353.5" ; havana_transcript "OTTHUMT00000477550.1" ; hgnc_id "HGNC:8672" ; level 2 ; orig_coord_info "chr5,140828092,140830500,+" ; protein_id "ENSP00000367366.4" ; tag upstream_ATG RNA_Seq_supported_partial basic ; transcript_id "PCDHA6--PCDHAC2^ENST00000378126.4" ; transcript_name "PCDHA6-201" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGA2--PCDHGA10 HAVANA gene 8733 18186 . + . FI_gene_label "PCDHGA10^ENSG00000253846.2" ; ID "PCDHGA2--PCDHGA10^PCDHGA10^ENSG00000253846.2" ; ccdsid "CCDS47292.1" ; exon_id "ENSE00001792208.1" ; exon_number 1 ; gene_id "PCDHGA2--PCDHGA10^PCDHGA10^ENSG00000253846.2" ; gene_name PCDHGA10 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163688.2" ; havana_transcript "OTTHUMT00000374747.1" ; hgnc_id "HGNC:8697" ; level 2 ; orig_coord_info "chr5,141413176,141415611,+" ; protein_id "ENSP00000381611.2" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGA2--PCDHGA10^ENST00000398610.2" ; transcript_name "PCDHGA10-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA2--PCDHGA10 HAVANA mRNA 8733 18186 . + . FI_gene_label "PCDHGA10^ENSG00000253846.2" ; ID "PCDHGA2--PCDHGA10^ENST00000398610.2" ; Parent "PCDHGA2--PCDHGA10^PCDHGA10^ENSG00000253846.2" ; ccdsid "CCDS47292.1" ; exon_id "ENSE00001792208.1" ; exon_number 1 ; gene_id "PCDHGA2--PCDHGA10^PCDHGA10^ENSG00000253846.2" ; gene_name PCDHGA10 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163688.2" ; havana_transcript "OTTHUMT00000374747.1" ; hgnc_id "HGNC:8697" ; level 2 ; orig_coord_info "chr5,141413176,141415611,+" ; protein_id "ENSP00000381611.2" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGA2--PCDHGA10^ENST00000398610.2" ; transcript_name "PCDHGA10-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA2--PCDHGA10 HAVANA gene 1001 5543 . + . FI_gene_label "PCDHGA2^ENSG00000081853.15" ; ID "PCDHGA2--PCDHGA10^PCDHGA2^ENSG00000081853.15" ; exon_id "ENSE00002198097.2" ; exon_number 1 ; gene_id "PCDHGA2--PCDHGA10^PCDHGA2^ENSG00000081853.15" ; gene_name PCDHGA2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163679.4" ; havana_transcript "OTTHUMT00000377024.2" ; hgnc_id "HGNC:8700" ; level 2 ; orig_coord_info "chr5,141338972,141341440,+" ; protein_id "ENSP00000483020.1" ; tag basic ; transcript_id "PCDHGA2--PCDHGA10^ENST00000528330.2" ; transcript_name "PCDHGA2-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA2--PCDHGA10 HAVANA mRNA 1001 5543 . + . FI_gene_label "PCDHGA2^ENSG00000081853.15" ; ID "PCDHGA2--PCDHGA10^ENST00000528330.2" ; Parent "PCDHGA2--PCDHGA10^PCDHGA2^ENSG00000081853.15" ; exon_id "ENSE00002198097.2" ; exon_number 1 ; gene_id "PCDHGA2--PCDHGA10^PCDHGA2^ENSG00000081853.15" ; gene_name PCDHGA2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163679.4" ; havana_transcript "OTTHUMT00000377024.2" ; hgnc_id "HGNC:8700" ; level 2 ; orig_coord_info "chr5,141338972,141341440,+" ; protein_id "ENSP00000483020.1" ; tag basic ; transcript_id "PCDHGA2--PCDHGA10^ENST00000528330.2" ; transcript_name "PCDHGA2-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGA2--PCDHGA11 HAVANA gene 8548 17353 . + . FI_gene_label "PCDHGA11^ENSG00000253873.6" ; ID "PCDHGA2--PCDHGA11^PCDHGA11^ENSG00000253873.6" ; ccdsid "CCDS47294.1" ; exon_id "ENSE00001533810.3" ; exon_number 1 ; gene_id "PCDHGA2--PCDHGA11^PCDHGA11^ENSG00000253873.6" ; gene_name PCDHGA11 ; gene_type protein_coding ; havana_gene "OTTHUMG00000164055.3" ; havana_transcript "OTTHUMT00000376974.3" ; hgnc_id "HGNC:8698" ; level 2 ; orig_coord_info "chr5,141421228,141423660,+" ; protein_id "ENSP00000381589.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA2--PCDHGA11^ENST00000398587.7" ; transcript_name "PCDHGA11-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA2--PCDHGA11 HAVANA mRNA 8548 17353 . + . FI_gene_label "PCDHGA11^ENSG00000253873.6" ; ID "PCDHGA2--PCDHGA11^ENST00000398587.7" ; Parent "PCDHGA2--PCDHGA11^PCDHGA11^ENSG00000253873.6" ; ccdsid "CCDS47294.1" ; exon_id "ENSE00001533810.3" ; exon_number 1 ; gene_id "PCDHGA2--PCDHGA11^PCDHGA11^ENSG00000253873.6" ; gene_name PCDHGA11 ; gene_type protein_coding ; havana_gene "OTTHUMG00000164055.3" ; havana_transcript "OTTHUMT00000376974.3" ; hgnc_id "HGNC:8698" ; level 2 ; orig_coord_info "chr5,141421228,141423660,+" ; protein_id "ENSP00000381589.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA2--PCDHGA11^ENST00000398587.7" ; transcript_name "PCDHGA11-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA2--PCDHGA11 HAVANA gene 1001 5543 . + . FI_gene_label "PCDHGA2^ENSG00000081853.15" ; ID "PCDHGA2--PCDHGA11^PCDHGA2^ENSG00000081853.15" ; exon_id "ENSE00002198097.2" ; exon_number 1 ; gene_id "PCDHGA2--PCDHGA11^PCDHGA2^ENSG00000081853.15" ; gene_name PCDHGA2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163679.4" ; havana_transcript "OTTHUMT00000377024.2" ; hgnc_id "HGNC:8700" ; level 2 ; orig_coord_info "chr5,141338972,141341440,+" ; protein_id "ENSP00000483020.1" ; tag basic ; transcript_id "PCDHGA2--PCDHGA11^ENST00000528330.2" ; transcript_name "PCDHGA2-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA2--PCDHGA11 HAVANA mRNA 1001 5543 . + . FI_gene_label "PCDHGA2^ENSG00000081853.15" ; ID "PCDHGA2--PCDHGA11^ENST00000528330.2" ; Parent "PCDHGA2--PCDHGA11^PCDHGA2^ENSG00000081853.15" ; exon_id "ENSE00002198097.2" ; exon_number 1 ; gene_id "PCDHGA2--PCDHGA11^PCDHGA2^ENSG00000081853.15" ; gene_name PCDHGA2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163679.4" ; havana_transcript "OTTHUMT00000377024.2" ; hgnc_id "HGNC:8700" ; level 2 ; orig_coord_info "chr5,141338972,141341440,+" ; protein_id "ENSP00000483020.1" ; tag basic ; transcript_id "PCDHGA2--PCDHGA11^ENST00000528330.2" ; transcript_name "PCDHGA2-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGA2--PCDHGA12 HAVANA gene 8544 16436 . + . FI_gene_label "PCDHGA12^ENSG00000253159.3" ; ID "PCDHGA2--PCDHGA12^PCDHGA12^ENSG00000253159.3" ; ccdsid "CCDS4260.1" ; exon_id "ENSE00000814269.5" ; exon_number 1 ; gene_id "PCDHGA2--PCDHGA12^PCDHGA12^ENSG00000253159.3" ; gene_name PCDHGA12 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129611.6" ; havana_transcript "OTTHUMT00000251806.3" ; hgnc_id "HGNC:8699" ; level 2 ; orig_coord_info "chr5,141430760,141433183,+" ; protein_id "ENSP00000252085.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA2--PCDHGA12^ENST00000252085.4" ; transcript_name "PCDHGA12-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA2--PCDHGA12 HAVANA mRNA 8544 16436 . + . FI_gene_label "PCDHGA12^ENSG00000253159.3" ; ID "PCDHGA2--PCDHGA12^ENST00000252085.4" ; Parent "PCDHGA2--PCDHGA12^PCDHGA12^ENSG00000253159.3" ; ccdsid "CCDS4260.1" ; exon_id "ENSE00000814269.5" ; exon_number 1 ; gene_id "PCDHGA2--PCDHGA12^PCDHGA12^ENSG00000253159.3" ; gene_name PCDHGA12 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129611.6" ; havana_transcript "OTTHUMT00000251806.3" ; hgnc_id "HGNC:8699" ; level 2 ; orig_coord_info "chr5,141430760,141433183,+" ; protein_id "ENSP00000252085.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA2--PCDHGA12^ENST00000252085.4" ; transcript_name "PCDHGA12-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA2--PCDHGA12 HAVANA gene 1001 5543 . + . FI_gene_label "PCDHGA2^ENSG00000081853.15" ; ID "PCDHGA2--PCDHGA12^PCDHGA2^ENSG00000081853.15" ; exon_id "ENSE00002198097.2" ; exon_number 1 ; gene_id "PCDHGA2--PCDHGA12^PCDHGA2^ENSG00000081853.15" ; gene_name PCDHGA2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163679.4" ; havana_transcript "OTTHUMT00000377024.2" ; hgnc_id "HGNC:8700" ; level 2 ; orig_coord_info "chr5,141338972,141341440,+" ; protein_id "ENSP00000483020.1" ; tag basic ; transcript_id "PCDHGA2--PCDHGA12^ENST00000528330.2" ; transcript_name "PCDHGA2-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA2--PCDHGA12 HAVANA mRNA 1001 5543 . + . FI_gene_label "PCDHGA2^ENSG00000081853.15" ; ID "PCDHGA2--PCDHGA12^ENST00000528330.2" ; Parent "PCDHGA2--PCDHGA12^PCDHGA2^ENSG00000081853.15" ; exon_id "ENSE00002198097.2" ; exon_number 1 ; gene_id "PCDHGA2--PCDHGA12^PCDHGA2^ENSG00000081853.15" ; gene_name PCDHGA2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163679.4" ; havana_transcript "OTTHUMT00000377024.2" ; hgnc_id "HGNC:8700" ; level 2 ; orig_coord_info "chr5,141338972,141341440,+" ; protein_id "ENSP00000483020.1" ; tag basic ; transcript_id "PCDHGA2--PCDHGA12^ENST00000528330.2" ; transcript_name "PCDHGA2-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGA2--PCDHGA8 HAVANA gene 11020 20200 . + . FI_gene_label "PCDHGA8^ENSG00000253767.3" ; ID "PCDHGA2--PCDHGA8^PCDHGA8^ENSG00000253767.3" ; ccdsid "CCDS47291.1" ; exon_id "ENSE00001533882.3" ; exon_number 1 ; gene_id "PCDHGA2--PCDHGA8^PCDHGA8^ENSG00000253767.3" ; gene_name PCDHGA8 ; gene_type protein_coding ; havana_gene "OTTHUMG00000164053.2" ; havana_transcript "OTTHUMT00000376972.1" ; hgnc_id "HGNC:8706" ; level 2 ; orig_coord_info "chr5,141392814,141395237,+" ; protein_id "ENSP00000381605.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA2--PCDHGA8^ENST00000398604.3" ; transcript_name "PCDHGA8-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA2--PCDHGA8 HAVANA mRNA 11020 20200 . + . FI_gene_label "PCDHGA8^ENSG00000253767.3" ; ID "PCDHGA2--PCDHGA8^ENST00000398604.3" ; Parent "PCDHGA2--PCDHGA8^PCDHGA8^ENSG00000253767.3" ; ccdsid "CCDS47291.1" ; exon_id "ENSE00001533882.3" ; exon_number 1 ; gene_id "PCDHGA2--PCDHGA8^PCDHGA8^ENSG00000253767.3" ; gene_name PCDHGA8 ; gene_type protein_coding ; havana_gene "OTTHUMG00000164053.2" ; havana_transcript "OTTHUMT00000376972.1" ; hgnc_id "HGNC:8706" ; level 2 ; orig_coord_info "chr5,141392814,141395237,+" ; protein_id "ENSP00000381605.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA2--PCDHGA8^ENST00000398604.3" ; transcript_name "PCDHGA8-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA2--PCDHGA8 HAVANA gene 1001 5543 . + . FI_gene_label "PCDHGA2^ENSG00000081853.15" ; ID "PCDHGA2--PCDHGA8^PCDHGA2^ENSG00000081853.15" ; exon_id "ENSE00002198097.2" ; exon_number 1 ; gene_id "PCDHGA2--PCDHGA8^PCDHGA2^ENSG00000081853.15" ; gene_name PCDHGA2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163679.4" ; havana_transcript "OTTHUMT00000377024.2" ; hgnc_id "HGNC:8700" ; level 2 ; orig_coord_info "chr5,141338972,141341440,+" ; protein_id "ENSP00000483020.1" ; tag basic ; transcript_id "PCDHGA2--PCDHGA8^ENST00000528330.2" ; transcript_name "PCDHGA2-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA2--PCDHGA8 HAVANA mRNA 1001 5543 . + . FI_gene_label "PCDHGA2^ENSG00000081853.15" ; ID "PCDHGA2--PCDHGA8^ENST00000528330.2" ; Parent "PCDHGA2--PCDHGA8^PCDHGA2^ENSG00000081853.15" ; exon_id "ENSE00002198097.2" ; exon_number 1 ; gene_id "PCDHGA2--PCDHGA8^PCDHGA2^ENSG00000081853.15" ; gene_name PCDHGA2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163679.4" ; havana_transcript "OTTHUMT00000377024.2" ; hgnc_id "HGNC:8700" ; level 2 ; orig_coord_info "chr5,141338972,141341440,+" ; protein_id "ENSP00000483020.1" ; tag basic ; transcript_id "PCDHGA2--PCDHGA8^ENST00000528330.2" ; transcript_name "PCDHGA2-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGA2--PCDHGA9 HAVANA gene 1001 5543 . + . FI_gene_label "PCDHGA2^ENSG00000081853.15" ; ID "PCDHGA2--PCDHGA9^PCDHGA2^ENSG00000081853.15" ; exon_id "ENSE00002198097.2" ; exon_number 1 ; gene_id "PCDHGA2--PCDHGA9^PCDHGA2^ENSG00000081853.15" ; gene_name PCDHGA2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163679.4" ; havana_transcript "OTTHUMT00000377024.2" ; hgnc_id "HGNC:8700" ; level 2 ; orig_coord_info "chr5,141338972,141341440,+" ; protein_id "ENSP00000483020.1" ; tag basic ; transcript_id "PCDHGA2--PCDHGA9^ENST00000528330.2" ; transcript_name "PCDHGA2-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA2--PCDHGA9 HAVANA mRNA 1001 5543 . + . FI_gene_label "PCDHGA2^ENSG00000081853.15" ; ID "PCDHGA2--PCDHGA9^ENST00000528330.2" ; Parent "PCDHGA2--PCDHGA9^PCDHGA2^ENSG00000081853.15" ; exon_id "ENSE00002198097.2" ; exon_number 1 ; gene_id "PCDHGA2--PCDHGA9^PCDHGA2^ENSG00000081853.15" ; gene_name PCDHGA2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163679.4" ; havana_transcript "OTTHUMT00000377024.2" ; hgnc_id "HGNC:8700" ; level 2 ; orig_coord_info "chr5,141338972,141341440,+" ; protein_id "ENSP00000483020.1" ; tag basic ; transcript_id "PCDHGA2--PCDHGA9^ENST00000528330.2" ; transcript_name "PCDHGA2-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGA2--PCDHGA9 HAVANA gene 8565 16292 . + . FI_gene_label "PCDHGA9^ENSG00000261934.2" ; ID "PCDHGA2--PCDHGA9^PCDHGA9^ENSG00000261934.2" ; ccdsid "CCDS58981.1" ; exon_id "ENSE00002639131.1" ; exon_number 1 ; gene_id "PCDHGA2--PCDHGA9^PCDHGA9^ENSG00000261934.2" ; gene_name PCDHGA9 ; gene_type protein_coding ; havana_gene "OTTHUMG00000177473.2" ; havana_transcript "OTTHUMT00000437105.1" ; hgnc_id "HGNC:8707" ; level 2 ; orig_coord_info "chr5,141402953,141405376,+" ; protein_id "ENSP00000460274.1" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGA2--PCDHGA9^ENST00000573521.1" ; transcript_name "PCDHGA9-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA2--PCDHGA9 HAVANA mRNA 8565 16292 . + . FI_gene_label "PCDHGA9^ENSG00000261934.2" ; ID "PCDHGA2--PCDHGA9^ENST00000573521.1" ; Parent "PCDHGA2--PCDHGA9^PCDHGA9^ENSG00000261934.2" ; ccdsid "CCDS58981.1" ; exon_id "ENSE00002639131.1" ; exon_number 1 ; gene_id "PCDHGA2--PCDHGA9^PCDHGA9^ENSG00000261934.2" ; gene_name PCDHGA9 ; gene_type protein_coding ; havana_gene "OTTHUMG00000177473.2" ; havana_transcript "OTTHUMT00000437105.1" ; hgnc_id "HGNC:8707" ; level 2 ; orig_coord_info "chr5,141402953,141405376,+" ; protein_id "ENSP00000460274.1" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGA2--PCDHGA9^ENST00000573521.1" ; transcript_name "PCDHGA9-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA2--PCDHGB6 HAVANA gene 8726 18325 . + . FI_gene_label "PCDHGB6^ENSG00000253305.2" ; ID "PCDHGA2--PCDHGB6^PCDHGB6^ENSG00000253305.2" ; ccdsid "CCDS54929.1" ; exon_id "ENSE00002122685.1" ; exon_number 1 ; gene_id "PCDHGA2--PCDHGB6^PCDHGB6^ENSG00000253305.2" ; gene_name PCDHGB6 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163687.2" ; havana_transcript "OTTHUMT00000374746.1" ; hgnc_id "HGNC:8713" ; level 2 ; orig_coord_info "chr5,141408203,141410620,+" ; protein_id "ENSP00000428603.1" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGA2--PCDHGB6^ENST00000520790.1" ; transcript_name "PCDHGB6-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA2--PCDHGB6 HAVANA mRNA 8726 18325 . + . FI_gene_label "PCDHGB6^ENSG00000253305.2" ; ID "PCDHGA2--PCDHGB6^ENST00000520790.1" ; Parent "PCDHGA2--PCDHGB6^PCDHGB6^ENSG00000253305.2" ; ccdsid "CCDS54929.1" ; exon_id "ENSE00002122685.1" ; exon_number 1 ; gene_id "PCDHGA2--PCDHGB6^PCDHGB6^ENSG00000253305.2" ; gene_name PCDHGB6 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163687.2" ; havana_transcript "OTTHUMT00000374746.1" ; hgnc_id "HGNC:8713" ; level 2 ; orig_coord_info "chr5,141408203,141410620,+" ; protein_id "ENSP00000428603.1" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGA2--PCDHGB6^ENST00000520790.1" ; transcript_name "PCDHGB6-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA2--PCDHGB6 HAVANA gene 1001 5543 . + . FI_gene_label "PCDHGA2^ENSG00000081853.15" ; ID "PCDHGA2--PCDHGB6^PCDHGA2^ENSG00000081853.15" ; exon_id "ENSE00002198097.2" ; exon_number 1 ; gene_id "PCDHGA2--PCDHGB6^PCDHGA2^ENSG00000081853.15" ; gene_name PCDHGA2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163679.4" ; havana_transcript "OTTHUMT00000377024.2" ; hgnc_id "HGNC:8700" ; level 2 ; orig_coord_info "chr5,141338972,141341440,+" ; protein_id "ENSP00000483020.1" ; tag basic ; transcript_id "PCDHGA2--PCDHGB6^ENST00000528330.2" ; transcript_name "PCDHGA2-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA2--PCDHGB6 HAVANA mRNA 1001 5543 . + . FI_gene_label "PCDHGA2^ENSG00000081853.15" ; ID "PCDHGA2--PCDHGB6^ENST00000528330.2" ; Parent "PCDHGA2--PCDHGB6^PCDHGA2^ENSG00000081853.15" ; exon_id "ENSE00002198097.2" ; exon_number 1 ; gene_id "PCDHGA2--PCDHGB6^PCDHGA2^ENSG00000081853.15" ; gene_name PCDHGA2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163679.4" ; havana_transcript "OTTHUMT00000377024.2" ; hgnc_id "HGNC:8700" ; level 2 ; orig_coord_info "chr5,141338972,141341440,+" ; protein_id "ENSP00000483020.1" ; tag basic ; transcript_id "PCDHGA2--PCDHGB6^ENST00000528330.2" ; transcript_name "PCDHGA2-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGA2--PCDHGB7 HAVANA gene 8576 16505 . + . FI_gene_label "PCDHGB7^ENSG00000254122.3" ; ID "PCDHGA2--PCDHGB7^PCDHGB7^ENSG00000254122.3" ; ccdsid "CCDS47293.1" ; exon_id "ENSE00001533845.4" ; exon_number 1 ; gene_id "PCDHGA2--PCDHGB7^PCDHGB7^ENSG00000254122.3" ; gene_name PCDHGB7 ; gene_type protein_coding ; havana_gene "OTTHUMG00000164054.2" ; havana_transcript "OTTHUMT00000376973.2" ; hgnc_id "HGNC:8714" ; level 2 ; orig_coord_info "chr5,141417860,141420274,+" ; protein_id "ENSP00000381594.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA2--PCDHGB7^ENST00000398594.4" ; transcript_name "PCDHGB7-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA2--PCDHGB7 HAVANA mRNA 8576 16505 . + . FI_gene_label "PCDHGB7^ENSG00000254122.3" ; ID "PCDHGA2--PCDHGB7^ENST00000398594.4" ; Parent "PCDHGA2--PCDHGB7^PCDHGB7^ENSG00000254122.3" ; ccdsid "CCDS47293.1" ; exon_id "ENSE00001533845.4" ; exon_number 1 ; gene_id "PCDHGA2--PCDHGB7^PCDHGB7^ENSG00000254122.3" ; gene_name PCDHGB7 ; gene_type protein_coding ; havana_gene "OTTHUMG00000164054.2" ; havana_transcript "OTTHUMT00000376973.2" ; hgnc_id "HGNC:8714" ; level 2 ; orig_coord_info "chr5,141417860,141420274,+" ; protein_id "ENSP00000381594.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA2--PCDHGB7^ENST00000398594.4" ; transcript_name "PCDHGB7-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA2--PCDHGB7 HAVANA gene 1001 5543 . + . FI_gene_label "PCDHGA2^ENSG00000081853.15" ; ID "PCDHGA2--PCDHGB7^PCDHGA2^ENSG00000081853.15" ; exon_id "ENSE00002198097.2" ; exon_number 1 ; gene_id "PCDHGA2--PCDHGB7^PCDHGA2^ENSG00000081853.15" ; gene_name PCDHGA2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163679.4" ; havana_transcript "OTTHUMT00000377024.2" ; hgnc_id "HGNC:8700" ; level 2 ; orig_coord_info "chr5,141338972,141341440,+" ; protein_id "ENSP00000483020.1" ; tag basic ; transcript_id "PCDHGA2--PCDHGB7^ENST00000528330.2" ; transcript_name "PCDHGA2-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA2--PCDHGB7 HAVANA mRNA 1001 5543 . + . FI_gene_label "PCDHGA2^ENSG00000081853.15" ; ID "PCDHGA2--PCDHGB7^ENST00000528330.2" ; Parent "PCDHGA2--PCDHGB7^PCDHGA2^ENSG00000081853.15" ; exon_id "ENSE00002198097.2" ; exon_number 1 ; gene_id "PCDHGA2--PCDHGB7^PCDHGA2^ENSG00000081853.15" ; gene_name PCDHGA2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163679.4" ; havana_transcript "OTTHUMT00000377024.2" ; hgnc_id "HGNC:8700" ; level 2 ; orig_coord_info "chr5,141338972,141341440,+" ; protein_id "ENSP00000483020.1" ; tag basic ; transcript_id "PCDHGA2--PCDHGB7^ENST00000528330.2" ; transcript_name "PCDHGA2-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGA2--PCDHGC3 HAVANA gene 8563 18749 . + . FI_gene_label "PCDHGC3^ENSG00000240184.7" ; ID "PCDHGA2--PCDHGC3^PCDHGC3^ENSG00000240184.7" ; ccdsid "CCDS4261.1" ; exon_id "ENSE00001199459.7" ; exon_number 1 ; gene_id "PCDHGA2--PCDHGC3^PCDHGC3^ENSG00000240184.7" ; gene_name PCDHGC3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129613.8" ; havana_transcript "OTTHUMT00000251808.5" ; hgnc_id "HGNC:8716" ; level 2 ; orig_coord_info "chr5,141476117,141478546,+" ; protein_id "ENSP00000312070.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA2--PCDHGC3^ENST00000308177.5" ; transcript_name "PCDHGC3-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA2--PCDHGC3 HAVANA mRNA 8563 18749 . + . FI_gene_label "PCDHGC3^ENSG00000240184.7" ; ID "PCDHGA2--PCDHGC3^ENST00000308177.5" ; Parent "PCDHGA2--PCDHGC3^PCDHGC3^ENSG00000240184.7" ; ccdsid "CCDS4261.1" ; exon_id "ENSE00001199459.7" ; exon_number 1 ; gene_id "PCDHGA2--PCDHGC3^PCDHGC3^ENSG00000240184.7" ; gene_name PCDHGC3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129613.8" ; havana_transcript "OTTHUMT00000251808.5" ; hgnc_id "HGNC:8716" ; level 2 ; orig_coord_info "chr5,141476117,141478546,+" ; protein_id "ENSP00000312070.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA2--PCDHGC3^ENST00000308177.5" ; transcript_name "PCDHGC3-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA2--PCDHGC3 HAVANA gene 1001 5543 . + . FI_gene_label "PCDHGA2^ENSG00000081853.15" ; ID "PCDHGA2--PCDHGC3^PCDHGA2^ENSG00000081853.15" ; exon_id "ENSE00002198097.2" ; exon_number 1 ; gene_id "PCDHGA2--PCDHGC3^PCDHGA2^ENSG00000081853.15" ; gene_name PCDHGA2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163679.4" ; havana_transcript "OTTHUMT00000377024.2" ; hgnc_id "HGNC:8700" ; level 2 ; orig_coord_info "chr5,141338972,141341440,+" ; protein_id "ENSP00000483020.1" ; tag basic ; transcript_id "PCDHGA2--PCDHGC3^ENST00000528330.2" ; transcript_name "PCDHGA2-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA2--PCDHGC3 HAVANA mRNA 1001 5543 . + . FI_gene_label "PCDHGA2^ENSG00000081853.15" ; ID "PCDHGA2--PCDHGC3^ENST00000528330.2" ; Parent "PCDHGA2--PCDHGC3^PCDHGA2^ENSG00000081853.15" ; exon_id "ENSE00002198097.2" ; exon_number 1 ; gene_id "PCDHGA2--PCDHGC3^PCDHGA2^ENSG00000081853.15" ; gene_name PCDHGA2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163679.4" ; havana_transcript "OTTHUMT00000377024.2" ; hgnc_id "HGNC:8700" ; level 2 ; orig_coord_info "chr5,141338972,141341440,+" ; protein_id "ENSP00000483020.1" ; tag basic ; transcript_id "PCDHGA2--PCDHGC3^ENST00000528330.2" ; transcript_name "PCDHGA2-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGA2--PCDHGC4 HAVANA gene 8721 16517 . + . FI_gene_label "PCDHGC4^ENSG00000242419.5" ; ID "PCDHGA2--PCDHGC4^PCDHGC4^ENSG00000242419.5" ; ccdsid "CCDS4262.1" ; exon_id "ENSE00001162305.2" ; exon_number 1 ; gene_id "PCDHGA2--PCDHGC4^PCDHGC4^ENSG00000242419.5" ; gene_name PCDHGC4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129625.4" ; havana_transcript "OTTHUMT00000251820.2" ; hgnc_id "HGNC:8717" ; level 2 ; orig_coord_info "chr5,141485174,141487615,+" ; protein_id "ENSP00000306918.1" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGA2--PCDHGC4^ENST00000306593.1" ; transcript_name "PCDHGC4-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA2--PCDHGC4 HAVANA mRNA 8721 16517 . + . FI_gene_label "PCDHGC4^ENSG00000242419.5" ; ID "PCDHGA2--PCDHGC4^ENST00000306593.1" ; Parent "PCDHGA2--PCDHGC4^PCDHGC4^ENSG00000242419.5" ; ccdsid "CCDS4262.1" ; exon_id "ENSE00001162305.2" ; exon_number 1 ; gene_id "PCDHGA2--PCDHGC4^PCDHGC4^ENSG00000242419.5" ; gene_name PCDHGC4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129625.4" ; havana_transcript "OTTHUMT00000251820.2" ; hgnc_id "HGNC:8717" ; level 2 ; orig_coord_info "chr5,141485174,141487615,+" ; protein_id "ENSP00000306918.1" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGA2--PCDHGC4^ENST00000306593.1" ; transcript_name "PCDHGC4-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA2--PCDHGC4 HAVANA gene 1001 5543 . + . FI_gene_label "PCDHGA2^ENSG00000081853.15" ; ID "PCDHGA2--PCDHGC4^PCDHGA2^ENSG00000081853.15" ; exon_id "ENSE00002198097.2" ; exon_number 1 ; gene_id "PCDHGA2--PCDHGC4^PCDHGA2^ENSG00000081853.15" ; gene_name PCDHGA2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163679.4" ; havana_transcript "OTTHUMT00000377024.2" ; hgnc_id "HGNC:8700" ; level 2 ; orig_coord_info "chr5,141338972,141341440,+" ; protein_id "ENSP00000483020.1" ; tag basic ; transcript_id "PCDHGA2--PCDHGC4^ENST00000528330.2" ; transcript_name "PCDHGA2-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA2--PCDHGC4 HAVANA mRNA 1001 5543 . + . FI_gene_label "PCDHGA2^ENSG00000081853.15" ; ID "PCDHGA2--PCDHGC4^ENST00000528330.2" ; Parent "PCDHGA2--PCDHGC4^PCDHGA2^ENSG00000081853.15" ; exon_id "ENSE00002198097.2" ; exon_number 1 ; gene_id "PCDHGA2--PCDHGC4^PCDHGA2^ENSG00000081853.15" ; gene_name PCDHGA2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163679.4" ; havana_transcript "OTTHUMT00000377024.2" ; hgnc_id "HGNC:8700" ; level 2 ; orig_coord_info "chr5,141338972,141341440,+" ; protein_id "ENSP00000483020.1" ; tag basic ; transcript_id "PCDHGA2--PCDHGC4^ENST00000528330.2" ; transcript_name "PCDHGA2-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGA2--PCDHGC5 HAVANA gene 8544 16569 . + . FI_gene_label "PCDHGC5^ENSG00000240764.4" ; ID "PCDHGA2--PCDHGC5^PCDHGC5^ENSG00000240764.4" ; ccdsid "CCDS4263.1" ; exon_id "ENSE00000766474.3" ; exon_number 1 ; gene_id "PCDHGA2--PCDHGC5^PCDHGC5^ENSG00000240764.4" ; gene_name PCDHGC5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129624.2" ; havana_transcript "OTTHUMT00000251819.2" ; hgnc_id "HGNC:8718" ; level 2 ; orig_coord_info "chr5,141489241,141491700,+" ; protein_id "ENSP00000252087.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA2--PCDHGC5^ENST00000252087.3" ; transcript_name "PCDHGC5-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA2--PCDHGC5 HAVANA mRNA 8544 16569 . + . FI_gene_label "PCDHGC5^ENSG00000240764.4" ; ID "PCDHGA2--PCDHGC5^ENST00000252087.3" ; Parent "PCDHGA2--PCDHGC5^PCDHGC5^ENSG00000240764.4" ; ccdsid "CCDS4263.1" ; exon_id "ENSE00000766474.3" ; exon_number 1 ; gene_id "PCDHGA2--PCDHGC5^PCDHGC5^ENSG00000240764.4" ; gene_name PCDHGC5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129624.2" ; havana_transcript "OTTHUMT00000251819.2" ; hgnc_id "HGNC:8718" ; level 2 ; orig_coord_info "chr5,141489241,141491700,+" ; protein_id "ENSP00000252087.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA2--PCDHGC5^ENST00000252087.3" ; transcript_name "PCDHGC5-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA2--PCDHGC5 HAVANA gene 1001 5543 . + . FI_gene_label "PCDHGA2^ENSG00000081853.15" ; ID "PCDHGA2--PCDHGC5^PCDHGA2^ENSG00000081853.15" ; exon_id "ENSE00002198097.2" ; exon_number 1 ; gene_id "PCDHGA2--PCDHGC5^PCDHGA2^ENSG00000081853.15" ; gene_name PCDHGA2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163679.4" ; havana_transcript "OTTHUMT00000377024.2" ; hgnc_id "HGNC:8700" ; level 2 ; orig_coord_info "chr5,141338972,141341440,+" ; protein_id "ENSP00000483020.1" ; tag basic ; transcript_id "PCDHGA2--PCDHGC5^ENST00000528330.2" ; transcript_name "PCDHGA2-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA2--PCDHGC5 HAVANA mRNA 1001 5543 . + . FI_gene_label "PCDHGA2^ENSG00000081853.15" ; ID "PCDHGA2--PCDHGC5^ENST00000528330.2" ; Parent "PCDHGA2--PCDHGC5^PCDHGA2^ENSG00000081853.15" ; exon_id "ENSE00002198097.2" ; exon_number 1 ; gene_id "PCDHGA2--PCDHGC5^PCDHGA2^ENSG00000081853.15" ; gene_name PCDHGA2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163679.4" ; havana_transcript "OTTHUMT00000377024.2" ; hgnc_id "HGNC:8700" ; level 2 ; orig_coord_info "chr5,141338972,141341440,+" ; protein_id "ENSP00000483020.1" ; tag basic ; transcript_id "PCDHGA2--PCDHGC5^ENST00000528330.2" ; transcript_name "PCDHGA2-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGA3--PCDHGA10 HAVANA gene 6885 16338 . + . FI_gene_label "PCDHGA10^ENSG00000253846.2" ; ID "PCDHGA3--PCDHGA10^PCDHGA10^ENSG00000253846.2" ; ccdsid "CCDS47292.1" ; exon_id "ENSE00001792208.1" ; exon_number 1 ; gene_id "PCDHGA3--PCDHGA10^PCDHGA10^ENSG00000253846.2" ; gene_name PCDHGA10 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163688.2" ; havana_transcript "OTTHUMT00000374747.1" ; hgnc_id "HGNC:8697" ; level 2 ; orig_coord_info "chr5,141413176,141415611,+" ; protein_id "ENSP00000381611.2" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGA3--PCDHGA10^ENST00000398610.2" ; transcript_name "PCDHGA10-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA3--PCDHGA10 HAVANA mRNA 6885 16338 . + . FI_gene_label "PCDHGA10^ENSG00000253846.2" ; ID "PCDHGA3--PCDHGA10^ENST00000398610.2" ; Parent "PCDHGA3--PCDHGA10^PCDHGA10^ENSG00000253846.2" ; ccdsid "CCDS47292.1" ; exon_id "ENSE00001792208.1" ; exon_number 1 ; gene_id "PCDHGA3--PCDHGA10^PCDHGA10^ENSG00000253846.2" ; gene_name PCDHGA10 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163688.2" ; havana_transcript "OTTHUMT00000374747.1" ; hgnc_id "HGNC:8697" ; level 2 ; orig_coord_info "chr5,141413176,141415611,+" ; protein_id "ENSP00000381611.2" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGA3--PCDHGA10^ENST00000398610.2" ; transcript_name "PCDHGA10-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA3--PCDHGA10 HAVANA gene 1001 3695 . + . FI_gene_label "PCDHGA3^ENSG00000254245.3" ; ID "PCDHGA3--PCDHGA10^PCDHGA3^ENSG00000254245.3" ; ccdsid "CCDS75329.1" ; exon_id "ENSE00003734988.1" ; exon_number 1 ; gene_id "PCDHGA3--PCDHGA10^PCDHGA3^ENSG00000254245.3" ; gene_name PCDHGA3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163680.4" ; havana_transcript "OTTHUMT00000377016.3" ; hgnc_id "HGNC:8701" ; level 2 ; orig_coord_info "chr5,141344034,141346520,+" ; protein_id "ENSP00000479265.1" ; tag basic CCDS ; transcript_id "PCDHGA3--PCDHGA10^ENST00000619750.1" ; transcript_name "PCDHGA3-203" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA3--PCDHGA10 HAVANA mRNA 1001 3695 . + . FI_gene_label "PCDHGA3^ENSG00000254245.3" ; ID "PCDHGA3--PCDHGA10^ENST00000619750.1" ; Parent "PCDHGA3--PCDHGA10^PCDHGA3^ENSG00000254245.3" ; ccdsid "CCDS75329.1" ; exon_id "ENSE00003734988.1" ; exon_number 1 ; gene_id "PCDHGA3--PCDHGA10^PCDHGA3^ENSG00000254245.3" ; gene_name PCDHGA3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163680.4" ; havana_transcript "OTTHUMT00000377016.3" ; hgnc_id "HGNC:8701" ; level 2 ; orig_coord_info "chr5,141344034,141346520,+" ; protein_id "ENSP00000479265.1" ; tag basic CCDS ; transcript_id "PCDHGA3--PCDHGA10^ENST00000619750.1" ; transcript_name "PCDHGA3-203" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGA3--PCDHGA11 HAVANA gene 6700 15505 . + . FI_gene_label "PCDHGA11^ENSG00000253873.6" ; ID "PCDHGA3--PCDHGA11^PCDHGA11^ENSG00000253873.6" ; ccdsid "CCDS47294.1" ; exon_id "ENSE00001533810.3" ; exon_number 1 ; gene_id "PCDHGA3--PCDHGA11^PCDHGA11^ENSG00000253873.6" ; gene_name PCDHGA11 ; gene_type protein_coding ; havana_gene "OTTHUMG00000164055.3" ; havana_transcript "OTTHUMT00000376974.3" ; hgnc_id "HGNC:8698" ; level 2 ; orig_coord_info "chr5,141421228,141423660,+" ; protein_id "ENSP00000381589.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA3--PCDHGA11^ENST00000398587.7" ; transcript_name "PCDHGA11-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA3--PCDHGA11 HAVANA mRNA 6700 15505 . + . FI_gene_label "PCDHGA11^ENSG00000253873.6" ; ID "PCDHGA3--PCDHGA11^ENST00000398587.7" ; Parent "PCDHGA3--PCDHGA11^PCDHGA11^ENSG00000253873.6" ; ccdsid "CCDS47294.1" ; exon_id "ENSE00001533810.3" ; exon_number 1 ; gene_id "PCDHGA3--PCDHGA11^PCDHGA11^ENSG00000253873.6" ; gene_name PCDHGA11 ; gene_type protein_coding ; havana_gene "OTTHUMG00000164055.3" ; havana_transcript "OTTHUMT00000376974.3" ; hgnc_id "HGNC:8698" ; level 2 ; orig_coord_info "chr5,141421228,141423660,+" ; protein_id "ENSP00000381589.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA3--PCDHGA11^ENST00000398587.7" ; transcript_name "PCDHGA11-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA3--PCDHGA11 HAVANA gene 1001 3695 . + . FI_gene_label "PCDHGA3^ENSG00000254245.3" ; ID "PCDHGA3--PCDHGA11^PCDHGA3^ENSG00000254245.3" ; ccdsid "CCDS75329.1" ; exon_id "ENSE00003734988.1" ; exon_number 1 ; gene_id "PCDHGA3--PCDHGA11^PCDHGA3^ENSG00000254245.3" ; gene_name PCDHGA3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163680.4" ; havana_transcript "OTTHUMT00000377016.3" ; hgnc_id "HGNC:8701" ; level 2 ; orig_coord_info "chr5,141344034,141346520,+" ; protein_id "ENSP00000479265.1" ; tag basic CCDS ; transcript_id "PCDHGA3--PCDHGA11^ENST00000619750.1" ; transcript_name "PCDHGA3-203" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA3--PCDHGA11 HAVANA mRNA 1001 3695 . + . FI_gene_label "PCDHGA3^ENSG00000254245.3" ; ID "PCDHGA3--PCDHGA11^ENST00000619750.1" ; Parent "PCDHGA3--PCDHGA11^PCDHGA3^ENSG00000254245.3" ; ccdsid "CCDS75329.1" ; exon_id "ENSE00003734988.1" ; exon_number 1 ; gene_id "PCDHGA3--PCDHGA11^PCDHGA3^ENSG00000254245.3" ; gene_name PCDHGA3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163680.4" ; havana_transcript "OTTHUMT00000377016.3" ; hgnc_id "HGNC:8701" ; level 2 ; orig_coord_info "chr5,141344034,141346520,+" ; protein_id "ENSP00000479265.1" ; tag basic CCDS ; transcript_id "PCDHGA3--PCDHGA11^ENST00000619750.1" ; transcript_name "PCDHGA3-203" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGA3--PCDHGA12 HAVANA gene 6696 14588 . + . FI_gene_label "PCDHGA12^ENSG00000253159.3" ; ID "PCDHGA3--PCDHGA12^PCDHGA12^ENSG00000253159.3" ; ccdsid "CCDS4260.1" ; exon_id "ENSE00000814269.5" ; exon_number 1 ; gene_id "PCDHGA3--PCDHGA12^PCDHGA12^ENSG00000253159.3" ; gene_name PCDHGA12 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129611.6" ; havana_transcript "OTTHUMT00000251806.3" ; hgnc_id "HGNC:8699" ; level 2 ; orig_coord_info "chr5,141430760,141433183,+" ; protein_id "ENSP00000252085.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA3--PCDHGA12^ENST00000252085.4" ; transcript_name "PCDHGA12-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA3--PCDHGA12 HAVANA mRNA 6696 14588 . + . FI_gene_label "PCDHGA12^ENSG00000253159.3" ; ID "PCDHGA3--PCDHGA12^ENST00000252085.4" ; Parent "PCDHGA3--PCDHGA12^PCDHGA12^ENSG00000253159.3" ; ccdsid "CCDS4260.1" ; exon_id "ENSE00000814269.5" ; exon_number 1 ; gene_id "PCDHGA3--PCDHGA12^PCDHGA12^ENSG00000253159.3" ; gene_name PCDHGA12 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129611.6" ; havana_transcript "OTTHUMT00000251806.3" ; hgnc_id "HGNC:8699" ; level 2 ; orig_coord_info "chr5,141430760,141433183,+" ; protein_id "ENSP00000252085.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA3--PCDHGA12^ENST00000252085.4" ; transcript_name "PCDHGA12-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA3--PCDHGA12 HAVANA gene 1001 3695 . + . FI_gene_label "PCDHGA3^ENSG00000254245.3" ; ID "PCDHGA3--PCDHGA12^PCDHGA3^ENSG00000254245.3" ; ccdsid "CCDS75329.1" ; exon_id "ENSE00003734988.1" ; exon_number 1 ; gene_id "PCDHGA3--PCDHGA12^PCDHGA3^ENSG00000254245.3" ; gene_name PCDHGA3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163680.4" ; havana_transcript "OTTHUMT00000377016.3" ; hgnc_id "HGNC:8701" ; level 2 ; orig_coord_info "chr5,141344034,141346520,+" ; protein_id "ENSP00000479265.1" ; tag basic CCDS ; transcript_id "PCDHGA3--PCDHGA12^ENST00000619750.1" ; transcript_name "PCDHGA3-203" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA3--PCDHGA12 HAVANA mRNA 1001 3695 . + . FI_gene_label "PCDHGA3^ENSG00000254245.3" ; ID "PCDHGA3--PCDHGA12^ENST00000619750.1" ; Parent "PCDHGA3--PCDHGA12^PCDHGA3^ENSG00000254245.3" ; ccdsid "CCDS75329.1" ; exon_id "ENSE00003734988.1" ; exon_number 1 ; gene_id "PCDHGA3--PCDHGA12^PCDHGA3^ENSG00000254245.3" ; gene_name PCDHGA3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163680.4" ; havana_transcript "OTTHUMT00000377016.3" ; hgnc_id "HGNC:8701" ; level 2 ; orig_coord_info "chr5,141344034,141346520,+" ; protein_id "ENSP00000479265.1" ; tag basic CCDS ; transcript_id "PCDHGA3--PCDHGA12^ENST00000619750.1" ; transcript_name "PCDHGA3-203" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGA3--PCDHGA8 HAVANA gene 9172 18352 . + . FI_gene_label "PCDHGA8^ENSG00000253767.3" ; ID "PCDHGA3--PCDHGA8^PCDHGA8^ENSG00000253767.3" ; ccdsid "CCDS47291.1" ; exon_id "ENSE00001533882.3" ; exon_number 1 ; gene_id "PCDHGA3--PCDHGA8^PCDHGA8^ENSG00000253767.3" ; gene_name PCDHGA8 ; gene_type protein_coding ; havana_gene "OTTHUMG00000164053.2" ; havana_transcript "OTTHUMT00000376972.1" ; hgnc_id "HGNC:8706" ; level 2 ; orig_coord_info "chr5,141392814,141395237,+" ; protein_id "ENSP00000381605.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA3--PCDHGA8^ENST00000398604.3" ; transcript_name "PCDHGA8-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA3--PCDHGA8 HAVANA mRNA 9172 18352 . + . FI_gene_label "PCDHGA8^ENSG00000253767.3" ; ID "PCDHGA3--PCDHGA8^ENST00000398604.3" ; Parent "PCDHGA3--PCDHGA8^PCDHGA8^ENSG00000253767.3" ; ccdsid "CCDS47291.1" ; exon_id "ENSE00001533882.3" ; exon_number 1 ; gene_id "PCDHGA3--PCDHGA8^PCDHGA8^ENSG00000253767.3" ; gene_name PCDHGA8 ; gene_type protein_coding ; havana_gene "OTTHUMG00000164053.2" ; havana_transcript "OTTHUMT00000376972.1" ; hgnc_id "HGNC:8706" ; level 2 ; orig_coord_info "chr5,141392814,141395237,+" ; protein_id "ENSP00000381605.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA3--PCDHGA8^ENST00000398604.3" ; transcript_name "PCDHGA8-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA3--PCDHGA8 HAVANA gene 1001 3695 . + . FI_gene_label "PCDHGA3^ENSG00000254245.3" ; ID "PCDHGA3--PCDHGA8^PCDHGA3^ENSG00000254245.3" ; ccdsid "CCDS75329.1" ; exon_id "ENSE00003734988.1" ; exon_number 1 ; gene_id "PCDHGA3--PCDHGA8^PCDHGA3^ENSG00000254245.3" ; gene_name PCDHGA3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163680.4" ; havana_transcript "OTTHUMT00000377016.3" ; hgnc_id "HGNC:8701" ; level 2 ; orig_coord_info "chr5,141344034,141346520,+" ; protein_id "ENSP00000479265.1" ; tag basic CCDS ; transcript_id "PCDHGA3--PCDHGA8^ENST00000619750.1" ; transcript_name "PCDHGA3-203" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA3--PCDHGA8 HAVANA mRNA 1001 3695 . + . FI_gene_label "PCDHGA3^ENSG00000254245.3" ; ID "PCDHGA3--PCDHGA8^ENST00000619750.1" ; Parent "PCDHGA3--PCDHGA8^PCDHGA3^ENSG00000254245.3" ; ccdsid "CCDS75329.1" ; exon_id "ENSE00003734988.1" ; exon_number 1 ; gene_id "PCDHGA3--PCDHGA8^PCDHGA3^ENSG00000254245.3" ; gene_name PCDHGA3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163680.4" ; havana_transcript "OTTHUMT00000377016.3" ; hgnc_id "HGNC:8701" ; level 2 ; orig_coord_info "chr5,141344034,141346520,+" ; protein_id "ENSP00000479265.1" ; tag basic CCDS ; transcript_id "PCDHGA3--PCDHGA8^ENST00000619750.1" ; transcript_name "PCDHGA3-203" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGA3--PCDHGA9 HAVANA gene 6717 14444 . + . FI_gene_label "PCDHGA9^ENSG00000261934.2" ; ID "PCDHGA3--PCDHGA9^PCDHGA9^ENSG00000261934.2" ; ccdsid "CCDS58981.1" ; exon_id "ENSE00002639131.1" ; exon_number 1 ; gene_id "PCDHGA3--PCDHGA9^PCDHGA9^ENSG00000261934.2" ; gene_name PCDHGA9 ; gene_type protein_coding ; havana_gene "OTTHUMG00000177473.2" ; havana_transcript "OTTHUMT00000437105.1" ; hgnc_id "HGNC:8707" ; level 2 ; orig_coord_info "chr5,141402953,141405376,+" ; protein_id "ENSP00000460274.1" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGA3--PCDHGA9^ENST00000573521.1" ; transcript_name "PCDHGA9-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA3--PCDHGA9 HAVANA mRNA 6717 14444 . + . FI_gene_label "PCDHGA9^ENSG00000261934.2" ; ID "PCDHGA3--PCDHGA9^ENST00000573521.1" ; Parent "PCDHGA3--PCDHGA9^PCDHGA9^ENSG00000261934.2" ; ccdsid "CCDS58981.1" ; exon_id "ENSE00002639131.1" ; exon_number 1 ; gene_id "PCDHGA3--PCDHGA9^PCDHGA9^ENSG00000261934.2" ; gene_name PCDHGA9 ; gene_type protein_coding ; havana_gene "OTTHUMG00000177473.2" ; havana_transcript "OTTHUMT00000437105.1" ; hgnc_id "HGNC:8707" ; level 2 ; orig_coord_info "chr5,141402953,141405376,+" ; protein_id "ENSP00000460274.1" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGA3--PCDHGA9^ENST00000573521.1" ; transcript_name "PCDHGA9-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA3--PCDHGA9 HAVANA gene 1001 3695 . + . FI_gene_label "PCDHGA3^ENSG00000254245.3" ; ID "PCDHGA3--PCDHGA9^PCDHGA3^ENSG00000254245.3" ; ccdsid "CCDS75329.1" ; exon_id "ENSE00003734988.1" ; exon_number 1 ; gene_id "PCDHGA3--PCDHGA9^PCDHGA3^ENSG00000254245.3" ; gene_name PCDHGA3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163680.4" ; havana_transcript "OTTHUMT00000377016.3" ; hgnc_id "HGNC:8701" ; level 2 ; orig_coord_info "chr5,141344034,141346520,+" ; protein_id "ENSP00000479265.1" ; tag basic CCDS ; transcript_id "PCDHGA3--PCDHGA9^ENST00000619750.1" ; transcript_name "PCDHGA3-203" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA3--PCDHGA9 HAVANA mRNA 1001 3695 . + . FI_gene_label "PCDHGA3^ENSG00000254245.3" ; ID "PCDHGA3--PCDHGA9^ENST00000619750.1" ; Parent "PCDHGA3--PCDHGA9^PCDHGA3^ENSG00000254245.3" ; ccdsid "CCDS75329.1" ; exon_id "ENSE00003734988.1" ; exon_number 1 ; gene_id "PCDHGA3--PCDHGA9^PCDHGA3^ENSG00000254245.3" ; gene_name PCDHGA3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163680.4" ; havana_transcript "OTTHUMT00000377016.3" ; hgnc_id "HGNC:8701" ; level 2 ; orig_coord_info "chr5,141344034,141346520,+" ; protein_id "ENSP00000479265.1" ; tag basic CCDS ; transcript_id "PCDHGA3--PCDHGA9^ENST00000619750.1" ; transcript_name "PCDHGA3-203" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGA3--PCDHGB6 HAVANA gene 6878 16477 . + . FI_gene_label "PCDHGB6^ENSG00000253305.2" ; ID "PCDHGA3--PCDHGB6^PCDHGB6^ENSG00000253305.2" ; ccdsid "CCDS54929.1" ; exon_id "ENSE00002122685.1" ; exon_number 1 ; gene_id "PCDHGA3--PCDHGB6^PCDHGB6^ENSG00000253305.2" ; gene_name PCDHGB6 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163687.2" ; havana_transcript "OTTHUMT00000374746.1" ; hgnc_id "HGNC:8713" ; level 2 ; orig_coord_info "chr5,141408203,141410620,+" ; protein_id "ENSP00000428603.1" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGA3--PCDHGB6^ENST00000520790.1" ; transcript_name "PCDHGB6-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA3--PCDHGB6 HAVANA mRNA 6878 16477 . + . FI_gene_label "PCDHGB6^ENSG00000253305.2" ; ID "PCDHGA3--PCDHGB6^ENST00000520790.1" ; Parent "PCDHGA3--PCDHGB6^PCDHGB6^ENSG00000253305.2" ; ccdsid "CCDS54929.1" ; exon_id "ENSE00002122685.1" ; exon_number 1 ; gene_id "PCDHGA3--PCDHGB6^PCDHGB6^ENSG00000253305.2" ; gene_name PCDHGB6 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163687.2" ; havana_transcript "OTTHUMT00000374746.1" ; hgnc_id "HGNC:8713" ; level 2 ; orig_coord_info "chr5,141408203,141410620,+" ; protein_id "ENSP00000428603.1" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGA3--PCDHGB6^ENST00000520790.1" ; transcript_name "PCDHGB6-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA3--PCDHGB6 HAVANA gene 1001 3695 . + . FI_gene_label "PCDHGA3^ENSG00000254245.3" ; ID "PCDHGA3--PCDHGB6^PCDHGA3^ENSG00000254245.3" ; ccdsid "CCDS75329.1" ; exon_id "ENSE00003734988.1" ; exon_number 1 ; gene_id "PCDHGA3--PCDHGB6^PCDHGA3^ENSG00000254245.3" ; gene_name PCDHGA3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163680.4" ; havana_transcript "OTTHUMT00000377016.3" ; hgnc_id "HGNC:8701" ; level 2 ; orig_coord_info "chr5,141344034,141346520,+" ; protein_id "ENSP00000479265.1" ; tag basic CCDS ; transcript_id "PCDHGA3--PCDHGB6^ENST00000619750.1" ; transcript_name "PCDHGA3-203" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA3--PCDHGB6 HAVANA mRNA 1001 3695 . + . FI_gene_label "PCDHGA3^ENSG00000254245.3" ; ID "PCDHGA3--PCDHGB6^ENST00000619750.1" ; Parent "PCDHGA3--PCDHGB6^PCDHGA3^ENSG00000254245.3" ; ccdsid "CCDS75329.1" ; exon_id "ENSE00003734988.1" ; exon_number 1 ; gene_id "PCDHGA3--PCDHGB6^PCDHGA3^ENSG00000254245.3" ; gene_name PCDHGA3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163680.4" ; havana_transcript "OTTHUMT00000377016.3" ; hgnc_id "HGNC:8701" ; level 2 ; orig_coord_info "chr5,141344034,141346520,+" ; protein_id "ENSP00000479265.1" ; tag basic CCDS ; transcript_id "PCDHGA3--PCDHGB6^ENST00000619750.1" ; transcript_name "PCDHGA3-203" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGA3--PCDHGB7 HAVANA gene 6728 14657 . + . FI_gene_label "PCDHGB7^ENSG00000254122.3" ; ID "PCDHGA3--PCDHGB7^PCDHGB7^ENSG00000254122.3" ; ccdsid "CCDS47293.1" ; exon_id "ENSE00001533845.4" ; exon_number 1 ; gene_id "PCDHGA3--PCDHGB7^PCDHGB7^ENSG00000254122.3" ; gene_name PCDHGB7 ; gene_type protein_coding ; havana_gene "OTTHUMG00000164054.2" ; havana_transcript "OTTHUMT00000376973.2" ; hgnc_id "HGNC:8714" ; level 2 ; orig_coord_info "chr5,141417860,141420274,+" ; protein_id "ENSP00000381594.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA3--PCDHGB7^ENST00000398594.4" ; transcript_name "PCDHGB7-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA3--PCDHGB7 HAVANA mRNA 6728 14657 . + . FI_gene_label "PCDHGB7^ENSG00000254122.3" ; ID "PCDHGA3--PCDHGB7^ENST00000398594.4" ; Parent "PCDHGA3--PCDHGB7^PCDHGB7^ENSG00000254122.3" ; ccdsid "CCDS47293.1" ; exon_id "ENSE00001533845.4" ; exon_number 1 ; gene_id "PCDHGA3--PCDHGB7^PCDHGB7^ENSG00000254122.3" ; gene_name PCDHGB7 ; gene_type protein_coding ; havana_gene "OTTHUMG00000164054.2" ; havana_transcript "OTTHUMT00000376973.2" ; hgnc_id "HGNC:8714" ; level 2 ; orig_coord_info "chr5,141417860,141420274,+" ; protein_id "ENSP00000381594.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA3--PCDHGB7^ENST00000398594.4" ; transcript_name "PCDHGB7-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA3--PCDHGB7 HAVANA gene 1001 3695 . + . FI_gene_label "PCDHGA3^ENSG00000254245.3" ; ID "PCDHGA3--PCDHGB7^PCDHGA3^ENSG00000254245.3" ; ccdsid "CCDS75329.1" ; exon_id "ENSE00003734988.1" ; exon_number 1 ; gene_id "PCDHGA3--PCDHGB7^PCDHGA3^ENSG00000254245.3" ; gene_name PCDHGA3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163680.4" ; havana_transcript "OTTHUMT00000377016.3" ; hgnc_id "HGNC:8701" ; level 2 ; orig_coord_info "chr5,141344034,141346520,+" ; protein_id "ENSP00000479265.1" ; tag basic CCDS ; transcript_id "PCDHGA3--PCDHGB7^ENST00000619750.1" ; transcript_name "PCDHGA3-203" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA3--PCDHGB7 HAVANA mRNA 1001 3695 . + . FI_gene_label "PCDHGA3^ENSG00000254245.3" ; ID "PCDHGA3--PCDHGB7^ENST00000619750.1" ; Parent "PCDHGA3--PCDHGB7^PCDHGA3^ENSG00000254245.3" ; ccdsid "CCDS75329.1" ; exon_id "ENSE00003734988.1" ; exon_number 1 ; gene_id "PCDHGA3--PCDHGB7^PCDHGA3^ENSG00000254245.3" ; gene_name PCDHGA3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163680.4" ; havana_transcript "OTTHUMT00000377016.3" ; hgnc_id "HGNC:8701" ; level 2 ; orig_coord_info "chr5,141344034,141346520,+" ; protein_id "ENSP00000479265.1" ; tag basic CCDS ; transcript_id "PCDHGA3--PCDHGB7^ENST00000619750.1" ; transcript_name "PCDHGA3-203" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGA3--PCDHGC3 HAVANA gene 6715 16901 . + . FI_gene_label "PCDHGC3^ENSG00000240184.7" ; ID "PCDHGA3--PCDHGC3^PCDHGC3^ENSG00000240184.7" ; ccdsid "CCDS4261.1" ; exon_id "ENSE00001199459.7" ; exon_number 1 ; gene_id "PCDHGA3--PCDHGC3^PCDHGC3^ENSG00000240184.7" ; gene_name PCDHGC3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129613.8" ; havana_transcript "OTTHUMT00000251808.5" ; hgnc_id "HGNC:8716" ; level 2 ; orig_coord_info "chr5,141476117,141478546,+" ; protein_id "ENSP00000312070.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA3--PCDHGC3^ENST00000308177.5" ; transcript_name "PCDHGC3-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA3--PCDHGC3 HAVANA mRNA 6715 16901 . + . FI_gene_label "PCDHGC3^ENSG00000240184.7" ; ID "PCDHGA3--PCDHGC3^ENST00000308177.5" ; Parent "PCDHGA3--PCDHGC3^PCDHGC3^ENSG00000240184.7" ; ccdsid "CCDS4261.1" ; exon_id "ENSE00001199459.7" ; exon_number 1 ; gene_id "PCDHGA3--PCDHGC3^PCDHGC3^ENSG00000240184.7" ; gene_name PCDHGC3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129613.8" ; havana_transcript "OTTHUMT00000251808.5" ; hgnc_id "HGNC:8716" ; level 2 ; orig_coord_info "chr5,141476117,141478546,+" ; protein_id "ENSP00000312070.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA3--PCDHGC3^ENST00000308177.5" ; transcript_name "PCDHGC3-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA3--PCDHGC3 HAVANA gene 1001 3695 . + . FI_gene_label "PCDHGA3^ENSG00000254245.3" ; ID "PCDHGA3--PCDHGC3^PCDHGA3^ENSG00000254245.3" ; ccdsid "CCDS75329.1" ; exon_id "ENSE00003734988.1" ; exon_number 1 ; gene_id "PCDHGA3--PCDHGC3^PCDHGA3^ENSG00000254245.3" ; gene_name PCDHGA3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163680.4" ; havana_transcript "OTTHUMT00000377016.3" ; hgnc_id "HGNC:8701" ; level 2 ; orig_coord_info "chr5,141344034,141346520,+" ; protein_id "ENSP00000479265.1" ; tag basic CCDS ; transcript_id "PCDHGA3--PCDHGC3^ENST00000619750.1" ; transcript_name "PCDHGA3-203" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA3--PCDHGC3 HAVANA mRNA 1001 3695 . + . FI_gene_label "PCDHGA3^ENSG00000254245.3" ; ID "PCDHGA3--PCDHGC3^ENST00000619750.1" ; Parent "PCDHGA3--PCDHGC3^PCDHGA3^ENSG00000254245.3" ; ccdsid "CCDS75329.1" ; exon_id "ENSE00003734988.1" ; exon_number 1 ; gene_id "PCDHGA3--PCDHGC3^PCDHGA3^ENSG00000254245.3" ; gene_name PCDHGA3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163680.4" ; havana_transcript "OTTHUMT00000377016.3" ; hgnc_id "HGNC:8701" ; level 2 ; orig_coord_info "chr5,141344034,141346520,+" ; protein_id "ENSP00000479265.1" ; tag basic CCDS ; transcript_id "PCDHGA3--PCDHGC3^ENST00000619750.1" ; transcript_name "PCDHGA3-203" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGA3--PCDHGC4 HAVANA gene 6873 14669 . + . FI_gene_label "PCDHGC4^ENSG00000242419.5" ; ID "PCDHGA3--PCDHGC4^PCDHGC4^ENSG00000242419.5" ; ccdsid "CCDS4262.1" ; exon_id "ENSE00001162305.2" ; exon_number 1 ; gene_id "PCDHGA3--PCDHGC4^PCDHGC4^ENSG00000242419.5" ; gene_name PCDHGC4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129625.4" ; havana_transcript "OTTHUMT00000251820.2" ; hgnc_id "HGNC:8717" ; level 2 ; orig_coord_info "chr5,141485174,141487615,+" ; protein_id "ENSP00000306918.1" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGA3--PCDHGC4^ENST00000306593.1" ; transcript_name "PCDHGC4-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA3--PCDHGC4 HAVANA mRNA 6873 14669 . + . FI_gene_label "PCDHGC4^ENSG00000242419.5" ; ID "PCDHGA3--PCDHGC4^ENST00000306593.1" ; Parent "PCDHGA3--PCDHGC4^PCDHGC4^ENSG00000242419.5" ; ccdsid "CCDS4262.1" ; exon_id "ENSE00001162305.2" ; exon_number 1 ; gene_id "PCDHGA3--PCDHGC4^PCDHGC4^ENSG00000242419.5" ; gene_name PCDHGC4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129625.4" ; havana_transcript "OTTHUMT00000251820.2" ; hgnc_id "HGNC:8717" ; level 2 ; orig_coord_info "chr5,141485174,141487615,+" ; protein_id "ENSP00000306918.1" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGA3--PCDHGC4^ENST00000306593.1" ; transcript_name "PCDHGC4-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA3--PCDHGC4 HAVANA gene 1001 3695 . + . FI_gene_label "PCDHGA3^ENSG00000254245.3" ; ID "PCDHGA3--PCDHGC4^PCDHGA3^ENSG00000254245.3" ; ccdsid "CCDS75329.1" ; exon_id "ENSE00003734988.1" ; exon_number 1 ; gene_id "PCDHGA3--PCDHGC4^PCDHGA3^ENSG00000254245.3" ; gene_name PCDHGA3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163680.4" ; havana_transcript "OTTHUMT00000377016.3" ; hgnc_id "HGNC:8701" ; level 2 ; orig_coord_info "chr5,141344034,141346520,+" ; protein_id "ENSP00000479265.1" ; tag basic CCDS ; transcript_id "PCDHGA3--PCDHGC4^ENST00000619750.1" ; transcript_name "PCDHGA3-203" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA3--PCDHGC4 HAVANA mRNA 1001 3695 . + . FI_gene_label "PCDHGA3^ENSG00000254245.3" ; ID "PCDHGA3--PCDHGC4^ENST00000619750.1" ; Parent "PCDHGA3--PCDHGC4^PCDHGA3^ENSG00000254245.3" ; ccdsid "CCDS75329.1" ; exon_id "ENSE00003734988.1" ; exon_number 1 ; gene_id "PCDHGA3--PCDHGC4^PCDHGA3^ENSG00000254245.3" ; gene_name PCDHGA3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163680.4" ; havana_transcript "OTTHUMT00000377016.3" ; hgnc_id "HGNC:8701" ; level 2 ; orig_coord_info "chr5,141344034,141346520,+" ; protein_id "ENSP00000479265.1" ; tag basic CCDS ; transcript_id "PCDHGA3--PCDHGC4^ENST00000619750.1" ; transcript_name "PCDHGA3-203" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGA3--PCDHGC5 HAVANA gene 6696 14721 . + . FI_gene_label "PCDHGC5^ENSG00000240764.4" ; ID "PCDHGA3--PCDHGC5^PCDHGC5^ENSG00000240764.4" ; ccdsid "CCDS4263.1" ; exon_id "ENSE00000766474.3" ; exon_number 1 ; gene_id "PCDHGA3--PCDHGC5^PCDHGC5^ENSG00000240764.4" ; gene_name PCDHGC5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129624.2" ; havana_transcript "OTTHUMT00000251819.2" ; hgnc_id "HGNC:8718" ; level 2 ; orig_coord_info "chr5,141489241,141491700,+" ; protein_id "ENSP00000252087.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA3--PCDHGC5^ENST00000252087.3" ; transcript_name "PCDHGC5-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA3--PCDHGC5 HAVANA mRNA 6696 14721 . + . FI_gene_label "PCDHGC5^ENSG00000240764.4" ; ID "PCDHGA3--PCDHGC5^ENST00000252087.3" ; Parent "PCDHGA3--PCDHGC5^PCDHGC5^ENSG00000240764.4" ; ccdsid "CCDS4263.1" ; exon_id "ENSE00000766474.3" ; exon_number 1 ; gene_id "PCDHGA3--PCDHGC5^PCDHGC5^ENSG00000240764.4" ; gene_name PCDHGC5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129624.2" ; havana_transcript "OTTHUMT00000251819.2" ; hgnc_id "HGNC:8718" ; level 2 ; orig_coord_info "chr5,141489241,141491700,+" ; protein_id "ENSP00000252087.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA3--PCDHGC5^ENST00000252087.3" ; transcript_name "PCDHGC5-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA3--PCDHGC5 HAVANA gene 1001 3695 . + . FI_gene_label "PCDHGA3^ENSG00000254245.3" ; ID "PCDHGA3--PCDHGC5^PCDHGA3^ENSG00000254245.3" ; ccdsid "CCDS75329.1" ; exon_id "ENSE00003734988.1" ; exon_number 1 ; gene_id "PCDHGA3--PCDHGC5^PCDHGA3^ENSG00000254245.3" ; gene_name PCDHGA3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163680.4" ; havana_transcript "OTTHUMT00000377016.3" ; hgnc_id "HGNC:8701" ; level 2 ; orig_coord_info "chr5,141344034,141346520,+" ; protein_id "ENSP00000479265.1" ; tag basic CCDS ; transcript_id "PCDHGA3--PCDHGC5^ENST00000619750.1" ; transcript_name "PCDHGA3-203" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA3--PCDHGC5 HAVANA mRNA 1001 3695 . + . FI_gene_label "PCDHGA3^ENSG00000254245.3" ; ID "PCDHGA3--PCDHGC5^ENST00000619750.1" ; Parent "PCDHGA3--PCDHGC5^PCDHGA3^ENSG00000254245.3" ; ccdsid "CCDS75329.1" ; exon_id "ENSE00003734988.1" ; exon_number 1 ; gene_id "PCDHGA3--PCDHGC5^PCDHGA3^ENSG00000254245.3" ; gene_name PCDHGA3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163680.4" ; havana_transcript "OTTHUMT00000377016.3" ; hgnc_id "HGNC:8701" ; level 2 ; orig_coord_info "chr5,141344034,141346520,+" ; protein_id "ENSP00000479265.1" ; tag basic CCDS ; transcript_id "PCDHGA3--PCDHGC5^ENST00000619750.1" ; transcript_name "PCDHGA3-203" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGA5--PCDHGA10 HAVANA gene 7742 17195 . + . FI_gene_label "PCDHGA10^ENSG00000253846.2" ; ID "PCDHGA5--PCDHGA10^PCDHGA10^ENSG00000253846.2" ; ccdsid "CCDS47292.1" ; exon_id "ENSE00001792208.1" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGA10^PCDHGA10^ENSG00000253846.2" ; gene_name PCDHGA10 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163688.2" ; havana_transcript "OTTHUMT00000374747.1" ; hgnc_id "HGNC:8697" ; level 2 ; orig_coord_info "chr5,141413176,141415611,+" ; protein_id "ENSP00000381611.2" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGA5--PCDHGA10^ENST00000398610.2" ; transcript_name "PCDHGA10-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA5--PCDHGA10 HAVANA mRNA 7742 17195 . + . FI_gene_label "PCDHGA10^ENSG00000253846.2" ; ID "PCDHGA5--PCDHGA10^ENST00000398610.2" ; Parent "PCDHGA5--PCDHGA10^PCDHGA10^ENSG00000253846.2" ; ccdsid "CCDS47292.1" ; exon_id "ENSE00001792208.1" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGA10^PCDHGA10^ENSG00000253846.2" ; gene_name PCDHGA10 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163688.2" ; havana_transcript "OTTHUMT00000374747.1" ; hgnc_id "HGNC:8697" ; level 2 ; orig_coord_info "chr5,141413176,141415611,+" ; protein_id "ENSP00000381611.2" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGA5--PCDHGA10^ENST00000398610.2" ; transcript_name "PCDHGA10-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA5--PCDHGA10 HAVANA gene 1001 4552 . + . FI_gene_label "PCDHGA5^ENSG00000253485.2" ; ID "PCDHGA5--PCDHGA10^PCDHGA5^ENSG00000253485.2" ; ccdsid "CCDS75333.1" ; exon_id "ENSE00003746232.1" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGA10^PCDHGA5^ENSG00000253485.2" ; gene_name PCDHGA5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163683.2" ; havana_transcript "OTTHUMT00000476686.1" ; hgnc_id "HGNC:8703" ; level 2 ; orig_coord_info "chr5,141364331,141366769,+" ; protein_id "ENSP00000480337.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA5--PCDHGA10^ENST00000611914.1" ; transcript_name "PCDHGA5-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA5--PCDHGA10 HAVANA mRNA 1001 4552 . + . FI_gene_label "PCDHGA5^ENSG00000253485.2" ; ID "PCDHGA5--PCDHGA10^ENST00000611914.1" ; Parent "PCDHGA5--PCDHGA10^PCDHGA5^ENSG00000253485.2" ; ccdsid "CCDS75333.1" ; exon_id "ENSE00003746232.1" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGA10^PCDHGA5^ENSG00000253485.2" ; gene_name PCDHGA5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163683.2" ; havana_transcript "OTTHUMT00000476686.1" ; hgnc_id "HGNC:8703" ; level 2 ; orig_coord_info "chr5,141364331,141366769,+" ; protein_id "ENSP00000480337.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA5--PCDHGA10^ENST00000611914.1" ; transcript_name "PCDHGA5-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGA5--PCDHGA11 HAVANA gene 7557 16362 . + . FI_gene_label "PCDHGA11^ENSG00000253873.6" ; ID "PCDHGA5--PCDHGA11^PCDHGA11^ENSG00000253873.6" ; ccdsid "CCDS47294.1" ; exon_id "ENSE00001533810.3" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGA11^PCDHGA11^ENSG00000253873.6" ; gene_name PCDHGA11 ; gene_type protein_coding ; havana_gene "OTTHUMG00000164055.3" ; havana_transcript "OTTHUMT00000376974.3" ; hgnc_id "HGNC:8698" ; level 2 ; orig_coord_info "chr5,141421228,141423660,+" ; protein_id "ENSP00000381589.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA5--PCDHGA11^ENST00000398587.7" ; transcript_name "PCDHGA11-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA5--PCDHGA11 HAVANA mRNA 7557 16362 . + . FI_gene_label "PCDHGA11^ENSG00000253873.6" ; ID "PCDHGA5--PCDHGA11^ENST00000398587.7" ; Parent "PCDHGA5--PCDHGA11^PCDHGA11^ENSG00000253873.6" ; ccdsid "CCDS47294.1" ; exon_id "ENSE00001533810.3" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGA11^PCDHGA11^ENSG00000253873.6" ; gene_name PCDHGA11 ; gene_type protein_coding ; havana_gene "OTTHUMG00000164055.3" ; havana_transcript "OTTHUMT00000376974.3" ; hgnc_id "HGNC:8698" ; level 2 ; orig_coord_info "chr5,141421228,141423660,+" ; protein_id "ENSP00000381589.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA5--PCDHGA11^ENST00000398587.7" ; transcript_name "PCDHGA11-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA5--PCDHGA11 HAVANA gene 1001 4552 . + . FI_gene_label "PCDHGA5^ENSG00000253485.2" ; ID "PCDHGA5--PCDHGA11^PCDHGA5^ENSG00000253485.2" ; ccdsid "CCDS75333.1" ; exon_id "ENSE00003746232.1" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGA11^PCDHGA5^ENSG00000253485.2" ; gene_name PCDHGA5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163683.2" ; havana_transcript "OTTHUMT00000476686.1" ; hgnc_id "HGNC:8703" ; level 2 ; orig_coord_info "chr5,141364331,141366769,+" ; protein_id "ENSP00000480337.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA5--PCDHGA11^ENST00000611914.1" ; transcript_name "PCDHGA5-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA5--PCDHGA11 HAVANA mRNA 1001 4552 . + . FI_gene_label "PCDHGA5^ENSG00000253485.2" ; ID "PCDHGA5--PCDHGA11^ENST00000611914.1" ; Parent "PCDHGA5--PCDHGA11^PCDHGA5^ENSG00000253485.2" ; ccdsid "CCDS75333.1" ; exon_id "ENSE00003746232.1" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGA11^PCDHGA5^ENSG00000253485.2" ; gene_name PCDHGA5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163683.2" ; havana_transcript "OTTHUMT00000476686.1" ; hgnc_id "HGNC:8703" ; level 2 ; orig_coord_info "chr5,141364331,141366769,+" ; protein_id "ENSP00000480337.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA5--PCDHGA11^ENST00000611914.1" ; transcript_name "PCDHGA5-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGA5--PCDHGA12 HAVANA gene 7553 15445 . + . FI_gene_label "PCDHGA12^ENSG00000253159.3" ; ID "PCDHGA5--PCDHGA12^PCDHGA12^ENSG00000253159.3" ; ccdsid "CCDS4260.1" ; exon_id "ENSE00000814269.5" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGA12^PCDHGA12^ENSG00000253159.3" ; gene_name PCDHGA12 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129611.6" ; havana_transcript "OTTHUMT00000251806.3" ; hgnc_id "HGNC:8699" ; level 2 ; orig_coord_info "chr5,141430760,141433183,+" ; protein_id "ENSP00000252085.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA5--PCDHGA12^ENST00000252085.4" ; transcript_name "PCDHGA12-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA5--PCDHGA12 HAVANA mRNA 7553 15445 . + . FI_gene_label "PCDHGA12^ENSG00000253159.3" ; ID "PCDHGA5--PCDHGA12^ENST00000252085.4" ; Parent "PCDHGA5--PCDHGA12^PCDHGA12^ENSG00000253159.3" ; ccdsid "CCDS4260.1" ; exon_id "ENSE00000814269.5" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGA12^PCDHGA12^ENSG00000253159.3" ; gene_name PCDHGA12 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129611.6" ; havana_transcript "OTTHUMT00000251806.3" ; hgnc_id "HGNC:8699" ; level 2 ; orig_coord_info "chr5,141430760,141433183,+" ; protein_id "ENSP00000252085.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA5--PCDHGA12^ENST00000252085.4" ; transcript_name "PCDHGA12-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA5--PCDHGA12 HAVANA gene 1001 4552 . + . FI_gene_label "PCDHGA5^ENSG00000253485.2" ; ID "PCDHGA5--PCDHGA12^PCDHGA5^ENSG00000253485.2" ; ccdsid "CCDS75333.1" ; exon_id "ENSE00003746232.1" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGA12^PCDHGA5^ENSG00000253485.2" ; gene_name PCDHGA5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163683.2" ; havana_transcript "OTTHUMT00000476686.1" ; hgnc_id "HGNC:8703" ; level 2 ; orig_coord_info "chr5,141364331,141366769,+" ; protein_id "ENSP00000480337.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA5--PCDHGA12^ENST00000611914.1" ; transcript_name "PCDHGA5-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA5--PCDHGA12 HAVANA mRNA 1001 4552 . + . FI_gene_label "PCDHGA5^ENSG00000253485.2" ; ID "PCDHGA5--PCDHGA12^ENST00000611914.1" ; Parent "PCDHGA5--PCDHGA12^PCDHGA5^ENSG00000253485.2" ; ccdsid "CCDS75333.1" ; exon_id "ENSE00003746232.1" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGA12^PCDHGA5^ENSG00000253485.2" ; gene_name PCDHGA5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163683.2" ; havana_transcript "OTTHUMT00000476686.1" ; hgnc_id "HGNC:8703" ; level 2 ; orig_coord_info "chr5,141364331,141366769,+" ; protein_id "ENSP00000480337.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA5--PCDHGA12^ENST00000611914.1" ; transcript_name "PCDHGA5-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGA5--PCDHGA8 HAVANA gene 10029 19209 . + . FI_gene_label "PCDHGA8^ENSG00000253767.3" ; ID "PCDHGA5--PCDHGA8^PCDHGA8^ENSG00000253767.3" ; ccdsid "CCDS47291.1" ; exon_id "ENSE00001533882.3" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGA8^PCDHGA8^ENSG00000253767.3" ; gene_name PCDHGA8 ; gene_type protein_coding ; havana_gene "OTTHUMG00000164053.2" ; havana_transcript "OTTHUMT00000376972.1" ; hgnc_id "HGNC:8706" ; level 2 ; orig_coord_info "chr5,141392814,141395237,+" ; protein_id "ENSP00000381605.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA5--PCDHGA8^ENST00000398604.3" ; transcript_name "PCDHGA8-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA5--PCDHGA8 HAVANA mRNA 10029 19209 . + . FI_gene_label "PCDHGA8^ENSG00000253767.3" ; ID "PCDHGA5--PCDHGA8^ENST00000398604.3" ; Parent "PCDHGA5--PCDHGA8^PCDHGA8^ENSG00000253767.3" ; ccdsid "CCDS47291.1" ; exon_id "ENSE00001533882.3" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGA8^PCDHGA8^ENSG00000253767.3" ; gene_name PCDHGA8 ; gene_type protein_coding ; havana_gene "OTTHUMG00000164053.2" ; havana_transcript "OTTHUMT00000376972.1" ; hgnc_id "HGNC:8706" ; level 2 ; orig_coord_info "chr5,141392814,141395237,+" ; protein_id "ENSP00000381605.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA5--PCDHGA8^ENST00000398604.3" ; transcript_name "PCDHGA8-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA5--PCDHGA8 HAVANA gene 1001 4552 . + . FI_gene_label "PCDHGA5^ENSG00000253485.2" ; ID "PCDHGA5--PCDHGA8^PCDHGA5^ENSG00000253485.2" ; ccdsid "CCDS75333.1" ; exon_id "ENSE00003746232.1" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGA8^PCDHGA5^ENSG00000253485.2" ; gene_name PCDHGA5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163683.2" ; havana_transcript "OTTHUMT00000476686.1" ; hgnc_id "HGNC:8703" ; level 2 ; orig_coord_info "chr5,141364331,141366769,+" ; protein_id "ENSP00000480337.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA5--PCDHGA8^ENST00000611914.1" ; transcript_name "PCDHGA5-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA5--PCDHGA8 HAVANA mRNA 1001 4552 . + . FI_gene_label "PCDHGA5^ENSG00000253485.2" ; ID "PCDHGA5--PCDHGA8^ENST00000611914.1" ; Parent "PCDHGA5--PCDHGA8^PCDHGA5^ENSG00000253485.2" ; ccdsid "CCDS75333.1" ; exon_id "ENSE00003746232.1" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGA8^PCDHGA5^ENSG00000253485.2" ; gene_name PCDHGA5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163683.2" ; havana_transcript "OTTHUMT00000476686.1" ; hgnc_id "HGNC:8703" ; level 2 ; orig_coord_info "chr5,141364331,141366769,+" ; protein_id "ENSP00000480337.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA5--PCDHGA8^ENST00000611914.1" ; transcript_name "PCDHGA5-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGA5--PCDHGA9 HAVANA gene 7574 15301 . + . FI_gene_label "PCDHGA9^ENSG00000261934.2" ; ID "PCDHGA5--PCDHGA9^PCDHGA9^ENSG00000261934.2" ; ccdsid "CCDS58981.1" ; exon_id "ENSE00002639131.1" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGA9^PCDHGA9^ENSG00000261934.2" ; gene_name PCDHGA9 ; gene_type protein_coding ; havana_gene "OTTHUMG00000177473.2" ; havana_transcript "OTTHUMT00000437105.1" ; hgnc_id "HGNC:8707" ; level 2 ; orig_coord_info "chr5,141402953,141405376,+" ; protein_id "ENSP00000460274.1" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGA5--PCDHGA9^ENST00000573521.1" ; transcript_name "PCDHGA9-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA5--PCDHGA9 HAVANA mRNA 7574 15301 . + . FI_gene_label "PCDHGA9^ENSG00000261934.2" ; ID "PCDHGA5--PCDHGA9^ENST00000573521.1" ; Parent "PCDHGA5--PCDHGA9^PCDHGA9^ENSG00000261934.2" ; ccdsid "CCDS58981.1" ; exon_id "ENSE00002639131.1" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGA9^PCDHGA9^ENSG00000261934.2" ; gene_name PCDHGA9 ; gene_type protein_coding ; havana_gene "OTTHUMG00000177473.2" ; havana_transcript "OTTHUMT00000437105.1" ; hgnc_id "HGNC:8707" ; level 2 ; orig_coord_info "chr5,141402953,141405376,+" ; protein_id "ENSP00000460274.1" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGA5--PCDHGA9^ENST00000573521.1" ; transcript_name "PCDHGA9-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA5--PCDHGA9 HAVANA gene 1001 4552 . + . FI_gene_label "PCDHGA5^ENSG00000253485.2" ; ID "PCDHGA5--PCDHGA9^PCDHGA5^ENSG00000253485.2" ; ccdsid "CCDS75333.1" ; exon_id "ENSE00003746232.1" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGA9^PCDHGA5^ENSG00000253485.2" ; gene_name PCDHGA5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163683.2" ; havana_transcript "OTTHUMT00000476686.1" ; hgnc_id "HGNC:8703" ; level 2 ; orig_coord_info "chr5,141364331,141366769,+" ; protein_id "ENSP00000480337.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA5--PCDHGA9^ENST00000611914.1" ; transcript_name "PCDHGA5-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA5--PCDHGA9 HAVANA mRNA 1001 4552 . + . FI_gene_label "PCDHGA5^ENSG00000253485.2" ; ID "PCDHGA5--PCDHGA9^ENST00000611914.1" ; Parent "PCDHGA5--PCDHGA9^PCDHGA5^ENSG00000253485.2" ; ccdsid "CCDS75333.1" ; exon_id "ENSE00003746232.1" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGA9^PCDHGA5^ENSG00000253485.2" ; gene_name PCDHGA5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163683.2" ; havana_transcript "OTTHUMT00000476686.1" ; hgnc_id "HGNC:8703" ; level 2 ; orig_coord_info "chr5,141364331,141366769,+" ; protein_id "ENSP00000480337.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA5--PCDHGA9^ENST00000611914.1" ; transcript_name "PCDHGA5-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGA5--PCDHGB6 HAVANA gene 7735 17334 . + . FI_gene_label "PCDHGB6^ENSG00000253305.2" ; ID "PCDHGA5--PCDHGB6^PCDHGB6^ENSG00000253305.2" ; ccdsid "CCDS54929.1" ; exon_id "ENSE00002122685.1" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGB6^PCDHGB6^ENSG00000253305.2" ; gene_name PCDHGB6 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163687.2" ; havana_transcript "OTTHUMT00000374746.1" ; hgnc_id "HGNC:8713" ; level 2 ; orig_coord_info "chr5,141408203,141410620,+" ; protein_id "ENSP00000428603.1" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGA5--PCDHGB6^ENST00000520790.1" ; transcript_name "PCDHGB6-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA5--PCDHGB6 HAVANA mRNA 7735 17334 . + . FI_gene_label "PCDHGB6^ENSG00000253305.2" ; ID "PCDHGA5--PCDHGB6^ENST00000520790.1" ; Parent "PCDHGA5--PCDHGB6^PCDHGB6^ENSG00000253305.2" ; ccdsid "CCDS54929.1" ; exon_id "ENSE00002122685.1" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGB6^PCDHGB6^ENSG00000253305.2" ; gene_name PCDHGB6 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163687.2" ; havana_transcript "OTTHUMT00000374746.1" ; hgnc_id "HGNC:8713" ; level 2 ; orig_coord_info "chr5,141408203,141410620,+" ; protein_id "ENSP00000428603.1" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGA5--PCDHGB6^ENST00000520790.1" ; transcript_name "PCDHGB6-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA5--PCDHGB6 HAVANA gene 1001 4552 . + . FI_gene_label "PCDHGA5^ENSG00000253485.2" ; ID "PCDHGA5--PCDHGB6^PCDHGA5^ENSG00000253485.2" ; ccdsid "CCDS75333.1" ; exon_id "ENSE00003746232.1" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGB6^PCDHGA5^ENSG00000253485.2" ; gene_name PCDHGA5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163683.2" ; havana_transcript "OTTHUMT00000476686.1" ; hgnc_id "HGNC:8703" ; level 2 ; orig_coord_info "chr5,141364331,141366769,+" ; protein_id "ENSP00000480337.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA5--PCDHGB6^ENST00000611914.1" ; transcript_name "PCDHGA5-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA5--PCDHGB6 HAVANA mRNA 1001 4552 . + . FI_gene_label "PCDHGA5^ENSG00000253485.2" ; ID "PCDHGA5--PCDHGB6^ENST00000611914.1" ; Parent "PCDHGA5--PCDHGB6^PCDHGA5^ENSG00000253485.2" ; ccdsid "CCDS75333.1" ; exon_id "ENSE00003746232.1" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGB6^PCDHGA5^ENSG00000253485.2" ; gene_name PCDHGA5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163683.2" ; havana_transcript "OTTHUMT00000476686.1" ; hgnc_id "HGNC:8703" ; level 2 ; orig_coord_info "chr5,141364331,141366769,+" ; protein_id "ENSP00000480337.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA5--PCDHGB6^ENST00000611914.1" ; transcript_name "PCDHGA5-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGA5--PCDHGB7 HAVANA gene 7585 15514 . + . FI_gene_label "PCDHGB7^ENSG00000254122.3" ; ID "PCDHGA5--PCDHGB7^PCDHGB7^ENSG00000254122.3" ; ccdsid "CCDS47293.1" ; exon_id "ENSE00001533845.4" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGB7^PCDHGB7^ENSG00000254122.3" ; gene_name PCDHGB7 ; gene_type protein_coding ; havana_gene "OTTHUMG00000164054.2" ; havana_transcript "OTTHUMT00000376973.2" ; hgnc_id "HGNC:8714" ; level 2 ; orig_coord_info "chr5,141417860,141420274,+" ; protein_id "ENSP00000381594.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA5--PCDHGB7^ENST00000398594.4" ; transcript_name "PCDHGB7-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA5--PCDHGB7 HAVANA mRNA 7585 15514 . + . FI_gene_label "PCDHGB7^ENSG00000254122.3" ; ID "PCDHGA5--PCDHGB7^ENST00000398594.4" ; Parent "PCDHGA5--PCDHGB7^PCDHGB7^ENSG00000254122.3" ; ccdsid "CCDS47293.1" ; exon_id "ENSE00001533845.4" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGB7^PCDHGB7^ENSG00000254122.3" ; gene_name PCDHGB7 ; gene_type protein_coding ; havana_gene "OTTHUMG00000164054.2" ; havana_transcript "OTTHUMT00000376973.2" ; hgnc_id "HGNC:8714" ; level 2 ; orig_coord_info "chr5,141417860,141420274,+" ; protein_id "ENSP00000381594.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA5--PCDHGB7^ENST00000398594.4" ; transcript_name "PCDHGB7-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA5--PCDHGB7 HAVANA gene 1001 4552 . + . FI_gene_label "PCDHGA5^ENSG00000253485.2" ; ID "PCDHGA5--PCDHGB7^PCDHGA5^ENSG00000253485.2" ; ccdsid "CCDS75333.1" ; exon_id "ENSE00003746232.1" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGB7^PCDHGA5^ENSG00000253485.2" ; gene_name PCDHGA5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163683.2" ; havana_transcript "OTTHUMT00000476686.1" ; hgnc_id "HGNC:8703" ; level 2 ; orig_coord_info "chr5,141364331,141366769,+" ; protein_id "ENSP00000480337.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA5--PCDHGB7^ENST00000611914.1" ; transcript_name "PCDHGA5-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA5--PCDHGB7 HAVANA mRNA 1001 4552 . + . FI_gene_label "PCDHGA5^ENSG00000253485.2" ; ID "PCDHGA5--PCDHGB7^ENST00000611914.1" ; Parent "PCDHGA5--PCDHGB7^PCDHGA5^ENSG00000253485.2" ; ccdsid "CCDS75333.1" ; exon_id "ENSE00003746232.1" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGB7^PCDHGA5^ENSG00000253485.2" ; gene_name PCDHGA5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163683.2" ; havana_transcript "OTTHUMT00000476686.1" ; hgnc_id "HGNC:8703" ; level 2 ; orig_coord_info "chr5,141364331,141366769,+" ; protein_id "ENSP00000480337.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA5--PCDHGB7^ENST00000611914.1" ; transcript_name "PCDHGA5-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGA5--PCDHGC3 HAVANA gene 7572 17758 . + . FI_gene_label "PCDHGC3^ENSG00000240184.7" ; ID "PCDHGA5--PCDHGC3^PCDHGC3^ENSG00000240184.7" ; ccdsid "CCDS4261.1" ; exon_id "ENSE00001199459.7" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGC3^PCDHGC3^ENSG00000240184.7" ; gene_name PCDHGC3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129613.8" ; havana_transcript "OTTHUMT00000251808.5" ; hgnc_id "HGNC:8716" ; level 2 ; orig_coord_info "chr5,141476117,141478546,+" ; protein_id "ENSP00000312070.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA5--PCDHGC3^ENST00000308177.5" ; transcript_name "PCDHGC3-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA5--PCDHGC3 HAVANA mRNA 7572 17758 . + . FI_gene_label "PCDHGC3^ENSG00000240184.7" ; ID "PCDHGA5--PCDHGC3^ENST00000308177.5" ; Parent "PCDHGA5--PCDHGC3^PCDHGC3^ENSG00000240184.7" ; ccdsid "CCDS4261.1" ; exon_id "ENSE00001199459.7" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGC3^PCDHGC3^ENSG00000240184.7" ; gene_name PCDHGC3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129613.8" ; havana_transcript "OTTHUMT00000251808.5" ; hgnc_id "HGNC:8716" ; level 2 ; orig_coord_info "chr5,141476117,141478546,+" ; protein_id "ENSP00000312070.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA5--PCDHGC3^ENST00000308177.5" ; transcript_name "PCDHGC3-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA5--PCDHGC3 HAVANA gene 1001 4552 . + . FI_gene_label "PCDHGA5^ENSG00000253485.2" ; ID "PCDHGA5--PCDHGC3^PCDHGA5^ENSG00000253485.2" ; ccdsid "CCDS75333.1" ; exon_id "ENSE00003746232.1" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGC3^PCDHGA5^ENSG00000253485.2" ; gene_name PCDHGA5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163683.2" ; havana_transcript "OTTHUMT00000476686.1" ; hgnc_id "HGNC:8703" ; level 2 ; orig_coord_info "chr5,141364331,141366769,+" ; protein_id "ENSP00000480337.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA5--PCDHGC3^ENST00000611914.1" ; transcript_name "PCDHGA5-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA5--PCDHGC3 HAVANA mRNA 1001 4552 . + . FI_gene_label "PCDHGA5^ENSG00000253485.2" ; ID "PCDHGA5--PCDHGC3^ENST00000611914.1" ; Parent "PCDHGA5--PCDHGC3^PCDHGA5^ENSG00000253485.2" ; ccdsid "CCDS75333.1" ; exon_id "ENSE00003746232.1" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGC3^PCDHGA5^ENSG00000253485.2" ; gene_name PCDHGA5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163683.2" ; havana_transcript "OTTHUMT00000476686.1" ; hgnc_id "HGNC:8703" ; level 2 ; orig_coord_info "chr5,141364331,141366769,+" ; protein_id "ENSP00000480337.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA5--PCDHGC3^ENST00000611914.1" ; transcript_name "PCDHGA5-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGA5--PCDHGC4 HAVANA gene 7730 15526 . + . FI_gene_label "PCDHGC4^ENSG00000242419.5" ; ID "PCDHGA5--PCDHGC4^PCDHGC4^ENSG00000242419.5" ; ccdsid "CCDS4262.1" ; exon_id "ENSE00001162305.2" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGC4^PCDHGC4^ENSG00000242419.5" ; gene_name PCDHGC4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129625.4" ; havana_transcript "OTTHUMT00000251820.2" ; hgnc_id "HGNC:8717" ; level 2 ; orig_coord_info "chr5,141485174,141487615,+" ; protein_id "ENSP00000306918.1" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGA5--PCDHGC4^ENST00000306593.1" ; transcript_name "PCDHGC4-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA5--PCDHGC4 HAVANA mRNA 7730 15526 . + . FI_gene_label "PCDHGC4^ENSG00000242419.5" ; ID "PCDHGA5--PCDHGC4^ENST00000306593.1" ; Parent "PCDHGA5--PCDHGC4^PCDHGC4^ENSG00000242419.5" ; ccdsid "CCDS4262.1" ; exon_id "ENSE00001162305.2" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGC4^PCDHGC4^ENSG00000242419.5" ; gene_name PCDHGC4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129625.4" ; havana_transcript "OTTHUMT00000251820.2" ; hgnc_id "HGNC:8717" ; level 2 ; orig_coord_info "chr5,141485174,141487615,+" ; protein_id "ENSP00000306918.1" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGA5--PCDHGC4^ENST00000306593.1" ; transcript_name "PCDHGC4-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA5--PCDHGC4 HAVANA gene 1001 4552 . + . FI_gene_label "PCDHGA5^ENSG00000253485.2" ; ID "PCDHGA5--PCDHGC4^PCDHGA5^ENSG00000253485.2" ; ccdsid "CCDS75333.1" ; exon_id "ENSE00003746232.1" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGC4^PCDHGA5^ENSG00000253485.2" ; gene_name PCDHGA5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163683.2" ; havana_transcript "OTTHUMT00000476686.1" ; hgnc_id "HGNC:8703" ; level 2 ; orig_coord_info "chr5,141364331,141366769,+" ; protein_id "ENSP00000480337.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA5--PCDHGC4^ENST00000611914.1" ; transcript_name "PCDHGA5-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA5--PCDHGC4 HAVANA mRNA 1001 4552 . + . FI_gene_label "PCDHGA5^ENSG00000253485.2" ; ID "PCDHGA5--PCDHGC4^ENST00000611914.1" ; Parent "PCDHGA5--PCDHGC4^PCDHGA5^ENSG00000253485.2" ; ccdsid "CCDS75333.1" ; exon_id "ENSE00003746232.1" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGC4^PCDHGA5^ENSG00000253485.2" ; gene_name PCDHGA5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163683.2" ; havana_transcript "OTTHUMT00000476686.1" ; hgnc_id "HGNC:8703" ; level 2 ; orig_coord_info "chr5,141364331,141366769,+" ; protein_id "ENSP00000480337.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA5--PCDHGC4^ENST00000611914.1" ; transcript_name "PCDHGA5-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGA5--PCDHGC5 HAVANA gene 7553 15578 . + . FI_gene_label "PCDHGC5^ENSG00000240764.4" ; ID "PCDHGA5--PCDHGC5^PCDHGC5^ENSG00000240764.4" ; ccdsid "CCDS4263.1" ; exon_id "ENSE00000766474.3" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGC5^PCDHGC5^ENSG00000240764.4" ; gene_name PCDHGC5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129624.2" ; havana_transcript "OTTHUMT00000251819.2" ; hgnc_id "HGNC:8718" ; level 2 ; orig_coord_info "chr5,141489241,141491700,+" ; protein_id "ENSP00000252087.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA5--PCDHGC5^ENST00000252087.3" ; transcript_name "PCDHGC5-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA5--PCDHGC5 HAVANA mRNA 7553 15578 . + . FI_gene_label "PCDHGC5^ENSG00000240764.4" ; ID "PCDHGA5--PCDHGC5^ENST00000252087.3" ; Parent "PCDHGA5--PCDHGC5^PCDHGC5^ENSG00000240764.4" ; ccdsid "CCDS4263.1" ; exon_id "ENSE00000766474.3" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGC5^PCDHGC5^ENSG00000240764.4" ; gene_name PCDHGC5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129624.2" ; havana_transcript "OTTHUMT00000251819.2" ; hgnc_id "HGNC:8718" ; level 2 ; orig_coord_info "chr5,141489241,141491700,+" ; protein_id "ENSP00000252087.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA5--PCDHGC5^ENST00000252087.3" ; transcript_name "PCDHGC5-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA5--PCDHGC5 HAVANA gene 1001 4552 . + . FI_gene_label "PCDHGA5^ENSG00000253485.2" ; ID "PCDHGA5--PCDHGC5^PCDHGA5^ENSG00000253485.2" ; ccdsid "CCDS75333.1" ; exon_id "ENSE00003746232.1" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGC5^PCDHGA5^ENSG00000253485.2" ; gene_name PCDHGA5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163683.2" ; havana_transcript "OTTHUMT00000476686.1" ; hgnc_id "HGNC:8703" ; level 2 ; orig_coord_info "chr5,141364331,141366769,+" ; protein_id "ENSP00000480337.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA5--PCDHGC5^ENST00000611914.1" ; transcript_name "PCDHGA5-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA5--PCDHGC5 HAVANA mRNA 1001 4552 . + . FI_gene_label "PCDHGA5^ENSG00000253485.2" ; ID "PCDHGA5--PCDHGC5^ENST00000611914.1" ; Parent "PCDHGA5--PCDHGC5^PCDHGA5^ENSG00000253485.2" ; ccdsid "CCDS75333.1" ; exon_id "ENSE00003746232.1" ; exon_number 1 ; gene_id "PCDHGA5--PCDHGC5^PCDHGA5^ENSG00000253485.2" ; gene_name PCDHGA5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163683.2" ; havana_transcript "OTTHUMT00000476686.1" ; hgnc_id "HGNC:8703" ; level 2 ; orig_coord_info "chr5,141364331,141366769,+" ; protein_id "ENSP00000480337.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA5--PCDHGC5^ENST00000611914.1" ; transcript_name "PCDHGA5-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGA6--PCDHGA10 HAVANA gene 9840 19293 . + . FI_gene_label "PCDHGA10^ENSG00000253846.2" ; ID "PCDHGA6--PCDHGA10^PCDHGA10^ENSG00000253846.2" ; ccdsid "CCDS47292.1" ; exon_id "ENSE00001792208.1" ; exon_number 1 ; gene_id "PCDHGA6--PCDHGA10^PCDHGA10^ENSG00000253846.2" ; gene_name PCDHGA10 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163688.2" ; havana_transcript "OTTHUMT00000374747.1" ; hgnc_id "HGNC:8697" ; level 2 ; orig_coord_info "chr5,141413176,141415611,+" ; protein_id "ENSP00000381611.2" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGA6--PCDHGA10^ENST00000398610.2" ; transcript_name "PCDHGA10-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA6--PCDHGA10 HAVANA mRNA 9840 19293 . + . FI_gene_label "PCDHGA10^ENSG00000253846.2" ; ID "PCDHGA6--PCDHGA10^ENST00000398610.2" ; Parent "PCDHGA6--PCDHGA10^PCDHGA10^ENSG00000253846.2" ; ccdsid "CCDS47292.1" ; exon_id "ENSE00001792208.1" ; exon_number 1 ; gene_id "PCDHGA6--PCDHGA10^PCDHGA10^ENSG00000253846.2" ; gene_name PCDHGA10 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163688.2" ; havana_transcript "OTTHUMT00000374747.1" ; hgnc_id "HGNC:8697" ; level 2 ; orig_coord_info "chr5,141413176,141415611,+" ; protein_id "ENSP00000381611.2" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGA6--PCDHGA10^ENST00000398610.2" ; transcript_name "PCDHGA10-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA6--PCDHGA10 HAVANA gene 1001 6650 . + . FI_gene_label "PCDHGA6^ENSG00000253731.3" ; ID "PCDHGA6--PCDHGA10^PCDHGA6^ENSG00000253731.3" ; ccdsid "CCDS75335.1" ; exon_id "ENSE00003746318.1" ; exon_number 1 ; gene_id "PCDHGA6--PCDHGA10^PCDHGA6^ENSG00000253731.3" ; gene_name PCDHGA6 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163684.2" ; havana_transcript "OTTHUMT00000476688.1" ; hgnc_id "HGNC:8704" ; level 2 ; orig_coord_info "chr5,141374084,141376537,+" ; protein_id "ENSP00000479478.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA6--PCDHGA10^ENST00000610583.1" ; transcript_name "PCDHGA6-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA6--PCDHGA10 HAVANA mRNA 1001 6650 . + . FI_gene_label "PCDHGA6^ENSG00000253731.3" ; ID "PCDHGA6--PCDHGA10^ENST00000610583.1" ; Parent "PCDHGA6--PCDHGA10^PCDHGA6^ENSG00000253731.3" ; ccdsid "CCDS75335.1" ; exon_id "ENSE00003746318.1" ; exon_number 1 ; gene_id "PCDHGA6--PCDHGA10^PCDHGA6^ENSG00000253731.3" ; gene_name PCDHGA6 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163684.2" ; havana_transcript "OTTHUMT00000476688.1" ; hgnc_id "HGNC:8704" ; level 2 ; orig_coord_info "chr5,141374084,141376537,+" ; protein_id "ENSP00000479478.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA6--PCDHGA10^ENST00000610583.1" ; transcript_name "PCDHGA6-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGA6--PCDHGA11 HAVANA gene 9655 18460 . + . FI_gene_label "PCDHGA11^ENSG00000253873.6" ; ID "PCDHGA6--PCDHGA11^PCDHGA11^ENSG00000253873.6" ; ccdsid "CCDS47294.1" ; exon_id "ENSE00001533810.3" ; exon_number 1 ; gene_id "PCDHGA6--PCDHGA11^PCDHGA11^ENSG00000253873.6" ; gene_name PCDHGA11 ; gene_type protein_coding ; havana_gene "OTTHUMG00000164055.3" ; havana_transcript "OTTHUMT00000376974.3" ; hgnc_id "HGNC:8698" ; level 2 ; orig_coord_info "chr5,141421228,141423660,+" ; protein_id "ENSP00000381589.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA6--PCDHGA11^ENST00000398587.7" ; transcript_name "PCDHGA11-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA6--PCDHGA11 HAVANA mRNA 9655 18460 . + . FI_gene_label "PCDHGA11^ENSG00000253873.6" ; ID "PCDHGA6--PCDHGA11^ENST00000398587.7" ; Parent "PCDHGA6--PCDHGA11^PCDHGA11^ENSG00000253873.6" ; ccdsid "CCDS47294.1" ; exon_id "ENSE00001533810.3" ; exon_number 1 ; gene_id "PCDHGA6--PCDHGA11^PCDHGA11^ENSG00000253873.6" ; gene_name PCDHGA11 ; gene_type protein_coding ; havana_gene "OTTHUMG00000164055.3" ; havana_transcript "OTTHUMT00000376974.3" ; hgnc_id "HGNC:8698" ; level 2 ; orig_coord_info "chr5,141421228,141423660,+" ; protein_id "ENSP00000381589.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA6--PCDHGA11^ENST00000398587.7" ; transcript_name "PCDHGA11-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA6--PCDHGA11 HAVANA gene 1001 6650 . + . FI_gene_label "PCDHGA6^ENSG00000253731.3" ; ID "PCDHGA6--PCDHGA11^PCDHGA6^ENSG00000253731.3" ; ccdsid "CCDS75335.1" ; exon_id "ENSE00003746318.1" ; exon_number 1 ; gene_id "PCDHGA6--PCDHGA11^PCDHGA6^ENSG00000253731.3" ; gene_name PCDHGA6 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163684.2" ; havana_transcript "OTTHUMT00000476688.1" ; hgnc_id "HGNC:8704" ; level 2 ; orig_coord_info "chr5,141374084,141376537,+" ; protein_id "ENSP00000479478.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA6--PCDHGA11^ENST00000610583.1" ; transcript_name "PCDHGA6-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA6--PCDHGA11 HAVANA mRNA 1001 6650 . + . FI_gene_label "PCDHGA6^ENSG00000253731.3" ; ID "PCDHGA6--PCDHGA11^ENST00000610583.1" ; Parent "PCDHGA6--PCDHGA11^PCDHGA6^ENSG00000253731.3" ; ccdsid "CCDS75335.1" ; exon_id "ENSE00003746318.1" ; exon_number 1 ; gene_id "PCDHGA6--PCDHGA11^PCDHGA6^ENSG00000253731.3" ; gene_name PCDHGA6 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163684.2" ; havana_transcript "OTTHUMT00000476688.1" ; hgnc_id "HGNC:8704" ; level 2 ; orig_coord_info "chr5,141374084,141376537,+" ; protein_id "ENSP00000479478.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA6--PCDHGA11^ENST00000610583.1" ; transcript_name "PCDHGA6-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGA6--PCDHGA12 HAVANA gene 9651 17543 . + . FI_gene_label "PCDHGA12^ENSG00000253159.3" ; ID "PCDHGA6--PCDHGA12^PCDHGA12^ENSG00000253159.3" ; ccdsid "CCDS4260.1" ; exon_id "ENSE00000814269.5" ; exon_number 1 ; gene_id "PCDHGA6--PCDHGA12^PCDHGA12^ENSG00000253159.3" ; gene_name PCDHGA12 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129611.6" ; havana_transcript "OTTHUMT00000251806.3" ; hgnc_id "HGNC:8699" ; level 2 ; orig_coord_info "chr5,141430760,141433183,+" ; protein_id "ENSP00000252085.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA6--PCDHGA12^ENST00000252085.4" ; transcript_name "PCDHGA12-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA6--PCDHGA12 HAVANA mRNA 9651 17543 . + . FI_gene_label "PCDHGA12^ENSG00000253159.3" ; ID "PCDHGA6--PCDHGA12^ENST00000252085.4" ; Parent "PCDHGA6--PCDHGA12^PCDHGA12^ENSG00000253159.3" ; ccdsid "CCDS4260.1" ; exon_id "ENSE00000814269.5" ; exon_number 1 ; gene_id "PCDHGA6--PCDHGA12^PCDHGA12^ENSG00000253159.3" ; gene_name PCDHGA12 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129611.6" ; havana_transcript "OTTHUMT00000251806.3" ; hgnc_id "HGNC:8699" ; level 2 ; orig_coord_info "chr5,141430760,141433183,+" ; protein_id "ENSP00000252085.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA6--PCDHGA12^ENST00000252085.4" ; transcript_name "PCDHGA12-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA6--PCDHGA12 HAVANA gene 1001 6650 . + . FI_gene_label "PCDHGA6^ENSG00000253731.3" ; ID "PCDHGA6--PCDHGA12^PCDHGA6^ENSG00000253731.3" ; ccdsid "CCDS75335.1" ; exon_id "ENSE00003746318.1" ; exon_number 1 ; gene_id "PCDHGA6--PCDHGA12^PCDHGA6^ENSG00000253731.3" ; gene_name PCDHGA6 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163684.2" ; havana_transcript "OTTHUMT00000476688.1" ; hgnc_id "HGNC:8704" ; level 2 ; orig_coord_info "chr5,141374084,141376537,+" ; protein_id "ENSP00000479478.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA6--PCDHGA12^ENST00000610583.1" ; transcript_name "PCDHGA6-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA6--PCDHGA12 HAVANA mRNA 1001 6650 . + . FI_gene_label "PCDHGA6^ENSG00000253731.3" ; ID "PCDHGA6--PCDHGA12^ENST00000610583.1" ; Parent "PCDHGA6--PCDHGA12^PCDHGA6^ENSG00000253731.3" ; ccdsid "CCDS75335.1" ; exon_id "ENSE00003746318.1" ; exon_number 1 ; gene_id "PCDHGA6--PCDHGA12^PCDHGA6^ENSG00000253731.3" ; gene_name PCDHGA6 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163684.2" ; havana_transcript "OTTHUMT00000476688.1" ; hgnc_id "HGNC:8704" ; level 2 ; orig_coord_info "chr5,141374084,141376537,+" ; protein_id "ENSP00000479478.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA6--PCDHGA12^ENST00000610583.1" ; transcript_name "PCDHGA6-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGA6--PCDHGA8 HAVANA gene 12127 21307 . + . FI_gene_label "PCDHGA8^ENSG00000253767.3" ; ID "PCDHGA6--PCDHGA8^PCDHGA8^ENSG00000253767.3" ; ccdsid "CCDS47291.1" ; exon_id "ENSE00001533882.3" ; exon_number 1 ; gene_id "PCDHGA6--PCDHGA8^PCDHGA8^ENSG00000253767.3" ; gene_name PCDHGA8 ; gene_type protein_coding ; havana_gene "OTTHUMG00000164053.2" ; havana_transcript "OTTHUMT00000376972.1" ; hgnc_id "HGNC:8706" ; level 2 ; orig_coord_info "chr5,141392814,141395237,+" ; protein_id "ENSP00000381605.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA6--PCDHGA8^ENST00000398604.3" ; transcript_name "PCDHGA8-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA6--PCDHGA8 HAVANA mRNA 12127 21307 . + . FI_gene_label "PCDHGA8^ENSG00000253767.3" ; ID "PCDHGA6--PCDHGA8^ENST00000398604.3" ; Parent "PCDHGA6--PCDHGA8^PCDHGA8^ENSG00000253767.3" ; ccdsid "CCDS47291.1" ; exon_id "ENSE00001533882.3" ; exon_number 1 ; gene_id "PCDHGA6--PCDHGA8^PCDHGA8^ENSG00000253767.3" ; gene_name PCDHGA8 ; gene_type protein_coding ; havana_gene "OTTHUMG00000164053.2" ; havana_transcript "OTTHUMT00000376972.1" ; hgnc_id "HGNC:8706" ; level 2 ; orig_coord_info "chr5,141392814,141395237,+" ; protein_id "ENSP00000381605.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA6--PCDHGA8^ENST00000398604.3" ; transcript_name "PCDHGA8-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA6--PCDHGA8 HAVANA gene 1001 6650 . + . FI_gene_label "PCDHGA6^ENSG00000253731.3" ; ID "PCDHGA6--PCDHGA8^PCDHGA6^ENSG00000253731.3" ; ccdsid "CCDS75335.1" ; exon_id "ENSE00003746318.1" ; exon_number 1 ; gene_id "PCDHGA6--PCDHGA8^PCDHGA6^ENSG00000253731.3" ; gene_name PCDHGA6 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163684.2" ; havana_transcript "OTTHUMT00000476688.1" ; hgnc_id "HGNC:8704" ; level 2 ; orig_coord_info "chr5,141374084,141376537,+" ; protein_id "ENSP00000479478.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA6--PCDHGA8^ENST00000610583.1" ; transcript_name "PCDHGA6-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA6--PCDHGA8 HAVANA mRNA 1001 6650 . + . FI_gene_label "PCDHGA6^ENSG00000253731.3" ; ID "PCDHGA6--PCDHGA8^ENST00000610583.1" ; Parent "PCDHGA6--PCDHGA8^PCDHGA6^ENSG00000253731.3" ; ccdsid "CCDS75335.1" ; exon_id "ENSE00003746318.1" ; exon_number 1 ; gene_id "PCDHGA6--PCDHGA8^PCDHGA6^ENSG00000253731.3" ; gene_name PCDHGA6 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163684.2" ; havana_transcript "OTTHUMT00000476688.1" ; hgnc_id "HGNC:8704" ; level 2 ; orig_coord_info "chr5,141374084,141376537,+" ; protein_id "ENSP00000479478.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA6--PCDHGA8^ENST00000610583.1" ; transcript_name "PCDHGA6-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGA6--PCDHGA9 HAVANA gene 9672 17399 . + . FI_gene_label "PCDHGA9^ENSG00000261934.2" ; ID "PCDHGA6--PCDHGA9^PCDHGA9^ENSG00000261934.2" ; ccdsid "CCDS58981.1" ; exon_id "ENSE00002639131.1" ; exon_number 1 ; gene_id "PCDHGA6--PCDHGA9^PCDHGA9^ENSG00000261934.2" ; gene_name PCDHGA9 ; gene_type protein_coding ; havana_gene "OTTHUMG00000177473.2" ; havana_transcript "OTTHUMT00000437105.1" ; hgnc_id "HGNC:8707" ; level 2 ; orig_coord_info "chr5,141402953,141405376,+" ; protein_id "ENSP00000460274.1" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGA6--PCDHGA9^ENST00000573521.1" ; transcript_name "PCDHGA9-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA6--PCDHGA9 HAVANA mRNA 9672 17399 . + . FI_gene_label "PCDHGA9^ENSG00000261934.2" ; ID "PCDHGA6--PCDHGA9^ENST00000573521.1" ; Parent "PCDHGA6--PCDHGA9^PCDHGA9^ENSG00000261934.2" ; ccdsid "CCDS58981.1" ; exon_id "ENSE00002639131.1" ; exon_number 1 ; gene_id "PCDHGA6--PCDHGA9^PCDHGA9^ENSG00000261934.2" ; gene_name PCDHGA9 ; gene_type protein_coding ; havana_gene "OTTHUMG00000177473.2" ; havana_transcript "OTTHUMT00000437105.1" ; hgnc_id "HGNC:8707" ; level 2 ; orig_coord_info "chr5,141402953,141405376,+" ; protein_id "ENSP00000460274.1" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGA6--PCDHGA9^ENST00000573521.1" ; transcript_name "PCDHGA9-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA6--PCDHGA9 HAVANA gene 1001 6650 . + . FI_gene_label "PCDHGA6^ENSG00000253731.3" ; ID "PCDHGA6--PCDHGA9^PCDHGA6^ENSG00000253731.3" ; ccdsid "CCDS75335.1" ; exon_id "ENSE00003746318.1" ; exon_number 1 ; gene_id "PCDHGA6--PCDHGA9^PCDHGA6^ENSG00000253731.3" ; gene_name PCDHGA6 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163684.2" ; havana_transcript "OTTHUMT00000476688.1" ; hgnc_id "HGNC:8704" ; level 2 ; orig_coord_info "chr5,141374084,141376537,+" ; protein_id "ENSP00000479478.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA6--PCDHGA9^ENST00000610583.1" ; transcript_name "PCDHGA6-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA6--PCDHGA9 HAVANA mRNA 1001 6650 . + . FI_gene_label "PCDHGA6^ENSG00000253731.3" ; ID "PCDHGA6--PCDHGA9^ENST00000610583.1" ; Parent "PCDHGA6--PCDHGA9^PCDHGA6^ENSG00000253731.3" ; ccdsid "CCDS75335.1" ; exon_id "ENSE00003746318.1" ; exon_number 1 ; gene_id "PCDHGA6--PCDHGA9^PCDHGA6^ENSG00000253731.3" ; gene_name PCDHGA6 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163684.2" ; havana_transcript "OTTHUMT00000476688.1" ; hgnc_id "HGNC:8704" ; level 2 ; orig_coord_info "chr5,141374084,141376537,+" ; protein_id "ENSP00000479478.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA6--PCDHGA9^ENST00000610583.1" ; transcript_name "PCDHGA6-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGA6--PCDHGB6 HAVANA gene 9833 19432 . + . FI_gene_label "PCDHGB6^ENSG00000253305.2" ; ID "PCDHGA6--PCDHGB6^PCDHGB6^ENSG00000253305.2" ; ccdsid "CCDS54929.1" ; exon_id "ENSE00002122685.1" ; exon_number 1 ; gene_id "PCDHGA6--PCDHGB6^PCDHGB6^ENSG00000253305.2" ; gene_name PCDHGB6 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163687.2" ; havana_transcript "OTTHUMT00000374746.1" ; hgnc_id "HGNC:8713" ; level 2 ; orig_coord_info "chr5,141408203,141410620,+" ; protein_id "ENSP00000428603.1" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGA6--PCDHGB6^ENST00000520790.1" ; transcript_name "PCDHGB6-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA6--PCDHGB6 HAVANA mRNA 9833 19432 . + . FI_gene_label "PCDHGB6^ENSG00000253305.2" ; ID "PCDHGA6--PCDHGB6^ENST00000520790.1" ; Parent "PCDHGA6--PCDHGB6^PCDHGB6^ENSG00000253305.2" ; ccdsid "CCDS54929.1" ; exon_id "ENSE00002122685.1" ; exon_number 1 ; gene_id "PCDHGA6--PCDHGB6^PCDHGB6^ENSG00000253305.2" ; gene_name PCDHGB6 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163687.2" ; havana_transcript "OTTHUMT00000374746.1" ; hgnc_id "HGNC:8713" ; level 2 ; orig_coord_info "chr5,141408203,141410620,+" ; protein_id "ENSP00000428603.1" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGA6--PCDHGB6^ENST00000520790.1" ; transcript_name "PCDHGB6-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA6--PCDHGB6 HAVANA gene 1001 6650 . + . FI_gene_label "PCDHGA6^ENSG00000253731.3" ; ID "PCDHGA6--PCDHGB6^PCDHGA6^ENSG00000253731.3" ; ccdsid "CCDS75335.1" ; exon_id "ENSE00003746318.1" ; exon_number 1 ; gene_id "PCDHGA6--PCDHGB6^PCDHGA6^ENSG00000253731.3" ; gene_name PCDHGA6 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163684.2" ; havana_transcript "OTTHUMT00000476688.1" ; hgnc_id "HGNC:8704" ; level 2 ; orig_coord_info "chr5,141374084,141376537,+" ; protein_id "ENSP00000479478.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA6--PCDHGB6^ENST00000610583.1" ; transcript_name "PCDHGA6-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA6--PCDHGB6 HAVANA mRNA 1001 6650 . + . FI_gene_label "PCDHGA6^ENSG00000253731.3" ; ID "PCDHGA6--PCDHGB6^ENST00000610583.1" ; Parent "PCDHGA6--PCDHGB6^PCDHGA6^ENSG00000253731.3" ; ccdsid "CCDS75335.1" ; exon_id "ENSE00003746318.1" ; exon_number 1 ; gene_id "PCDHGA6--PCDHGB6^PCDHGA6^ENSG00000253731.3" ; gene_name PCDHGA6 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163684.2" ; havana_transcript "OTTHUMT00000476688.1" ; hgnc_id "HGNC:8704" ; level 2 ; orig_coord_info "chr5,141374084,141376537,+" ; protein_id "ENSP00000479478.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA6--PCDHGB6^ENST00000610583.1" ; transcript_name "PCDHGA6-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGA6--PCDHGB7 HAVANA gene 9683 17612 . + . FI_gene_label "PCDHGB7^ENSG00000254122.3" ; ID "PCDHGA6--PCDHGB7^PCDHGB7^ENSG00000254122.3" ; ccdsid "CCDS47293.1" ; exon_id "ENSE00001533845.4" ; exon_number 1 ; gene_id "PCDHGA6--PCDHGB7^PCDHGB7^ENSG00000254122.3" ; gene_name PCDHGB7 ; gene_type protein_coding ; havana_gene "OTTHUMG00000164054.2" ; havana_transcript "OTTHUMT00000376973.2" ; hgnc_id "HGNC:8714" ; level 2 ; orig_coord_info "chr5,141417860,141420274,+" ; protein_id "ENSP00000381594.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA6--PCDHGB7^ENST00000398594.4" ; transcript_name "PCDHGB7-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA6--PCDHGB7 HAVANA mRNA 9683 17612 . + . FI_gene_label "PCDHGB7^ENSG00000254122.3" ; ID "PCDHGA6--PCDHGB7^ENST00000398594.4" ; Parent "PCDHGA6--PCDHGB7^PCDHGB7^ENSG00000254122.3" ; ccdsid "CCDS47293.1" ; exon_id "ENSE00001533845.4" ; exon_number 1 ; gene_id "PCDHGA6--PCDHGB7^PCDHGB7^ENSG00000254122.3" ; gene_name PCDHGB7 ; gene_type protein_coding ; havana_gene "OTTHUMG00000164054.2" ; havana_transcript "OTTHUMT00000376973.2" ; hgnc_id "HGNC:8714" ; level 2 ; orig_coord_info "chr5,141417860,141420274,+" ; protein_id "ENSP00000381594.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA6--PCDHGB7^ENST00000398594.4" ; transcript_name "PCDHGB7-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA6--PCDHGB7 HAVANA gene 1001 6650 . + . FI_gene_label "PCDHGA6^ENSG00000253731.3" ; ID "PCDHGA6--PCDHGB7^PCDHGA6^ENSG00000253731.3" ; ccdsid "CCDS75335.1" ; exon_id "ENSE00003746318.1" ; exon_number 1 ; gene_id "PCDHGA6--PCDHGB7^PCDHGA6^ENSG00000253731.3" ; gene_name PCDHGA6 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163684.2" ; havana_transcript "OTTHUMT00000476688.1" ; hgnc_id "HGNC:8704" ; level 2 ; orig_coord_info "chr5,141374084,141376537,+" ; protein_id "ENSP00000479478.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA6--PCDHGB7^ENST00000610583.1" ; transcript_name "PCDHGA6-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA6--PCDHGB7 HAVANA mRNA 1001 6650 . + . FI_gene_label "PCDHGA6^ENSG00000253731.3" ; ID "PCDHGA6--PCDHGB7^ENST00000610583.1" ; Parent "PCDHGA6--PCDHGB7^PCDHGA6^ENSG00000253731.3" ; ccdsid "CCDS75335.1" ; exon_id "ENSE00003746318.1" ; exon_number 1 ; gene_id "PCDHGA6--PCDHGB7^PCDHGA6^ENSG00000253731.3" ; gene_name PCDHGA6 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163684.2" ; havana_transcript "OTTHUMT00000476688.1" ; hgnc_id "HGNC:8704" ; level 2 ; orig_coord_info "chr5,141374084,141376537,+" ; protein_id "ENSP00000479478.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA6--PCDHGB7^ENST00000610583.1" ; transcript_name "PCDHGA6-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGA6--PCDHGC3 HAVANA gene 9670 19856 . + . FI_gene_label "PCDHGC3^ENSG00000240184.7" ; ID "PCDHGA6--PCDHGC3^PCDHGC3^ENSG00000240184.7" ; ccdsid "CCDS4261.1" ; exon_id "ENSE00001199459.7" ; exon_number 1 ; gene_id "PCDHGA6--PCDHGC3^PCDHGC3^ENSG00000240184.7" ; gene_name PCDHGC3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129613.8" ; havana_transcript "OTTHUMT00000251808.5" ; hgnc_id "HGNC:8716" ; level 2 ; orig_coord_info "chr5,141476117,141478546,+" ; protein_id "ENSP00000312070.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA6--PCDHGC3^ENST00000308177.5" ; transcript_name "PCDHGC3-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA6--PCDHGC3 HAVANA mRNA 9670 19856 . + . FI_gene_label "PCDHGC3^ENSG00000240184.7" ; ID "PCDHGA6--PCDHGC3^ENST00000308177.5" ; Parent "PCDHGA6--PCDHGC3^PCDHGC3^ENSG00000240184.7" ; ccdsid "CCDS4261.1" ; exon_id "ENSE00001199459.7" ; exon_number 1 ; gene_id "PCDHGA6--PCDHGC3^PCDHGC3^ENSG00000240184.7" ; gene_name PCDHGC3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129613.8" ; havana_transcript "OTTHUMT00000251808.5" ; hgnc_id "HGNC:8716" ; level 2 ; orig_coord_info "chr5,141476117,141478546,+" ; protein_id "ENSP00000312070.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA6--PCDHGC3^ENST00000308177.5" ; transcript_name "PCDHGC3-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA6--PCDHGC3 HAVANA gene 1001 6650 . + . FI_gene_label "PCDHGA6^ENSG00000253731.3" ; ID "PCDHGA6--PCDHGC3^PCDHGA6^ENSG00000253731.3" ; ccdsid "CCDS75335.1" ; exon_id "ENSE00003746318.1" ; exon_number 1 ; gene_id "PCDHGA6--PCDHGC3^PCDHGA6^ENSG00000253731.3" ; gene_name PCDHGA6 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163684.2" ; havana_transcript "OTTHUMT00000476688.1" ; hgnc_id "HGNC:8704" ; level 2 ; orig_coord_info "chr5,141374084,141376537,+" ; protein_id "ENSP00000479478.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA6--PCDHGC3^ENST00000610583.1" ; transcript_name "PCDHGA6-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA6--PCDHGC3 HAVANA mRNA 1001 6650 . + . FI_gene_label "PCDHGA6^ENSG00000253731.3" ; ID "PCDHGA6--PCDHGC3^ENST00000610583.1" ; Parent "PCDHGA6--PCDHGC3^PCDHGA6^ENSG00000253731.3" ; ccdsid "CCDS75335.1" ; exon_id "ENSE00003746318.1" ; exon_number 1 ; gene_id "PCDHGA6--PCDHGC3^PCDHGA6^ENSG00000253731.3" ; gene_name PCDHGA6 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163684.2" ; havana_transcript "OTTHUMT00000476688.1" ; hgnc_id "HGNC:8704" ; level 2 ; orig_coord_info "chr5,141374084,141376537,+" ; protein_id "ENSP00000479478.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA6--PCDHGC3^ENST00000610583.1" ; transcript_name "PCDHGA6-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGA6--PCDHGC4 HAVANA gene 9828 17624 . + . FI_gene_label "PCDHGC4^ENSG00000242419.5" ; ID "PCDHGA6--PCDHGC4^PCDHGC4^ENSG00000242419.5" ; ccdsid "CCDS4262.1" ; exon_id "ENSE00001162305.2" ; exon_number 1 ; gene_id "PCDHGA6--PCDHGC4^PCDHGC4^ENSG00000242419.5" ; gene_name PCDHGC4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129625.4" ; havana_transcript "OTTHUMT00000251820.2" ; hgnc_id "HGNC:8717" ; level 2 ; orig_coord_info "chr5,141485174,141487615,+" ; protein_id "ENSP00000306918.1" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGA6--PCDHGC4^ENST00000306593.1" ; transcript_name "PCDHGC4-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA6--PCDHGC4 HAVANA mRNA 9828 17624 . + . FI_gene_label "PCDHGC4^ENSG00000242419.5" ; ID "PCDHGA6--PCDHGC4^ENST00000306593.1" ; Parent "PCDHGA6--PCDHGC4^PCDHGC4^ENSG00000242419.5" ; ccdsid "CCDS4262.1" ; exon_id "ENSE00001162305.2" ; exon_number 1 ; gene_id "PCDHGA6--PCDHGC4^PCDHGC4^ENSG00000242419.5" ; gene_name PCDHGC4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129625.4" ; havana_transcript "OTTHUMT00000251820.2" ; hgnc_id "HGNC:8717" ; level 2 ; orig_coord_info "chr5,141485174,141487615,+" ; protein_id "ENSP00000306918.1" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGA6--PCDHGC4^ENST00000306593.1" ; transcript_name "PCDHGC4-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA6--PCDHGC4 HAVANA gene 1001 6650 . + . FI_gene_label "PCDHGA6^ENSG00000253731.3" ; ID "PCDHGA6--PCDHGC4^PCDHGA6^ENSG00000253731.3" ; ccdsid "CCDS75335.1" ; exon_id "ENSE00003746318.1" ; exon_number 1 ; gene_id "PCDHGA6--PCDHGC4^PCDHGA6^ENSG00000253731.3" ; gene_name PCDHGA6 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163684.2" ; havana_transcript "OTTHUMT00000476688.1" ; hgnc_id "HGNC:8704" ; level 2 ; orig_coord_info "chr5,141374084,141376537,+" ; protein_id "ENSP00000479478.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA6--PCDHGC4^ENST00000610583.1" ; transcript_name "PCDHGA6-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA6--PCDHGC4 HAVANA mRNA 1001 6650 . + . FI_gene_label "PCDHGA6^ENSG00000253731.3" ; ID "PCDHGA6--PCDHGC4^ENST00000610583.1" ; Parent "PCDHGA6--PCDHGC4^PCDHGA6^ENSG00000253731.3" ; ccdsid "CCDS75335.1" ; exon_id "ENSE00003746318.1" ; exon_number 1 ; gene_id "PCDHGA6--PCDHGC4^PCDHGA6^ENSG00000253731.3" ; gene_name PCDHGA6 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163684.2" ; havana_transcript "OTTHUMT00000476688.1" ; hgnc_id "HGNC:8704" ; level 2 ; orig_coord_info "chr5,141374084,141376537,+" ; protein_id "ENSP00000479478.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA6--PCDHGC4^ENST00000610583.1" ; transcript_name "PCDHGA6-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGA6--PCDHGC5 HAVANA gene 9651 17676 . + . FI_gene_label "PCDHGC5^ENSG00000240764.4" ; ID "PCDHGA6--PCDHGC5^PCDHGC5^ENSG00000240764.4" ; ccdsid "CCDS4263.1" ; exon_id "ENSE00000766474.3" ; exon_number 1 ; gene_id "PCDHGA6--PCDHGC5^PCDHGC5^ENSG00000240764.4" ; gene_name PCDHGC5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129624.2" ; havana_transcript "OTTHUMT00000251819.2" ; hgnc_id "HGNC:8718" ; level 2 ; orig_coord_info "chr5,141489241,141491700,+" ; protein_id "ENSP00000252087.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA6--PCDHGC5^ENST00000252087.3" ; transcript_name "PCDHGC5-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGA6--PCDHGC5 HAVANA mRNA 9651 17676 . + . FI_gene_label "PCDHGC5^ENSG00000240764.4" ; ID "PCDHGA6--PCDHGC5^ENST00000252087.3" ; Parent "PCDHGA6--PCDHGC5^PCDHGC5^ENSG00000240764.4" ; ccdsid "CCDS4263.1" ; exon_id "ENSE00000766474.3" ; exon_number 1 ; gene_id "PCDHGA6--PCDHGC5^PCDHGC5^ENSG00000240764.4" ; gene_name PCDHGC5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129624.2" ; havana_transcript "OTTHUMT00000251819.2" ; hgnc_id "HGNC:8718" ; level 2 ; orig_coord_info "chr5,141489241,141491700,+" ; protein_id "ENSP00000252087.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGA6--PCDHGC5^ENST00000252087.3" ; transcript_name "PCDHGC5-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGA6--PCDHGC5 HAVANA gene 1001 6650 . + . FI_gene_label "PCDHGA6^ENSG00000253731.3" ; ID "PCDHGA6--PCDHGC5^PCDHGA6^ENSG00000253731.3" ; ccdsid "CCDS75335.1" ; exon_id "ENSE00003746318.1" ; exon_number 1 ; gene_id "PCDHGA6--PCDHGC5^PCDHGA6^ENSG00000253731.3" ; gene_name PCDHGA6 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163684.2" ; havana_transcript "OTTHUMT00000476688.1" ; hgnc_id "HGNC:8704" ; level 2 ; orig_coord_info "chr5,141374084,141376537,+" ; protein_id "ENSP00000479478.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA6--PCDHGC5^ENST00000610583.1" ; transcript_name "PCDHGA6-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGA6--PCDHGC5 HAVANA mRNA 1001 6650 . + . FI_gene_label "PCDHGA6^ENSG00000253731.3" ; ID "PCDHGA6--PCDHGC5^ENST00000610583.1" ; Parent "PCDHGA6--PCDHGC5^PCDHGA6^ENSG00000253731.3" ; ccdsid "CCDS75335.1" ; exon_id "ENSE00003746318.1" ; exon_number 1 ; gene_id "PCDHGA6--PCDHGC5^PCDHGA6^ENSG00000253731.3" ; gene_name PCDHGA6 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163684.2" ; havana_transcript "OTTHUMT00000476688.1" ; hgnc_id "HGNC:8704" ; level 2 ; orig_coord_info "chr5,141374084,141376537,+" ; protein_id "ENSP00000479478.1" ; tag RNA_Seq_supported_partial basic CCDS ; transcript_id "PCDHGA6--PCDHGC5^ENST00000610583.1" ; transcript_name "PCDHGA6-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGB2--PCDHGA10 HAVANA gene 6778 16231 . + . FI_gene_label "PCDHGA10^ENSG00000253846.2" ; ID "PCDHGB2--PCDHGA10^PCDHGA10^ENSG00000253846.2" ; ccdsid "CCDS47292.1" ; exon_id "ENSE00001792208.1" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGA10^PCDHGA10^ENSG00000253846.2" ; gene_name PCDHGA10 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163688.2" ; havana_transcript "OTTHUMT00000374747.1" ; hgnc_id "HGNC:8697" ; level 2 ; orig_coord_info "chr5,141413176,141415611,+" ; protein_id "ENSP00000381611.2" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGB2--PCDHGA10^ENST00000398610.2" ; transcript_name "PCDHGA10-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGB2--PCDHGA10 HAVANA mRNA 6778 16231 . + . FI_gene_label "PCDHGA10^ENSG00000253846.2" ; ID "PCDHGB2--PCDHGA10^ENST00000398610.2" ; Parent "PCDHGB2--PCDHGA10^PCDHGA10^ENSG00000253846.2" ; ccdsid "CCDS47292.1" ; exon_id "ENSE00001792208.1" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGA10^PCDHGA10^ENSG00000253846.2" ; gene_name PCDHGA10 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163688.2" ; havana_transcript "OTTHUMT00000374747.1" ; hgnc_id "HGNC:8697" ; level 2 ; orig_coord_info "chr5,141413176,141415611,+" ; protein_id "ENSP00000381611.2" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGB2--PCDHGA10^ENST00000398610.2" ; transcript_name "PCDHGA10-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGB2--PCDHGA10 HAVANA gene 1001 3588 . + . FI_gene_label "PCDHGB2^ENSG00000253910.2" ; ID "PCDHGB2--PCDHGA10^PCDHGB2^ENSG00000253910.2" ; ccdsid "CCDS75332.1" ; exon_id "ENSE00003749890.1" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGA10^PCDHGB2^ENSG00000253910.2" ; gene_name PCDHGB2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163682.2" ; havana_transcript "OTTHUMT00000476685.1" ; hgnc_id "HGNC:8709" ; level 2 ; orig_coord_info "chr5,141360136,141362568,+" ; protein_id "ENSP00000481512.1" ; tag basic CCDS ; transcript_id "PCDHGB2--PCDHGA10^ENST00000622527.1" ; transcript_name "PCDHGB2-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGB2--PCDHGA10 HAVANA mRNA 1001 3588 . + . FI_gene_label "PCDHGB2^ENSG00000253910.2" ; ID "PCDHGB2--PCDHGA10^ENST00000622527.1" ; Parent "PCDHGB2--PCDHGA10^PCDHGB2^ENSG00000253910.2" ; ccdsid "CCDS75332.1" ; exon_id "ENSE00003749890.1" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGA10^PCDHGB2^ENSG00000253910.2" ; gene_name PCDHGB2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163682.2" ; havana_transcript "OTTHUMT00000476685.1" ; hgnc_id "HGNC:8709" ; level 2 ; orig_coord_info "chr5,141360136,141362568,+" ; protein_id "ENSP00000481512.1" ; tag basic CCDS ; transcript_id "PCDHGB2--PCDHGA10^ENST00000622527.1" ; transcript_name "PCDHGB2-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGB2--PCDHGA11 HAVANA gene 6593 15398 . + . FI_gene_label "PCDHGA11^ENSG00000253873.6" ; ID "PCDHGB2--PCDHGA11^PCDHGA11^ENSG00000253873.6" ; ccdsid "CCDS47294.1" ; exon_id "ENSE00001533810.3" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGA11^PCDHGA11^ENSG00000253873.6" ; gene_name PCDHGA11 ; gene_type protein_coding ; havana_gene "OTTHUMG00000164055.3" ; havana_transcript "OTTHUMT00000376974.3" ; hgnc_id "HGNC:8698" ; level 2 ; orig_coord_info "chr5,141421228,141423660,+" ; protein_id "ENSP00000381589.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGB2--PCDHGA11^ENST00000398587.7" ; transcript_name "PCDHGA11-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGB2--PCDHGA11 HAVANA mRNA 6593 15398 . + . FI_gene_label "PCDHGA11^ENSG00000253873.6" ; ID "PCDHGB2--PCDHGA11^ENST00000398587.7" ; Parent "PCDHGB2--PCDHGA11^PCDHGA11^ENSG00000253873.6" ; ccdsid "CCDS47294.1" ; exon_id "ENSE00001533810.3" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGA11^PCDHGA11^ENSG00000253873.6" ; gene_name PCDHGA11 ; gene_type protein_coding ; havana_gene "OTTHUMG00000164055.3" ; havana_transcript "OTTHUMT00000376974.3" ; hgnc_id "HGNC:8698" ; level 2 ; orig_coord_info "chr5,141421228,141423660,+" ; protein_id "ENSP00000381589.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGB2--PCDHGA11^ENST00000398587.7" ; transcript_name "PCDHGA11-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGB2--PCDHGA11 HAVANA gene 1001 3588 . + . FI_gene_label "PCDHGB2^ENSG00000253910.2" ; ID "PCDHGB2--PCDHGA11^PCDHGB2^ENSG00000253910.2" ; ccdsid "CCDS75332.1" ; exon_id "ENSE00003749890.1" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGA11^PCDHGB2^ENSG00000253910.2" ; gene_name PCDHGB2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163682.2" ; havana_transcript "OTTHUMT00000476685.1" ; hgnc_id "HGNC:8709" ; level 2 ; orig_coord_info "chr5,141360136,141362568,+" ; protein_id "ENSP00000481512.1" ; tag basic CCDS ; transcript_id "PCDHGB2--PCDHGA11^ENST00000622527.1" ; transcript_name "PCDHGB2-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGB2--PCDHGA11 HAVANA mRNA 1001 3588 . + . FI_gene_label "PCDHGB2^ENSG00000253910.2" ; ID "PCDHGB2--PCDHGA11^ENST00000622527.1" ; Parent "PCDHGB2--PCDHGA11^PCDHGB2^ENSG00000253910.2" ; ccdsid "CCDS75332.1" ; exon_id "ENSE00003749890.1" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGA11^PCDHGB2^ENSG00000253910.2" ; gene_name PCDHGB2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163682.2" ; havana_transcript "OTTHUMT00000476685.1" ; hgnc_id "HGNC:8709" ; level 2 ; orig_coord_info "chr5,141360136,141362568,+" ; protein_id "ENSP00000481512.1" ; tag basic CCDS ; transcript_id "PCDHGB2--PCDHGA11^ENST00000622527.1" ; transcript_name "PCDHGB2-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGB2--PCDHGA12 HAVANA gene 6589 14481 . + . FI_gene_label "PCDHGA12^ENSG00000253159.3" ; ID "PCDHGB2--PCDHGA12^PCDHGA12^ENSG00000253159.3" ; ccdsid "CCDS4260.1" ; exon_id "ENSE00000814269.5" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGA12^PCDHGA12^ENSG00000253159.3" ; gene_name PCDHGA12 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129611.6" ; havana_transcript "OTTHUMT00000251806.3" ; hgnc_id "HGNC:8699" ; level 2 ; orig_coord_info "chr5,141430760,141433183,+" ; protein_id "ENSP00000252085.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGB2--PCDHGA12^ENST00000252085.4" ; transcript_name "PCDHGA12-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGB2--PCDHGA12 HAVANA mRNA 6589 14481 . + . FI_gene_label "PCDHGA12^ENSG00000253159.3" ; ID "PCDHGB2--PCDHGA12^ENST00000252085.4" ; Parent "PCDHGB2--PCDHGA12^PCDHGA12^ENSG00000253159.3" ; ccdsid "CCDS4260.1" ; exon_id "ENSE00000814269.5" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGA12^PCDHGA12^ENSG00000253159.3" ; gene_name PCDHGA12 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129611.6" ; havana_transcript "OTTHUMT00000251806.3" ; hgnc_id "HGNC:8699" ; level 2 ; orig_coord_info "chr5,141430760,141433183,+" ; protein_id "ENSP00000252085.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGB2--PCDHGA12^ENST00000252085.4" ; transcript_name "PCDHGA12-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGB2--PCDHGA12 HAVANA gene 1001 3588 . + . FI_gene_label "PCDHGB2^ENSG00000253910.2" ; ID "PCDHGB2--PCDHGA12^PCDHGB2^ENSG00000253910.2" ; ccdsid "CCDS75332.1" ; exon_id "ENSE00003749890.1" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGA12^PCDHGB2^ENSG00000253910.2" ; gene_name PCDHGB2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163682.2" ; havana_transcript "OTTHUMT00000476685.1" ; hgnc_id "HGNC:8709" ; level 2 ; orig_coord_info "chr5,141360136,141362568,+" ; protein_id "ENSP00000481512.1" ; tag basic CCDS ; transcript_id "PCDHGB2--PCDHGA12^ENST00000622527.1" ; transcript_name "PCDHGB2-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGB2--PCDHGA12 HAVANA mRNA 1001 3588 . + . FI_gene_label "PCDHGB2^ENSG00000253910.2" ; ID "PCDHGB2--PCDHGA12^ENST00000622527.1" ; Parent "PCDHGB2--PCDHGA12^PCDHGB2^ENSG00000253910.2" ; ccdsid "CCDS75332.1" ; exon_id "ENSE00003749890.1" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGA12^PCDHGB2^ENSG00000253910.2" ; gene_name PCDHGB2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163682.2" ; havana_transcript "OTTHUMT00000476685.1" ; hgnc_id "HGNC:8709" ; level 2 ; orig_coord_info "chr5,141360136,141362568,+" ; protein_id "ENSP00000481512.1" ; tag basic CCDS ; transcript_id "PCDHGB2--PCDHGA12^ENST00000622527.1" ; transcript_name "PCDHGB2-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGB2--PCDHGA8 HAVANA gene 9065 18245 . + . FI_gene_label "PCDHGA8^ENSG00000253767.3" ; ID "PCDHGB2--PCDHGA8^PCDHGA8^ENSG00000253767.3" ; ccdsid "CCDS47291.1" ; exon_id "ENSE00001533882.3" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGA8^PCDHGA8^ENSG00000253767.3" ; gene_name PCDHGA8 ; gene_type protein_coding ; havana_gene "OTTHUMG00000164053.2" ; havana_transcript "OTTHUMT00000376972.1" ; hgnc_id "HGNC:8706" ; level 2 ; orig_coord_info "chr5,141392814,141395237,+" ; protein_id "ENSP00000381605.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGB2--PCDHGA8^ENST00000398604.3" ; transcript_name "PCDHGA8-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGB2--PCDHGA8 HAVANA mRNA 9065 18245 . + . FI_gene_label "PCDHGA8^ENSG00000253767.3" ; ID "PCDHGB2--PCDHGA8^ENST00000398604.3" ; Parent "PCDHGB2--PCDHGA8^PCDHGA8^ENSG00000253767.3" ; ccdsid "CCDS47291.1" ; exon_id "ENSE00001533882.3" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGA8^PCDHGA8^ENSG00000253767.3" ; gene_name PCDHGA8 ; gene_type protein_coding ; havana_gene "OTTHUMG00000164053.2" ; havana_transcript "OTTHUMT00000376972.1" ; hgnc_id "HGNC:8706" ; level 2 ; orig_coord_info "chr5,141392814,141395237,+" ; protein_id "ENSP00000381605.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGB2--PCDHGA8^ENST00000398604.3" ; transcript_name "PCDHGA8-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGB2--PCDHGA8 HAVANA gene 1001 3588 . + . FI_gene_label "PCDHGB2^ENSG00000253910.2" ; ID "PCDHGB2--PCDHGA8^PCDHGB2^ENSG00000253910.2" ; ccdsid "CCDS75332.1" ; exon_id "ENSE00003749890.1" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGA8^PCDHGB2^ENSG00000253910.2" ; gene_name PCDHGB2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163682.2" ; havana_transcript "OTTHUMT00000476685.1" ; hgnc_id "HGNC:8709" ; level 2 ; orig_coord_info "chr5,141360136,141362568,+" ; protein_id "ENSP00000481512.1" ; tag basic CCDS ; transcript_id "PCDHGB2--PCDHGA8^ENST00000622527.1" ; transcript_name "PCDHGB2-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGB2--PCDHGA8 HAVANA mRNA 1001 3588 . + . FI_gene_label "PCDHGB2^ENSG00000253910.2" ; ID "PCDHGB2--PCDHGA8^ENST00000622527.1" ; Parent "PCDHGB2--PCDHGA8^PCDHGB2^ENSG00000253910.2" ; ccdsid "CCDS75332.1" ; exon_id "ENSE00003749890.1" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGA8^PCDHGB2^ENSG00000253910.2" ; gene_name PCDHGB2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163682.2" ; havana_transcript "OTTHUMT00000476685.1" ; hgnc_id "HGNC:8709" ; level 2 ; orig_coord_info "chr5,141360136,141362568,+" ; protein_id "ENSP00000481512.1" ; tag basic CCDS ; transcript_id "PCDHGB2--PCDHGA8^ENST00000622527.1" ; transcript_name "PCDHGB2-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGB2--PCDHGA9 HAVANA gene 6610 14337 . + . FI_gene_label "PCDHGA9^ENSG00000261934.2" ; ID "PCDHGB2--PCDHGA9^PCDHGA9^ENSG00000261934.2" ; ccdsid "CCDS58981.1" ; exon_id "ENSE00002639131.1" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGA9^PCDHGA9^ENSG00000261934.2" ; gene_name PCDHGA9 ; gene_type protein_coding ; havana_gene "OTTHUMG00000177473.2" ; havana_transcript "OTTHUMT00000437105.1" ; hgnc_id "HGNC:8707" ; level 2 ; orig_coord_info "chr5,141402953,141405376,+" ; protein_id "ENSP00000460274.1" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGB2--PCDHGA9^ENST00000573521.1" ; transcript_name "PCDHGA9-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGB2--PCDHGA9 HAVANA mRNA 6610 14337 . + . FI_gene_label "PCDHGA9^ENSG00000261934.2" ; ID "PCDHGB2--PCDHGA9^ENST00000573521.1" ; Parent "PCDHGB2--PCDHGA9^PCDHGA9^ENSG00000261934.2" ; ccdsid "CCDS58981.1" ; exon_id "ENSE00002639131.1" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGA9^PCDHGA9^ENSG00000261934.2" ; gene_name PCDHGA9 ; gene_type protein_coding ; havana_gene "OTTHUMG00000177473.2" ; havana_transcript "OTTHUMT00000437105.1" ; hgnc_id "HGNC:8707" ; level 2 ; orig_coord_info "chr5,141402953,141405376,+" ; protein_id "ENSP00000460274.1" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGB2--PCDHGA9^ENST00000573521.1" ; transcript_name "PCDHGA9-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGB2--PCDHGA9 HAVANA gene 1001 3588 . + . FI_gene_label "PCDHGB2^ENSG00000253910.2" ; ID "PCDHGB2--PCDHGA9^PCDHGB2^ENSG00000253910.2" ; ccdsid "CCDS75332.1" ; exon_id "ENSE00003749890.1" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGA9^PCDHGB2^ENSG00000253910.2" ; gene_name PCDHGB2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163682.2" ; havana_transcript "OTTHUMT00000476685.1" ; hgnc_id "HGNC:8709" ; level 2 ; orig_coord_info "chr5,141360136,141362568,+" ; protein_id "ENSP00000481512.1" ; tag basic CCDS ; transcript_id "PCDHGB2--PCDHGA9^ENST00000622527.1" ; transcript_name "PCDHGB2-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGB2--PCDHGA9 HAVANA mRNA 1001 3588 . + . FI_gene_label "PCDHGB2^ENSG00000253910.2" ; ID "PCDHGB2--PCDHGA9^ENST00000622527.1" ; Parent "PCDHGB2--PCDHGA9^PCDHGB2^ENSG00000253910.2" ; ccdsid "CCDS75332.1" ; exon_id "ENSE00003749890.1" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGA9^PCDHGB2^ENSG00000253910.2" ; gene_name PCDHGB2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163682.2" ; havana_transcript "OTTHUMT00000476685.1" ; hgnc_id "HGNC:8709" ; level 2 ; orig_coord_info "chr5,141360136,141362568,+" ; protein_id "ENSP00000481512.1" ; tag basic CCDS ; transcript_id "PCDHGB2--PCDHGA9^ENST00000622527.1" ; transcript_name "PCDHGB2-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGB2--PCDHGB6 HAVANA gene 6771 16370 . + . FI_gene_label "PCDHGB6^ENSG00000253305.2" ; ID "PCDHGB2--PCDHGB6^PCDHGB6^ENSG00000253305.2" ; ccdsid "CCDS54929.1" ; exon_id "ENSE00002122685.1" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGB6^PCDHGB6^ENSG00000253305.2" ; gene_name PCDHGB6 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163687.2" ; havana_transcript "OTTHUMT00000374746.1" ; hgnc_id "HGNC:8713" ; level 2 ; orig_coord_info "chr5,141408203,141410620,+" ; protein_id "ENSP00000428603.1" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGB2--PCDHGB6^ENST00000520790.1" ; transcript_name "PCDHGB6-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGB2--PCDHGB6 HAVANA mRNA 6771 16370 . + . FI_gene_label "PCDHGB6^ENSG00000253305.2" ; ID "PCDHGB2--PCDHGB6^ENST00000520790.1" ; Parent "PCDHGB2--PCDHGB6^PCDHGB6^ENSG00000253305.2" ; ccdsid "CCDS54929.1" ; exon_id "ENSE00002122685.1" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGB6^PCDHGB6^ENSG00000253305.2" ; gene_name PCDHGB6 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163687.2" ; havana_transcript "OTTHUMT00000374746.1" ; hgnc_id "HGNC:8713" ; level 2 ; orig_coord_info "chr5,141408203,141410620,+" ; protein_id "ENSP00000428603.1" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGB2--PCDHGB6^ENST00000520790.1" ; transcript_name "PCDHGB6-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGB2--PCDHGB6 HAVANA gene 1001 3588 . + . FI_gene_label "PCDHGB2^ENSG00000253910.2" ; ID "PCDHGB2--PCDHGB6^PCDHGB2^ENSG00000253910.2" ; ccdsid "CCDS75332.1" ; exon_id "ENSE00003749890.1" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGB6^PCDHGB2^ENSG00000253910.2" ; gene_name PCDHGB2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163682.2" ; havana_transcript "OTTHUMT00000476685.1" ; hgnc_id "HGNC:8709" ; level 2 ; orig_coord_info "chr5,141360136,141362568,+" ; protein_id "ENSP00000481512.1" ; tag basic CCDS ; transcript_id "PCDHGB2--PCDHGB6^ENST00000622527.1" ; transcript_name "PCDHGB2-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGB2--PCDHGB6 HAVANA mRNA 1001 3588 . + . FI_gene_label "PCDHGB2^ENSG00000253910.2" ; ID "PCDHGB2--PCDHGB6^ENST00000622527.1" ; Parent "PCDHGB2--PCDHGB6^PCDHGB2^ENSG00000253910.2" ; ccdsid "CCDS75332.1" ; exon_id "ENSE00003749890.1" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGB6^PCDHGB2^ENSG00000253910.2" ; gene_name PCDHGB2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163682.2" ; havana_transcript "OTTHUMT00000476685.1" ; hgnc_id "HGNC:8709" ; level 2 ; orig_coord_info "chr5,141360136,141362568,+" ; protein_id "ENSP00000481512.1" ; tag basic CCDS ; transcript_id "PCDHGB2--PCDHGB6^ENST00000622527.1" ; transcript_name "PCDHGB2-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGB2--PCDHGB7 HAVANA gene 6621 14550 . + . FI_gene_label "PCDHGB7^ENSG00000254122.3" ; ID "PCDHGB2--PCDHGB7^PCDHGB7^ENSG00000254122.3" ; ccdsid "CCDS47293.1" ; exon_id "ENSE00001533845.4" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGB7^PCDHGB7^ENSG00000254122.3" ; gene_name PCDHGB7 ; gene_type protein_coding ; havana_gene "OTTHUMG00000164054.2" ; havana_transcript "OTTHUMT00000376973.2" ; hgnc_id "HGNC:8714" ; level 2 ; orig_coord_info "chr5,141417860,141420274,+" ; protein_id "ENSP00000381594.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGB2--PCDHGB7^ENST00000398594.4" ; transcript_name "PCDHGB7-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGB2--PCDHGB7 HAVANA mRNA 6621 14550 . + . FI_gene_label "PCDHGB7^ENSG00000254122.3" ; ID "PCDHGB2--PCDHGB7^ENST00000398594.4" ; Parent "PCDHGB2--PCDHGB7^PCDHGB7^ENSG00000254122.3" ; ccdsid "CCDS47293.1" ; exon_id "ENSE00001533845.4" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGB7^PCDHGB7^ENSG00000254122.3" ; gene_name PCDHGB7 ; gene_type protein_coding ; havana_gene "OTTHUMG00000164054.2" ; havana_transcript "OTTHUMT00000376973.2" ; hgnc_id "HGNC:8714" ; level 2 ; orig_coord_info "chr5,141417860,141420274,+" ; protein_id "ENSP00000381594.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGB2--PCDHGB7^ENST00000398594.4" ; transcript_name "PCDHGB7-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGB2--PCDHGB7 HAVANA gene 1001 3588 . + . FI_gene_label "PCDHGB2^ENSG00000253910.2" ; ID "PCDHGB2--PCDHGB7^PCDHGB2^ENSG00000253910.2" ; ccdsid "CCDS75332.1" ; exon_id "ENSE00003749890.1" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGB7^PCDHGB2^ENSG00000253910.2" ; gene_name PCDHGB2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163682.2" ; havana_transcript "OTTHUMT00000476685.1" ; hgnc_id "HGNC:8709" ; level 2 ; orig_coord_info "chr5,141360136,141362568,+" ; protein_id "ENSP00000481512.1" ; tag basic CCDS ; transcript_id "PCDHGB2--PCDHGB7^ENST00000622527.1" ; transcript_name "PCDHGB2-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGB2--PCDHGB7 HAVANA mRNA 1001 3588 . + . FI_gene_label "PCDHGB2^ENSG00000253910.2" ; ID "PCDHGB2--PCDHGB7^ENST00000622527.1" ; Parent "PCDHGB2--PCDHGB7^PCDHGB2^ENSG00000253910.2" ; ccdsid "CCDS75332.1" ; exon_id "ENSE00003749890.1" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGB7^PCDHGB2^ENSG00000253910.2" ; gene_name PCDHGB2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163682.2" ; havana_transcript "OTTHUMT00000476685.1" ; hgnc_id "HGNC:8709" ; level 2 ; orig_coord_info "chr5,141360136,141362568,+" ; protein_id "ENSP00000481512.1" ; tag basic CCDS ; transcript_id "PCDHGB2--PCDHGB7^ENST00000622527.1" ; transcript_name "PCDHGB2-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGB2--PCDHGC3 HAVANA gene 6608 16794 . + . FI_gene_label "PCDHGC3^ENSG00000240184.7" ; ID "PCDHGB2--PCDHGC3^PCDHGC3^ENSG00000240184.7" ; ccdsid "CCDS4261.1" ; exon_id "ENSE00001199459.7" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGC3^PCDHGC3^ENSG00000240184.7" ; gene_name PCDHGC3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129613.8" ; havana_transcript "OTTHUMT00000251808.5" ; hgnc_id "HGNC:8716" ; level 2 ; orig_coord_info "chr5,141476117,141478546,+" ; protein_id "ENSP00000312070.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGB2--PCDHGC3^ENST00000308177.5" ; transcript_name "PCDHGC3-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGB2--PCDHGC3 HAVANA mRNA 6608 16794 . + . FI_gene_label "PCDHGC3^ENSG00000240184.7" ; ID "PCDHGB2--PCDHGC3^ENST00000308177.5" ; Parent "PCDHGB2--PCDHGC3^PCDHGC3^ENSG00000240184.7" ; ccdsid "CCDS4261.1" ; exon_id "ENSE00001199459.7" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGC3^PCDHGC3^ENSG00000240184.7" ; gene_name PCDHGC3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129613.8" ; havana_transcript "OTTHUMT00000251808.5" ; hgnc_id "HGNC:8716" ; level 2 ; orig_coord_info "chr5,141476117,141478546,+" ; protein_id "ENSP00000312070.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGB2--PCDHGC3^ENST00000308177.5" ; transcript_name "PCDHGC3-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGB2--PCDHGC3 HAVANA gene 1001 3588 . + . FI_gene_label "PCDHGB2^ENSG00000253910.2" ; ID "PCDHGB2--PCDHGC3^PCDHGB2^ENSG00000253910.2" ; ccdsid "CCDS75332.1" ; exon_id "ENSE00003749890.1" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGC3^PCDHGB2^ENSG00000253910.2" ; gene_name PCDHGB2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163682.2" ; havana_transcript "OTTHUMT00000476685.1" ; hgnc_id "HGNC:8709" ; level 2 ; orig_coord_info "chr5,141360136,141362568,+" ; protein_id "ENSP00000481512.1" ; tag basic CCDS ; transcript_id "PCDHGB2--PCDHGC3^ENST00000622527.1" ; transcript_name "PCDHGB2-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGB2--PCDHGC3 HAVANA mRNA 1001 3588 . + . FI_gene_label "PCDHGB2^ENSG00000253910.2" ; ID "PCDHGB2--PCDHGC3^ENST00000622527.1" ; Parent "PCDHGB2--PCDHGC3^PCDHGB2^ENSG00000253910.2" ; ccdsid "CCDS75332.1" ; exon_id "ENSE00003749890.1" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGC3^PCDHGB2^ENSG00000253910.2" ; gene_name PCDHGB2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163682.2" ; havana_transcript "OTTHUMT00000476685.1" ; hgnc_id "HGNC:8709" ; level 2 ; orig_coord_info "chr5,141360136,141362568,+" ; protein_id "ENSP00000481512.1" ; tag basic CCDS ; transcript_id "PCDHGB2--PCDHGC3^ENST00000622527.1" ; transcript_name "PCDHGB2-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGB2--PCDHGC4 HAVANA gene 6766 14562 . + . FI_gene_label "PCDHGC4^ENSG00000242419.5" ; ID "PCDHGB2--PCDHGC4^PCDHGC4^ENSG00000242419.5" ; ccdsid "CCDS4262.1" ; exon_id "ENSE00001162305.2" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGC4^PCDHGC4^ENSG00000242419.5" ; gene_name PCDHGC4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129625.4" ; havana_transcript "OTTHUMT00000251820.2" ; hgnc_id "HGNC:8717" ; level 2 ; orig_coord_info "chr5,141485174,141487615,+" ; protein_id "ENSP00000306918.1" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGB2--PCDHGC4^ENST00000306593.1" ; transcript_name "PCDHGC4-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGB2--PCDHGC4 HAVANA mRNA 6766 14562 . + . FI_gene_label "PCDHGC4^ENSG00000242419.5" ; ID "PCDHGB2--PCDHGC4^ENST00000306593.1" ; Parent "PCDHGB2--PCDHGC4^PCDHGC4^ENSG00000242419.5" ; ccdsid "CCDS4262.1" ; exon_id "ENSE00001162305.2" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGC4^PCDHGC4^ENSG00000242419.5" ; gene_name PCDHGC4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129625.4" ; havana_transcript "OTTHUMT00000251820.2" ; hgnc_id "HGNC:8717" ; level 2 ; orig_coord_info "chr5,141485174,141487615,+" ; protein_id "ENSP00000306918.1" ; tag basic appris_principal_1 CCDS ; transcript_id "PCDHGB2--PCDHGC4^ENST00000306593.1" ; transcript_name "PCDHGC4-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGB2--PCDHGC4 HAVANA gene 1001 3588 . + . FI_gene_label "PCDHGB2^ENSG00000253910.2" ; ID "PCDHGB2--PCDHGC4^PCDHGB2^ENSG00000253910.2" ; ccdsid "CCDS75332.1" ; exon_id "ENSE00003749890.1" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGC4^PCDHGB2^ENSG00000253910.2" ; gene_name PCDHGB2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163682.2" ; havana_transcript "OTTHUMT00000476685.1" ; hgnc_id "HGNC:8709" ; level 2 ; orig_coord_info "chr5,141360136,141362568,+" ; protein_id "ENSP00000481512.1" ; tag basic CCDS ; transcript_id "PCDHGB2--PCDHGC4^ENST00000622527.1" ; transcript_name "PCDHGB2-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGB2--PCDHGC4 HAVANA mRNA 1001 3588 . + . FI_gene_label "PCDHGB2^ENSG00000253910.2" ; ID "PCDHGB2--PCDHGC4^ENST00000622527.1" ; Parent "PCDHGB2--PCDHGC4^PCDHGB2^ENSG00000253910.2" ; ccdsid "CCDS75332.1" ; exon_id "ENSE00003749890.1" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGC4^PCDHGB2^ENSG00000253910.2" ; gene_name PCDHGB2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163682.2" ; havana_transcript "OTTHUMT00000476685.1" ; hgnc_id "HGNC:8709" ; level 2 ; orig_coord_info "chr5,141360136,141362568,+" ; protein_id "ENSP00000481512.1" ; tag basic CCDS ; transcript_id "PCDHGB2--PCDHGC4^ENST00000622527.1" ; transcript_name "PCDHGB2-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCDHGB2--PCDHGC5 HAVANA gene 6589 14614 . + . FI_gene_label "PCDHGC5^ENSG00000240764.4" ; ID "PCDHGB2--PCDHGC5^PCDHGC5^ENSG00000240764.4" ; ccdsid "CCDS4263.1" ; exon_id "ENSE00000766474.3" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGC5^PCDHGC5^ENSG00000240764.4" ; gene_name PCDHGC5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129624.2" ; havana_transcript "OTTHUMT00000251819.2" ; hgnc_id "HGNC:8718" ; level 2 ; orig_coord_info "chr5,141489241,141491700,+" ; protein_id "ENSP00000252087.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGB2--PCDHGC5^ENST00000252087.3" ; transcript_name "PCDHGC5-201" ; transcript_support_level 1 ; transcript_type protein_coding
PCDHGB2--PCDHGC5 HAVANA mRNA 6589 14614 . + . FI_gene_label "PCDHGC5^ENSG00000240764.4" ; ID "PCDHGB2--PCDHGC5^ENST00000252087.3" ; Parent "PCDHGB2--PCDHGC5^PCDHGC5^ENSG00000240764.4" ; ccdsid "CCDS4263.1" ; exon_id "ENSE00000766474.3" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGC5^PCDHGC5^ENSG00000240764.4" ; gene_name PCDHGC5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000129624.2" ; havana_transcript "OTTHUMT00000251819.2" ; hgnc_id "HGNC:8718" ; level 2 ; orig_coord_info "chr5,141489241,141491700,+" ; protein_id "ENSP00000252087.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCDHGB2--PCDHGC5^ENST00000252087.3" ; transcript_name "PCDHGC5-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PCDHGB2--PCDHGC5 HAVANA gene 1001 3588 . + . FI_gene_label "PCDHGB2^ENSG00000253910.2" ; ID "PCDHGB2--PCDHGC5^PCDHGB2^ENSG00000253910.2" ; ccdsid "CCDS75332.1" ; exon_id "ENSE00003749890.1" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGC5^PCDHGB2^ENSG00000253910.2" ; gene_name PCDHGB2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163682.2" ; havana_transcript "OTTHUMT00000476685.1" ; hgnc_id "HGNC:8709" ; level 2 ; orig_coord_info "chr5,141360136,141362568,+" ; protein_id "ENSP00000481512.1" ; tag basic CCDS ; transcript_id "PCDHGB2--PCDHGC5^ENST00000622527.1" ; transcript_name "PCDHGB2-202" ; transcript_support_level NA ; transcript_type protein_coding
PCDHGB2--PCDHGC5 HAVANA mRNA 1001 3588 . + . FI_gene_label "PCDHGB2^ENSG00000253910.2" ; ID "PCDHGB2--PCDHGC5^ENST00000622527.1" ; Parent "PCDHGB2--PCDHGC5^PCDHGB2^ENSG00000253910.2" ; ccdsid "CCDS75332.1" ; exon_id "ENSE00003749890.1" ; exon_number 1 ; gene_id "PCDHGB2--PCDHGC5^PCDHGB2^ENSG00000253910.2" ; gene_name PCDHGB2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163682.2" ; havana_transcript "OTTHUMT00000476685.1" ; hgnc_id "HGNC:8709" ; level 2 ; orig_coord_info "chr5,141360136,141362568,+" ; protein_id "ENSP00000481512.1" ; tag basic CCDS ; transcript_id "PCDHGB2--PCDHGC5^ENST00000622527.1" ; transcript_name "PCDHGB2-202" ; transcript_support_level NA ; transcript_type protein_coding
L1 and L2 created:
PCLO--GLI3 HAVANA gene 1047 49317 . + . FI_gene_label "PCLO^ENSG00000186472.20" ; ID "PCLO--GLI3^PCLO^ENSG00000186472.20" ; ccdsid "CCDS47630.1" ; exon_id "ENSE00003847485.1" ; exon_number 1 ; gene_id "PCLO--GLI3^PCLO^ENSG00000186472.20" ; gene_name PCLO ; gene_type protein_coding ; havana_gene "OTTHUMG00000154853.15" ; havana_transcript "OTTHUMT00000337368.6" ; hgnc_id "HGNC:13406" ; level 2 ; orig_coord_info "chr7,83162345,83162592,-" ; protein_id "ENSP00000334319.8" ; tag not_organism_supported basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCLO--GLI3^ENST00000333891.14" ; transcript_name "PCLO-201" ; transcript_support_level 2 ; transcript_type protein_coding
PCLO--GLI3 HAVANA mRNA 1047 49317 . + . FI_gene_label "PCLO^ENSG00000186472.20" ; ID "PCLO--GLI3^ENST00000333891.14" ; Parent "PCLO--GLI3^PCLO^ENSG00000186472.20" ; ccdsid "CCDS47630.1" ; exon_id "ENSE00003847485.1" ; exon_number 1 ; gene_id "PCLO--GLI3^PCLO^ENSG00000186472.20" ; gene_name PCLO ; gene_type protein_coding ; havana_gene "OTTHUMG00000154853.15" ; havana_transcript "OTTHUMT00000337368.6" ; hgnc_id "HGNC:13406" ; level 2 ; orig_coord_info "chr7,83162345,83162592,-" ; protein_id "ENSP00000334319.8" ; tag not_organism_supported basic MANE_Select appris_principal_1 CCDS ; transcript_id "PCLO--GLI3^ENST00000333891.14" ; transcript_name "PCLO-201" ; transcript_support_level 2 ; transcript_type protein_coding
L1 and L2 created:
PCLO--GLI3 HAVANA gene 54086 88674 . + . FI_gene_label "GLI3^ENSG00000106571.15" ; ID "PCLO--GLI3^GLI3^ENSG00000106571.15" ; ccdsid "CCDS5465.1" ; exon_id "ENSE00001523285.1" ; exon_number 2 ; gene_id "PCLO--GLI3^GLI3^ENSG00000106571.15" ; gene_name GLI3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000023630.8" ; havana_transcript "OTTHUMT00000250806.4" ; hgnc_id "HGNC:4319" ; level 2 ; orig_coord_info "chr7,42223130,42223253,-" ; protein_id "ENSP00000379258.3" ; tag basic MANE_Select appris_principal_2 CCDS ; transcript_id "PCLO--GLI3^ENST00000395925.8" ; transcript_name "GLI3-201" ; transcript_support_level 5 ; transcript_type protein_coding
PCLO--GLI3 HAVANA mRNA 54086 88674 . + . FI_gene_label "GLI3^ENSG00000106571.15" ; ID "PCLO--GLI3^ENST00000395925.8" ; Parent "PCLO--GLI3^GLI3^ENSG00000106571.15" ; ccdsid "CCDS5465.1" ; exon_id "ENSE00001523285.1" ; exon_number 2 ; gene_id "PCLO--GLI3^GLI3^ENSG00000106571.15" ; gene_name GLI3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000023630.8" ; havana_transcript "OTTHUMT00000250806.4" ; hgnc_id "HGNC:4319" ; level 2 ; orig_coord_info "chr7,42223130,42223253,-" ; protein_id "ENSP00000379258.3" ; tag basic MANE_Select appris_principal_2 CCDS ; transcript_id "PCLO--GLI3^ENST00000395925.8" ; transcript_name "GLI3-201" ; transcript_support_level 5 ; transcript_type protein_coding
L1 and L2 created:
PDE4D--PPARGC1A HAVANA gene 63400 89105 . + . FI_gene_label "PPARGC1A^ENSG00000109819.9" ; ID "PDE4D--PPARGC1A^PPARGC1A^ENSG00000109819.9" ; ccdsid "CCDS3429.1" ; exon_id "ENSE00003849976.1" ; exon_number 1 ; gene_id "PDE4D--PPARGC1A^PPARGC1A^ENSG00000109819.9" ; gene_name PPARGC1A ; gene_type protein_coding ; havana_gene "OTTHUMG00000097747.3" ; havana_transcript "OTTHUMT00000214976.2" ; hgnc_id "HGNC:9237" ; level 2 ; orig_coord_info "chr4,23889904,23889957,-" ; protein_id "ENSP00000264867.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PDE4D--PPARGC1A^ENST00000264867.7" ; transcript_name "PPARGC1A-201" ; transcript_support_level 1 ; transcript_type protein_coding
PDE4D--PPARGC1A HAVANA mRNA 63400 89105 . + . FI_gene_label "PPARGC1A^ENSG00000109819.9" ; ID "PDE4D--PPARGC1A^ENST00000264867.7" ; Parent "PDE4D--PPARGC1A^PPARGC1A^ENSG00000109819.9" ; ccdsid "CCDS3429.1" ; exon_id "ENSE00003849976.1" ; exon_number 1 ; gene_id "PDE4D--PPARGC1A^PPARGC1A^ENSG00000109819.9" ; gene_name PPARGC1A ; gene_type protein_coding ; havana_gene "OTTHUMG00000097747.3" ; havana_transcript "OTTHUMT00000214976.2" ; hgnc_id "HGNC:9237" ; level 2 ; orig_coord_info "chr4,23889904,23889957,-" ; protein_id "ENSP00000264867.2" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PDE4D--PPARGC1A^ENST00000264867.7" ; transcript_name "PPARGC1A-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PDE4D--PPARGC1A HAVANA gene 19327 52202 . + . FI_gene_label "PDE4D^ENSG00000113448.19" ; ID "PDE4D--PPARGC1A^PDE4D^ENSG00000113448.19" ; exon_id "ENSE00001558796.1" ; exon_number 1 ; gene_id "PDE4D--PPARGC1A^PDE4D^ENSG00000113448.19" ; gene_name PDE4D ; gene_type protein_coding ; havana_gene "OTTHUMG00000162218.9" ; havana_transcript "OTTHUMT00000368104.1" ; hgnc_id "HGNC:8783" ; level 2 ; orig_coord_info "chr5,59768247,59768509,-" ; protein_id "ENSP00000308485.6" ; transcript_id "PDE4D--PPARGC1A^ENST00000309641.10" ; transcript_name "PDE4D-201" ; transcript_support_level 1 ; transcript_type nonsense_mediated_decay
PDE4D--PPARGC1A HAVANA mRNA 19327 52202 . + . FI_gene_label "PDE4D^ENSG00000113448.19" ; ID "PDE4D--PPARGC1A^ENST00000309641.10" ; Parent "PDE4D--PPARGC1A^PDE4D^ENSG00000113448.19" ; exon_id "ENSE00001558796.1" ; exon_number 1 ; gene_id "PDE4D--PPARGC1A^PDE4D^ENSG00000113448.19" ; gene_name PDE4D ; gene_type protein_coding ; havana_gene "OTTHUMG00000162218.9" ; havana_transcript "OTTHUMT00000368104.1" ; hgnc_id "HGNC:8783" ; level 2 ; orig_coord_info "chr5,59768247,59768509,-" ; protein_id "ENSP00000308485.6" ; transcript_id "PDE4D--PPARGC1A^ENST00000309641.10" ; transcript_name "PDE4D-201" ; transcript_support_level 1 ; transcript_type nonsense_mediated_decay
L1 and L2 created:
PDXDC1--NPIPB5 ENSEMBL gene 1610 14305 . + . FI_gene_label "PDXDC1^ENSG00000179889.19" ; ID "PDXDC1--NPIPB5^PDXDC1^ENSG00000179889.19" ; exon_id "ENSE00002269182.2" ; exon_number 1 ; gene_id "PDXDC1--NPIPB5^PDXDC1^ENSG00000179889.19" ; gene_name PDXDC1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000166304.6" ; hgnc_id "HGNC:28995" ; level 3 ; orig_coord_info "chr16,14975200,14975220,+" ; protein_id "ENSP00000322807.8" ; tag basic ; transcript_id "PDXDC1--NPIPB5^ENST00000325823.11" ; transcript_name "PDXDC1-201" ; transcript_support_level 5 ; transcript_type protein_coding
PDXDC1--NPIPB5 ENSEMBL mRNA 1610 14305 . + . FI_gene_label "PDXDC1^ENSG00000179889.19" ; ID "PDXDC1--NPIPB5^ENST00000325823.11" ; Parent "PDXDC1--NPIPB5^PDXDC1^ENSG00000179889.19" ; exon_id "ENSE00002269182.2" ; exon_number 1 ; gene_id "PDXDC1--NPIPB5^PDXDC1^ENSG00000179889.19" ; gene_name PDXDC1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000166304.6" ; hgnc_id "HGNC:28995" ; level 3 ; orig_coord_info "chr16,14975200,14975220,+" ; protein_id "ENSP00000322807.8" ; tag basic ; transcript_id "PDXDC1--NPIPB5^ENST00000325823.11" ; transcript_name "PDXDC1-201" ; transcript_support_level 5 ; transcript_type protein_coding
L1 and L2 created:
PDXDC1--NPIPB5 HAVANA gene 43624 46955 . + . FI_gene_label "NPIPB5^ENSG00000243716.10" ; ID "PDXDC1--NPIPB5^NPIPB5^ENSG00000243716.10" ; exon_id "ENSE00002265272.1" ; exon_number 3 ; gene_id "PDXDC1--NPIPB5^NPIPB5^ENSG00000243716.10" ; gene_name NPIPB5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163573.6" ; havana_transcript "OTTHUMT00000403183.2" ; hgnc_id "HGNC:37233" ; level 2 ; orig_coord_info "chr16,22513802,22513834,+" ; protein_id "ENSP00000440137.1" ; tag alternative_5_UTR mRNA_end_NF cds_end_NF ; transcript_id "PDXDC1--NPIPB5^ENST00000356156.7" ; transcript_name "NPIPB5-201" ; transcript_support_level 4 ; transcript_type protein_coding
PDXDC1--NPIPB5 HAVANA mRNA 43624 46955 . + . FI_gene_label "NPIPB5^ENSG00000243716.10" ; ID "PDXDC1--NPIPB5^ENST00000356156.7" ; Parent "PDXDC1--NPIPB5^NPIPB5^ENSG00000243716.10" ; exon_id "ENSE00002265272.1" ; exon_number 3 ; gene_id "PDXDC1--NPIPB5^NPIPB5^ENSG00000243716.10" ; gene_name NPIPB5 ; gene_type protein_coding ; havana_gene "OTTHUMG00000163573.6" ; havana_transcript "OTTHUMT00000403183.2" ; hgnc_id "HGNC:37233" ; level 2 ; orig_coord_info "chr16,22513802,22513834,+" ; protein_id "ENSP00000440137.1" ; tag alternative_5_UTR mRNA_end_NF cds_end_NF ; transcript_id "PDXDC1--NPIPB5^ENST00000356156.7" ; transcript_name "NPIPB5-201" ; transcript_support_level 4 ; transcript_type protein_coding
L1 and L2 created:
PIK3R4--AC068633.1 HAVANA gene 1001 25157 . + . FI_gene_label "PIK3R4^ENSG00000196455.8" ; ID "PIK3R4--AC068633.1^PIK3R4^ENSG00000196455.8" ; ccdsid "CCDS3067.1" ; exon_id "ENSE00001078058.1" ; exon_number 2 ; gene_id "PIK3R4--AC068633.1^PIK3R4^ENSG00000196455.8" ; gene_name PIK3R4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000159645.4" ; havana_transcript "OTTHUMT00000356668.2" ; hgnc_id "HGNC:8982" ; level 2 ; orig_coord_info "chr3,130744486,130745218,-" ; protein_id "ENSP00000349205.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PIK3R4--AC068633.1^ENST00000356763.8" ; transcript_name "PIK3R4-201" ; transcript_support_level 1 ; transcript_type protein_coding
PIK3R4--AC068633.1 HAVANA mRNA 1001 25157 . + . FI_gene_label "PIK3R4^ENSG00000196455.8" ; ID "PIK3R4--AC068633.1^ENST00000356763.8" ; Parent "PIK3R4--AC068633.1^PIK3R4^ENSG00000196455.8" ; ccdsid "CCDS3067.1" ; exon_id "ENSE00001078058.1" ; exon_number 2 ; gene_id "PIK3R4--AC068633.1^PIK3R4^ENSG00000196455.8" ; gene_name PIK3R4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000159645.4" ; havana_transcript "OTTHUMT00000356668.2" ; hgnc_id "HGNC:8982" ; level 2 ; orig_coord_info "chr3,130744486,130745218,-" ; protein_id "ENSP00000349205.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "PIK3R4--AC068633.1^ENST00000356763.8" ; transcript_name "PIK3R4-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
POLR2J4--UPK3BL1 HAVANA gene 7423 12249 . + . FI_gene_label "UPK3BL1^ENSG00000267368.1" ; ID "POLR2J4--UPK3BL1^UPK3BL1^ENSG00000267368.1" ; ccdsid "CCDS47675.1" ; exon_id "ENSE00001683829.2" ; exon_number 1 ; gene_id "POLR2J4--UPK3BL1^UPK3BL1^ENSG00000267368.1" ; gene_name UPK3BL1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000165036.2" ; havana_transcript "OTTHUMT00000381510.1" ; hgnc_id "HGNC:37278" ; level 2 ; orig_coord_info "chr7,102642630,102642741,-" ; protein_id "ENSP00000342938.8" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "POLR2J4--UPK3BL1^ENST00000340457.8" ; transcript_name "UPK3BL1-201" ; transcript_support_level 1 ; transcript_type protein_coding
POLR2J4--UPK3BL1 HAVANA mRNA 7423 12249 . + . FI_gene_label "UPK3BL1^ENSG00000267368.1" ; ID "POLR2J4--UPK3BL1^ENST00000340457.8" ; Parent "POLR2J4--UPK3BL1^UPK3BL1^ENSG00000267368.1" ; ccdsid "CCDS47675.1" ; exon_id "ENSE00001683829.2" ; exon_number 1 ; gene_id "POLR2J4--UPK3BL1^UPK3BL1^ENSG00000267368.1" ; gene_name UPK3BL1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000165036.2" ; havana_transcript "OTTHUMT00000381510.1" ; hgnc_id "HGNC:37278" ; level 2 ; orig_coord_info "chr7,102642630,102642741,-" ; protein_id "ENSP00000342938.8" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "POLR2J4--UPK3BL1^ENST00000340457.8" ; transcript_name "UPK3BL1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
PRUNE2--RFX3 ENSEMBL gene 20911 37867 . + . FI_gene_label "PRUNE2^ENSG00000106772.18" ; ID "PRUNE2--RFX3^PRUNE2^ENSG00000106772.18" ; exon_id "ENSE00003720311.1" ; exon_number 2 ; gene_id "PRUNE2--RFX3^PRUNE2^ENSG00000106772.18" ; gene_name PRUNE2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000020047.5" ; hgnc_id "HGNC:25209" ; level 3 ; orig_coord_info "chr9,76655423,76655480,-" ; protein_id "ENSP00000223609.7" ; tag basic ; transcript_id "PRUNE2--RFX3^ENST00000223609.10" ; transcript_name "PRUNE2-201" ; transcript_support_level 2 ; transcript_type protein_coding
PRUNE2--RFX3 ENSEMBL mRNA 20911 37867 . + . FI_gene_label "PRUNE2^ENSG00000106772.18" ; ID "PRUNE2--RFX3^ENST00000223609.10" ; Parent "PRUNE2--RFX3^PRUNE2^ENSG00000106772.18" ; exon_id "ENSE00003720311.1" ; exon_number 2 ; gene_id "PRUNE2--RFX3^PRUNE2^ENSG00000106772.18" ; gene_name PRUNE2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000020047.5" ; hgnc_id "HGNC:25209" ; level 3 ; orig_coord_info "chr9,76655423,76655480,-" ; protein_id "ENSP00000223609.7" ; tag basic ; transcript_id "PRUNE2--RFX3^ENST00000223609.10" ; transcript_name "PRUNE2-201" ; transcript_support_level 2 ; transcript_type protein_coding
L1 and L2 created:
PRUNE2--RFX3 ENSEMBL gene 42985 56300 . + . FI_gene_label "RFX3^ENSG00000080298.15" ; ID "PRUNE2--RFX3^RFX3^ENSG00000080298.15" ; ccdsid "CCDS75809.1" ; exon_id "ENSE00002707387.1" ; exon_number 3 ; gene_id "PRUNE2--RFX3^RFX3^ENSG00000080298.15" ; gene_name RFX3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000019456.2" ; hgnc_id "HGNC:9984" ; level 3 ; orig_coord_info "chr9,3395472,3395588,-" ; protein_id "ENSP00000303847.2" ; tag basic CCDS ; transcript_id "PRUNE2--RFX3^ENST00000302303.5" ; transcript_name "RFX3-201" ; transcript_support_level 1 ; transcript_type protein_coding
PRUNE2--RFX3 ENSEMBL mRNA 42985 56300 . + . FI_gene_label "RFX3^ENSG00000080298.15" ; ID "PRUNE2--RFX3^ENST00000302303.5" ; Parent "PRUNE2--RFX3^RFX3^ENSG00000080298.15" ; ccdsid "CCDS75809.1" ; exon_id "ENSE00002707387.1" ; exon_number 3 ; gene_id "PRUNE2--RFX3^RFX3^ENSG00000080298.15" ; gene_name RFX3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000019456.2" ; hgnc_id "HGNC:9984" ; level 3 ; orig_coord_info "chr9,3395472,3395588,-" ; protein_id "ENSP00000303847.2" ; tag basic CCDS ; transcript_id "PRUNE2--RFX3^ENST00000302303.5" ; transcript_name "RFX3-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
RBM14--RBM4 HAVANA gene 15043 21268 . + . FI_gene_label "RBM4^ENSG00000173933.21" ; ID "RBM14--RBM4^RBM4^ENSG00000173933.21" ; ccdsid "CCDS41676.1" ; exon_id "ENSE00003513724.1" ; exon_number 2 ; gene_id "RBM14--RBM4^RBM4^ENSG00000173933.21" ; gene_name RBM4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000154171.7" ; havana_transcript "OTTHUMT00000334210.2" ; hgnc_id "HGNC:9901" ; level 2 ; orig_coord_info "chr11,66639712,66640123,+" ; protein_id "ENSP00000309166.8" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "RBM14--RBM4^ENST00000310092.12" ; transcript_name "RBM4-201" ; transcript_support_level 1 ; transcript_type protein_coding
RBM14--RBM4 HAVANA mRNA 15043 21268 . + . FI_gene_label "RBM4^ENSG00000173933.21" ; ID "RBM14--RBM4^ENST00000310092.12" ; Parent "RBM14--RBM4^RBM4^ENSG00000173933.21" ; ccdsid "CCDS41676.1" ; exon_id "ENSE00003513724.1" ; exon_number 2 ; gene_id "RBM14--RBM4^RBM4^ENSG00000173933.21" ; gene_name RBM4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000154171.7" ; havana_transcript "OTTHUMT00000334210.2" ; hgnc_id "HGNC:9901" ; level 2 ; orig_coord_info "chr11,66639712,66640123,+" ; protein_id "ENSP00000309166.8" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "RBM14--RBM4^ENST00000310092.12" ; transcript_name "RBM4-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
RBM14--RBM4 HAVANA gene 1005 12006 . + . FI_gene_label "RBM14^ENSG00000239306.5" ; ID "RBM14--RBM4^RBM14^ENSG00000239306.5" ; ccdsid "CCDS8147.1" ; exon_id "ENSE00003902856.1" ; exon_number 1 ; gene_id "RBM14--RBM4^RBM14^ENSG00000239306.5" ; gene_name RBM14 ; gene_type protein_coding ; havana_gene "OTTHUMG00000140380.5" ; havana_transcript "OTTHUMT00000277128.1" ; hgnc_id "HGNC:14219" ; level 2 ; orig_coord_info "chr11,66616721,66617057,+" ; protein_id "ENSP00000311747.5" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "RBM14--RBM4^ENST00000310137.5" ; transcript_name "RBM14-201" ; transcript_support_level 1 ; transcript_type protein_coding
RBM14--RBM4 HAVANA mRNA 1005 12006 . + . FI_gene_label "RBM14^ENSG00000239306.5" ; ID "RBM14--RBM4^ENST00000310137.5" ; Parent "RBM14--RBM4^RBM14^ENSG00000239306.5" ; ccdsid "CCDS8147.1" ; exon_id "ENSE00003902856.1" ; exon_number 1 ; gene_id "RBM14--RBM4^RBM14^ENSG00000239306.5" ; gene_name RBM14 ; gene_type protein_coding ; havana_gene "OTTHUMG00000140380.5" ; havana_transcript "OTTHUMT00000277128.1" ; hgnc_id "HGNC:14219" ; level 2 ; orig_coord_info "chr11,66616721,66617057,+" ; protein_id "ENSP00000311747.5" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "RBM14--RBM4^ENST00000310137.5" ; transcript_name "RBM14-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
RNF144B--PAFAH1B2P1 HAVANA gene 1001 14171 . + . FI_gene_label "RNF144B^ENSG00000137393.10" ; ID "RNF144B--PAFAH1B2P1^RNF144B^ENSG00000137393.10" ; ccdsid "CCDS34345.1" ; exon_id "ENSE00003688740.1" ; exon_number 2 ; gene_id "RNF144B--PAFAH1B2P1^RNF144B^ENSG00000137393.10" ; gene_name RNF144B ; gene_type protein_coding ; havana_gene "OTTHUMG00000014322.2" ; havana_transcript "OTTHUMT00000039965.2" ; hgnc_id "HGNC:21578" ; level 2 ; orig_coord_info "chr6,18399535,18399699,+" ; protein_id "ENSP00000259939.4" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "RNF144B--PAFAH1B2P1^ENST00000259939.4" ; transcript_name "RNF144B-201" ; transcript_support_level 1 ; transcript_type protein_coding
RNF144B--PAFAH1B2P1 HAVANA mRNA 1001 14171 . + . FI_gene_label "RNF144B^ENSG00000137393.10" ; ID "RNF144B--PAFAH1B2P1^ENST00000259939.4" ; Parent "RNF144B--PAFAH1B2P1^RNF144B^ENSG00000137393.10" ; ccdsid "CCDS34345.1" ; exon_id "ENSE00003688740.1" ; exon_number 2 ; gene_id "RNF144B--PAFAH1B2P1^RNF144B^ENSG00000137393.10" ; gene_name RNF144B ; gene_type protein_coding ; havana_gene "OTTHUMG00000014322.2" ; havana_transcript "OTTHUMT00000039965.2" ; hgnc_id "HGNC:21578" ; level 2 ; orig_coord_info "chr6,18399535,18399699,+" ; protein_id "ENSP00000259939.4" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "RNF144B--PAFAH1B2P1^ENST00000259939.4" ; transcript_name "RNF144B-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
RNF144B--RN7SL91P HAVANA gene 1001 14171 . + . FI_gene_label "RNF144B^ENSG00000137393.10" ; ID "RNF144B--RN7SL91P^RNF144B^ENSG00000137393.10" ; ccdsid "CCDS34345.1" ; exon_id "ENSE00003688740.1" ; exon_number 2 ; gene_id "RNF144B--RN7SL91P^RNF144B^ENSG00000137393.10" ; gene_name RNF144B ; gene_type protein_coding ; havana_gene "OTTHUMG00000014322.2" ; havana_transcript "OTTHUMT00000039965.2" ; hgnc_id "HGNC:21578" ; level 2 ; orig_coord_info "chr6,18399535,18399699,+" ; protein_id "ENSP00000259939.4" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "RNF144B--RN7SL91P^ENST00000259939.4" ; transcript_name "RNF144B-201" ; transcript_support_level 1 ; transcript_type protein_coding
RNF144B--RN7SL91P HAVANA mRNA 1001 14171 . + . FI_gene_label "RNF144B^ENSG00000137393.10" ; ID "RNF144B--RN7SL91P^ENST00000259939.4" ; Parent "RNF144B--RN7SL91P^RNF144B^ENSG00000137393.10" ; ccdsid "CCDS34345.1" ; exon_id "ENSE00003688740.1" ; exon_number 2 ; gene_id "RNF144B--RN7SL91P^RNF144B^ENSG00000137393.10" ; gene_name RNF144B ; gene_type protein_coding ; havana_gene "OTTHUMG00000014322.2" ; havana_transcript "OTTHUMT00000039965.2" ; hgnc_id "HGNC:21578" ; level 2 ; orig_coord_info "chr6,18399535,18399699,+" ; protein_id "ENSP00000259939.4" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "RNF144B--RN7SL91P^ENST00000259939.4" ; transcript_name "RNF144B-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
SGMS1--BICC1 HAVANA gene 34050 43191 . + . FI_gene_label "BICC1^ENSG00000122870.12" ; ID "SGMS1--BICC1^BICC1^ENSG00000122870.12" ; exon_id "ENSE00001173664.3" ; exon_number 1 ; gene_id "SGMS1--BICC1^BICC1^ENSG00000122870.12" ; gene_name BICC1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000018271.4" ; havana_transcript "OTTHUMT00000048149.1" ; hgnc_id "HGNC:19351" ; level 2 ; orig_coord_info "chr10,58793559,58793615,+" ; protein_id "ENSP00000263103.1" ; tag basic ; transcript_id "SGMS1--BICC1^ENST00000263103.1" ; transcript_name "BICC1-201" ; transcript_support_level 1 ; transcript_type protein_coding
SGMS1--BICC1 HAVANA mRNA 34050 43191 . + . FI_gene_label "BICC1^ENSG00000122870.12" ; ID "SGMS1--BICC1^ENST00000263103.1" ; Parent "SGMS1--BICC1^BICC1^ENSG00000122870.12" ; exon_id "ENSE00001173664.3" ; exon_number 1 ; gene_id "SGMS1--BICC1^BICC1^ENSG00000122870.12" ; gene_name BICC1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000018271.4" ; havana_transcript "OTTHUMT00000048149.1" ; hgnc_id "HGNC:19351" ; level 2 ; orig_coord_info "chr10,58793559,58793615,+" ; protein_id "ENSP00000263103.1" ; tag basic ; transcript_id "SGMS1--BICC1^ENST00000263103.1" ; transcript_name "BICC1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
SGMS1--BICC1 ENSEMBL gene 11156 16060 . + . FI_gene_label "SGMS1^ENSG00000198964.14" ; ID "SGMS1--BICC1^SGMS1^ENSG00000198964.14" ; exon_id "ENSE00002206547.1" ; exon_number 1 ; gene_id "SGMS1--BICC1^SGMS1^ENSG00000198964.14" ; gene_name SGMS1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000018231.8" ; hgnc_id "HGNC:29799" ; level 3 ; orig_coord_info "chr10,50343492,50344114,-" ; protein_id "ENSP00000355235.2" ; tag basic ; transcript_id "SGMS1--BICC1^ENST00000361543.3" ; transcript_name "SGMS1-201" ; transcript_support_level 1 ; transcript_type protein_coding
SGMS1--BICC1 ENSEMBL mRNA 11156 16060 . + . FI_gene_label "SGMS1^ENSG00000198964.14" ; ID "SGMS1--BICC1^ENST00000361543.3" ; Parent "SGMS1--BICC1^SGMS1^ENSG00000198964.14" ; exon_id "ENSE00002206547.1" ; exon_number 1 ; gene_id "SGMS1--BICC1^SGMS1^ENSG00000198964.14" ; gene_name SGMS1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000018231.8" ; hgnc_id "HGNC:29799" ; level 3 ; orig_coord_info "chr10,50343492,50344114,-" ; protein_id "ENSP00000355235.2" ; tag basic ; transcript_id "SGMS1--BICC1^ENST00000361543.3" ; transcript_name "SGMS1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
SLC12A7--AC092266.1 HAVANA gene 1001 26212 . + . FI_gene_label "SLC12A7^ENSG00000113504.21" ; ID "SLC12A7--AC092266.1^SLC12A7^ENSG00000113504.21" ; ccdsid "CCDS34129.1" ; exon_id "ENSE00002055502.3" ; exon_number 1 ; gene_id "SLC12A7--AC092266.1^SLC12A7^ENSG00000113504.21" ; gene_name SLC12A7 ; gene_type protein_coding ; havana_gene "OTTHUMG00000161931.10" ; havana_transcript "OTTHUMT00000366446.4" ; hgnc_id "HGNC:10915" ; level 2 ; orig_coord_info "chr5,1111868,1111991,-" ; protein_id "ENSP00000264930.5" ; tag dotter_confirmed non_canonical_conserved basic MANE_Select appris_principal_1 CCDS ; transcript_id "SLC12A7--AC092266.1^ENST00000264930.10" ; transcript_name "SLC12A7-201" ; transcript_support_level 1 ; transcript_type protein_coding
SLC12A7--AC092266.1 HAVANA mRNA 1001 26212 . + . FI_gene_label "SLC12A7^ENSG00000113504.21" ; ID "SLC12A7--AC092266.1^ENST00000264930.10" ; Parent "SLC12A7--AC092266.1^SLC12A7^ENSG00000113504.21" ; ccdsid "CCDS34129.1" ; exon_id "ENSE00002055502.3" ; exon_number 1 ; gene_id "SLC12A7--AC092266.1^SLC12A7^ENSG00000113504.21" ; gene_name SLC12A7 ; gene_type protein_coding ; havana_gene "OTTHUMG00000161931.10" ; havana_transcript "OTTHUMT00000366446.4" ; hgnc_id "HGNC:10915" ; level 2 ; orig_coord_info "chr5,1111868,1111991,-" ; protein_id "ENSP00000264930.5" ; tag dotter_confirmed non_canonical_conserved basic MANE_Select appris_principal_1 CCDS ; transcript_id "SLC12A7--AC092266.1^ENST00000264930.10" ; transcript_name "SLC12A7-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
SLC12A7--LSINCT5 HAVANA gene 1001 26212 . + . FI_gene_label "SLC12A7^ENSG00000113504.21" ; ID "SLC12A7--LSINCT5^SLC12A7^ENSG00000113504.21" ; ccdsid "CCDS34129.1" ; exon_id "ENSE00002055502.3" ; exon_number 1 ; gene_id "SLC12A7--LSINCT5^SLC12A7^ENSG00000113504.21" ; gene_name SLC12A7 ; gene_type protein_coding ; havana_gene "OTTHUMG00000161931.10" ; havana_transcript "OTTHUMT00000366446.4" ; hgnc_id "HGNC:10915" ; level 2 ; orig_coord_info "chr5,1111868,1111991,-" ; protein_id "ENSP00000264930.5" ; tag dotter_confirmed non_canonical_conserved basic MANE_Select appris_principal_1 CCDS ; transcript_id "SLC12A7--LSINCT5^ENST00000264930.10" ; transcript_name "SLC12A7-201" ; transcript_support_level 1 ; transcript_type protein_coding
SLC12A7--LSINCT5 HAVANA mRNA 1001 26212 . + . FI_gene_label "SLC12A7^ENSG00000113504.21" ; ID "SLC12A7--LSINCT5^ENST00000264930.10" ; Parent "SLC12A7--LSINCT5^SLC12A7^ENSG00000113504.21" ; ccdsid "CCDS34129.1" ; exon_id "ENSE00002055502.3" ; exon_number 1 ; gene_id "SLC12A7--LSINCT5^SLC12A7^ENSG00000113504.21" ; gene_name SLC12A7 ; gene_type protein_coding ; havana_gene "OTTHUMG00000161931.10" ; havana_transcript "OTTHUMT00000366446.4" ; hgnc_id "HGNC:10915" ; level 2 ; orig_coord_info "chr5,1111868,1111991,-" ; protein_id "ENSP00000264930.5" ; tag dotter_confirmed non_canonical_conserved basic MANE_Select appris_principal_1 CCDS ; transcript_id "SLC12A7--LSINCT5^ENST00000264930.10" ; transcript_name "SLC12A7-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
SLC45A2--AMACR HAVANA gene 1001 10216 . + . FI_gene_label "SLC45A2^ENSG00000164175.15" ; ID "SLC45A2--AMACR^SLC45A2^ENSG00000164175.15" ; ccdsid "CCDS3901.1" ; exon_id "ENSE00001953232.2" ; exon_number 1 ; gene_id "SLC45A2--AMACR^SLC45A2^ENSG00000164175.15" ; gene_name SLC45A2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000090719.6" ; havana_transcript "OTTHUMT00000207443.3" ; hgnc_id "HGNC:16472" ; level 2 ; orig_coord_info "chr5,33984199,33984583,-" ; protein_id "ENSP00000296589.4" ; tag basic MANE_Select appris_principal_2 CCDS ; transcript_id "SLC45A2--AMACR^ENST00000296589.9" ; transcript_name "SLC45A2-201" ; transcript_support_level 1 ; transcript_type protein_coding
SLC45A2--AMACR HAVANA mRNA 1001 10216 . + . FI_gene_label "SLC45A2^ENSG00000164175.15" ; ID "SLC45A2--AMACR^ENST00000296589.9" ; Parent "SLC45A2--AMACR^SLC45A2^ENSG00000164175.15" ; ccdsid "CCDS3901.1" ; exon_id "ENSE00001953232.2" ; exon_number 1 ; gene_id "SLC45A2--AMACR^SLC45A2^ENSG00000164175.15" ; gene_name SLC45A2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000090719.6" ; havana_transcript "OTTHUMT00000207443.3" ; hgnc_id "HGNC:16472" ; level 2 ; orig_coord_info "chr5,33984199,33984583,-" ; protein_id "ENSP00000296589.4" ; tag basic MANE_Select appris_principal_2 CCDS ; transcript_id "SLC45A2--AMACR^ENST00000296589.9" ; transcript_name "SLC45A2-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
SLC45A2--AMACR HAVANA gene 13271 24063 . + . FI_gene_label "AMACR^ENSG00000242110.8" ; ID "SLC45A2--AMACR^AMACR^ENSG00000242110.8" ; ccdsid "CCDS3902.1" ; exon_id "ENSE00001953485.2" ; exon_number 1 ; gene_id "SLC45A2--AMACR^AMACR^ENSG00000242110.8" ; gene_name AMACR ; gene_type protein_coding ; havana_gene "OTTHUMG00000090734.3" ; havana_transcript "OTTHUMT00000207467.2" ; hgnc_id "HGNC:451" ; level 2 ; orig_coord_info "chr5,34007773,34008019,-" ; protein_id "ENSP00000334424.6" ; tag basic MANE_Select CCDS ; transcript_id "SLC45A2--AMACR^ENST00000335606.11" ; transcript_name "AMACR-201" ; transcript_support_level 1 ; transcript_type protein_coding
SLC45A2--AMACR HAVANA mRNA 13271 24063 . + . FI_gene_label "AMACR^ENSG00000242110.8" ; ID "SLC45A2--AMACR^ENST00000335606.11" ; Parent "SLC45A2--AMACR^AMACR^ENSG00000242110.8" ; ccdsid "CCDS3902.1" ; exon_id "ENSE00001953485.2" ; exon_number 1 ; gene_id "SLC45A2--AMACR^AMACR^ENSG00000242110.8" ; gene_name AMACR ; gene_type protein_coding ; havana_gene "OTTHUMG00000090734.3" ; havana_transcript "OTTHUMT00000207467.2" ; hgnc_id "HGNC:451" ; level 2 ; orig_coord_info "chr5,34007773,34008019,-" ; protein_id "ENSP00000334424.6" ; tag basic MANE_Select CCDS ; transcript_id "SLC45A2--AMACR^ENST00000335606.11" ; transcript_name "AMACR-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
SNF8--ASTN2 HAVANA gene 33115 47545 . + . FI_gene_label "ASTN2^ENSG00000148219.18" ; ID "SNF8--ASTN2^ASTN2^ENSG00000148219.18" ; ccdsid "CCDS48009.2" ; exon_id "ENSE00001518668.2" ; exon_number 1 ; gene_id "SNF8--ASTN2^ASTN2^ENSG00000148219.18" ; gene_name ASTN2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000021013.2" ; havana_transcript "OTTHUMT00000055429.1" ; hgnc_id "HGNC:17021" ; level 2 ; orig_coord_info "chr9,116686697,116686805,-" ; protein_id "ENSP00000288520.5" ; tag basic CCDS ; transcript_id "SNF8--ASTN2^ENST00000288520.9" ; transcript_name "ASTN2-201" ; transcript_support_level 1 ; transcript_type protein_coding
SNF8--ASTN2 HAVANA mRNA 33115 47545 . + . FI_gene_label "ASTN2^ENSG00000148219.18" ; ID "SNF8--ASTN2^ENST00000288520.9" ; Parent "SNF8--ASTN2^ASTN2^ENSG00000148219.18" ; ccdsid "CCDS48009.2" ; exon_id "ENSE00001518668.2" ; exon_number 1 ; gene_id "SNF8--ASTN2^ASTN2^ENSG00000148219.18" ; gene_name ASTN2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000021013.2" ; havana_transcript "OTTHUMT00000055429.1" ; hgnc_id "HGNC:17021" ; level 2 ; orig_coord_info "chr9,116686697,116686805,-" ; protein_id "ENSP00000288520.5" ; tag basic CCDS ; transcript_id "SNF8--ASTN2^ENST00000288520.9" ; transcript_name "ASTN2-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
SNF8--ASTN2 HAVANA gene 1033 10819 . + . FI_gene_label "SNF8^ENSG00000159210.10" ; ID "SNF8--ASTN2^SNF8^ENSG00000159210.10" ; ccdsid "CCDS82156.1" ; exon_id "ENSE00002062813.1" ; exon_number 1 ; gene_id "SNF8--ASTN2^SNF8^ENSG00000159210.10" ; gene_name SNF8 ; gene_type protein_coding ; havana_gene "OTTHUMG00000160569.5" ; havana_transcript "OTTHUMT00000361173.1" ; hgnc_id "HGNC:17028" ; level 2 ; orig_coord_info "chr17,48944681,48944734,-" ; protein_id "ENSP00000290330.3" ; tag basic appris_principal_1 CCDS ; transcript_id "SNF8--ASTN2^ENST00000290330.7" ; transcript_name "SNF8-201" ; transcript_support_level 1 ; transcript_type protein_coding
SNF8--ASTN2 HAVANA mRNA 1033 10819 . + . FI_gene_label "SNF8^ENSG00000159210.10" ; ID "SNF8--ASTN2^ENST00000290330.7" ; Parent "SNF8--ASTN2^SNF8^ENSG00000159210.10" ; ccdsid "CCDS82156.1" ; exon_id "ENSE00002062813.1" ; exon_number 1 ; gene_id "SNF8--ASTN2^SNF8^ENSG00000159210.10" ; gene_name SNF8 ; gene_type protein_coding ; havana_gene "OTTHUMG00000160569.5" ; havana_transcript "OTTHUMT00000361173.1" ; hgnc_id "HGNC:17028" ; level 2 ; orig_coord_info "chr17,48944681,48944734,-" ; protein_id "ENSP00000290330.3" ; tag basic appris_principal_1 CCDS ; transcript_id "SNF8--ASTN2^ENST00000290330.7" ; transcript_name "SNF8-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
STX16--NPEPL1 HAVANA gene 1021 7754 . + . FI_gene_label "STX16^ENSG00000124222.22" ; ID "STX16--NPEPL1^STX16^ENSG00000124222.22" ; exon_id "ENSE00003459479.1" ; exon_number 3 ; gene_id "STX16--NPEPL1^STX16^ENSG00000124222.22" ; gene_name STX16 ; gene_type protein_coding ; havana_gene "OTTHUMG00000033084.8" ; havana_transcript "OTTHUMT00000267911.2" ; hgnc_id "HGNC:11431" ; level 2 ; orig_coord_info "chr20,58667505,58667597,+" ; protein_id "ENSP00000312086.8" ; tag alternative_5_UTR mRNA_end_NF cds_end_NF ; transcript_id "STX16--NPEPL1^ENST00000312283.12" ; transcript_name "STX16-201" ; transcript_support_level 3 ; transcript_type protein_coding
STX16--NPEPL1 HAVANA mRNA 1021 7754 . + . FI_gene_label "STX16^ENSG00000124222.22" ; ID "STX16--NPEPL1^ENST00000312283.12" ; Parent "STX16--NPEPL1^STX16^ENSG00000124222.22" ; exon_id "ENSE00003459479.1" ; exon_number 3 ; gene_id "STX16--NPEPL1^STX16^ENSG00000124222.22" ; gene_name STX16 ; gene_type protein_coding ; havana_gene "OTTHUMG00000033084.8" ; havana_transcript "OTTHUMT00000267911.2" ; hgnc_id "HGNC:11431" ; level 2 ; orig_coord_info "chr20,58667505,58667597,+" ; protein_id "ENSP00000312086.8" ; tag alternative_5_UTR mRNA_end_NF cds_end_NF ; transcript_id "STX16--NPEPL1^ENST00000312283.12" ; transcript_name "STX16-201" ; transcript_support_level 3 ; transcript_type protein_coding
L1 and L2 created:
STX16--NPEPL1 HAVANA gene 18353 29399 . + . FI_gene_label "NPEPL1^ENSG00000215440.12" ; ID "STX16--NPEPL1^NPEPL1^ENSG00000215440.12" ; ccdsid "CCDS46621.1" ; exon_id "ENSE00001408052.7" ; exon_number 1 ; gene_id "STX16--NPEPL1^NPEPL1^ENSG00000215440.12" ; gene_name NPEPL1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000033060.8" ; havana_transcript "OTTHUMT00000080402.7" ; hgnc_id "HGNC:16244" ; level 2 ; orig_coord_info "chr20,58692901,58693050,+" ; protein_id "ENSP00000348395.6" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "STX16--NPEPL1^ENST00000356091.11" ; transcript_name "NPEPL1-201" ; transcript_support_level 1 ; transcript_type protein_coding
STX16--NPEPL1 HAVANA mRNA 18353 29399 . + . FI_gene_label "NPEPL1^ENSG00000215440.12" ; ID "STX16--NPEPL1^ENST00000356091.11" ; Parent "STX16--NPEPL1^NPEPL1^ENSG00000215440.12" ; ccdsid "CCDS46621.1" ; exon_id "ENSE00001408052.7" ; exon_number 1 ; gene_id "STX16--NPEPL1^NPEPL1^ENSG00000215440.12" ; gene_name NPEPL1 ; gene_type protein_coding ; havana_gene "OTTHUMG00000033060.8" ; havana_transcript "OTTHUMT00000080402.7" ; hgnc_id "HGNC:16244" ; level 2 ; orig_coord_info "chr20,58692901,58693050,+" ; protein_id "ENSP00000348395.6" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "STX16--NPEPL1^ENST00000356091.11" ; transcript_name "NPEPL1-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
SUGCT--DDC HAVANA gene 1001 22748 . + . FI_gene_label "SUGCT^ENSG00000175600.16" ; ID "SUGCT--DDC^SUGCT^ENSG00000175600.16" ; exon_id "ENSE00001554618.3" ; exon_number 1 ; gene_id "SUGCT--DDC^SUGCT^ENSG00000175600.16" ; gene_name SUGCT ; gene_type protein_coding ; havana_gene "OTTHUMG00000155094.6" ; havana_transcript "OTTHUMT00000338388.1" ; hgnc_id "HGNC:16001" ; level 2 ; orig_coord_info "chr7,40135021,40135120,+" ; protein_id "ENSP00000338475.5" ; tag upstream_ATG basic MANE_Select appris_alternative_2 ; transcript_id "SUGCT--DDC^ENST00000335693.9" ; transcript_name "SUGCT-201" ; transcript_support_level 1 ; transcript_type protein_coding
SUGCT--DDC HAVANA mRNA 1001 22748 . + . FI_gene_label "SUGCT^ENSG00000175600.16" ; ID "SUGCT--DDC^ENST00000335693.9" ; Parent "SUGCT--DDC^SUGCT^ENSG00000175600.16" ; exon_id "ENSE00001554618.3" ; exon_number 1 ; gene_id "SUGCT--DDC^SUGCT^ENSG00000175600.16" ; gene_name SUGCT ; gene_type protein_coding ; havana_gene "OTTHUMG00000155094.6" ; havana_transcript "OTTHUMT00000338388.1" ; hgnc_id "HGNC:16001" ; level 2 ; orig_coord_info "chr7,40135021,40135120,+" ; protein_id "ENSP00000338475.5" ; tag upstream_ATG basic MANE_Select appris_alternative_2 ; transcript_id "SUGCT--DDC^ENST00000335693.9" ; transcript_name "SUGCT-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
SUGCT--DDC HAVANA gene 28177 46792 . + . FI_gene_label "DDC^ENSG00000132437.18" ; ID "SUGCT--DDC^DDC^ENSG00000132437.18" ; ccdsid "CCDS5511.1" ; exon_id "ENSE00001282238.3" ; exon_number 2 ; gene_id "SUGCT--DDC^DDC^ENSG00000132437.18" ; gene_name DDC ; gene_type protein_coding ; havana_gene "OTTHUMG00000023353.7" ; havana_transcript "OTTHUMT00000251379.1" ; hgnc_id "HGNC:2719" ; level 2 ; orig_coord_info "chr7,50543885,50544085,-" ; protein_id "ENSP00000350616.5" ; tag basic appris_principal_1 CCDS ; transcript_id "SUGCT--DDC^ENST00000357936.9" ; transcript_name "DDC-201" ; transcript_support_level 1 ; transcript_type protein_coding
SUGCT--DDC HAVANA mRNA 28177 46792 . + . FI_gene_label "DDC^ENSG00000132437.18" ; ID "SUGCT--DDC^ENST00000357936.9" ; Parent "SUGCT--DDC^DDC^ENSG00000132437.18" ; ccdsid "CCDS5511.1" ; exon_id "ENSE00001282238.3" ; exon_number 2 ; gene_id "SUGCT--DDC^DDC^ENSG00000132437.18" ; gene_name DDC ; gene_type protein_coding ; havana_gene "OTTHUMG00000023353.7" ; havana_transcript "OTTHUMT00000251379.1" ; hgnc_id "HGNC:2719" ; level 2 ; orig_coord_info "chr7,50543885,50544085,-" ; protein_id "ENSP00000350616.5" ; tag basic appris_principal_1 CCDS ; transcript_id "SUGCT--DDC^ENST00000357936.9" ; transcript_name "DDC-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
TEX48--DNAJC16 HAVANA gene 8049 21890 . + . FI_gene_label "DNAJC16^ENSG00000116138.13" ; ID "TEX48--DNAJC16^DNAJC16^ENSG00000116138.13" ; exon_id "ENSE00002151398.1" ; exon_number 2 ; gene_id "TEX48--DNAJC16^DNAJC16^ENSG00000116138.13" ; gene_name DNAJC16 ; gene_type protein_coding ; havana_gene "OTTHUMG00000002358.4" ; havana_transcript "OTTHUMT00000006765.1" ; hgnc_id "HGNC:29157" ; level 2 ; orig_coord_info "chr1,15529106,15529272,+" ; protein_id "ENSP00000364998.1" ; tag basic ; transcript_id "TEX48--DNAJC16^ENST00000375838.5" ; transcript_name "DNAJC16-201" ; transcript_support_level 5 ; transcript_type protein_coding
TEX48--DNAJC16 HAVANA mRNA 8049 21890 . + . FI_gene_label "DNAJC16^ENSG00000116138.13" ; ID "TEX48--DNAJC16^ENST00000375838.5" ; Parent "TEX48--DNAJC16^DNAJC16^ENSG00000116138.13" ; exon_id "ENSE00002151398.1" ; exon_number 2 ; gene_id "TEX48--DNAJC16^DNAJC16^ENSG00000116138.13" ; gene_name DNAJC16 ; gene_type protein_coding ; havana_gene "OTTHUMG00000002358.4" ; havana_transcript "OTTHUMT00000006765.1" ; hgnc_id "HGNC:29157" ; level 2 ; orig_coord_info "chr1,15529106,15529272,+" ; protein_id "ENSP00000364998.1" ; tag basic ; transcript_id "TEX48--DNAJC16^ENST00000375838.5" ; transcript_name "DNAJC16-201" ; transcript_support_level 5 ; transcript_type protein_coding
L1 and L2 created:
TEX48--DNAJC16 HAVANA gene 1001 5048 . + . FI_gene_label "TEX48^ENSG00000230601.7" ; ID "TEX48--DNAJC16^TEX48^ENSG00000230601.7" ; ccdsid "CCDS83406.1" ; exon_id "ENSE00003742884.1" ; exon_number 2 ; gene_id "TEX48--DNAJC16^TEX48^ENSG00000230601.7" ; gene_name TEX48 ; gene_type protein_coding ; havana_gene "OTTHUMG00000020542.3" ; havana_transcript "OTTHUMT00000489240.2" ; hgnc_id "HGNC:52393" ; level 1 ; orig_coord_info "chr9,114671720,114671723,-" ; protein_id "ENSP00000490263.1" ; tag RNA_Seq_supported_only basic MANE_Select appris_principal_2 exp_conf CCDS ; transcript_id "TEX48--DNAJC16^ENST00000436752.3" ; transcript_name "TEX48-201" ; transcript_support_level 5 ; transcript_type protein_coding
TEX48--DNAJC16 HAVANA mRNA 1001 5048 . + . FI_gene_label "TEX48^ENSG00000230601.7" ; ID "TEX48--DNAJC16^ENST00000436752.3" ; Parent "TEX48--DNAJC16^TEX48^ENSG00000230601.7" ; ccdsid "CCDS83406.1" ; exon_id "ENSE00003742884.1" ; exon_number 2 ; gene_id "TEX48--DNAJC16^TEX48^ENSG00000230601.7" ; gene_name TEX48 ; gene_type protein_coding ; havana_gene "OTTHUMG00000020542.3" ; havana_transcript "OTTHUMT00000489240.2" ; hgnc_id "HGNC:52393" ; level 1 ; orig_coord_info "chr9,114671720,114671723,-" ; protein_id "ENSP00000490263.1" ; tag RNA_Seq_supported_only basic MANE_Select appris_principal_2 exp_conf CCDS ; transcript_id "TEX48--DNAJC16^ENST00000436752.3" ; transcript_name "TEX48-201" ; transcript_support_level 5 ; transcript_type protein_coding
L1 and L2 created:
TLK2--AC240565.1 HAVANA gene 4784 35054 . + . FI_gene_label "TLK2^ENSG00000146872.18" ; ID "TLK2--AC240565.1^TLK2^ENSG00000146872.18" ; ccdsid "CCDS62283.1" ; exon_id "ENSE00003568961.1" ; exon_number 2 ; gene_id "TLK2--AC240565.1^TLK2^ENSG00000146872.18" ; gene_name TLK2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000179176.3" ; havana_transcript "OTTHUMT00000445140.1" ; hgnc_id "HGNC:11842" ; level 2 ; orig_coord_info "chr17,62481126,62481206,+" ; protein_id "ENSP00000316512.9" ; tag basic CCDS ; transcript_id "TLK2--AC240565.1^ENST00000326270.13" ; transcript_name "TLK2-201" ; transcript_support_level 1 ; transcript_type protein_coding
TLK2--AC240565.1 HAVANA mRNA 4784 35054 . + . FI_gene_label "TLK2^ENSG00000146872.18" ; ID "TLK2--AC240565.1^ENST00000326270.13" ; Parent "TLK2--AC240565.1^TLK2^ENSG00000146872.18" ; ccdsid "CCDS62283.1" ; exon_id "ENSE00003568961.1" ; exon_number 2 ; gene_id "TLK2--AC240565.1^TLK2^ENSG00000146872.18" ; gene_name TLK2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000179176.3" ; havana_transcript "OTTHUMT00000445140.1" ; hgnc_id "HGNC:11842" ; level 2 ; orig_coord_info "chr17,62481126,62481206,+" ; protein_id "ENSP00000316512.9" ; tag basic CCDS ; transcript_id "TLK2--AC240565.1^ENST00000326270.13" ; transcript_name "TLK2-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
TMED7--TICAM2 HAVANA gene 11056 15867 . + . FI_gene_label "TICAM2^ENSG00000243414.6" ; ID "TMED7--TICAM2^TICAM2^ENSG00000243414.6" ; ccdsid "CCDS4119.1" ; exon_id "ENSE00001741902.2" ; exon_number 2 ; gene_id "TMED7--TICAM2^TICAM2^ENSG00000243414.6" ; gene_name TICAM2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000162905.2" ; havana_transcript "OTTHUMT00000338755.1" ; hgnc_id "HGNC:21354" ; level 2 ; orig_coord_info "chr5,115580552,115581256,-" ; protein_id "ENSP00000415139.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "TMED7--TICAM2^ENST00000427199.3" ; transcript_name "TICAM2-201" ; transcript_support_level 1 ; transcript_type protein_coding
TMED7--TICAM2 HAVANA mRNA 11056 15867 . + . FI_gene_label "TICAM2^ENSG00000243414.6" ; ID "TMED7--TICAM2^ENST00000427199.3" ; Parent "TMED7--TICAM2^TICAM2^ENSG00000243414.6" ; ccdsid "CCDS4119.1" ; exon_id "ENSE00001741902.2" ; exon_number 2 ; gene_id "TMED7--TICAM2^TICAM2^ENSG00000243414.6" ; gene_name TICAM2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000162905.2" ; havana_transcript "OTTHUMT00000338755.1" ; hgnc_id "HGNC:21354" ; level 2 ; orig_coord_info "chr5,115580552,115581256,-" ; protein_id "ENSP00000415139.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "TMED7--TICAM2^ENST00000427199.3" ; transcript_name "TICAM2-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
TMED7--TICAM2 HAVANA gene 2138 8055 . + . FI_gene_label "TMED7^ENSG00000134970.14" ; ID "TMED7--TICAM2^TMED7^ENSG00000134970.14" ; ccdsid "CCDS4120.1" ; exon_id "ENSE00002252373.2" ; exon_number 1 ; gene_id "TMED7--TICAM2^TMED7^ENSG00000134970.14" ; gene_name TMED7 ; gene_type protein_coding ; havana_gene "OTTHUMG00000132013.8" ; havana_transcript "OTTHUMT00000254990.5" ; hgnc_id "HGNC:24253" ; level 2 ; orig_coord_info "chr5,115625601,115625792,-" ; protein_id "ENSP00000405926.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "TMED7--TICAM2^ENST00000456936.4" ; transcript_name "TMED7-201" ; transcript_support_level 1 ; transcript_type protein_coding
TMED7--TICAM2 HAVANA mRNA 2138 8055 . + . FI_gene_label "TMED7^ENSG00000134970.14" ; ID "TMED7--TICAM2^ENST00000456936.4" ; Parent "TMED7--TICAM2^TMED7^ENSG00000134970.14" ; ccdsid "CCDS4120.1" ; exon_id "ENSE00002252373.2" ; exon_number 1 ; gene_id "TMED7--TICAM2^TMED7^ENSG00000134970.14" ; gene_name TMED7 ; gene_type protein_coding ; havana_gene "OTTHUMG00000132013.8" ; havana_transcript "OTTHUMT00000254990.5" ; hgnc_id "HGNC:24253" ; level 2 ; orig_coord_info "chr5,115625601,115625792,-" ; protein_id "ENSP00000405926.3" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "TMED7--TICAM2^ENST00000456936.4" ; transcript_name "TMED7-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
TMPRSS2--ERG HAVANA gene 30939 50248 . + . FI_gene_label "ERG^ENSG00000157554.19" ; ID "TMPRSS2--ERG^ERG^ENSG00000157554.19" ; ccdsid "CCDS13658.1" ; exon_id "ENSE00001931764.2" ; exon_number 1 ; gene_id "TMPRSS2--ERG^ERG^ENSG00000157554.19" ; gene_name ERG ; gene_type protein_coding ; havana_gene "OTTHUMG00000090767.4" ; havana_transcript "OTTHUMT00000207531.2" ; hgnc_id "HGNC:3446" ; level 2 ; orig_coord_info "chr21,38498363,38498380,-" ; protein_id "ENSP00000288319.7" ; tag CAGE_supported_TSS basic MANE_Select appris_principal_1 CCDS ; transcript_id "TMPRSS2--ERG^ENST00000288319.12" ; transcript_name "ERG-201" ; transcript_support_level 1 ; transcript_type protein_coding
TMPRSS2--ERG HAVANA mRNA 30939 50248 . + . FI_gene_label "ERG^ENSG00000157554.19" ; ID "TMPRSS2--ERG^ENST00000288319.12" ; Parent "TMPRSS2--ERG^ERG^ENSG00000157554.19" ; ccdsid "CCDS13658.1" ; exon_id "ENSE00001931764.2" ; exon_number 1 ; gene_id "TMPRSS2--ERG^ERG^ENSG00000157554.19" ; gene_name ERG ; gene_type protein_coding ; havana_gene "OTTHUMG00000090767.4" ; havana_transcript "OTTHUMT00000207531.2" ; hgnc_id "HGNC:3446" ; level 2 ; orig_coord_info "chr21,38498363,38498380,-" ; protein_id "ENSP00000288319.7" ; tag CAGE_supported_TSS basic MANE_Select appris_principal_1 CCDS ; transcript_id "TMPRSS2--ERG^ENST00000288319.12" ; transcript_name "ERG-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
TMPRSS2--ERG HAVANA gene 4575 23486 . + . FI_gene_label "TMPRSS2^ENSG00000184012.14" ; ID "TMPRSS2--ERG^TMPRSS2^ENSG00000184012.14" ; ccdsid "CCDS33564.1" ; exon_id "ENSE00003502036.1" ; exon_number 2 ; gene_id "TMPRSS2--ERG^TMPRSS2^ENSG00000184012.14" ; gene_name TMPRSS2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000086762.7" ; havana_transcript "OTTHUMT00000195189.2" ; hgnc_id "HGNC:11876" ; level 2 ; orig_coord_info "chr21,41498119,41498133,-" ; protein_id "ENSP00000330330.5" ; tag CAGE_supported_TSS basic MANE_Select appris_principal_2 CCDS ; transcript_id "TMPRSS2--ERG^ENST00000332149.10" ; transcript_name "TMPRSS2-201" ; transcript_support_level 1 ; transcript_type protein_coding
TMPRSS2--ERG HAVANA mRNA 4575 23486 . + . FI_gene_label "TMPRSS2^ENSG00000184012.14" ; ID "TMPRSS2--ERG^ENST00000332149.10" ; Parent "TMPRSS2--ERG^TMPRSS2^ENSG00000184012.14" ; ccdsid "CCDS33564.1" ; exon_id "ENSE00003502036.1" ; exon_number 2 ; gene_id "TMPRSS2--ERG^TMPRSS2^ENSG00000184012.14" ; gene_name TMPRSS2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000086762.7" ; havana_transcript "OTTHUMT00000195189.2" ; hgnc_id "HGNC:11876" ; level 2 ; orig_coord_info "chr21,41498119,41498133,-" ; protein_id "ENSP00000330330.5" ; tag CAGE_supported_TSS basic MANE_Select appris_principal_2 CCDS ; transcript_id "TMPRSS2--ERG^ENST00000332149.10" ; transcript_name "TMPRSS2-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
TVP23C--CDRT4 HAVANA gene 1052 15760 . + . FI_gene_label "TVP23C^ENSG00000175106.17" ; ID "TVP23C--CDRT4^TVP23C^ENSG00000175106.17" ; ccdsid "CCDS11170.1" ; exon_id "ENSE00001105678.2" ; exon_number 1 ; gene_id "TVP23C--CDRT4^TVP23C^ENSG00000175106.17" ; gene_name TVP23C ; gene_type protein_coding ; havana_gene "OTTHUMG00000171461.10" ; havana_transcript "OTTHUMT00000130705.3" ; hgnc_id "HGNC:30453" ; level 2 ; orig_coord_info "chr17,15563437,15563448,-" ; protein_id "ENSP00000225576.3" ; tag basic CCDS ; transcript_id "TVP23C--CDRT4^ENST00000225576.7" ; transcript_name "TVP23C-201" ; transcript_support_level 1 ; transcript_type protein_coding
TVP23C--CDRT4 HAVANA mRNA 1052 15760 . + . FI_gene_label "TVP23C^ENSG00000175106.17" ; ID "TVP23C--CDRT4^ENST00000225576.7" ; Parent "TVP23C--CDRT4^TVP23C^ENSG00000175106.17" ; ccdsid "CCDS11170.1" ; exon_id "ENSE00001105678.2" ; exon_number 1 ; gene_id "TVP23C--CDRT4^TVP23C^ENSG00000175106.17" ; gene_name TVP23C ; gene_type protein_coding ; havana_gene "OTTHUMG00000171461.10" ; havana_transcript "OTTHUMT00000130705.3" ; hgnc_id "HGNC:30453" ; level 2 ; orig_coord_info "chr17,15563437,15563448,-" ; protein_id "ENSP00000225576.3" ; tag basic CCDS ; transcript_id "TVP23C--CDRT4^ENST00000225576.7" ; transcript_name "TVP23C-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
TVP23C--CDRT4 HAVANA gene 19889 25887 . + . FI_gene_label "CDRT4^ENSG00000239704.11" ; ID "TVP23C--CDRT4^CDRT4^ENSG00000239704.11" ; ccdsid "CCDS73995.1" ; exon_id "ENSE00003735347.1" ; exon_number 3 ; gene_id "TVP23C--CDRT4^CDRT4^ENSG00000239704.11" ; gene_name CDRT4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000059070.14" ; havana_transcript "OTTHUMT00000130383.9" ; hgnc_id "HGNC:14383" ; level 2 ; orig_coord_info "chr17,15440208,15440238,-" ; protein_id "ENSP00000482523.1" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "TVP23C--CDRT4^ENST00000619038.5" ; transcript_name "CDRT4-204" ; transcript_support_level 1 ; transcript_type protein_coding
TVP23C--CDRT4 HAVANA mRNA 19889 25887 . + . FI_gene_label "CDRT4^ENSG00000239704.11" ; ID "TVP23C--CDRT4^ENST00000619038.5" ; Parent "TVP23C--CDRT4^CDRT4^ENSG00000239704.11" ; ccdsid "CCDS73995.1" ; exon_id "ENSE00003735347.1" ; exon_number 3 ; gene_id "TVP23C--CDRT4^CDRT4^ENSG00000239704.11" ; gene_name CDRT4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000059070.14" ; havana_transcript "OTTHUMT00000130383.9" ; hgnc_id "HGNC:14383" ; level 2 ; orig_coord_info "chr17,15440208,15440238,-" ; protein_id "ENSP00000482523.1" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "TVP23C--CDRT4^ENST00000619038.5" ; transcript_name "CDRT4-204" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
U2AF2--ZNF627 HAVANA gene 1890 12175 . + . FI_gene_label "U2AF2^ENSG00000063244.13" ; ID "U2AF2--ZNF627^U2AF2^ENSG00000063244.13" ; ccdsid "CCDS12933.1" ; exon_id "ENSE00002748119.2" ; exon_number 1 ; gene_id "U2AF2--ZNF627^U2AF2^ENSG00000063244.13" ; gene_name U2AF2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000180908.4" ; havana_transcript "OTTHUMT00000453599.1" ; hgnc_id "HGNC:23156" ; level 2 ; orig_coord_info "chr19,55655105,55655153,+" ; protein_id "ENSP00000307863.3" ; tag basic MANE_Select appris_alternative_1 CCDS ; transcript_id "U2AF2--ZNF627^ENST00000308924.9" ; transcript_name "U2AF2-201" ; transcript_support_level 1 ; transcript_type protein_coding
U2AF2--ZNF627 HAVANA mRNA 1890 12175 . + . FI_gene_label "U2AF2^ENSG00000063244.13" ; ID "U2AF2--ZNF627^ENST00000308924.9" ; Parent "U2AF2--ZNF627^U2AF2^ENSG00000063244.13" ; ccdsid "CCDS12933.1" ; exon_id "ENSE00002748119.2" ; exon_number 1 ; gene_id "U2AF2--ZNF627^U2AF2^ENSG00000063244.13" ; gene_name U2AF2 ; gene_type protein_coding ; havana_gene "OTTHUMG00000180908.4" ; havana_transcript "OTTHUMT00000453599.1" ; hgnc_id "HGNC:23156" ; level 2 ; orig_coord_info "chr19,55655105,55655153,+" ; protein_id "ENSP00000307863.3" ; tag basic MANE_Select appris_alternative_1 CCDS ; transcript_id "U2AF2--ZNF627^ENST00000308924.9" ; transcript_name "U2AF2-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
U2AF2--ZNF627 HAVANA gene 20289 26419 . + . FI_gene_label "ZNF627^ENSG00000198551.10" ; ID "U2AF2--ZNF627^ZNF627^ENSG00000198551.10" ; ccdsid "CCDS42502.1" ; exon_id "ENSE00002772877.1" ; exon_number 1 ; gene_id "U2AF2--ZNF627^ZNF627^ENSG00000198551.10" ; gene_name ZNF627 ; gene_type protein_coding ; havana_gene "OTTHUMG00000182035.3" ; havana_transcript "OTTHUMT00000458875.2" ; hgnc_id "HGNC:30570" ; level 2 ; orig_coord_info "chr19,11597628,11597630,+" ; protein_id "ENSP00000354414.4" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "U2AF2--ZNF627^ENST00000361113.10" ; transcript_name "ZNF627-201" ; transcript_support_level 1 ; transcript_type protein_coding
U2AF2--ZNF627 HAVANA mRNA 20289 26419 . + . FI_gene_label "ZNF627^ENSG00000198551.10" ; ID "U2AF2--ZNF627^ENST00000361113.10" ; Parent "U2AF2--ZNF627^ZNF627^ENSG00000198551.10" ; ccdsid "CCDS42502.1" ; exon_id "ENSE00002772877.1" ; exon_number 1 ; gene_id "U2AF2--ZNF627^ZNF627^ENSG00000198551.10" ; gene_name ZNF627 ; gene_type protein_coding ; havana_gene "OTTHUMG00000182035.3" ; havana_transcript "OTTHUMT00000458875.2" ; hgnc_id "HGNC:30570" ; level 2 ; orig_coord_info "chr19,11597628,11597630,+" ; protein_id "ENSP00000354414.4" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "U2AF2--ZNF627^ENST00000361113.10" ; transcript_name "ZNF627-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
VAMP3--PIK3CD HAVANA gene 1001 7775 . + . FI_gene_label "VAMP3^ENSG00000049245.13" ; ID "VAMP3--PIK3CD^VAMP3^ENSG00000049245.13" ; ccdsid "CCDS88.1" ; exon_id "ENSE00001474297.2" ; exon_number 1 ; gene_id "VAMP3--PIK3CD^VAMP3^ENSG00000049245.13" ; gene_name VAMP3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000001225.4" ; havana_transcript "OTTHUMT00000003625.2" ; hgnc_id "HGNC:12644" ; level 2 ; orig_coord_info "chr1,7771384,7771385,+" ; protein_id "ENSP00000054666.6" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "VAMP3--PIK3CD^ENST00000054666.11" ; transcript_name "VAMP3-201" ; transcript_support_level 1 ; transcript_type protein_coding
VAMP3--PIK3CD HAVANA mRNA 1001 7775 . + . FI_gene_label "VAMP3^ENSG00000049245.13" ; ID "VAMP3--PIK3CD^ENST00000054666.11" ; Parent "VAMP3--PIK3CD^VAMP3^ENSG00000049245.13" ; ccdsid "CCDS88.1" ; exon_id "ENSE00001474297.2" ; exon_number 1 ; gene_id "VAMP3--PIK3CD^VAMP3^ENSG00000049245.13" ; gene_name VAMP3 ; gene_type protein_coding ; havana_gene "OTTHUMG00000001225.4" ; havana_transcript "OTTHUMT00000003625.2" ; hgnc_id "HGNC:12644" ; level 2 ; orig_coord_info "chr1,7771384,7771385,+" ; protein_id "ENSP00000054666.6" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "VAMP3--PIK3CD^ENST00000054666.11" ; transcript_name "VAMP3-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
VAMP3--PIK3CD HAVANA gene 14466 26512 . + . FI_gene_label "PIK3CD^ENSG00000171608.16" ; ID "VAMP3--PIK3CD^PIK3CD^ENSG00000171608.16" ; exon_id "ENSE00002860381.1" ; exon_number 2 ; gene_id "VAMP3--PIK3CD^PIK3CD^ENSG00000171608.16" ; gene_name PIK3CD ; gene_type protein_coding ; havana_gene "OTTHUMG00000001450.3" ; havana_transcript "OTTHUMT00000004237.1" ; hgnc_id "HGNC:8977" ; level 2 ; orig_coord_info "chr1,9710456,9710596,+" ; protein_id "ENSP00000354410.2" ; tag basic ; transcript_id "VAMP3--PIK3CD^ENST00000361110.6" ; transcript_name "PIK3CD-201" ; transcript_support_level 1 ; transcript_type protein_coding
VAMP3--PIK3CD HAVANA mRNA 14466 26512 . + . FI_gene_label "PIK3CD^ENSG00000171608.16" ; ID "VAMP3--PIK3CD^ENST00000361110.6" ; Parent "VAMP3--PIK3CD^PIK3CD^ENSG00000171608.16" ; exon_id "ENSE00002860381.1" ; exon_number 2 ; gene_id "VAMP3--PIK3CD^PIK3CD^ENSG00000171608.16" ; gene_name PIK3CD ; gene_type protein_coding ; havana_gene "OTTHUMG00000001450.3" ; havana_transcript "OTTHUMT00000004237.1" ; hgnc_id "HGNC:8977" ; level 2 ; orig_coord_info "chr1,9710456,9710596,+" ; protein_id "ENSP00000354410.2" ; tag basic ; transcript_id "VAMP3--PIK3CD^ENST00000361110.6" ; transcript_name "PIK3CD-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
ZNF33B--WDFY4 HAVANA gene 19044 91575 . + . FI_gene_label "WDFY4^ENSG00000128815.19" ; ID "ZNF33B--WDFY4^WDFY4^ENSG00000128815.19" ; ccdsid "CCDS44385.1" ; exon_id "ENSE00001228474.3" ; exon_number 2 ; gene_id "ZNF33B--WDFY4^WDFY4^ENSG00000128815.19" ; gene_name WDFY4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000018180.6" ; havana_transcript "OTTHUMT00000047957.4" ; hgnc_id "HGNC:29323" ; level 2 ; orig_coord_info "chr10,48709733,48709966,+" ; protein_id "ENSP00000320563.5" ; tag inferred_exon_combination basic appris_principal_1 CCDS ; transcript_id "ZNF33B--WDFY4^ENST00000325239.11" ; transcript_name "WDFY4-201" ; transcript_support_level 5 ; transcript_type protein_coding
ZNF33B--WDFY4 HAVANA mRNA 19044 91575 . + . FI_gene_label "WDFY4^ENSG00000128815.19" ; ID "ZNF33B--WDFY4^ENST00000325239.11" ; Parent "ZNF33B--WDFY4^WDFY4^ENSG00000128815.19" ; ccdsid "CCDS44385.1" ; exon_id "ENSE00001228474.3" ; exon_number 2 ; gene_id "ZNF33B--WDFY4^WDFY4^ENSG00000128815.19" ; gene_name WDFY4 ; gene_type protein_coding ; havana_gene "OTTHUMG00000018180.6" ; havana_transcript "OTTHUMT00000047957.4" ; hgnc_id "HGNC:29323" ; level 2 ; orig_coord_info "chr10,48709733,48709966,+" ; protein_id "ENSP00000320563.5" ; tag inferred_exon_combination basic appris_principal_1 CCDS ; transcript_id "ZNF33B--WDFY4^ENST00000325239.11" ; transcript_name "WDFY4-201" ; transcript_support_level 5 ; transcript_type protein_coding
L1 and L2 created:
ZNF33B--WDFY4 HAVANA gene 1001 12017 . + . FI_gene_label "ZNF33B^ENSG00000196693.15" ; ID "ZNF33B--WDFY4^ZNF33B^ENSG00000196693.15" ; ccdsid "CCDS7198.1" ; exon_id "ENSE00003630553.1" ; exon_number 2 ; gene_id "ZNF33B--WDFY4^ZNF33B^ENSG00000196693.15" ; gene_name ZNF33B ; gene_type protein_coding ; havana_gene "OTTHUMG00000018014.3" ; havana_transcript "OTTHUMT00000475037.2" ; hgnc_id "HGNC:13097" ; level 2 ; orig_coord_info "chr10,42636920,42636928,-" ; protein_id "ENSP00000352444.2" ; tag basic MANE_Select appris_principal_2 CCDS ; transcript_id "ZNF33B--WDFY4^ENST00000359467.8" ; transcript_name "ZNF33B-201" ; transcript_support_level 1 ; transcript_type protein_coding
ZNF33B--WDFY4 HAVANA mRNA 1001 12017 . + . FI_gene_label "ZNF33B^ENSG00000196693.15" ; ID "ZNF33B--WDFY4^ENST00000359467.8" ; Parent "ZNF33B--WDFY4^ZNF33B^ENSG00000196693.15" ; ccdsid "CCDS7198.1" ; exon_id "ENSE00003630553.1" ; exon_number 2 ; gene_id "ZNF33B--WDFY4^ZNF33B^ENSG00000196693.15" ; gene_name ZNF33B ; gene_type protein_coding ; havana_gene "OTTHUMG00000018014.3" ; havana_transcript "OTTHUMT00000475037.2" ; hgnc_id "HGNC:13097" ; level 2 ; orig_coord_info "chr10,42636920,42636928,-" ; protein_id "ENSP00000352444.2" ; tag basic MANE_Select appris_principal_2 CCDS ; transcript_id "ZNF33B--WDFY4^ENST00000359467.8" ; transcript_name "ZNF33B-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
ZNF627--ZNF385C HAVANA gene 6114 12244 . + . FI_gene_label "ZNF627^ENSG00000198551.10" ; ID "ZNF627--ZNF385C^ZNF627^ENSG00000198551.10" ; ccdsid "CCDS42502.1" ; exon_id "ENSE00002772877.1" ; exon_number 1 ; gene_id "ZNF627--ZNF385C^ZNF627^ENSG00000198551.10" ; gene_name ZNF627 ; gene_type protein_coding ; havana_gene "OTTHUMG00000182035.3" ; havana_transcript "OTTHUMT00000458875.2" ; hgnc_id "HGNC:30570" ; level 2 ; orig_coord_info "chr19,11597628,11597630,+" ; protein_id "ENSP00000354414.4" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "ZNF627--ZNF385C^ENST00000361113.10" ; transcript_name "ZNF627-201" ; transcript_support_level 1 ; transcript_type protein_coding
ZNF627--ZNF385C HAVANA mRNA 6114 12244 . + . FI_gene_label "ZNF627^ENSG00000198551.10" ; ID "ZNF627--ZNF385C^ENST00000361113.10" ; Parent "ZNF627--ZNF385C^ZNF627^ENSG00000198551.10" ; ccdsid "CCDS42502.1" ; exon_id "ENSE00002772877.1" ; exon_number 1 ; gene_id "ZNF627--ZNF385C^ZNF627^ENSG00000198551.10" ; gene_name ZNF627 ; gene_type protein_coding ; havana_gene "OTTHUMG00000182035.3" ; havana_transcript "OTTHUMT00000458875.2" ; hgnc_id "HGNC:30570" ; level 2 ; orig_coord_info "chr19,11597628,11597630,+" ; protein_id "ENSP00000354414.4" ; tag basic MANE_Select appris_principal_1 CCDS ; transcript_id "ZNF627--ZNF385C^ENST00000361113.10" ; transcript_name "ZNF627-201" ; transcript_support_level 1 ; transcript_type protein_coding
L1 and L2 created:
ZNF627--ZNF385C HAVANA gene 15245 26146 . + . FI_gene_label "ZNF385C^ENSG00000187595.16" ; ID "ZNF627--ZNF385C^ZNF385C^ENSG00000187595.16" ; exon_id "ENSE00001799825.4" ; exon_number 2 ; gene_id "ZNF627--ZNF385C^ZNF385C^ENSG00000187595.16" ; gene_name ZNF385C ; gene_type protein_coding ; havana_gene "OTTHUMG00000132073.7" ; havana_transcript "OTTHUMT00000347740.6" ; hgnc_id "HGNC:33722" ; level 1 ; orig_coord_info "chr17,42062807,42063056,-" ; protein_id "ENSP00000411514.4" ; tag not_organism_supported basic appris_principal_1 exp_conf ; transcript_id "ZNF627--ZNF385C^ENST00000436535.4" ; transcript_name "ZNF385C-201" ; transcript_support_level 5 ; transcript_type protein_coding
ZNF627--ZNF385C HAVANA mRNA 15245 26146 . + . FI_gene_label "ZNF385C^ENSG00000187595.16" ; ID "ZNF627--ZNF385C^ENST00000436535.4" ; Parent "ZNF627--ZNF385C^ZNF385C^ENSG00000187595.16" ; exon_id "ENSE00001799825.4" ; exon_number 2 ; gene_id "ZNF627--ZNF385C^ZNF385C^ENSG00000187595.16" ; gene_name ZNF385C ; gene_type protein_coding ; havana_gene "OTTHUMG00000132073.7" ; havana_transcript "OTTHUMT00000347740.6" ; hgnc_id "HGNC:33722" ; level 1 ; orig_coord_info "chr17,42062807,42063056,-" ; protein_id "ENSP00000411514.4" ; tag not_organism_supported basic appris_principal_1 exp_conf ; transcript_id "ZNF627--ZNF385C^ENST00000436535.4" ; transcript_name "ZNF385C-201" ; transcript_support_level 5 ; transcript_type protein_coding
L1 and L2 created:
ZSWIM6--PDE4D HAVANA gene 1001 18415 . + . FI_gene_label "ZSWIM6^ENSG00000130449.6" ; ID "ZSWIM6--PDE4D^ZSWIM6^ENSG00000130449.6" ; ccdsid "CCDS47215.1" ; exon_id "ENSE00001593860.2" ; exon_number 1 ; gene_id "ZSWIM6--PDE4D^ZSWIM6^ENSG00000130449.6" ; gene_name ZSWIM6 ; gene_type protein_coding ; havana_gene "OTTHUMG00000162388.2" ; havana_transcript "OTTHUMT00000368710.2" ; hgnc_id "HGNC:29316" ; level 1 ; orig_coord_info "chr5,61332273,61332948,+" ; protein_id "ENSP00000252744.5" ; tag not_organism_supported basic MANE_Select appris_principal_1 exp_conf CCDS ; transcript_id "ZSWIM6--PDE4D^ENST00000252744.6" ; transcript_name "ZSWIM6-201" ; transcript_support_level 5 ; transcript_type protein_coding
ZSWIM6--PDE4D HAVANA mRNA 1001 18415 . + . FI_gene_label "ZSWIM6^ENSG00000130449.6" ; ID "ZSWIM6--PDE4D^ENST00000252744.6" ; Parent "ZSWIM6--PDE4D^ZSWIM6^ENSG00000130449.6" ; ccdsid "CCDS47215.1" ; exon_id "ENSE00001593860.2" ; exon_number 1 ; gene_id "ZSWIM6--PDE4D^ZSWIM6^ENSG00000130449.6" ; gene_name ZSWIM6 ; gene_type protein_coding ; havana_gene "OTTHUMG00000162388.2" ; havana_transcript "OTTHUMT00000368710.2" ; hgnc_id "HGNC:29316" ; level 1 ; orig_coord_info "chr5,61332273,61332948,+" ; protein_id "ENSP00000252744.5" ; tag not_organism_supported basic MANE_Select appris_principal_1 exp_conf CCDS ; transcript_id "ZSWIM6--PDE4D^ENST00000252744.6" ; transcript_name "ZSWIM6-201" ; transcript_support_level 5 ; transcript_type protein_coding
L1 and L2 created:
ZSWIM6--PDE4D HAVANA gene 39742 72617 . + . FI_gene_label "PDE4D^ENSG00000113448.19" ; ID "ZSWIM6--PDE4D^PDE4D^ENSG00000113448.19" ; exon_id "ENSE00001558796.1" ; exon_number 1 ; gene_id "ZSWIM6--PDE4D^PDE4D^ENSG00000113448.19" ; gene_name PDE4D ; gene_type protein_coding ; havana_gene "OTTHUMG00000162218.9" ; havana_transcript "OTTHUMT00000368104.1" ; hgnc_id "HGNC:8783" ; level 2 ; orig_coord_info "chr5,59768247,59768509,-" ; protein_id "ENSP00000308485.6" ; transcript_id "ZSWIM6--PDE4D^ENST00000309641.10" ; transcript_name "PDE4D-201" ; transcript_support_level 1 ; transcript_type nonsense_mediated_decay
ZSWIM6--PDE4D HAVANA mRNA 39742 72617 . + . FI_gene_label "PDE4D^ENSG00000113448.19" ; ID "ZSWIM6--PDE4D^ENST00000309641.10" ; Parent "ZSWIM6--PDE4D^PDE4D^ENSG00000113448.19" ; exon_id "ENSE00001558796.1" ; exon_number 1 ; gene_id "ZSWIM6--PDE4D^PDE4D^ENSG00000113448.19" ; gene_name PDE4D ; gene_type protein_coding ; havana_gene "OTTHUMG00000162218.9" ; havana_transcript "OTTHUMT00000368104.1" ; hgnc_id "HGNC:8783" ; level 2 ; orig_coord_info "chr5,59768247,59768509,-" ; protein_id "ENSP00000308485.6" ; transcript_id "ZSWIM6--PDE4D^ENST00000309641.10" ; transcript_name "PDE4D-201" ; transcript_support_level 1 ; transcript_type nonsense_mediated_decay
L1 and L2 created:
AC008735.2--AHI1 HAVANA gene 1006 2550 . + . FI_gene_label "AC008735.2^ENSG00000267523.1" ; ID "AC008735.2--AHI1^AC008735.2^ENSG00000267523.1" ; exon_id "ENSE00002846671.1" ; exon_number 1 ; gene_id "AC008735.2--AHI1^AC008735.2^ENSG00000267523.1" ; gene_name "AC008735.2" ; gene_type lncRNA ; havana_gene "OTTHUMG00000180909.1" ; havana_transcript "OTTHUMT00000453608.1" ; level 2 ; orig_coord_info "chr19,55674649,55674710,-" ; transcript_id "AC008735.2--AHI1^ENST00000585940.1" ; transcript_name "AC008735.2-202" ; transcript_support_level 5 ; transcript_type lncRNA
AC008735.2--AHI1 HAVANA RNA 1006 2550 . + . FI_gene_label "AC008735.2^ENSG00000267523.1" ; ID "AC008735.2--AHI1^ENST00000585940.1" ; Parent "AC008735.2--AHI1^AC008735.2^ENSG00000267523.1" ; exon_id "ENSE00002846671.1" ; exon_number 1 ; gene_id "AC008735.2--AHI1^AC008735.2^ENSG00000267523.1" ; gene_name "AC008735.2" ; gene_type lncRNA ; havana_gene "OTTHUMG00000180909.1" ; havana_transcript "OTTHUMT00000453608.1" ; level 2 ; orig_coord_info "chr19,55674649,55674710,-" ; transcript_id "AC008735.2--AHI1^ENST00000585940.1" ; transcript_name "AC008735.2-202" ; transcript_support_level 5 ; transcript_type lncRNA
L1 and L2 created:
AC015911.9--SLFN12L HAVANA gene 1001 1691 . + . FI_gene_label "AC015911.9^ENSG00000286030.2" ; ID "AC015911.9--SLFN12L^AC015911.9^ENSG00000286030.2" ; exon_id "ENSE00003850003.2" ; exon_number 1 ; gene_id "AC015911.9--SLFN12L^AC015911.9^ENSG00000286030.2" ; gene_name "AC015911.9" ; gene_type transcribed_unprocessed_pseudogene ; havana_gene "OTTHUMG00000193507.2" ; havana_transcript "OTTHUMT00000502481.2" ; level 2 ; ont "PGO:0000005" "PGO:0000019" ; orig_coord_info "chr17,35522279,35522969,-" ; tag basic ; transcript_id "AC015911.9--SLFN12L^ENST00000650652.2" ; transcript_name "AC015911.9-201" ; transcript_type transcribed_unprocessed_pseudogene
AC015911.9--SLFN12L HAVANA RNA 1001 1691 . + . FI_gene_label "AC015911.9^ENSG00000286030.2" ; ID "AC015911.9--SLFN12L^ENST00000650652.2" ; Parent "AC015911.9--SLFN12L^AC015911.9^ENSG00000286030.2" ; exon_id "ENSE00003850003.2" ; exon_number 1 ; gene_id "AC015911.9--SLFN12L^AC015911.9^ENSG00000286030.2" ; gene_name "AC015911.9" ; gene_type transcribed_unprocessed_pseudogene ; havana_gene "OTTHUMG00000193507.2" ; havana_transcript "OTTHUMT00000502481.2" ; level 2 ; ont "PGO:0000005" "PGO:0000019" ; orig_coord_info "chr17,35522279,35522969,-" ; tag basic ; transcript_id "AC015911.9--SLFN12L^ENST00000650652.2" ; transcript_name "AC015911.9-201" ; transcript_type transcribed_unprocessed_pseudogene
L1 and L2 created:
AC015911.9--SLFN12L ENSEMBL gene 5824 9825 . + . FI_gene_label "SLFN12L^ENSG00000286065.2" ; ID "AC015911.9--SLFN12L^SLFN12L^ENSG00000286065.2" ; exon_id "ENSE00003899764.1" ; exon_number 1 ; gene_id "AC015911.9--SLFN12L^SLFN12L^ENSG00000286065.2" ; gene_name SLFN12L ; gene_type lncRNA ; havana_gene "OTTHUMG00000167707.2" ; hgnc_id "HGNC:33920" ; level 3 ; orig_coord_info "chr17,35480502,35480513,-" ; transcript_id "AC015911.9--SLFN12L^ENST00000675965.1" ; transcript_name "SLFN12L-206" ; transcript_type lncRNA
AC015911.9--SLFN12L ENSEMBL RNA 5824 9825 . + . FI_gene_label "SLFN12L^ENSG00000286065.2" ; ID "AC015911.9--SLFN12L^ENST00000675965.1" ; Parent "AC015911.9--SLFN12L^SLFN12L^ENSG00000286065.2" ; exon_id "ENSE00003899764.1" ; exon_number 1 ; gene_id "AC015911.9--SLFN12L^SLFN12L^ENSG00000286065.2" ; gene_name SLFN12L ; gene_type lncRNA ; havana_gene "OTTHUMG00000167707.2" ; hgnc_id "HGNC:33920" ; level 3 ; orig_coord_info "chr17,35480502,35480513,-" ; transcript_id "AC015911.9--SLFN12L^ENST00000675965.1" ; transcript_name "SLFN12L-206" ; transcript_type lncRNA
L1 and L2 created:
AC092807.3--DDAH1 HAVANA gene 1101 8302 . + . FI_gene_label "AC092807.3^ENSG00000282057.1" ; ID "AC092807.3--DDAH1^AC092807.3^ENSG00000282057.1" ; exon_id "ENSE00001891111.1" ; exon_number 1 ; gene_id "AC092807.3--DDAH1^AC092807.3^ENSG00000282057.1" ; gene_name "AC092807.3" ; gene_type lncRNA ; havana_gene "OTTHUMG00000010578.6" ; havana_transcript "OTTHUMT00000029193.2" ; level 2 ; orig_coord_info "chr1,85577984,85578150,-" ; tag basic ; transcript_id "AC092807.3--DDAH1^ENST00000467530.5" ; transcript_name "AC092807.3-203" ; transcript_support_level 2 ; transcript_type lncRNA
AC092807.3--DDAH1 HAVANA RNA 1101 8302 . + . FI_gene_label "AC092807.3^ENSG00000282057.1" ; ID "AC092807.3--DDAH1^ENST00000467530.5" ; Parent "AC092807.3--DDAH1^AC092807.3^ENSG00000282057.1" ; exon_id "ENSE00001891111.1" ; exon_number 1 ; gene_id "AC092807.3--DDAH1^AC092807.3^ENSG00000282057.1" ; gene_name "AC092807.3" ; gene_type lncRNA ; havana_gene "OTTHUMG00000010578.6" ; havana_transcript "OTTHUMT00000029193.2" ; level 2 ; orig_coord_info "chr1,85577984,85578150,-" ; tag basic ; transcript_id "AC092807.3--DDAH1^ENST00000467530.5" ; transcript_name "AC092807.3-203" ; transcript_support_level 2 ; transcript_type lncRNA
L1 and L2 created:
ACOXL--AL445669.1 HAVANA gene 34639 35059 . + . FI_gene_label "AL445669.1^ENSG00000236180.2" ; ID "ACOXL--AL445669.1^AL445669.1^ENSG00000236180.2" ; exon_id "ENSE00001805485.2" ; exon_number 1 ; gene_id "ACOXL--AL445669.1^AL445669.1^ENSG00000236180.2" ; gene_name "AL445669.1" ; gene_type processed_pseudogene ; havana_gene "OTTHUMG00000007521.2" ; havana_transcript "OTTHUMT00000019784.2" ; level 1 ; ont "PGO:0000004" ; orig_coord_info "chr1,42570970,42571390,+" ; tag pseudo_consens basic ; transcript_id "ACOXL--AL445669.1^ENST00000454425.2" ; transcript_name "AL445669.1-201" ; transcript_support_level NA ; transcript_type processed_pseudogene
ACOXL--AL445669.1 HAVANA RNA 34639 35059 . + . FI_gene_label "AL445669.1^ENSG00000236180.2" ; ID "ACOXL--AL445669.1^ENST00000454425.2" ; Parent "ACOXL--AL445669.1^AL445669.1^ENSG00000236180.2" ; exon_id "ENSE00001805485.2" ; exon_number 1 ; gene_id "ACOXL--AL445669.1^AL445669.1^ENSG00000236180.2" ; gene_name "AL445669.1" ; gene_type processed_pseudogene ; havana_gene "OTTHUMG00000007521.2" ; havana_transcript "OTTHUMT00000019784.2" ; level 1 ; ont "PGO:0000004" ; orig_coord_info "chr1,42570970,42571390,+" ; tag pseudo_consens basic ; transcript_id "ACOXL--AL445669.1^ENST00000454425.2" ; transcript_name "AL445669.1-201" ; transcript_support_level NA ; transcript_type processed_pseudogene
L1 and L2 created:
ACSL1--LINC02363 HAVANA gene 29290 36005 . + . FI_gene_label "LINC02363^ENSG00000180712.4" ; ID "ACSL1--LINC02363^LINC02363^ENSG00000180712.4" ; exon_id "ENSE00001218198.3" ; exon_number 1 ; gene_id "ACSL1--LINC02363^LINC02363^ENSG00000180712.4" ; gene_name LINC02363 ; gene_type lncRNA ; havana_gene "OTTHUMG00000160616.3" ; havana_transcript "OTTHUMT00000361426.1" ; hgnc_id "HGNC:53286" ; level 2 ; orig_coord_info "chr4,184353313,184353977,-" ; tag basic ; transcript_id "ACSL1--LINC02363^ENST00000317596.3" ; transcript_name "LINC02363-201" ; transcript_support_level 2 ; transcript_type lncRNA
ACSL1--LINC02363 HAVANA RNA 29290 36005 . + . FI_gene_label "LINC02363^ENSG00000180712.4" ; ID "ACSL1--LINC02363^ENST00000317596.3" ; Parent "ACSL1--LINC02363^LINC02363^ENSG00000180712.4" ; exon_id "ENSE00001218198.3" ; exon_number 1 ; gene_id "ACSL1--LINC02363^LINC02363^ENSG00000180712.4" ; gene_name LINC02363 ; gene_type lncRNA ; havana_gene "OTTHUMG00000160616.3" ; havana_transcript "OTTHUMT00000361426.1" ; hgnc_id "HGNC:53286" ; level 2 ; orig_coord_info "chr4,184353313,184353977,-" ; tag basic ; transcript_id "ACSL1--LINC02363^ENST00000317596.3" ; transcript_name "LINC02363-201" ; transcript_support_level 2 ; transcript_type lncRNA
L1 and L2 created:
ACSL1--MYL12BP2 HAVANA gene 29290 29801 . + . FI_gene_label "MYL12BP2^ENSG00000227765.4" ; ID "ACSL1--MYL12BP2^MYL12BP2^ENSG00000227765.4" ; exon_id "ENSE00002026914.1" ; exon_number 1 ; gene_id "ACSL1--MYL12BP2^MYL12BP2^ENSG00000227765.4" ; gene_name MYL12BP2 ; gene_type processed_pseudogene ; havana_gene "OTTHUMG00000160610.1" ; havana_transcript "OTTHUMT00000361415.1" ; hgnc_id "HGNC:51650" ; level 1 ; ont "PGO:0000004" ; orig_coord_info "chr4,184299129,184299640,-" ; tag pseudo_consens basic ; transcript_id "ACSL1--MYL12BP2^ENST00000503948.1" ; transcript_name "MYL12BP2-201" ; transcript_support_level NA ; transcript_type processed_pseudogene
ACSL1--MYL12BP2 HAVANA RNA 29290 29801 . + . FI_gene_label "MYL12BP2^ENSG00000227765.4" ; ID "ACSL1--MYL12BP2^ENST00000503948.1" ; Parent "ACSL1--MYL12BP2^MYL12BP2^ENSG00000227765.4" ; exon_id "ENSE00002026914.1" ; exon_number 1 ; gene_id "ACSL1--MYL12BP2^MYL12BP2^ENSG00000227765.4" ; gene_name MYL12BP2 ; gene_type processed_pseudogene ; havana_gene "OTTHUMG00000160610.1" ; havana_transcript "OTTHUMT00000361415.1" ; hgnc_id "HGNC:51650" ; level 1 ; ont "PGO:0000004" ; orig_coord_info "chr4,184299129,184299640,-" ; tag pseudo_consens basic ; transcript_id "ACSL1--MYL12BP2^ENST00000503948.1" ; transcript_name "MYL12BP2-201" ; transcript_support_level NA ; transcript_type processed_pseudogene
L1 and L2 created:
FBXO25--AC240565.1 HAVANA gene 26102 34357 . + . FI_gene_label "AC240565.1^ENSG00000280136.2" ; ID "FBXO25--AC240565.1^AC240565.1^ENSG00000280136.2" ; exon_id "ENSE00003756821.1" ; exon_number 1 ; gene_id "FBXO25--AC240565.1^AC240565.1^ENSG00000280136.2" ; gene_name "AC240565.1" ; gene_type lncRNA ; havana_gene "OTTHUMG00000189256.2" ; havana_transcript "OTTHUMT00000479189.2" ; level 2 ; orig_coord_info "chr17,118383,118578,-" ; tag not_best_in_genome_evidence basic ; transcript_id "FBXO25--AC240565.1^ENST00000624936.2" ; transcript_name "AC240565.1-201" ; transcript_support_level 5 ; transcript_type lncRNA
FBXO25--AC240565.1 HAVANA RNA 26102 34357 . + . FI_gene_label "AC240565.1^ENSG00000280136.2" ; ID "FBXO25--AC240565.1^ENST00000624936.2" ; Parent "FBXO25--AC240565.1^AC240565.1^ENSG00000280136.2" ; exon_id "ENSE00003756821.1" ; exon_number 1 ; gene_id "FBXO25--AC240565.1^AC240565.1^ENSG00000280136.2" ; gene_name "AC240565.1" ; gene_type lncRNA ; havana_gene "OTTHUMG00000189256.2" ; havana_transcript "OTTHUMT00000479189.2" ; level 2 ; orig_coord_info "chr17,118383,118578,-" ; tag not_best_in_genome_evidence basic ; transcript_id "FBXO25--AC240565.1^ENST00000624936.2" ; transcript_name "AC240565.1-201" ; transcript_support_level 5 ; transcript_type lncRNA
L1 and L2 created:
GTF2A1L--STON1-GTF2A1L HAVANA gene 14395 15764 . + . FI_gene_label "STON1-GTF2A1L^ENSG00000068781.21" ; ID "GTF2A1L--STON1-GTF2A1L^STON1-GTF2A1L^ENSG00000068781.21" ; exon_id "ENSE00001916353.1" ; exon_number 1 ; gene_id "GTF2A1L--STON1-GTF2A1L^STON1-GTF2A1L^ENSG00000068781.21" ; gene_name "STON1-GTF2A1L" ; gene_type protein_coding ; havana_gene "OTTHUMG00000152037.6" ; havana_transcript "OTTHUMT00000325207.1" ; hgnc_id "HGNC:30651" ; level 1 ; orig_coord_info "chr2,48768954,48769121,+" ; tag exp_conf ; transcript_id "GTF2A1L--STON1-GTF2A1L^ENST00000463040.5" ; transcript_name "STON1-GTF2A1L-205" ; transcript_support_level 5 ; transcript_type processed_transcript
GTF2A1L--STON1-GTF2A1L HAVANA RNA 14395 15764 . + . FI_gene_label "STON1-GTF2A1L^ENSG00000068781.21" ; ID "GTF2A1L--STON1-GTF2A1L^ENST00000463040.5" ; Parent "GTF2A1L--STON1-GTF2A1L^STON1-GTF2A1L^ENSG00000068781.21" ; exon_id "ENSE00001916353.1" ; exon_number 1 ; gene_id "GTF2A1L--STON1-GTF2A1L^STON1-GTF2A1L^ENSG00000068781.21" ; gene_name "STON1-GTF2A1L" ; gene_type protein_coding ; havana_gene "OTTHUMG00000152037.6" ; havana_transcript "OTTHUMT00000325207.1" ; hgnc_id "HGNC:30651" ; level 1 ; orig_coord_info "chr2,48768954,48769121,+" ; tag exp_conf ; transcript_id "GTF2A1L--STON1-GTF2A1L^ENST00000463040.5" ; transcript_name "STON1-GTF2A1L-205" ; transcript_support_level 5 ; transcript_type processed_transcript
L1 and L2 created:
KALRN--AC092266.1 HAVANA gene 93782 93946 . + . FI_gene_label "AC092266.1^ENSG00000275733.1" ; ID "KALRN--AC092266.1^AC092266.1^ENSG00000275733.1" ; exon_id "ENSE00003715886.1" ; exon_number 1 ; gene_id "KALRN--AC092266.1^AC092266.1^ENSG00000275733.1" ; gene_name "AC092266.1" ; gene_type processed_pseudogene ; havana_gene "OTTHUMG00000187564.1" ; havana_transcript "OTTHUMT00000475292.1" ; level 1 ; ont "PGO:0000004" ; orig_coord_info "chr5,2261859,2262023,+" ; tag pseudo_consens basic ; transcript_id "KALRN--AC092266.1^ENST00000610958.1" ; transcript_name "AC092266.1-201" ; transcript_support_level NA ; transcript_type processed_pseudogene
KALRN--AC092266.1 HAVANA RNA 93782 93946 . + . FI_gene_label "AC092266.1^ENSG00000275733.1" ; ID "KALRN--AC092266.1^ENST00000610958.1" ; Parent "KALRN--AC092266.1^AC092266.1^ENSG00000275733.1" ; exon_id "ENSE00003715886.1" ; exon_number 1 ; gene_id "KALRN--AC092266.1^AC092266.1^ENSG00000275733.1" ; gene_name "AC092266.1" ; gene_type processed_pseudogene ; havana_gene "OTTHUMG00000187564.1" ; havana_transcript "OTTHUMT00000475292.1" ; level 1 ; ont "PGO:0000004" ; orig_coord_info "chr5,2261859,2262023,+" ; tag pseudo_consens basic ; transcript_id "KALRN--AC092266.1^ENST00000610958.1" ; transcript_name "AC092266.1-201" ; transcript_support_level NA ; transcript_type processed_pseudogene
L1 and L2 created:
KALRN--LSINCT5 HAVANA gene 93782 96428 . + . FI_gene_label "LSINCT5^ENSG00000281560.1" ; ID "KALRN--LSINCT5^LSINCT5^ENSG00000281560.1" ; exon_id "ENSE00003773368.1" ; exon_number 1 ; gene_id "KALRN--LSINCT5^LSINCT5^ENSG00000281560.1" ; gene_name LSINCT5 ; gene_type lncRNA ; havana_gene "OTTHUMG00000189568.1" ; havana_transcript "OTTHUMT00000479981.1" ; hgnc_id "HGNC:37824" ; level 2 ; orig_coord_info "chr5,2712591,2715237,+" ; tag basic ; transcript_id "KALRN--LSINCT5^ENST00000626215.1" ; transcript_name "LSINCT5-201" ; transcript_support_level NA ; transcript_type lncRNA
KALRN--LSINCT5 HAVANA RNA 93782 96428 . + . FI_gene_label "LSINCT5^ENSG00000281560.1" ; ID "KALRN--LSINCT5^ENST00000626215.1" ; Parent "KALRN--LSINCT5^LSINCT5^ENSG00000281560.1" ; exon_id "ENSE00003773368.1" ; exon_number 1 ; gene_id "KALRN--LSINCT5^LSINCT5^ENSG00000281560.1" ; gene_name LSINCT5 ; gene_type lncRNA ; havana_gene "OTTHUMG00000189568.1" ; havana_transcript "OTTHUMT00000479981.1" ; hgnc_id "HGNC:37824" ; level 2 ; orig_coord_info "chr5,2712591,2715237,+" ; tag basic ; transcript_id "KALRN--LSINCT5^ENST00000626215.1" ; transcript_name "LSINCT5-201" ; transcript_support_level NA ; transcript_type lncRNA
L1 and L2 created:
PIK3R4--AC068633.1 HAVANA gene 32561 37788 . + . FI_gene_label "AC068633.1^ENSG00000243276.6" ; ID "PIK3R4--AC068633.1^AC068633.1^ENSG00000243276.6" ; exon_id "ENSE00003854987.1" ; exon_number 1 ; gene_id "PIK3R4--AC068633.1^AC068633.1^ENSG00000243276.6" ; gene_name "AC068633.1" ; gene_type lncRNA ; havana_gene "OTTHUMG00000159346.7" ; havana_transcript "OTTHUMT00000356191.2" ; level 2 ; orig_coord_info "chr3,118559059,118559127,-" ; tag basic TAGENE ; transcript_id "PIK3R4--AC068633.1^ENST00000476460.2" ; transcript_name "AC068633.1-202" ; transcript_support_level 2 ; transcript_type lncRNA
PIK3R4--AC068633.1 HAVANA RNA 32561 37788 . + . FI_gene_label "AC068633.1^ENSG00000243276.6" ; ID "PIK3R4--AC068633.1^ENST00000476460.2" ; Parent "PIK3R4--AC068633.1^AC068633.1^ENSG00000243276.6" ; exon_id "ENSE00003854987.1" ; exon_number 1 ; gene_id "PIK3R4--AC068633.1^AC068633.1^ENSG00000243276.6" ; gene_name "AC068633.1" ; gene_type lncRNA ; havana_gene "OTTHUMG00000159346.7" ; havana_transcript "OTTHUMT00000356191.2" ; level 2 ; orig_coord_info "chr3,118559059,118559127,-" ; tag basic TAGENE ; transcript_id "PIK3R4--AC068633.1^ENST00000476460.2" ; transcript_name "AC068633.1-202" ; transcript_support_level 2 ; transcript_type lncRNA
L1 and L2 created:
POLR2J4--UPK3BL1 HAVANA gene 1001 4422 . + . FI_gene_label "POLR2J4^ENSG00000272655.2" ; ID "POLR2J4--UPK3BL1^POLR2J4^ENSG00000272655.2" ; exon_id "ENSE00001746198.1" ; exon_number 1 ; gene_id "POLR2J4--UPK3BL1^POLR2J4^ENSG00000272655.2" ; gene_name POLR2J4 ; gene_type transcribed_unprocessed_pseudogene ; havana_gene "OTTHUMG00000155253.4" ; havana_transcript "OTTHUMT00000339134.1" ; hgnc_id "HGNC:28195" ; level 2 ; orig_coord_info "chr7,44019061,44019170,-" ; tag basic ; transcript_id "POLR2J4--UPK3BL1^ENST00000326391.6" ; transcript_name "POLR2J4-203" ; transcript_support_level 1 ; transcript_type processed_transcript
POLR2J4--UPK3BL1 HAVANA RNA 1001 4422 . + . FI_gene_label "POLR2J4^ENSG00000272655.2" ; ID "POLR2J4--UPK3BL1^ENST00000326391.6" ; Parent "POLR2J4--UPK3BL1^POLR2J4^ENSG00000272655.2" ; exon_id "ENSE00001746198.1" ; exon_number 1 ; gene_id "POLR2J4--UPK3BL1^POLR2J4^ENSG00000272655.2" ; gene_name POLR2J4 ; gene_type transcribed_unprocessed_pseudogene ; havana_gene "OTTHUMG00000155253.4" ; havana_transcript "OTTHUMT00000339134.1" ; hgnc_id "HGNC:28195" ; level 2 ; orig_coord_info "chr7,44019061,44019170,-" ; tag basic ; transcript_id "POLR2J4--UPK3BL1^ENST00000326391.6" ; transcript_name "POLR2J4-203" ; transcript_support_level 1 ; transcript_type processed_transcript
L1 and L2 created:
RNF144B--PAFAH1B2P1 HAVANA gene 17172 17862 . + . FI_gene_label "PAFAH1B2P1^ENSG00000214111.3" ; ID "RNF144B--PAFAH1B2P1^PAFAH1B2P1^ENSG00000214111.3" ; exon_id "ENSE00001639305.1" ; exon_number 1 ; gene_id "RNF144B--PAFAH1B2P1^PAFAH1B2P1^ENSG00000214111.3" ; gene_name PAFAH1B2P1 ; gene_type processed_pseudogene ; havana_gene "OTTHUMG00000021276.2" ; havana_transcript "OTTHUMT00000056110.1" ; hgnc_id "HGNC:54905" ; level 1 ; ont "PGO:0000004" ; orig_coord_info "chrX,25029545,25030235,+" ; tag pseudo_consens basic ; transcript_id "RNF144B--PAFAH1B2P1^ENST00000438281.1" ; transcript_name "PAFAH1B2P1-201" ; transcript_support_level NA ; transcript_type processed_pseudogene
RNF144B--PAFAH1B2P1 HAVANA RNA 17172 17862 . + . FI_gene_label "PAFAH1B2P1^ENSG00000214111.3" ; ID "RNF144B--PAFAH1B2P1^ENST00000438281.1" ; Parent "RNF144B--PAFAH1B2P1^PAFAH1B2P1^ENSG00000214111.3" ; exon_id "ENSE00001639305.1" ; exon_number 1 ; gene_id "RNF144B--PAFAH1B2P1^PAFAH1B2P1^ENSG00000214111.3" ; gene_name PAFAH1B2P1 ; gene_type processed_pseudogene ; havana_gene "OTTHUMG00000021276.2" ; havana_transcript "OTTHUMT00000056110.1" ; hgnc_id "HGNC:54905" ; level 1 ; ont "PGO:0000004" ; orig_coord_info "chrX,25029545,25030235,+" ; tag pseudo_consens basic ; transcript_id "RNF144B--PAFAH1B2P1^ENST00000438281.1" ; transcript_name "PAFAH1B2P1-201" ; transcript_support_level NA ; transcript_type processed_pseudogene
L1 and L2 created:
RNF144B--RN7SL91P ENSEMBL gene 17172 17462 . + . FI_gene_label "RN7SL91P^ENSG00000240439.3" ; ID "RNF144B--RN7SL91P^RN7SL91P^ENSG00000240439.3" ; exon_id "ENSE00001942361.3" ; exon_number 1 ; gene_id "RNF144B--RN7SL91P^RN7SL91P^ENSG00000240439.3" ; gene_name RN7SL91P ; gene_type misc_RNA ; hgnc_id "HGNC:46107" ; level 3 ; orig_coord_info "chrX,25060649,25060939,-" ; tag basic ; transcript_id "RNF144B--RN7SL91P^ENST00000469313.3" ; transcript_name "RN7SL91P-201" ; transcript_support_level NA ; transcript_type misc_RNA
RNF144B--RN7SL91P ENSEMBL RNA 17172 17462 . + . FI_gene_label "RN7SL91P^ENSG00000240439.3" ; ID "RNF144B--RN7SL91P^ENST00000469313.3" ; Parent "RNF144B--RN7SL91P^RN7SL91P^ENSG00000240439.3" ; exon_id "ENSE00001942361.3" ; exon_number 1 ; gene_id "RNF144B--RN7SL91P^RN7SL91P^ENSG00000240439.3" ; gene_name RN7SL91P ; gene_type misc_RNA ; hgnc_id "HGNC:46107" ; level 3 ; orig_coord_info "chrX,25060649,25060939,-" ; tag basic ; transcript_id "RNF144B--RN7SL91P^ENST00000469313.3" ; transcript_name "RN7SL91P-201" ; transcript_support_level NA ; transcript_type misc_RNA
L1 and L2 created:
SLC12A7--AC092266.1 HAVANA gene 29213 29377 . + . FI_gene_label "AC092266.1^ENSG00000275733.1" ; ID "SLC12A7--AC092266.1^AC092266.1^ENSG00000275733.1" ; exon_id "ENSE00003715886.1" ; exon_number 1 ; gene_id "SLC12A7--AC092266.1^AC092266.1^ENSG00000275733.1" ; gene_name "AC092266.1" ; gene_type processed_pseudogene ; havana_gene "OTTHUMG00000187564.1" ; havana_transcript "OTTHUMT00000475292.1" ; level 1 ; ont "PGO:0000004" ; orig_coord_info "chr5,2261859,2262023,+" ; tag pseudo_consens basic ; transcript_id "SLC12A7--AC092266.1^ENST00000610958.1" ; transcript_name "AC092266.1-201" ; transcript_support_level NA ; transcript_type processed_pseudogene
SLC12A7--AC092266.1 HAVANA RNA 29213 29377 . + . FI_gene_label "AC092266.1^ENSG00000275733.1" ; ID "SLC12A7--AC092266.1^ENST00000610958.1" ; Parent "SLC12A7--AC092266.1^AC092266.1^ENSG00000275733.1" ; exon_id "ENSE00003715886.1" ; exon_number 1 ; gene_id "SLC12A7--AC092266.1^AC092266.1^ENSG00000275733.1" ; gene_name "AC092266.1" ; gene_type processed_pseudogene ; havana_gene "OTTHUMG00000187564.1" ; havana_transcript "OTTHUMT00000475292.1" ; level 1 ; ont "PGO:0000004" ; orig_coord_info "chr5,2261859,2262023,+" ; tag pseudo_consens basic ; transcript_id "SLC12A7--AC092266.1^ENST00000610958.1" ; transcript_name "AC092266.1-201" ; transcript_support_level NA ; transcript_type processed_pseudogene
L1 and L2 created:
SLC12A7--LSINCT5 HAVANA gene 29213 31859 . + . FI_gene_label "LSINCT5^ENSG00000281560.1" ; ID "SLC12A7--LSINCT5^LSINCT5^ENSG00000281560.1" ; exon_id "ENSE00003773368.1" ; exon_number 1 ; gene_id "SLC12A7--LSINCT5^LSINCT5^ENSG00000281560.1" ; gene_name LSINCT5 ; gene_type lncRNA ; havana_gene "OTTHUMG00000189568.1" ; havana_transcript "OTTHUMT00000479981.1" ; hgnc_id "HGNC:37824" ; level 2 ; orig_coord_info "chr5,2712591,2715237,+" ; tag basic ; transcript_id "SLC12A7--LSINCT5^ENST00000626215.1" ; transcript_name "LSINCT5-201" ; transcript_support_level NA ; transcript_type lncRNA
SLC12A7--LSINCT5 HAVANA RNA 29213 31859 . + . FI_gene_label "LSINCT5^ENSG00000281560.1" ; ID "SLC12A7--LSINCT5^ENST00000626215.1" ; Parent "SLC12A7--LSINCT5^LSINCT5^ENSG00000281560.1" ; exon_id "ENSE00003773368.1" ; exon_number 1 ; gene_id "SLC12A7--LSINCT5^LSINCT5^ENSG00000281560.1" ; gene_name LSINCT5 ; gene_type lncRNA ; havana_gene "OTTHUMG00000189568.1" ; havana_transcript "OTTHUMT00000479981.1" ; hgnc_id "HGNC:37824" ; level 2 ; orig_coord_info "chr5,2712591,2715237,+" ; tag basic ; transcript_id "SLC12A7--LSINCT5^ENST00000626215.1" ; transcript_name "LSINCT5-201" ; transcript_support_level NA ; transcript_type lncRNA
L1 and L2 created:
TLK2--AC240565.1 HAVANA gene 40046 48301 . + . FI_gene_label "AC240565.1^ENSG00000280136.2" ; ID "TLK2--AC240565.1^AC240565.1^ENSG00000280136.2" ; exon_id "ENSE00003756821.1" ; exon_number 1 ; gene_id "TLK2--AC240565.1^AC240565.1^ENSG00000280136.2" ; gene_name "AC240565.1" ; gene_type lncRNA ; havana_gene "OTTHUMG00000189256.2" ; havana_transcript "OTTHUMT00000479189.2" ; level 2 ; orig_coord_info "chr17,118383,118578,-" ; tag not_best_in_genome_evidence basic ; transcript_id "TLK2--AC240565.1^ENST00000624936.2" ; transcript_name "AC240565.1-201" ; transcript_support_level 5 ; transcript_type lncRNA
TLK2--AC240565.1 HAVANA RNA 40046 48301 . + . FI_gene_label "AC240565.1^ENSG00000280136.2" ; ID "TLK2--AC240565.1^ENST00000624936.2" ; Parent "TLK2--AC240565.1^AC240565.1^ENSG00000280136.2" ; exon_id "ENSE00003756821.1" ; exon_number 1 ; gene_id "TLK2--AC240565.1^AC240565.1^ENSG00000280136.2" ; gene_name "AC240565.1" ; gene_type lncRNA ; havana_gene "OTTHUMG00000189256.2" ; havana_transcript "OTTHUMT00000479189.2" ; level 2 ; orig_coord_info "chr17,118383,118578,-" ; tag not_best_in_genome_evidence basic ; transcript_id "TLK2--AC240565.1^ENST00000624936.2" ; transcript_name "AC240565.1-201" ; transcript_support_level 5 ; transcript_type lncRNA
L1 and L2 created:
TLK2P1--AC110079.1 HAVANA gene 1001 4192 . + . FI_gene_label "TLK2P1^ENSG00000226049.3" ; ID "TLK2P1--AC110079.1^TLK2P1^ENSG00000226049.3" ; exon_id "ENSE00002174619.1" ; exon_number 1 ; gene_id "TLK2P1--AC110079.1^TLK2P1^ENSG00000226049.3" ; gene_name TLK2P1 ; gene_type processed_pseudogene ; havana_gene "OTTHUMG00000166422.1" ; havana_transcript "OTTHUMT00000389700.1" ; hgnc_id "HGNC:18048" ; level 1 ; ont "PGO:0000004" ; orig_coord_info "chr17,34036681,34039872,-" ; tag pseudo_consens basic ; transcript_id "TLK2P1--AC110079.1^ENST00000530992.1" ; transcript_name "TLK2P1-201" ; transcript_support_level NA ; transcript_type processed_pseudogene
TLK2P1--AC110079.1 HAVANA RNA 1001 4192 . + . FI_gene_label "TLK2P1^ENSG00000226049.3" ; ID "TLK2P1--AC110079.1^ENST00000530992.1" ; Parent "TLK2P1--AC110079.1^TLK2P1^ENSG00000226049.3" ; exon_id "ENSE00002174619.1" ; exon_number 1 ; gene_id "TLK2P1--AC110079.1^TLK2P1^ENSG00000226049.3" ; gene_name TLK2P1 ; gene_type processed_pseudogene ; havana_gene "OTTHUMG00000166422.1" ; havana_transcript "OTTHUMT00000389700.1" ; hgnc_id "HGNC:18048" ; level 1 ; ont "PGO:0000004" ; orig_coord_info "chr17,34036681,34039872,-" ; tag pseudo_consens basic ; transcript_id "TLK2P1--AC110079.1^ENST00000530992.1" ; transcript_name "TLK2P1-201" ; transcript_support_level NA ; transcript_type processed_pseudogene
L1 and L2 created:
TLK2P1--AC110079.1 HAVANA gene 7193 19707 . + . FI_gene_label "AC110079.1^ENSG00000260404.3" ; ID "TLK2P1--AC110079.1^AC110079.1^ENSG00000260404.3" ; exon_id "ENSE00002625896.1" ; exon_number 1 ; gene_id "TLK2P1--AC110079.1^AC110079.1^ENSG00000260404.3" ; gene_name "AC110079.1" ; gene_type transcribed_unprocessed_pseudogene ; havana_gene "OTTHUMG00000161164.4" ; havana_transcript "OTTHUMT00000364170.2" ; level 2 ; orig_coord_info "chr4,118591773,118591895,+" ; tag dotter_confirmed basic ; transcript_id "TLK2P1--AC110079.1^ENST00000567913.2" ; transcript_name "AC110079.1-201" ; transcript_support_level 5 ; transcript_type processed_transcript
TLK2P1--AC110079.1 HAVANA RNA 7193 19707 . + . FI_gene_label "AC110079.1^ENSG00000260404.3" ; ID "TLK2P1--AC110079.1^ENST00000567913.2" ; Parent "TLK2P1--AC110079.1^AC110079.1^ENSG00000260404.3" ; exon_id "ENSE00002625896.1" ; exon_number 1 ; gene_id "TLK2P1--AC110079.1^AC110079.1^ENSG00000260404.3" ; gene_name "AC110079.1" ; gene_type transcribed_unprocessed_pseudogene ; havana_gene "OTTHUMG00000161164.4" ; havana_transcript "OTTHUMT00000364170.2" ; level 2 ; orig_coord_info "chr4,118591773,118591895,+" ; tag dotter_confirmed basic ; transcript_id "TLK2P1--AC110079.1^ENST00000567913.2" ; transcript_name "AC110079.1-201" ; transcript_support_level 5 ; transcript_type processed_transcript
1346 cases fixed where L3 features have parent feature(s) missing
------------------------------ done in 0 seconds -------------------------------
--------------------------- Check5: l1 linked to l2 ----------------------------
No problem found
------------------------------ done in 0 seconds -------------------------------
--------------------------- Check6: remove orphan l1 ---------------------------
We remove only those not supposed to be orphan
None found
------------------------------ done in 0 seconds -------------------------------
------------------------- Check7: all level3 locations -------------------------
------------------------------ done in 0 seconds -------------------------------
------------------------------ Check8: check cds -------------------------------
No problem found
------------------------------ done in 0 seconds -------------------------------
----------------------------- Check9: check exons ------------------------------
No exons created
No exons locations modified
No supernumerary exons removed
No level2 locations modified
------------------------------ done in 1 seconds -------------------------------
----------------------------- Check10: check utrs ------------------------------
2923 UTRs created that were missing
No UTRs locations modified
No supernumerary UTRs removed
------------------------------ done in 0 seconds -------------------------------
------------------------ Check11: all level2 locations -------------------------
No problem found
------------------------------ done in 0 seconds -------------------------------
------------------------ Check12: all level1 locations -------------------------
We fixed 121 wrong level1 location cases
------------------------------ done in 0 seconds -------------------------------
---------------------- Check13: remove identical isoforms ----------------------
None found
------------------------------ done in 0 seconds -------------------------------
------ End checks (done in 1 second) ------
GFF3 file parsed