Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f0/d5f730dbd040fc31a2cf33d26c431a/659_buD-T1-TRNA-1_B23MHV2LT4_1.star_alignment.Aligned.sortedByCoord.out.cram
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7a/04e0d46261ccd7666815a5d5b067b8/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7a/04e0d46261ccd7666815a5d5b067b8/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.bai: No such file or directory
ls: *.csi: No such file or directory