AIH curated blacklist: matched 15 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 243
Pass (FILTER=PASS): 16 (6.6%)
Fail (FILTER=FAIL): 227 (93.4%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 15
All 15 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 60
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 30
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 29
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 16
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 11
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 10
confidence_below_min(low<high): 9
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 8
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 7
confidence_below_min(medium<high);aih_curated_blacklist: 7
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 7
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 6
confidence_below_min(low<high);total_reads_below_min(7.0<8.0): 5
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 4
total_reads_below_min(3.0<8.0): 3
Breakdown by confidence:
high: 16 pass, 7 fail (total: 23)
low: 0 pass, 97 fail (total: 97)
medium: 0 pass, 123 fail (total: 123)
Arriba filter: 243 rows -> 16 PASS; wrote 659_cVw-T1-TRNA-1_B23MHV2LT4_1.arriba.fusions.filtered.tsv and 659_cVw-T1-TRNA-1_B23MHV2LT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: 659_cVw-T1-TRNA-1_B23MHV2LT4_1.arriba.fusions.filter_summary.txt