File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/53/58faf3557bb15c88bbb535a6cda798/.command.log
Size
714 bytes
Attempt
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/80/54a830ef9eff92836d16182416f831/659_On-T1-TRNA-2_B23MHV2LT4_1.features.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/53/58faf3557bb15c88bbb535a6cda798/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/53/58faf3557bb15c88bbb535a6cda798/.command.sh
==> STAGING COMPLETE (3 inputs)

Predicting contamination for 1 sample(s)...
Detection threshold: VAF_p90 < 0.9999
Level estimation: contamination_pct = -215.87 * vaf_p90 + 215.65

  659_On-T1-TRNA-2_B23MHV2LT4_1: vaf_p90=1.000000 -> CLEAN

Output saved to: 659_On-T1-TRNA-2_B23MHV2LT4_1.predictions.csv
Summary: 0/1 samples flagged as contaminated