[W::hts_idx_load3] The index file is older than the data file: 659_b4x-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai
Reading reference bed file:  ref_annot.bed  ...  Done
Load BAM file ...  Done

===================================================================
Total splicing  Events:	50542863
Known Splicing Events:	49967497
Partial Novel Splicing Events:	350462
Novel Splicing Events:	201848
Filtered Splicing Events:	23056

Total splicing  Junctions:	183345
Known Splicing Junctions:	157728
Partial Novel Splicing Junctions:	16066
Novel Splicing Junctions:	9551

===================================================================
Create BED file ...
Create Interact file ...