AIH curated blacklist: matched 9 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 213
Pass (FILTER=PASS): 39 (18.3%)
Fail (FILTER=FAIL): 174 (81.7%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 9
All 9 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 21
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 20
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 16
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 16
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 15
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 13
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 12
confidence_below_min(low<high): 10
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 10
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 7
confidence_below_min(medium<high);aih_curated_blacklist: 5
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 5
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 4
total_reads_below_min(4.0<8.0): 4
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 4
Breakdown by confidence:
high: 39 pass, 9 fail (total: 48)
low: 0 pass, 75 fail (total: 75)
medium: 0 pass, 90 fail (total: 90)
Arriba filter: 213 rows -> 39 PASS; wrote 659_Dl-T1-TRNA-1_B23MHV2LT4_1.arriba.fusions.filtered.tsv and 659_Dl-T1-TRNA-1_B23MHV2LT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: 659_Dl-T1-TRNA-1_B23MHV2LT4_1.arriba.fusions.filter_summary.txt