Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c7/8bc1452933c959c51a4e06982270da/.command.sh Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c7/8bc1452933c959c51a4e06982270da/.command.run Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3b/d28efc9f93fdf055d266107a28d5e4/659_epZ-T1-TRNA-1_B23MHV2LT4_1_1.fastp.fastq.gz Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3b/d28efc9f93fdf055d266107a28d5e4/659_epZ-T1-TRNA-1_B23MHV2LT4_1_2.fastp.fastq.gz Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b6/06fd18017e7b36d58841010eb75b4e/659_epZ-T1-TRNA-1_B23MHV2LT4_1.Chimeric.out.junction ==> STAGING COMPLETE (6 inputs) -ctat genome lib [/tmp/nxf.l3FwjedXTv/ctat_genome_lib_build_dir] validates. CMD: mkdir -p /tmp/nxf.l3FwjedXTv/./_starF_checkpoints CMD: mkdir -p /tmp/nxf.l3FwjedXTv/./star-fusion.preliminary -sample contains 294949394 rnaseq fragments * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.l3FwjedXTv/ctat_genome_lib_build_dir -J /tmp/nxf.l3FwjedXTv/659_epZ-T1-TRNA-1_B23MHV2LT4_1.Chimeric.out.junction -O /tmp/nxf.l3FwjedXTv/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 -parsing fusion evidence: /tmp/nxf.l3FwjedXTv/659_epZ-T1-TRNA-1_B23MHV2LT4_1.Chimeric.out.junction -building interval tree based on /tmp/nxf.l3FwjedXTv/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.08 min). -mapping reads to genes [10000], rate=85714.29/min [20000], rate=85714.29/min [30000], rate=90000.00/min [40000], rate=92307.69/min [50000], rate=93750.00/min [60000], rate=94736.84/min [70000], rate=95454.55/min [80000], rate=96000.00/min [90000], rate=96428.57/min [100000], rate=96774.19/min [110000], rate=98507.46/min [120000], rate=98630.14/min [130000], rate=97500.00/min [140000], rate=100000.00/min [150000], rate=104651.16/min [160000], rate=109090.91/min [170000], rate=107368.42/min [180000], rate=106930.69/min [190000], rate=107547.17/min [200000], rate=107142.86/min [210000], rate=106779.66/min [220000], rate=106451.61/min [230000], rate=97183.10/min [240000], rate=90566.04/min [250000], rate=85714.29/min [260000], rate=82105.26/min [270000], rate=79411.76/min [280000], rate=76712.33/min [290000], rate=74358.97/min [300000], rate=72000.00/min [310000], rate=70454.55/min [320000], rate=68817.20/min [330000], rate=67576.79/min [340000], rate=66019.42/min [350000], rate=64814.81/min [360000], rate=63905.33/min [370000], rate=62889.52/min [380000], rate=62125.34/min [390000], rate=62734.58/min [400000], rate=62176.17/min [410000], rate=61809.05/min [420000], rate=61613.69/min [430000], rate=61282.66/min [440000], rate=60969.98/min [450000], rate=60810.81/min [460000], rate=60659.34/min [470000], rate=60385.44/min [480000], rate=60251.05/min [490000], rate=60000.00/min [500000], rate=59760.96/min [510000], rate=59533.07/min [520000], rate=58536.59/min [530000], rate=58029.20/min [540000], rate=57345.13/min [550000], rate=57291.67/min [560000], rate=56375.84/min [570000], rate=55519.48/min [580000], rate=54716.98/min [590000], rate=53717.75/min [600000], rate=53571.43/min [610000], rate=53665.69/min [620000], rate=53835.02/min [630000], rate=53922.97/min [640000], rate=54008.44/min [650000], rate=54091.54/min [660000], rate=54172.37/min [670000], rate=54397.83/min [680000], rate=54545.45/min [690000], rate=54761.90/min [700000], rate=54901.96/min [710000], rate=55109.96/min [720000], rate=55313.70/min [730000], rate=55583.76/min [740000], rate=55778.89/min [750000], rate=56039.85/min [760000], rate=56365.88/min [770000], rate=56617.65/min [780000], rate=57073.17/min [790000], rate=57315.60/min [800000], rate=57623.05/min [810000], rate=57926.10/min [820000], rate=58224.85/min [830000], rate=58588.24/min [840000], rate=58947.37/min [850000], rate=59302.33/min [860000], rate=59584.30/min [870000], rate=59931.11/min [880000], rate=59459.46/min [890000], rate=59005.52/min [900000], rate=58568.33/min [910000], rate=58208.96/min [920000], rate=57801.05/min [930000], rate=57348.41/min [940000], rate=56797.58/min [950000], rate=56324.11/min [960000], rate=55813.95/min [970000], rate=55375.83/min [980000], rate=55211.27/min [990000], rate=54746.54/min [1000000], rate=54545.45/min [1010000], rate=54349.78/min [1020000], rate=54255.32/min [1030000], rate=54068.24/min [1040000], rate=53793.10/min [1050000], rate=53708.44/min [1060000], rate=53266.33/min [1070000], rate=52796.05/min [1080000], rate=52554.74/min [1090000], rate=52403.85/min [1100000], rate=52339.41/min [1110000], rate=52440.94/min [1120000], rate=52500.00/min [1130000], rate=52355.21/min [1140000], rate=51975.68/min [1150000], rate=51801.80/min [1160000], rate=51824.27/min [1170000], rate=51884.70/min [1180000], rate=51944.24/min [1190000], rate=51889.53/min [1200000], rate=51539.01/min [1210000], rate=51235.00/min [1220000], rate=51081.65/min [1230000], rate=50791.47/min [1240000], rate=50577.84/min [1250000], rate=50539.08/min [1260000], rate=50534.76/min [1270000], rate=50664.89/min [1280000], rate=50894.63/min [1290000], rate=50988.14/min [1300000], rate=50947.09/min [1310000], rate=50873.79/min [1320000], rate=50867.05/min [1330000], rate=50795.67/min [1340000], rate=50757.58/min [1350000], rate=50688.36/min [1360000], rate=50620.35/min [1370000], rate=50553.51/min [1380000], rate=50487.80/min [1390000], rate=50453.72/min [1400000], rate=50450.45/min [1410000], rate=50417.16/min [1420000], rate=50444.05/min [1430000], rate=50440.92/min [1440000], rate=50437.83/min [1450000], rate=50434.78/min [1460000], rate=50402.76/min [1470000], rate=50371.22/min [1480000], rate=49915.68/min [1490000], rate=49529.09/min [1500000], rate=49559.47/min [1510000], rate=49643.84/min [1520000], rate=49754.50/min [1530000], rate=49837.13/min [1540000], rate=49945.95/min [1550000], rate=50053.82/min [1560000], rate=50187.67/min [1570000], rate=50320.51/min [1580000], rate=50452.37/min [1590000], rate=50583.24/min [1600000], rate=50713.15/min [1610000], rate=50868.88/min [1620000], rate=51050.42/min [1630000], rate=51150.63/min [1640000], rate=51276.71/min [1650000], rate=51428.57/min [1660000], rate=51579.49/min [1670000], rate=51702.79/min [1680000], rate=51851.85/min [1690000], rate=51946.72/min [1700000], rate=52093.97/min [1710000], rate=52240.33/min [1720000], rate=52332.66/min [1730000], rate=52371.34/min [1740000], rate=52647.50/min [1750000], rate=52923.39/min [1760000], rate=53225.81/min [1770000], rate=53474.32/min [1780000], rate=53749.37/min [1790000], rate=54024.14/min [1800000], rate=54244.10/min [1810000], rate=54354.35/min [1820000], rate=54518.22/min [1830000], rate=54790.42/min [1840000], rate=55034.90/min [1850000], rate=55196.42/min [1860000], rate=55302.28/min [1870000], rate=55489.61/min [1880000], rate=55621.30/min [1890000], rate=55697.45/min [1900000], rate=55854.97/min [1910000], rate=56039.12/min [1920000], rate=56058.39/min [1930000], rate=56077.48/min [1940000], rate=56150.51/min [1950000], rate=56331.25/min [1960000], rate=56565.66/min [1970000], rate=56826.92/min [1980000], rate=56951.10/min [1990000], rate=56965.65/min [2000000], rate=57170.08/min [2010000], rate=57428.57/min [2020000], rate=57549.86/min [2030000], rate=57697.77/min [2040000], rate=57735.85/min [2050000], rate=57746.48/min [2060000], rate=57973.73/min [2070000], rate=58227.85/min [2080000], rate=58481.72/min [2090000], rate=58735.36/min [2100000], rate=58961.16/min [2110000], rate=59241.93/min [2120000], rate=59383.75/min [2130000], rate=59414.23/min [2140000], rate=59527.12/min [2150000], rate=59777.57/min [2160000], rate=59972.24/min [2170000], rate=60110.80/min [2180000], rate=60137.93/min [2190000], rate=60275.23/min [2200000], rate=60384.26/min [2210000], rate=60465.12/min [2220000], rate=60628.13/min [2230000], rate=60873.52/min [2240000], rate=61118.69/min [2250000], rate=61252.27/min [2260000], rate=61274.29/min [2270000], rate=61185.98/min [2280000], rate=61044.18/min [2290000], rate=61066.67/min [2300000], rate=61224.49/min [2310000], rate=61436.17/min [2320000], rate=61456.95/min [2330000], rate=61288.91/min [2340000], rate=61096.61/min [2350000], rate=61038.96/min [2360000], rate=61060.80/min [2370000], rate=61293.10/min [2380000], rate=61498.71/min [2390000], rate=61597.94/min [2400000], rate=61512.17/min [2410000], rate=61401.27/min [2420000], rate=61577.61/min [2430000], rate=61805.85/min [2440000], rate=62033.90/min [2450000], rate=62261.75/min [2460000], rate=62489.42/min [2470000], rate=62610.90/min [2480000], rate=62547.29/min [2490000], rate=62510.46/min [2500000], rate=62604.34/min [2510000], rate=62723.87/min [2520000], rate=62921.35/min [2530000], rate=63066.06/min [2540000], rate=63157.89/min [2550000], rate=63197.03/min [2560000], rate=63131.94/min [2570000], rate=63093.29/min [2580000], rate=63054.99/min [2590000], rate=63119.42/min [2600000], rate=63004.85/min [2610000], rate=63068.87/min [2620000], rate=63157.89/min [2630000], rate=63195.84/min [2640000], rate=63107.57/min [2650000], rate=63321.39/min [2660000], rate=63535.03/min [2670000], rate=63773.89/min [2680000], rate=63936.38/min [2690000], rate=63971.46/min [2700000], rate=64107.64/min [2710000], rate=64268.77/min [2720000], rate=64378.70/min [2730000], rate=64513.59/min [2740000], rate=64622.64/min [2750000], rate=64629.85/min -building interval tree based on /tmp/nxf.l3FwjedXTv/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.08 min). -mapping reads to genes [10000], rate=75000.00/min [20000], rate=80000.00/min [30000], rate=78260.87/min [40000], rate=82758.62/min [50000], rate=85714.29/min [60000], rate=90000.00/min [70000], rate=91304.35/min [80000], rate=94117.65/min [90000], rate=94736.84/min [100000], rate=95238.10/min [110000], rate=92957.75/min [120000], rate=86746.99/min [130000], rate=83870.97/min [140000], rate=80769.23/min [150000], rate=78947.37/min [160000], rate=78048.78/min [170000], rate=77272.73/min [180000], rate=77142.86/min [190000], rate=77027.03/min [200000], rate=77419.35/min [210000], rate=77777.78/min [220000], rate=78106.51/min [230000], rate=78409.09/min [240000], rate=79120.88/min [250000], rate=79787.23/min [260000], rate=80412.37/min [270000], rate=81000.00/min [280000], rate=81553.40/min [290000], rate=82464.45/min [300000], rate=84112.15/min [310000], rate=85321.10/min [320000], rate=87671.23/min [330000], rate=89189.19/min [340000], rate=89867.84/min [350000], rate=91304.35/min [360000], rate=93103.45/min [370000], rate=94468.09/min [380000], rate=96202.53/min [390000], rate=97095.44/min [400000], rate=98765.43/min [410000], rate=100000.00/min [420000], rate=101204.82/min [430000], rate=102788.84/min [440000], rate=104347.83/min [450000], rate=105468.75/min [460000], rate=106976.74/min [470000], rate=108461.54/min [480000], rate=109090.91/min [490000], rate=109701.49/min [500000], rate=111111.11/min [510000], rate=111678.83/min [520000], rate=112230.22/min [530000], rate=112765.96/min [540000], rate=113684.21/min [550000], rate=114982.58/min [560000], rate=115862.07/min [570000], rate=117123.29/min [580000], rate=118367.35/min [590000], rate=119594.59/min [600000], rate=120805.37/min [610000], rate=121594.68/min [620000], rate=122772.28/min [630000], rate=123127.04/min [640000], rate=123870.97/min [650000], rate=124203.82/min [660000], rate=124921.14/min [670000], rate=125625.00/min [680000], rate=124012.16/min [690000], rate=121764.71/min [700000], rate=119658.12/min [710000], rate=118005.54/min [720000], rate=116442.05/min [730000], rate=114960.63/min [740000], rate=113846.15/min [750000], rate=113065.33/min [760000], rate=112039.31/min [770000], rate=111325.30/min [780000], rate=110900.47/min [790000], rate=110747.66/min [800000], rate=110344.83/min [810000], rate=110204.08/min [820000], rate=110067.11/min [830000], rate=109933.77/min [840000], rate=110043.67/min [850000], rate=110629.07/min [860000], rate=110729.61/min [870000], rate=110593.22/min [880000], rate=110460.25/min [890000], rate=110330.58/min [900000], rate=109090.91/min [910000], rate=105813.95/min [920000], rate=103759.40/min [930000], rate=100722.02/min [940000], rate=98429.32/min [950000], rate=96121.42/min [960000], rate=94271.69/min [970000], rate=93120.00/min [980000], rate=93037.97/min [990000], rate=93249.61/min [1000000], rate=92165.90/min [1010000], rate=90044.58/min [1020000], rate=87804.88/min [1030000], rate=86312.85/min [1040000], rate=85714.29/min [1050000], rate=85365.85/min [1060000], rate=84800.00/min [1070000], rate=83702.74/min [1080000], rate=82970.55/min [1090000], rate=82367.76/min [1100000], rate=82089.55/min [1110000], rate=81717.79/min [1120000], rate=81061.52/min [1130000], rate=80236.69/min [1140000], rate=79906.54/min [1150000], rate=79401.61/min [1160000], rate=79090.91/min [1170000], rate=78699.55/min [1180000], rate=78405.32/min [1190000], rate=77947.60/min [1200000], rate=77753.78/min [1210000], rate=77564.10/min [1220000], rate=77296.73/min [1230000], rate=76715.18/min [1240000], rate=76464.54/min [1250000], rate=76142.13/min [1260000], rate=75675.68/min [1270000], rate=75222.11/min [1280000], rate=74418.60/min [1290000], rate=73226.11/min [1300000], rate=72356.22/min [1310000], rate=71846.44/min [1320000], rate=71674.21/min [1330000], rate=71505.38/min [1340000], rate=71403.20/min [1350000], rate=71302.82/min [1360000], rate=71266.38/min [1370000], rate=71107.27/min [1380000], rate=70769.23/min [1390000], rate=70737.91/min [1400000], rate=70707.07/min [1410000], rate=70617.70/min [1420000], rate=70239.08/min [1430000], rate=70098.04/min [1440000], rate=70072.99/min [1450000], rate=69935.69/min [1460000], rate=69745.22/min [1470000], rate=69558.36/min [1480000], rate=69483.57/min [1490000], rate=69409.94/min [1500000], rate=69337.44/min [1510000], rate=69319.05/min [1520000], rate=69353.61/min [1530000], rate=69335.35/min [1540000], rate=69421.49/min [1550000], rate=69610.78/min [1560000], rate=69694.71/min [1570000], rate=69829.50/min [1580000], rate=70014.77/min [1590000], rate=70147.06/min [1600000], rate=70278.18/min [1610000], rate=70459.52/min [1620000], rate=70537.01/min [1630000], rate=70664.74/min [1640000], rate=70285.71/min [1650000], rate=69279.22/min [1660000], rate=68642.32/min [1670000], rate=67565.75/min [1680000], rate=66843.50/min [1690000], rate=65335.05/min [1700000], rate=64761.90/min [1710000], rate=64528.30/min [1720000], rate=64099.38/min [1730000], rate=63837.64/min [1740000], rate=63542.30/min [1750000], rate=63291.14/min [1760000], rate=62819.75/min [1770000], rate=62032.71/min [1780000], rate=61769.81/min [1790000], rate=61653.27/min [1800000], rate=61573.55/min [1810000], rate=61460.10/min [1820000], rate=61348.31/min [1830000], rate=61101.84/min [1840000], rate=61028.19/min [1850000], rate=60989.01/min [1860000], rate=60917.03/min [1870000], rate=60813.01/min [1880000], rate=60775.86/min [1890000], rate=60771.70/min [1900000], rate=60638.30/min [1910000], rate=60634.92/min [1920000], rate=60536.00/min [1930000], rate=60533.19/min [1940000], rate=60530.42/min [1950000], rate=60433.88/min [1960000], rate=60369.61/min [1970000], rate=60275.37/min [1980000], rate=60273.97/min [1990000], rate=60211.80/min [2000000], rate=60240.96/min [2010000], rate=60360.36/min [2020000], rate=60448.88/min [2030000], rate=60446.65/min [2040000], rate=60414.61/min [2050000], rate=60412.57/min [2060000], rate=60204.58/min [2070000], rate=60174.42/min [2080000], rate=60231.66/min [2090000], rate=60288.46/min [2100000], rate=60402.68/min [2110000], rate=60487.34/min [2120000], rate=60542.60/min [2130000], rate=60454.12/min [2140000], rate=60253.40/min [2150000], rate=60167.91/min [2160000], rate=60027.79/min [2170000], rate=59944.75/min [2180000], rate=60000.00/min [2190000], rate=59863.33/min [2200000], rate=59782.61/min [2210000], rate=59783.59/min [2220000], rate=59838.27/min [2230000], rate=59865.77/min [2240000], rate=59839.72/min [2250000], rate=59760.96/min [2260000], rate=59683.10/min [2270000], rate=59554.00/min [2280000], rate=59607.84/min [2290000], rate=59661.31/min [2300000], rate=59662.78/min [2310000], rate=59715.64/min [2320000], rate=59640.10/min [2330000], rate=59590.79/min [2340000], rate=59567.25/min [2350000], rate=59569.07/min [2360000], rate=59520.81/min [2370000], rate=59497.91/min [2380000], rate=59302.33/min [2390000], rate=59280.69/min [2400000], rate=59308.07/min [2410000], rate=59408.38/min [2420000], rate=59435.12/min [2430000], rate=59437.42/min [2440000], rate=59415.58/min [2450000], rate=59417.95/min [2460000], rate=59468.17/min [2470000], rate=59494.18/min [2480000], rate=59448.66/min [2490000], rate=59356.38/min [2500000], rate=59382.42/min [2510000], rate=59431.73/min [2520000], rate=59387.27/min [2530000], rate=59366.45/min [2540000], rate=59345.79/min [2550000], rate=59233.45/min [2560000], rate=59190.75/min [2570000], rate=59148.45/min [2580000], rate=59106.53/min [2590000], rate=58997.72/min [2600000], rate=58823.53/min [2610000], rate=58761.73/min [2620000], rate=58700.52/min [2630000], rate=58705.36/min [2640000], rate=58710.16/min [2650000], rate=58606.71/min [2660000], rate=58568.81/min [2670000], rate=58574.04/min [2680000], rate=58579.23/min [2690000], rate=58648.26/min [2700000], rate=58695.65/min [2710000], rate=58721.56/min -building interval tree based on /tmp/nxf.l3FwjedXTv/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.08 min). -mapping reads to genes [10000], rate=75000.00/min [20000], rate=80000.00/min [30000], rate=85714.29/min [40000], rate=92307.69/min [50000], rate=100000.00/min [60000], rate=94736.84/min [70000], rate=93333.33/min [80000], rate=90566.04/min [90000], rate=91525.42/min [100000], rate=93750.00/min [110000], rate=94285.71/min [120000], rate=93506.49/min [130000], rate=96296.30/min [140000], rate=97674.42/min [150000], rate=97826.09/min [160000], rate=97959.18/min [170000], rate=98076.92/min [180000], rate=97297.30/min [190000], rate=98275.86/min [200000], rate=98360.66/min [210000], rate=98437.50/min [220000], rate=99248.12/min [230000], rate=98571.43/min [240000], rate=99310.34/min [250000], rate=99337.75/min [260000], rate=93975.90/min [270000], rate=88043.48/min [280000], rate=84422.11/min [290000], rate=82464.45/min [300000], rate=80000.00/min [310000], rate=77824.27/min [320000], rate=77108.43/min [330000], rate=75572.52/min [340000], rate=74181.82/min [350000], rate=72164.95/min [360000], rate=71052.63/min [370000], rate=70031.55/min [380000], rate=69090.91/min [390000], rate=68421.05/min [400000], rate=67415.73/min [410000], rate=66847.83/min [420000], rate=66666.67/min [430000], rate=66666.67/min [440000], rate=66666.67/min [450000], rate=66666.67/min [460000], rate=66666.67/min [470000], rate=66983.37/min [480000], rate=66976.74/min [490000], rate=67123.29/min [500000], rate=67415.73/min [510000], rate=67699.12/min [520000], rate=68122.27/min [530000], rate=68387.10/min [540000], rate=68936.17/min [550000], rate=69473.68/min [560000], rate=69854.47/min [570000], rate=69512.20/min [580000], rate=68774.70/min [590000], rate=67816.09/min [600000], rate=67289.72/min [610000], rate=66910.42/min [620000], rate=66786.36/min [630000], rate=66666.67/min [640000], rate=66321.24/min [650000], rate=65546.22/min [660000], rate=65346.53/min [670000], rate=65153.97/min [680000], rate=64968.15/min [690000], rate=64992.15/min [700000], rate=65217.39/min [710000], rate=65337.42/min [720000], rate=65653.50/min [730000], rate=65864.66/min [740000], rate=66071.43/min [750000], rate=66176.47/min [760000], rate=66086.96/min [770000], rate=65625.00/min [780000], rate=65181.06/min [790000], rate=65020.58/min [800000], rate=63829.79/min [810000], rate=62790.70/min [820000], rate=62357.41/min [830000], rate=62250.00/min [840000], rate=62299.13/min [850000], rate=62195.12/min [860000], rate=62019.23/min [870000], rate=62068.97/min [880000], rate=62411.35/min [890000], rate=62310.39/min [900000], rate=62427.75/min [910000], rate=62542.96/min [920000], rate=62656.07/min [930000], rate=62837.84/min [940000], rate=63016.76/min [950000], rate=63192.90/min [960000], rate=63366.34/min [970000], rate=63537.12/min [980000], rate=63705.31/min [990000], rate=63802.36/min [1000000], rate=63965.88/min [1010000], rate=64194.92/min [1020000], rate=64353.31/min [1030000], rate=64576.80/min [1040000], rate=64663.21/min [1050000], rate=64881.57/min [1060000], rate=64048.34/min [1070000], rate=63126.84/min [1080000], rate=62851.60/min [1090000], rate=62285.71/min [1100000], rate=61338.29/min [1110000], rate=60989.01/min [1120000], rate=60814.48/min [1130000], rate=59946.95/min [1140000], rate=59633.83/min [1150000], rate=59534.08/min [1160000], rate=59385.67/min [1170000], rate=59190.56/min [1180000], rate=59049.21/min [1190000], rate=58668.86/min [1200000], rate=58536.59/min [1210000], rate=58454.11/min [1220000], rate=58280.25/min [1230000], rate=58201.89/min [1240000], rate=58034.32/min [1250000], rate=58004.64/min [1260000], rate=57316.15/min [1270000], rate=56696.43/min [1280000], rate=56304.99/min [1290000], rate=55803.89/min [1300000], rate=55437.10/min [1310000], rate=55080.59/min [1320000], rate=54771.78/min [1330000], rate=55034.48/min [1340000], rate=55030.80/min [1350000], rate=55064.58/min [1360000], rate=55172.41/min [1370000], rate=55390.84/min [1380000], rate=55533.20/min [1390000], rate=55562.96/min [1400000], rate=55666.00/min [1410000], rate=55731.23/min [1420000], rate=55686.27/min [1430000], rate=54964.77/min [1440000], rate=54718.18/min [1450000], rate=54579.67/min [1460000], rate=54040.72/min [1470000], rate=53649.64/min [1480000], rate=53461.77/min [1490000], rate=53309.48/min [1500000], rate=53222.95/min [1510000], rate=53075.57/min [1520000], rate=52992.45/min [1530000], rate=52941.18/min [1540000], rate=52920.96/min [1550000], rate=52961.28/min [1560000], rate=53001.13/min [1570000], rate=53010.69/min [1580000], rate=52608.21/min [1590000], rate=52273.97/min [1600000], rate=52032.52/min [1610000], rate=52019.39/min [1620000], rate=52090.03/min [1630000], rate=52021.28/min [1640000], rate=51980.98/min [1650000], rate=51995.80/min [1660000], rate=51902.03/min [1670000], rate=51836.52/min [1680000], rate=51878.54/min [1690000], rate=51867.01/min [1700000], rate=51881.99/min [1710000], rate=51896.81/min [1720000], rate=51833.25/min [1730000], rate=51900.00/min [1740000], rate=51888.67/min [1750000], rate=51903.11/min [1760000], rate=51994.09/min [1770000], rate=52084.36/min [1780000], rate=52173.91/min [1790000], rate=52288.22/min [1800000], rate=52401.75/min [1810000], rate=52539.91/min [1820000], rate=52651.88/min [1830000], rate=52737.75/min [1840000], rate=52848.25/min [1850000], rate=52958.02/min [1860000], rate=53092.29/min [1870000], rate=53074.74/min [1880000], rate=53032.44/min [1890000], rate=52916.47/min [1900000], rate=52558.78/min [1910000], rate=52209.57/min [1920000], rate=51752.02/min [1930000], rate=51398.14/min [1940000], rate=50918.64/min [1950000], rate=50561.80/min [1960000], rate=50277.90/min [1970000], rate=50276.48/min [1980000], rate=50360.32/min [1990000], rate=50422.30/min [2000000], rate=50505.05/min [2010000], rate=50629.72/min [2020000], rate=50732.52/min [2030000], rate=50834.72/min [2040000], rate=50957.54/min [2050000], rate=51079.73/min [2060000], rate=51222.54/min [2070000], rate=51386.02/min [2080000], rate=51548.95/min [2090000], rate=51668.73/min [2100000], rate=51809.21/min [2110000], rate=51949.12/min [2120000], rate=52088.45/min [2130000], rate=52205.88/min [2140000], rate=52322.74/min [2150000], rate=52311.44/min [2160000], rate=52321.36/min [2170000], rate=52331.19/min [2180000], rate=52340.94/min [2190000], rate=52329.75/min [2200000], rate=52235.85/min [2210000], rate=52225.29/min [2220000], rate=52276.30/min [2230000], rate=52306.49/min [2240000], rate=52356.84/min [2250000], rate=52406.83/min [2260000], rate=52456.48/min [2270000], rate=52546.30/min [2280000], rate=52615.38/min [2290000], rate=52663.86/min [2300000], rate=52711.99/min [2310000], rate=52800.00/min [2320000], rate=52887.54/min [2330000], rate=52974.61/min [2340000], rate=53061.22/min [2350000], rate=53127.35/min [2360000], rate=53193.09/min [2370000], rate=53358.35/min [2380000], rate=53563.39/min [2390000], rate=53687.76/min [2400000], rate=53811.66/min [2410000], rate=53894.89/min [2420000], rate=53997.77/min [2430000], rate=54100.19/min [2440000], rate=54182.09/min [2450000], rate=54283.60/min [2460000], rate=54364.64/min [2470000], rate=54445.26/min [2480000], rate=54425.75/min [2490000], rate=54505.65/min [2500000], rate=54605.02/min [2510000], rate=54723.84/min [2520000], rate=54703.33/min [2530000], rate=54683.00/min [2540000], rate=54682.45/min [2550000], rate=54701.47/min [2560000], rate=54642.48/min [2570000], rate=54661.47/min [2580000], rate=54603.17/min [2590000], rate=54641.35/min [2600000], rate=54660.13/min [2610000], rate=54716.98/min [2620000], rate=54716.32/min [2630000], rate=54772.65/min [2640000], rate=54847.65/min [2650000], rate=54941.26/min [2660000], rate=55015.51/min [2670000], rate=55146.30/min [2680000], rate=55314.76/min [2690000], rate=55482.98/min [2700000], rate=55574.61/min [2710000], rate=55665.87/min [2720000], rate=55756.75/min [2730000], rate=55866.30/min [2740000], rate=55937.39/min -building interval tree based on /tmp/nxf.l3FwjedXTv/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.08 min). -mapping reads to genes [10000], rate=100000.00/min [20000], rate=109090.91/min [30000], rate=105882.35/min [40000], rate=133333.33/min [50000], rate=166666.67/min [60000], rate=180000.00/min [70000], rate=175000.00/min [80000], rate=154838.71/min [90000], rate=150000.00/min [100000], rate=146341.46/min [110000], rate=153488.37/min [120000], rate=167441.86/min [130000], rate=181395.35/min [140000], rate=175000.00/min [150000], rate=166666.67/min [160000], rate=168421.05/min [170000], rate=175862.07/min [180000], rate=183050.85/min [190000], rate=193220.34/min [200000], rate=203389.83/min [210000], rate=213559.32/min [220000], rate=209523.81/min [230000], rate=209090.91/min [240000], rate=205714.29/min [250000], rate=205479.45/min [260000], rate=205263.16/min [270000], rate=207692.31/min [280000], rate=215384.62/min [290000], rate=217500.00/min [300000], rate=214285.71/min [310000], rate=206666.67/min [320000], rate=204255.32/min [330000], rate=202040.82/min [340000], rate=206060.61/min [350000], rate=210000.00/min [360000], rate=211764.71/min [370000], rate=207476.64/min [380000], rate=198260.87/min [390000], rate=196638.66/min [400000], rate=195121.95/min [410000], rate=200000.00/min [420000], rate=204878.05/min [430000], rate=206400.00/min [440000], rate=200000.00/min [450000], rate=195652.17/min [460000], rate=198561.15/min [470000], rate=202877.70/min [480000], rate=207194.24/min [490000], rate=211510.79/min [500000], rate=214285.71/min [510000], rate=217021.28/min [520000], rate=215172.41/min [530000], rate=213422.82/min [540000], rate=213157.89/min [550000], rate=211538.46/min [560000], rate=212658.23/min [570000], rate=215094.34/min [580000], rate=218867.92/min [590000], rate=217177.91/min [600000], rate=213017.75/min [610000], rate=210344.83/min [620000], rate=207821.23/min [630000], rate=206557.38/min [640000], rate=208695.65/min [650000], rate=210810.81/min [660000], rate=211764.71/min [670000], rate=209375.00/min [680000], rate=208163.27/min [690000], rate=208040.20/min [700000], rate=208955.22/min [710000], rate=205797.10/min [720000], rate=207692.31/min [730000], rate=210576.92/min [740000], rate=213461.54/min [750000], rate=216346.15/min [760000], rate=216113.74/min [770000], rate=214883.72/min [780000], rate=213698.63/min [790000], rate=213513.51/min [800000], rate=212389.38/min [810000], rate=214096.92/min [820000], rate=215789.47/min [830000], rate=214655.17/min [840000], rate=211764.71/min [850000], rate=209876.54/min [860000], rate=208064.52/min [870000], rate=209638.55/min [880000], rate=211200.00/min [890000], rate=212749.00/min [900000], rate=211764.71/min [910000], rate=209195.40/min [920000], rate=209885.93/min [930000], rate=211363.64/min [940000], rate=208118.08/min [950000], rate=209558.82/min [960000], rate=211764.71/min [970000], rate=213970.59/min [980000], rate=215384.62/min [990000], rate=216000.00/min [1000000], rate=215053.76/min [1010000], rate=214893.62/min [1020000], rate=214736.84/min [1030000], rate=213840.83/min [1040000], rate=215172.41/min [1050000], rate=215753.42/min [1060000], rate=214141.41/min [1070000], rate=201253.92/min [1080000], rate=190029.33/min [1090000], rate=179670.33/min [1100000], rate=171428.57/min [1110000], rate=164851.49/min [1120000], rate=158865.25/min [1130000], rate=153741.50/min [1140000], rate=149019.61/min [1150000], rate=144351.46/min [1160000], rate=138922.16/min [1170000], rate=133969.47/min [1180000], rate=125309.73/min [1190000], rate=119798.66/min [1200000], rate=114467.41/min [1210000], rate=109667.67/min [1220000], rate=105323.74/min [1230000], rate=101793.10/min [1240000], rate=96875.00/min [1250000], rate=94221.11/min [1260000], rate=91747.57/min [1270000], rate=89541.72/min [1280000], rate=88174.51/min [1290000], rate=86480.45/min [1300000], rate=84874.86/min [1310000], rate=83528.16/min [1320000], rate=82072.54/min [1330000], rate=80606.06/min [1340000], rate=79056.05/min [1350000], rate=78260.87/min [1360000], rate=77714.29/min [1370000], rate=77110.69/min [1380000], rate=75754.80/min [1390000], rate=74530.83/min [1400000], rate=73878.63/min [1410000], rate=73120.14/min [1420000], rate=72203.39/min [1430000], rate=71381.03/min [1440000], rate=70530.61/min [1450000], rate=69544.36/min [1460000], rate=68976.38/min [1470000], rate=68638.13/min [1480000], rate=68412.94/min [1490000], rate=67573.70/min [1500000], rate=66568.05/min [1510000], rate=65557.16/min [1520000], rate=64635.01/min [1530000], rate=64375.88/min [1540000], rate=64033.26/min [1550000], rate=63351.50/min [1560000], rate=62734.58/min [1570000], rate=62055.34/min [1580000], rate=61558.44/min [1590000], rate=61193.07/min [1600000], rate=60759.49/min [1610000], rate=60450.56/min [1620000], rate=60074.17/min [1630000], rate=59779.95/min [1640000], rate=59564.16/min [1650000], rate=59423.77/min [1660000], rate=59285.71/min [1670000], rate=59115.04/min [1680000], rate=58947.37/min [1690000], rate=58885.02/min [1700000], rate=58789.63/min [1710000], rate=58762.89/min [1720000], rate=58075.41/min [1730000], rate=57602.66/min [1740000], rate=57111.60/min [1750000], rate=56787.45/min [1760000], rate=56410.26/min [1770000], rate=56012.66/min [1780000], rate=55799.37/min [1790000], rate=55821.21/min [1800000], rate=55871.70/min [1810000], rate=55892.95/min [1820000], rate=56000.00/min [1830000], rate=56106.29/min [1840000], rate=56183.21/min [1850000], rate=56288.03/min [1860000], rate=56420.63/min [1870000], rate=56523.93/min [1880000], rate=56654.95/min [1890000], rate=56671.66/min [1900000], rate=56829.51/min [1910000], rate=56958.25/min [1920000], rate=57142.86/min [1930000], rate=57298.37/min [1940000], rate=57453.11/min [1950000], rate=57550.42/min [1960000], rate=57393.85/min [1970000], rate=57046.33/min [1980000], rate=56571.43/min [1990000], rate=56267.67/min [2000000], rate=55632.82/min [2010000], rate=55270.39/min [2020000], rate=55115.96/min [2030000], rate=54963.90/min [2040000], rate=54814.15/min [2050000], rate=54690.97/min [2060000], rate=54353.56/min [2070000], rate=53859.50/min [2080000], rate=53242.32/min [2090000], rate=52755.57/min [2100000], rate=52390.85/min [2110000], rate=52335.68/min [2120000], rate=52367.23/min [2130000], rate=52163.27/min [2140000], rate=51941.75/min [2150000], rate=51911.47/min [2160000], rate=51881.51/min [2170000], rate=51687.18/min [2180000], rate=51618.00/min [2190000], rate=51569.86/min [2200000], rate=51582.65/min [2210000], rate=51575.26/min [2220000], rate=51607.90/min [2230000], rate=51620.37/min [2240000], rate=51612.90/min [2250000], rate=51605.50/min [2260000], rate=51617.81/min [2270000], rate=51649.60/min [2280000], rate=51700.68/min [2290000], rate=51751.41/min [2300000], rate=51801.80/min [2310000], rate=51871.26/min [2320000], rate=51959.69/min [2330000], rate=52008.93/min [2340000], rate=52057.84/min [2350000], rate=52010.33/min [2360000], rate=51963.30/min [2370000], rate=51954.69/min [2380000], rate=52021.86/min [2390000], rate=51881.33/min [2400000], rate=51705.57/min [2410000], rate=51532.43/min [2420000], rate=51380.04/min [2430000], rate=51211.80/min [2440000], rate=51081.65/min [2450000], rate=50953.21/min [2460000], rate=50896.55/min [2470000], rate=50857.93/min [2480000], rate=50802.32/min [2490000], rate=50764.53/min [2500000], rate=50744.25/min [2510000], rate=50724.15/min [2520000], rate=50704.23/min [2530000], rate=50684.47/min [2540000], rate=50664.89/min [2550000], rate=50679.03/min [2560000], rate=50693.07/min [2570000], rate=50690.34/min [2580000], rate=50704.23/min [2590000], rate=50751.14/min [2600000], rate=50814.33/min [2610000], rate=50893.73/min [2620000], rate=50956.24/min [2630000], rate=51034.93/min [2640000], rate=51129.76/min [2650000], rate=51224.23/min [2660000], rate=51318.33/min [2670000], rate=51395.57/min [2680000], rate=51488.95/min [2690000], rate=51614.97/min [2700000], rate=51740.66/min [2710000], rate=51849.49/min [2720000], rate=51957.98/min [2730000], rate=52066.12/min [2740000], rate=52157.36/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.l3FwjedXTv/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.l3FwjedXTv/ctat_genome_lib_build_dir --filt_file /tmp/nxf.l3FwjedXTv/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.l3FwjedXTv/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -parsing /tmp/nxf.l3FwjedXTv/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info. 6000000.00 reads per min processed... 12000000.00 reads per min processed... 9000000.00 reads per min processed... 12000000.00 reads per min processed... 10000000.00 reads per min processed... 12000000.00 reads per min processed... 10500000.00 reads per min processed... 9600000.00 reads per min processed... 10800000.00 reads per min processed... 10000000.00 reads per min processed... 8250000.00 reads per min processed... 8000000.00 reads per min processed... 7090909.09 reads per min processed... 6461538.46 reads per min processed... 6428571.43 reads per min processed... 6000000.00 reads per min processed... 5666666.67 reads per min processed... 5684210.53 reads per min processed... 5428571.43 reads per min processed... 5454545.45 reads per min processed... 5250000.00 reads per min processed... 5280000.00 reads per min processed... 5111111.11 reads per min processed... 5142857.14 reads per min processed... 5000000.00 reads per min processed... 4875000.00 reads per min processed... 4628571.43 reads per min processed... 4540540.54 reads per min processed... 4461538.46 reads per min processed... 4500000.00 reads per min processed... 4428571.43 reads per min processed... 4363636.36 reads per min processed... 4304347.83 reads per min processed... 4250000.00 reads per min processed... 4200000.00 reads per min processed... 4235294.12 reads per min processed... 4188679.25 reads per min processed... 4145454.55 reads per min processed... 4178571.43 reads per min processed... 4137931.03 reads per min processed... 4169491.53 reads per min processed... 4131147.54 reads per min processed... 4095238.10 reads per min processed... 4125000.00 reads per min processed... 4090909.09 reads per min processed... 4119402.99 reads per min processed... 4147058.82 reads per min processed... 4114285.71 reads per min processed... 4140845.07 reads per min processed... 4109589.04 reads per min processed... 4080000.00 reads per min processed... 4105263.16 reads per min processed... 4129870.13 reads per min processed... 4101265.82 reads per min processed... 4125000.00 reads per min processed... 4097560.98 reads per min processed... 4120481.93 reads per min processed... 4142857.14 reads per min processed... 4164705.88 reads per min processed... 4235294.12 reads per min processed... 4255813.95 reads per min processed... 4275862.07 reads per min processed... 4344827.59 reads per min processed... 4363636.36 reads per min processed... 4431818.18 reads per min processed... 4449438.20 reads per min processed... 4417582.42 reads per min processed... 4387096.77 reads per min processed... 4404255.32 reads per min processed... 4375000.00 reads per min processed... 4391752.58 reads per min processed... 4363636.36 reads per min processed... 4380000.00 reads per min processed... 4396039.60 reads per min processed... 4368932.04 reads per min processed... 4342857.14 reads per min processed... 4317757.01 reads per min processed... 4333333.33 reads per min processed... 4348623.85 reads per min processed... 4324324.32 reads per min processed... 4339285.71 reads per min processed... 4315789.47 reads per min processed... 4330434.78 reads per min processed... 4307692.31 reads per min processed... 4322033.90 reads per min processed... 4300000.00 reads per min processed... 4314049.59 reads per min processed... 4292682.93 reads per min processed... done. * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.l3FwjedXTv/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.l3FwjedXTv/./star-fusion.preliminary/star-fusion -parsing fusion evidence: /tmp/nxf.l3FwjedXTv/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -outputting fusion candidates to file: /tmp/nxf.l3FwjedXTv/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.l3FwjedXTv/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.l3FwjedXTv/659_epZ-T1-TRNA-1_B23MHV2LT4_1.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.l3FwjedXTv/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.l3FwjedXTv/./star-fusion.preliminary/star-fusion CMD: mkdir -p /tmp/nxf.l3FwjedXTv/./star-fusion.preliminary/star-fusion.filter.intermediates_dir EM: Starting log likelihood: -702922.651433 EM: Round [1] log likelihood: -702171.159108 EM: Round [2] log likelihood: -701959.532151 EM: Round [3] log likelihood: -701866.978786 EM: Round [4] log likelihood: -701819.396021 EM: Round [5] log likelihood: -701792.729764 EM: Round [6] log likelihood: -701776.791833 EM: Round [7] log likelihood: -701766.700726 EM: Round [8] log likelihood: -701759.961626 EM: Round [9] log likelihood: -701755.240218 EM: Round [10] log likelihood: -701751.792063 EM: Round [11] log likelihood: -701749.183880 EM: Round [12] log likelihood: -701747.152767 EM: Round [13] log likelihood: -701745.532689 EM: Round [14] log likelihood: -701744.214764 EM: Round [15] log likelihood: -701743.125057 EM: Round [16] log likelihood: -701742.211762 EM: Round [17] log likelihood: -701741.437545 EM: Round [18] log likelihood: -701740.774829 EM: Round [19] log likelihood: -701740.202800 EM: Round [20] log likelihood: -701739.705456 EM: Round [21] log likelihood: -701739.270286 EM: Round [22] log likelihood: -701738.887374 EM: Round [23] log likelihood: -701738.548753 EM: Round [24] log likelihood: -701738.247957 EM: Round [25] log likelihood: -701737.979679 EM: Round [26] log likelihood: -701737.739530 EM: Round [27] log likelihood: -701737.523844 EM: Round [28] log likelihood: -701737.329539 EM: Round [29] log likelihood: -701737.154008 EM: Round [30] log likelihood: -701736.995029 EM: Round [31] log likelihood: -701736.850698 EM: Round [32] log likelihood: -701736.719376 EM: Round [33] log likelihood: -701736.599645 EM: Round [34] log likelihood: -701736.490270 EM: Round [35] log likelihood: -701736.390175 EM: Round [36] log likelihood: -701736.298417 EM: Round [37] log likelihood: -701736.214165 EM: Round [38] log likelihood: -701736.136688 EM: Round [39] log likelihood: -701736.065335 EM: Round [40] log likelihood: -701735.999532 EM: Round [41] log likelihood: -701735.938767 EM: Round [42] log likelihood: -701735.882581 EM: Round [43] log likelihood: -701735.830565 EM: Round [44] log likelihood: -701735.782352 EM: Round [45] log likelihood: -701735.737613 EM: Round [46] log likelihood: -701735.696051 EM: Round [47] log likelihood: -701735.657397 EM: Round [48] log likelihood: -701735.621410 EM: Round [49] log likelihood: -701735.587871 EM: Round [50] log likelihood: -701735.556581 EM: Round [51] log likelihood: -701735.527360 EM: Round [52] log likelihood: -701735.500044 EM: Round [53] log likelihood: -701735.474485 EM: Round [54] log likelihood: -701735.450545 EM: Round [55] log likelihood: -701735.428102 EM: Round [56] log likelihood: -701735.407042 EM: Round [57] log likelihood: -701735.387261 EM: Round [58] log likelihood: -701735.368664 EM: Round [59] log likelihood: -701735.351166 EM: Round [60] log likelihood: -701735.334685 EM: Round [61] log likelihood: -701735.319149 EM: Round [62] log likelihood: -701735.304491 EM: Round [63] log likelihood: -701735.290649 EM: Round [64] log likelihood: -701735.277566 EM: Round [65] log likelihood: -701735.265189 EM: Round [66] log likelihood: -701735.253471 EM: Round [67] log likelihood: -701735.242367 EM: Round [68] log likelihood: -701735.231835 EM: Round [69] log likelihood: -701735.221838 EM: Round [70] log likelihood: -701735.212341 EM: Round [71] log likelihood: -701735.203312 EM: Round [72] log likelihood: -701735.194719 EM: Round [73] log likelihood: -701735.186536 EM: Round [74] log likelihood: -701735.178736 EM: Round [75] log likelihood: -701735.171297 EM: Round [76] log likelihood: -701735.164194 EM: Round [77] log likelihood: -701735.157409 EM: Round [78] log likelihood: -701735.150921 EM: Round [79] log likelihood: -701735.144714 EM: Round [80] log likelihood: -701735.138770 EM: Round [81] log likelihood: -701735.133074 EM: Round [82] log likelihood: -701735.127612 EM: Round [83] log likelihood: -701735.122370 EM: Round [84] log likelihood: -701735.117337 EM: Round [85] log likelihood: -701735.112500 EM: Round [86] log likelihood: -701735.107848 EM: Round [87] log likelihood: -701735.103372 EM: Round [88] log likelihood: -701735.099062 EM: Round [89] log likelihood: -701735.094909 EM: Round [90] log likelihood: -701735.090906 EM: Round [91] log likelihood: -701735.087043 EM: Round [92] log likelihood: -701735.083315 EM: Round [93] log likelihood: -701735.079713 EM: Round [94] log likelihood: -701735.076233 EM: Round [95] log likelihood: -701735.072867 EM: Round [96] log likelihood: -701735.069611 EM: Round [97] log likelihood: -701735.066459 EM: Round [98] log likelihood: -701735.063406 EM: Round [99] log likelihood: -701735.060448 EM: Round [100] log likelihood: -701735.057580 EM: Round [101] log likelihood: -701735.054798 EM: Round [102] log likelihood: -701735.052098 EM: Round [103] log likelihood: -701735.049477 EM: Round [104] log likelihood: -701735.046931 EM: Round [105] log likelihood: -701735.044457 EM: Round [106] log likelihood: -701735.042052 EM: Round [107] log likelihood: -701735.039713 EM: Round [108] log likelihood: -701735.037437 EM: Round [109] log likelihood: -701735.035222 EM: Round [110] log likelihood: -701735.033065 EM: Round [111] log likelihood: -701735.030965 EM: Round [112] log likelihood: -701735.028918 EM: Round [113] log likelihood: -701735.026923 EM: Round [114] log likelihood: -701735.024977 EM: Round [115] log likelihood: -701735.023080 EM: Round [116] log likelihood: -701735.021229 EM: Round [117] log likelihood: -701735.019422 EM: Round [118] log likelihood: -701735.017658 EM: Round [119] log likelihood: -701735.015936 EM: Round [120] log likelihood: -701735.014254 EM: Round [121] log likelihood: -701735.012610 EM: Round [122] log likelihood: -701735.011004 EM: Round [123] log likelihood: -701735.009433 EM: Round [124] log likelihood: -701735.007898 EM: Round [125] log likelihood: -701735.006396 EM: Round [126] log likelihood: -701735.004927 EM: Round [127] log likelihood: -701735.003490 EM: Round [128] log likelihood: -701735.002083 EM: Round [129] log likelihood: -701735.000706 EM: Round [130] log likelihood: -701734.999358 EM: Round [131] log likelihood: -701734.998038 EM: Round [132] log likelihood: -701734.996746 EM: Round [133] log likelihood: -701734.995479 EM: Round [134] log likelihood: -701734.994238 EM: Round [135] log likelihood: -701734.993022 EM: Round [136] log likelihood: -701734.991830 EM: Round [137] log likelihood: -701734.990662 EM: Round [138] log likelihood: -701734.989517 EM: Round [139] log likelihood: -701734.988394 EM: Round [140] log likelihood: -701734.987292 EM: Round [141] log likelihood: -701734.986212 EM: Round [142] log likelihood: -701734.985153 EM: Round [143] log likelihood: -701734.984113 EM: Round [144] log likelihood: -701734.983093 EM: Round [145] log likelihood: -701734.982092 EM: Round [146] log likelihood: -701734.981109 EM: Round [147] log likelihood: -701734.980145 EM: Round [148] log likelihood: -701734.979198 EM: Round [149] log likelihood: -701734.978269 EM: Round [150] log likelihood: -701734.977356 EM: Round [151] log likelihood: -701734.976460 EM: Round [152] log likelihood: -701734.975580 EM: Round [153] log likelihood: -701734.974715 EM: Round [154] log likelihood: -701734.973866 EM: Round [155] log likelihood: -701734.973032 EM: Round [156] log likelihood: -701734.972212 EM: Round [157] log likelihood: -701734.971407 EM: Round [158] log likelihood: -701734.970616 EM: Round [159] log likelihood: -701734.969839 EM: Round [160] log likelihood: -701734.969075 EM: Round [161] log likelihood: -701734.968324 EM: Round [162] log likelihood: -701734.967586 EM: Round [163] log likelihood: -701734.966860 EM: Round [164] log likelihood: -701734.966147 EM: Round [165] log likelihood: -701734.965446 EM: Round [166] log likelihood: -701734.964756 EM: Round [167] log likelihood: -701734.964078 EM: Round [168] log likelihood: -701734.963412 EM: Round [169] log likelihood: -701734.962756 EM: Round [170] log likelihood: -701734.962112 EM: Round [171] log likelihood: -701734.961478 EM: Round [172] log likelihood: -701734.960855 EM: Round [173] log likelihood: -701734.960241 EM: Round [174] log likelihood: -701734.959638 EM: Round [175] log likelihood: -701734.959045 EM: Round [176] log likelihood: -701734.958461 EM: Round [177] log likelihood: -701734.957887 EM: Round [178] log likelihood: -701734.957322 EM: Round [179] log likelihood: -701734.956766 EM: Round [180] log likelihood: -701734.956220 EM: Round [181] log likelihood: -701734.955682 EM: Round [182] log likelihood: -701734.955152 EM: Round [183] log likelihood: -701734.954631 EM: Round [184] log likelihood: -701734.954119 EM: Round [185] log likelihood: -701734.953614 EM: Round [186] log likelihood: -701734.953118 EM: Round [187] log likelihood: -701734.952629 EM: Round [188] log likelihood: -701734.952148 EM: Round [189] log likelihood: -701734.951675 EM: Round [190] log likelihood: -701734.951209 EM: Round [191] log likelihood: -701734.950750 EM: Round [192] log likelihood: -701734.950299 EM: Round [193] log likelihood: -701734.949855 EM: Round [194] log likelihood: -701734.949417 EM: Round [195] log likelihood: -701734.948987 EM: Round [196] log likelihood: -701734.948563 EM: Round [197] log likelihood: -701734.948146 EM: Round [198] log likelihood: -701734.947735 EM: Round [199] log likelihood: -701734.947330 EM: Round [200] log likelihood: -701734.946932 EM: Round [201] log likelihood: -701734.946540 EM: Round [202] log likelihood: -701734.946154 EM: Round [203] log likelihood: -701734.945774 EM: Round [204] log likelihood: -701734.945400 EM: Round [205] log likelihood: -701734.945031 EM: Round [206] log likelihood: -701734.944668 EM: Round [207] log likelihood: -701734.944311 EM: Round [208] log likelihood: -701734.943959 EM: Round [209] log likelihood: -701734.943612 EM: Round [210] log likelihood: -701734.943271 EM: Round [211] log likelihood: -701734.942935 EM: Round [212] log likelihood: -701734.942604 EM: Round [213] log likelihood: -701734.942278 EM: Round [214] log likelihood: -701734.941957 EM: Round [215] log likelihood: -701734.941641 EM: Round [216] log likelihood: -701734.941330 EM: Round [217] log likelihood: -701734.941023 EM: Round [218] log likelihood: -701734.940721 EM: Round [219] log likelihood: -701734.940423 EM: Round [220] log likelihood: -701734.940130 EM: Round [221] log likelihood: -701734.939842 EM: Round [222] log likelihood: -701734.939557 EM: Round [223] log likelihood: -701734.939277 EM: Round [224] log likelihood: -701734.939001 EM: Round [225] log likelihood: -701734.938730 EM: Round [226] log likelihood: -701734.938462 EM: Round [227] log likelihood: -701734.938199 EM: Round [228] log likelihood: -701734.937939 EM: Round [229] log likelihood: -701734.937683 EM: Round [230] log likelihood: -701734.937431 EM: Round [231] log likelihood: -701734.937183 EM: Round [232] log likelihood: -701734.936938 EM: Round [233] log likelihood: -701734.936697 EM: Round [234] log likelihood: -701734.936460 EM: Round [235] log likelihood: -701734.936226 EM: Round [236] log likelihood: -701734.935996 EM: Round [237] log likelihood: -701734.935769 EM: Round [238] log likelihood: -701734.935545 EM: Round [239] log likelihood: -701734.935325 EM: Round [240] log likelihood: -701734.935108 EM: Round [241] log likelihood: -701734.934894 EM: Round [242] log likelihood: -701734.934684 EM: Round [243] log likelihood: -701734.934476 EM: Round [244] log likelihood: -701734.934272 EM: Round [245] log likelihood: -701734.934070 EM: Round [246] log likelihood: -701734.933872 EM: Round [247] log likelihood: -701734.933676 EM: Round [248] log likelihood: -701734.933484 EM: Round [249] log likelihood: -701734.933294 EM: Round [250] log likelihood: -701734.933107 EM: Round [251] log likelihood: -701734.932922 EM: Round [252] log likelihood: -701734.932741 EM: Round [253] log likelihood: -701734.932562 EM: Round [254] log likelihood: -701734.932386 EM: Round [255] log likelihood: -701734.932212 EM: Round [256] log likelihood: -701734.932041 EM: Round [257] log likelihood: -701734.931872 EM: Round [258] log likelihood: -701734.931706 EM: Round [259] log likelihood: -701734.931542 EM: Round [260] log likelihood: -701734.931381 EM: Round [261] log likelihood: -701734.931222 EM: Round [262] log likelihood: -701734.931065 EM: Round [263] log likelihood: -701734.930911 EM: Round [264] log likelihood: -701734.930759 EM: Round [265] log likelihood: -701734.930609 EM: Round [266] log likelihood: -701734.930461 EM: Round [267] log likelihood: -701734.930316 EM: Round [268] log likelihood: -701734.930172 EM: Round [269] log likelihood: -701734.930031 EM: Round [270] log likelihood: -701734.929891 EM: Round [271] log likelihood: -701734.929754 EM: Round [272] log likelihood: -701734.929619 EM: Round [273] log likelihood: -701734.929486 EM: Round [274] log likelihood: -701734.929354 EM: Round [275] log likelihood: -701734.929225 EM: Round [276] log likelihood: -701734.929097 EM: Round [277] log likelihood: -701734.928972 EM: Round [278] log likelihood: -701734.928848 EM: Round [279] log likelihood: -701734.928726 EM: Round [280] log likelihood: -701734.928605 EM: Round [281] log likelihood: -701734.928487 EM: Round [282] log likelihood: -701734.928370 EM: Round [283] log likelihood: -701734.928255 EM: Round [284] log likelihood: -701734.928141 EM: Round [285] log likelihood: -701734.928029 EM: Round [286] log likelihood: -701734.927919 EM: Round [287] log likelihood: -701734.927811 EM: Round [288] log likelihood: -701734.927704 EM: Round [289] log likelihood: -701734.927598 EM: Round [290] log likelihood: -701734.927494 EM: Round [291] log likelihood: -701734.927392 EM: Round [292] log likelihood: -701734.927291 EM: Round [293] log likelihood: -701734.927191 EM: Stopping iterations at round 293 due to insufficient improvement in likelihood. EM: Starting log likelihood: -694253.705800 EM: Round [1] log likelihood: -693731.725750 EM: Round [2] log likelihood: -693585.884288 EM: Round [3] log likelihood: -693523.212027 EM: Round [4] log likelihood: -693491.584171 EM: Round [5] log likelihood: -693474.215685 EM: Round [6] log likelihood: -693464.058326 EM: Round [7] log likelihood: -693457.771134 EM: Round [8] log likelihood: -693453.666352 EM: Round [9] log likelihood: -693450.851940 EM: Round [10] log likelihood: -693448.836155 EM: Round [11] log likelihood: -693447.336426 EM: Round [12] log likelihood: -693446.183749 EM: Round [13] log likelihood: -693445.273147 EM: Round [14] log likelihood: -693444.537050 EM: Round [15] log likelihood: -693443.930497 EM: Round [16] log likelihood: -693443.422632 EM: Round [17] log likelihood: -693442.991673 EM: Round [18] log likelihood: -693442.621840 EM: Round [19] log likelihood: -693442.301433 EM: Round [20] log likelihood: -693442.021595 EM: Round [21] log likelihood: -693441.775491 EM: Round [22] log likelihood: -693441.557758 EM: Round [23] log likelihood: -693441.364125 EM: Round [24] log likelihood: -693441.191141 EM: Round [25] log likelihood: -693441.035987 EM: Round [26] log likelihood: -693440.896334 EM: Round [27] log likelihood: -693440.770235 EM: Round [28] log likelihood: -693440.656054 EM: Round [29] log likelihood: -693440.552401 EM: Round [30] log likelihood: -693440.458088 EM: Round [31] log likelihood: -693440.372092 EM: Round [32] log likelihood: -693440.293528 EM: Round [33] log likelihood: -693440.221627 EM: Round [34] log likelihood: -693440.155715 EM: Round [35] log likelihood: -693440.095202 EM: Round [36] log likelihood: -693440.039565 EM: Round [37] log likelihood: -693439.988344 EM: Round [38] log likelihood: -693439.941128 EM: Round [39] log likelihood: -693439.897554 EM: Round [40] log likelihood: -693439.857295 EM: Round [41] log likelihood: -693439.820060 EM: Round [42] log likelihood: -693439.785586 EM: Round [43] log likelihood: -693439.753637 EM: Round [44] log likelihood: -693439.724002 EM: Round [45] log likelihood: -693439.696488 EM: Round [46] log likelihood: -693439.670920 EM: Round [47] log likelihood: -693439.647143 EM: Round [48] log likelihood: -693439.625012 EM: Round [49] log likelihood: -693439.604397 EM: Round [50] log likelihood: -693439.585181 EM: Round [51] log likelihood: -693439.567254 EM: Round [52] log likelihood: -693439.550518 EM: Round [53] log likelihood: -693439.534883 EM: Round [54] log likelihood: -693439.520266 EM: Round [55] log likelihood: -693439.506592 EM: Round [56] log likelihood: -693439.493792 EM: Round [57] log likelihood: -693439.481800 EM: Round [58] log likelihood: -693439.470560 EM: Round [59] log likelihood: -693439.460018 EM: Round [60] log likelihood: -693439.450123 EM: Round [61] log likelihood: -693439.440830 EM: Round [62] log likelihood: -693439.432097 EM: Round [63] log likelihood: -693439.423886 EM: Round [64] log likelihood: -693439.416160 EM: Round [65] log likelihood: -693439.408887 EM: Round [66] log likelihood: -693439.402036 EM: Round [67] log likelihood: -693439.395578 EM: Round [68] log likelihood: -693439.389487 EM: Round [69] log likelihood: -693439.383740 EM: Round [70] log likelihood: -693439.378313 EM: Round [71] log likelihood: -693439.373186 EM: Round [72] log likelihood: -693439.368339 EM: Round [73] log likelihood: -693439.363755 EM: Round [74] log likelihood: -693439.359417 EM: Round [75] log likelihood: -693439.355309 EM: Round [76] log likelihood: -693439.351418 EM: Round [77] log likelihood: -693439.347728 EM: Round [78] log likelihood: -693439.344229 EM: Round [79] log likelihood: -693439.340908 EM: Round [80] log likelihood: -693439.337755 EM: Round [81] log likelihood: -693439.334760 EM: Round [82] log likelihood: -693439.331913 EM: Round [83] log likelihood: -693439.329205 EM: Round [84] log likelihood: -693439.326628 EM: Round [85] log likelihood: -693439.324175 EM: Round [86] log likelihood: -693439.321838 EM: Round [87] log likelihood: -693439.319611 EM: Round [88] log likelihood: -693439.317488 EM: Round [89] log likelihood: -693439.315462 EM: Round [90] log likelihood: -693439.313528 EM: Round [91] log likelihood: -693439.311682 EM: Round [92] log likelihood: -693439.309917 EM: Round [93] log likelihood: -693439.308231 EM: Round [94] log likelihood: -693439.306618 EM: Round [95] log likelihood: -693439.305075 EM: Round [96] log likelihood: -693439.303597 EM: Round [97] log likelihood: -693439.302182 EM: Round [98] log likelihood: -693439.300826 EM: Round [99] log likelihood: -693439.299526 EM: Round [100] log likelihood: -693439.298279 EM: Round [101] log likelihood: -693439.297083 EM: Round [102] log likelihood: -693439.295935 EM: Round [103] log likelihood: -693439.294832 EM: Round [104] log likelihood: -693439.293772 EM: Round [105] log likelihood: -693439.292754 EM: Round [106] log likelihood: -693439.291774 EM: Round [107] log likelihood: -693439.290832 EM: Round [108] log likelihood: -693439.289925 EM: Round [109] log likelihood: -693439.289051 EM: Round [110] log likelihood: -693439.288210 EM: Round [111] log likelihood: -693439.287400 EM: Round [112] log likelihood: -693439.286618 EM: Round [113] log likelihood: -693439.285865 EM: Round [114] log likelihood: -693439.285138 EM: Round [115] log likelihood: -693439.284436 EM: Round [116] log likelihood: -693439.283758 EM: Round [117] log likelihood: -693439.283104 EM: Round [118] log likelihood: -693439.282472 EM: Round [119] log likelihood: -693439.281861 EM: Round [120] log likelihood: -693439.281270 EM: Round [121] log likelihood: -693439.280698 EM: Round [122] log likelihood: -693439.280145 EM: Round [123] log likelihood: -693439.279610 EM: Round [124] log likelihood: -693439.279091 EM: Round [125] log likelihood: -693439.278589 EM: Round [126] log likelihood: -693439.278103 EM: Round [127] log likelihood: -693439.277632 EM: Round [128] log likelihood: -693439.277175 EM: Round [129] log likelihood: -693439.276731 EM: Round [130] log likelihood: -693439.276301 EM: Round [131] log likelihood: -693439.275884 EM: Round [132] log likelihood: -693439.275479 EM: Round [133] log likelihood: -693439.275086 EM: Round [134] log likelihood: -693439.274704 EM: Round [135] log likelihood: -693439.274333 EM: Round [136] log likelihood: -693439.273972 EM: Round [137] log likelihood: -693439.273621 EM: Round [138] log likelihood: -693439.273280 EM: Round [139] log likelihood: -693439.272949 EM: Round [140] log likelihood: -693439.272626 EM: Round [141] log likelihood: -693439.272312 EM: Round [142] log likelihood: -693439.272007 EM: Round [143] log likelihood: -693439.271709 EM: Round [144] log likelihood: -693439.271419 EM: Round [145] log likelihood: -693439.271137 EM: Round [146] log likelihood: -693439.270862 EM: Round [147] log likelihood: -693439.270594 EM: Round [148] log likelihood: -693439.270333 EM: Round [149] log likelihood: -693439.270078 EM: Round [150] log likelihood: -693439.269830 EM: Round [151] log likelihood: -693439.269587 EM: Round [152] log likelihood: -693439.269351 EM: Round [153] log likelihood: -693439.269120 EM: Round [154] log likelihood: -693439.268895 EM: Round [155] log likelihood: -693439.268675 EM: Round [156] log likelihood: -693439.268460 EM: Round [157] log likelihood: -693439.268250 EM: Round [158] log likelihood: -693439.268045 EM: Round [159] log likelihood: -693439.267845 EM: Round [160] log likelihood: -693439.267649 EM: Round [161] log likelihood: -693439.267458 EM: Round [162] log likelihood: -693439.267271 EM: Round [163] log likelihood: -693439.267088 EM: Round [164] log likelihood: -693439.266909 EM: Round [165] log likelihood: -693439.266734 EM: Round [166] log likelihood: -693439.266563 EM: Round [167] log likelihood: -693439.266395 EM: Round [168] log likelihood: -693439.266231 EM: Round [169] log likelihood: -693439.266071 EM: Round [170] log likelihood: -693439.265914 EM: Round [171] log likelihood: -693439.265760 EM: Round [172] log likelihood: -693439.265609 EM: Round [173] log likelihood: -693439.265461 EM: Round [174] log likelihood: -693439.265317 EM: Round [175] log likelihood: -693439.265175 EM: Round [176] log likelihood: -693439.265036 EM: Round [177] log likelihood: -693439.264900 EM: Round [178] log likelihood: -693439.264766 EM: Round [179] log likelihood: -693439.264636 EM: Round [180] log likelihood: -693439.264507 EM: Round [181] log likelihood: -693439.264382 EM: Round [182] log likelihood: -693439.264258 EM: Round [183] log likelihood: -693439.264137 EM: Round [184] log likelihood: -693439.264018 EM: Round [185] log likelihood: -693439.263902 EM: Round [186] log likelihood: -693439.263788 EM: Round [187] log likelihood: -693439.263675 EM: Round [188] log likelihood: -693439.263565 EM: Round [189] log likelihood: -693439.263457 EM: Round [190] log likelihood: -693439.263351 EM: Round [191] log likelihood: -693439.263247 EM: Round [192] log likelihood: -693439.263144 EM: Round [193] log likelihood: -693439.263044 EM: Round [194] log likelihood: -693439.262945 EM: Stopping iterations at round 194 due to insufficient improvement in likelihood. CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.l3FwjedXTv/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.l3FwjedXTv/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.l3FwjedXTv/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.l3FwjedXTv/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.l3FwjedXTv/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.l3FwjedXTv/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.l3FwjedXTv/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20 CMD: cp /tmp/nxf.l3FwjedXTv/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.l3FwjedXTv/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.l3FwjedXTv/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.l3FwjedXTv/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged CMD: ln -sf /tmp/nxf.l3FwjedXTv/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.l3FwjedXTv/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered * Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.l3FwjedXTv/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 294949394 > /tmp/nxf.l3FwjedXTv/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM * Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.l3FwjedXTv/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.l3FwjedXTv/ctat_genome_lib_build_dir > /tmp/nxf.l3FwjedXTv/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.l3FwjedXTv/ctat_genome_lib_build_dir --annotate /tmp/nxf.l3FwjedXTv/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.l3FwjedXTv/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot * Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.l3FwjedXTv/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.l3FwjedXTv/ctat_genome_lib_build_dir -done, see /tmp/nxf.l3FwjedXTv/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass * Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.l3FwjedXTv/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.l3FwjedXTv/ctat_genome_lib_build_dir -filter_likely_RT_artifacts: (pass: 2020, filtered: 10738) * Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.l3FwjedXTv/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001 * Running CMD: cp /tmp/nxf.l3FwjedXTv/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv * Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.l3FwjedXTv/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000245958.6] WARNING, no entry stored in dbm for [ENSG00000234715.2] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [ENSG00000272693.4] WARNING, no entry stored in dbm for [ENSG00000229739.4] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [ENSG00000287721.1] WARNING, no entry stored in dbm for [ENSG00000282458.1] WARNING, no entry stored in dbm for [ENSG00000276758.1] WARNING, no entry stored in dbm for [ENSG00000250251.6] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [ENSG00000239268.3] WARNING, no entry stored in dbm for [ENSG00000258853.1] WARNING, no entry stored in dbm for [ENSG00000237296.9] WARNING, no entry stored in dbm for [ENSG00000224447.1] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [ENSG00000203413.3] WARNING, no entry stored in dbm for [ENSG00000254485.5] WARNING, no entry stored in dbm for [ENSG00000257403.2] WARNING, no entry stored in dbm for [ENSG00000189149.12] WARNING, no entry stored in dbm for [ENSG00000234420.7] WARNING, no entry stored in dbm for [ENSG00000250802.7] WARNING, no entry stored in dbm for [ENSG00000229891.2] WARNING, no entry stored in dbm for [ENSG00000259673.6] WARNING, no entry stored in dbm for [ENSG00000285219.2] WARNING, no entry stored in dbm for [ENSG00000254275.6] WARNING, no entry stored in dbm for [ENSG00000226049.3] WARNING, no entry stored in dbm for [ENSG00000260404.3] WARNING, no entry stored in dbm for [ENSG00000280136.2] WARNING, no entry stored in dbm for [ENSG00000181126.13] WARNING, no entry stored in dbm for [ENSG00000237238.3] WARNING, no entry stored in dbm for [ENSG00000211459.2] WARNING, no entry stored in dbm for [ENSG00000254349.6] WARNING, no entry stored in dbm for [ENSG00000271699.5] WARNING, no entry stored in dbm for [ENSG00000225292.2] WARNING, no entry stored in dbm for [ENSG00000226823.1] WARNING, no entry stored in dbm for [ENSG00000223508.5] WARNING, no entry stored in dbm for [ENSG00000204622.11] WARNING, no entry stored in dbm for [ENSG00000225851.1] WARNING, no entry stored in dbm for [ENSG00000236698.1] WARNING, no entry stored in dbm for [ENSG00000230239.1] WARNING, no entry stored in dbm for [ENSG00000230490.3] WARNING, no entry stored in dbm for [ENSG00000229930.1] WARNING, no entry stored in dbm for [ENSG00000272848.2] WARNING, no entry stored in dbm for [ENSG00000245105.4] WARNING, no entry stored in dbm for [ENSG00000234476.3] WARNING, no entry stored in dbm for [ENSG00000181126.13] WARNING, no entry stored in dbm for [ENSG00000234945.8] WARNING, no entry stored in dbm for [ENSG00000168405.17] WARNING, no entry stored in dbm for [ENSG00000243389.1] WARNING, no entry stored in dbm for [ENSG00000285756.2] WARNING, no entry stored in dbm for [ENSG00000099725.14] WARNING, no entry stored in dbm for [ENSG00000185710.9] WARNING, no entry stored in dbm for [ENSG00000239969.5] WARNING, no entry stored in dbm for [ENSG00000228546.2] WARNING, no entry stored in dbm for [ENSG00000286935.1] WARNING, no entry stored in dbm for [ENSG00000259511.3] WARNING, no entry stored in dbm for [ENSG00000225594.1] WARNING, no entry stored in dbm for [ENSG00000251003.9] WARNING, no entry stored in dbm for [ENSG00000261499.2] WARNING, no entry stored in dbm for [ENSG00000271434.3] WARNING, no entry stored in dbm for [ENSG00000158482.10] WARNING, no entry stored in dbm for [ENSG00000276822.1] WARNING, no entry stored in dbm for [ENSG00000245958.6] WARNING, no entry stored in dbm for [ENSG00000200408.1] WARNING, no entry stored in dbm for [ENSG00000200516.1] WARNING, no entry stored in dbm for [ENSG00000201059.1] WARNING, no entry stored in dbm for [ENSG00000212454.1] WARNING, no entry stored in dbm for [ENSG00000201185.1] WARNING, no entry stored in dbm for [ENSG00000202056.1] WARNING, no entry stored in dbm for [ENSG00000251823.2] WARNING, no entry stored in dbm for [ENSG00000264618.2] WARNING, no entry stored in dbm for [ENSG00000275090.1] WARNING, no entry stored in dbm for [ENSG00000242559.3] WARNING, no entry stored in dbm for [ENSG00000275090.1] WARNING, no entry stored in dbm for [ENSG00000255248.9] WARNING, no entry stored in dbm for [ENSG00000274565.1] WARNING, no entry stored in dbm for [ENSG00000231312.7] WARNING, no entry stored in dbm for [ENSG00000283196.2] WARNING, no entry stored in dbm for [ENSG00000255158.1] WARNING, no entry stored in dbm for [ENSG00000248238.2] WARNING, no entry stored in dbm for [ENSG00000236679.2] WARNING, no entry stored in dbm for [ENSG00000254859.1] WARNING, no entry stored in dbm for [ENSG00000200156.1] WARNING, no entry stored in dbm for [ENSG00000188662.6] WARNING, no entry stored in dbm for [ENSG00000240993.3] WARNING, no entry stored in dbm for [ENSG00000150175.13] WARNING, no entry stored in dbm for [ENSG00000230869.1] WARNING, no entry stored in dbm for [ENSG00000234709.2] WARNING, no entry stored in dbm for [ENSG00000261348.2] WARNING, no entry stored in dbm for [ENSG00000236397.3] WARNING, no entry stored in dbm for [ENSG00000111788.10] WARNING, no entry stored in dbm for [ENSG00000236709.1] WARNING, no entry stored in dbm for [ENSG00000230630.5] WARNING, no entry stored in dbm for [ENSG00000224750.6] WARNING, no entry stored in dbm for [ENSG00000225096.3] WARNING, no entry stored in dbm for [ENSG00000260404.3] WARNING, no entry stored in dbm for [ENSG00000235749.3] WARNING, no entry stored in dbm for [ENSG00000258028.3] WARNING, no entry stored in dbm for [ENSG00000276805.2] WARNING, no entry stored in dbm for [ENSG00000280828.1] WARNING, no entry stored in dbm for [ENSG00000288543.1] WARNING, no entry stored in dbm for [ENSG00000223959.8] WARNING, no entry stored in dbm for [ENSG00000284964.1] WARNING, no entry stored in dbm for [ENSG00000238035.8] WARNING, no entry stored in dbm for [ENSG00000284675.1] WARNING, no entry stored in dbm for [ENSG00000285106.2] WARNING, no entry stored in dbm for [ENSG00000186148.13] WARNING, no entry stored in dbm for [ENSG00000258017.2] WARNING, no entry stored in dbm for [ENSG00000257403.2] WARNING, no entry stored in dbm for [ENSG00000189149.12] WARNING, no entry stored in dbm for [ENSG00000285776.1] WARNING, no entry stored in dbm for [ENSG00000287707.1] WARNING, no entry stored in dbm for [ENSG00000204650.14] WARNING, no entry stored in dbm for [ENSG00000225264.3] WARNING, no entry stored in dbm for [ENSG00000287243.2] WARNING, no entry stored in dbm for [ENSG00000257746.2] WARNING, no entry stored in dbm for [ENSG00000224078.15] WARNING, no entry stored in dbm for [ENSG00000254453.1] WARNING, no entry stored in dbm for [ENSG00000196922.10] WARNING, no entry stored in dbm for [ENSG00000236869.1] WARNING, no entry stored in dbm for [ENSG00000253661.2] WARNING, no entry stored in dbm for [ENSG00000177410.13] WARNING, no entry stored in dbm for [ENSG00000261693.1] WARNING, no entry stored in dbm for [ENSG00000250802.7] WARNING, no entry stored in dbm for [ENSG00000229807.12] WARNING, no entry stored in dbm for [ENSG00000249947.2] WARNING, no entry stored in dbm for [ENSG00000272848.2] WARNING, no entry stored in dbm for [ENSG00000288663.1] WARNING, no entry stored in dbm for [ENSG00000235023.1] WARNING, no entry stored in dbm for [ENSG00000185596.16] WARNING, no entry stored in dbm for [ENSG00000185596.16] WARNING, no entry stored in dbm for [ENSG00000146556.14] WARNING, no entry stored in dbm for [ENSG00000234899.11] WARNING, no entry stored in dbm for [ENSG00000227759.2] WARNING, no entry stored in dbm for [ENSG00000229036.7] WARNING, no entry stored in dbm for [ENSG00000267815.1] WARNING, no entry stored in dbm for [ENSG00000255202.1] WARNING, no entry stored in dbm for [ENSG00000176728.10] WARNING, no entry stored in dbm for [ENSG00000223756.7] WARNING, no entry stored in dbm for [ENSG00000280441.3] WARNING, no entry stored in dbm for [ENSG00000280441.3] WARNING, no entry stored in dbm for [ENSG00000250857.3] WARNING, no entry stored in dbm for [ENSG00000163597.15] WARNING, no entry stored in dbm for [ENSG00000224078.15] WARNING, no entry stored in dbm for [ENSG00000221676.1] WARNING, no entry stored in dbm for [ENSG00000281741.2] WARNING, no entry stored in dbm for [ENSG00000232894.1] WARNING, no entry stored in dbm for [ENSG00000232894.1] WARNING, no entry stored in dbm for [ENSG00000286694.1] WARNING, no entry stored in dbm for [ENSG00000270141.3] WARNING, no entry stored in dbm for [ENSG00000288663.1] WARNING, no entry stored in dbm for [ENSG00000279758.1] WARNING, no entry stored in dbm for [ENSG00000215914.4] WARNING, no entry stored in dbm for [ENSG00000226383.7] WARNING, no entry stored in dbm for [ENSG00000251136.9] WARNING, no entry stored in dbm for [ENSG00000226903.2] WARNING, no entry stored in dbm for [ENSG00000264538.6] WARNING, no entry stored in dbm for [ENSG00000264538.6] WARNING, no entry stored in dbm for [ENSG00000264538.6] WARNING, no entry stored in dbm for [ENSG00000273419.1] WARNING, no entry stored in dbm for [ENSG00000234883.6] WARNING, no entry stored in dbm for [ENSG00000247708.8] WARNING, no entry stored in dbm for [ENSG00000223612.3] WARNING, no entry stored in dbm for [ENSG00000215464.4] WARNING, no entry stored in dbm for [ENSG00000260693.1] WARNING, no entry stored in dbm for [ENSG00000288091.1] WARNING, no entry stored in dbm for [ENSG00000248660.1] WARNING, no entry stored in dbm for [ENSG00000185847.8] WARNING, no entry stored in dbm for [ENSG00000274767.1] WARNING, no entry stored in dbm for [ENSG00000254681.6] WARNING, no entry stored in dbm for [ENSG00000240350.3] WARNING, no entry stored in dbm for [ENSG00000288562.1] WARNING, no entry stored in dbm for [ENSG00000224479.6] WARNING, no entry stored in dbm for [ENSG00000260482.3] WARNING, no entry stored in dbm for [ENSG00000257657.3] WARNING, no entry stored in dbm for [ENSG00000263934.5] WARNING, no entry stored in dbm for [ENSG00000269893.8] WARNING, no entry stored in dbm for [ENSG00000232956.9] WARNING, no entry stored in dbm for [ENSG00000152117.17] WARNING, no entry stored in dbm for [ENSG00000247925.2] WARNING, no entry stored in dbm for [ENSG00000180747.15] WARNING, no entry stored in dbm for [ENSG00000180747.15] WARNING, no entry stored in dbm for [ENSG00000180747.15] WARNING, no entry stored in dbm for [ENSG00000260352.1] WARNING, no entry stored in dbm for [ENSG00000268364.2] WARNING, no entry stored in dbm for [ENSG00000283426.1] WARNING, no entry stored in dbm for [ENSG00000185485.14] WARNING, no entry stored in dbm for [ENSG00000283426.1] WARNING, no entry stored in dbm for [ENSG00000283426.1] WARNING, no entry stored in dbm for [ENSG00000225689.2] WARNING, no entry stored in dbm for [ENSG00000285051.2] WARNING, no entry stored in dbm for [ENSG00000224081.9] WARNING, no entry stored in dbm for [ENSG00000286383.1] WARNING, no entry stored in dbm for [ENSG00000258957.2] WARNING, no entry stored in dbm for [ENSG00000234210.1] WARNING, no entry stored in dbm for [ENSG00000259943.1] WARNING, no entry stored in dbm for [ENSG00000177133.11] WARNING, no entry stored in dbm for [ENSG00000262801.6] WARNING, no entry stored in dbm for [ENSG00000285666.1] WARNING, no entry stored in dbm for [ENSG00000255347.1] WARNING, no entry stored in dbm for [ENSG00000264538.6] WARNING, no entry stored in dbm for [ENSG00000185485.14] WARNING, no entry stored in dbm for [ENSG00000283426.1] WARNING, no entry stored in dbm for [ENSG00000251532.1] WARNING, no entry stored in dbm for [ENSG00000249335.2] WARNING, no entry stored in dbm for [ENSG00000252010.1] WARNING, no entry stored in dbm for [ENSG00000224897.8] WARNING, no entry stored in dbm for [ENSG00000227681.5] WARNING, no entry stored in dbm for [ENSG00000260648.3] WARNING, no entry stored in dbm for [ENSG00000239269.1] WARNING, no entry stored in dbm for [ENSG00000233836.7] WARNING, no entry stored in dbm for [ENSG00000230116.1] WARNING, no entry stored in dbm for [ENSG00000196183.5] WARNING, no entry stored in dbm for [ENSG00000249906.1] WARNING, no entry stored in dbm for [ENSG00000226448.1] WARNING, no entry stored in dbm for [ENSG00000242071.3] WARNING, no entry stored in dbm for [ENSG00000242445.1] WARNING, no entry stored in dbm for [ENSG00000229757.2] WARNING, no entry stored in dbm for [ENSG00000213495.3] WARNING, no entry stored in dbm for [ENSG00000213178.3] WARNING, no entry stored in dbm for [ENSG00000218300.1] WARNING, no entry stored in dbm for [ENSG00000230559.1] WARNING, no entry stored in dbm for [ENSG00000232687.1] WARNING, no entry stored in dbm for [ENSG00000207330.1] WARNING, no entry stored in dbm for [ENSG00000199892.2] WARNING, no entry stored in dbm for [ENSG00000276047.1] WARNING, no entry stored in dbm for [ENSG00000239224.3] WARNING, no entry stored in dbm for [ENSG00000276047.1] WARNING, no entry stored in dbm for [ENSG00000275878.1] WARNING, no entry stored in dbm for [ENSG00000276047.1] WARNING, no entry stored in dbm for [ENSG00000243951.1] WARNING, no entry stored in dbm for [ENSG00000276047.1] WARNING, no entry stored in dbm for [ENSG00000275090.1] WARNING, no entry stored in dbm for [ENSG00000240457.3] WARNING, no entry stored in dbm for [ENSG00000199883.1] WARNING, no entry stored in dbm for [ENSG00000200243.1] WARNING, no entry stored in dbm for [ENSG00000200867.1] WARNING, no entry stored in dbm for [ENSG00000200867.1] WARNING, no entry stored in dbm for [ENSG00000199319.1] WARNING, no entry stored in dbm for [ENSG00000200783.1] WARNING, no entry stored in dbm for [ENSG00000200475.1] WARNING, no entry stored in dbm for [ENSG00000237997.1] WARNING, no entry stored in dbm for [ENSG00000233297.4] WARNING, no entry stored in dbm for [ENSG00000241057.2] WARNING, no entry stored in dbm for [ENSG00000259144.2] WARNING, no entry stored in dbm for [ENSG00000200434.1] WARNING, no entry stored in dbm for [ENSG00000235892.1] WARNING, no entry stored in dbm for [ENSG00000273125.2] WARNING, no entry stored in dbm for [ENSG00000225470.8] WARNING, no entry stored in dbm for [ENSG00000235244.4] WARNING, no entry stored in dbm for [ENSG00000285094.1] WARNING, no entry stored in dbm for [ENSG00000275431.1] WARNING, no entry stored in dbm for [ENSG00000275481.1] WARNING, no entry stored in dbm for [ENSG00000248927.1] WARNING, no entry stored in dbm for [ENSG00000213956.4] WARNING, no entry stored in dbm for [ENSG00000286427.1] WARNING, no entry stored in dbm for [ENSG00000272168.8] WARNING, no entry stored in dbm for [ENSG00000223779.6] WARNING, no entry stored in dbm for [ENSG00000230510.7] WARNING, no entry stored in dbm for [ENSG00000241472.7] WARNING, no entry stored in dbm for [ENSG00000240392.1] WARNING, no entry stored in dbm for [ENSG00000242729.1] WARNING, no entry stored in dbm for [ENSG00000230305.2] WARNING, no entry stored in dbm for [ENSG00000078319.10] WARNING, no entry stored in dbm for [ENSG00000259669.6] WARNING, no entry stored in dbm for [ENSG00000230869.1] WARNING, no entry stored in dbm for [ENSG00000183458.14] WARNING, no entry stored in dbm for [ENSG00000260285.1] WARNING, no entry stored in dbm for [ENSG00000279491.1] WARNING, no entry stored in dbm for [ENSG00000228876.4] WARNING, no entry stored in dbm for [ENSG00000287326.1] WARNING, no entry stored in dbm for [ENSG00000255185.6] WARNING, no entry stored in dbm for [ENSG00000215302.8] WARNING, no entry stored in dbm for [ENSG00000231551.8] WARNING, no entry stored in dbm for [ENSG00000231551.8] WARNING, no entry stored in dbm for [ENSG00000261377.5] WARNING, no entry stored in dbm for [ENSG00000287519.1] WARNING, no entry stored in dbm for [ENSG00000271382.1] WARNING, no entry stored in dbm for [ENSG00000281880.2] WARNING, no entry stored in dbm for [ENSG00000217315.1] WARNING, no entry stored in dbm for [ENSG00000260005.6] WARNING, no entry stored in dbm for [ENSG00000241472.7] WARNING, no entry stored in dbm for [ENSG00000226328.7] WARNING, no entry stored in dbm for [ENSG00000259884.1] WARNING, no entry stored in dbm for [ENSG00000259275.4] WARNING, no entry stored in dbm for [ENSG00000259673.6] WARNING, no entry stored in dbm for [ENSG00000250114.1] WARNING, no entry stored in dbm for [ENSG00000285219.2] WARNING, no entry stored in dbm for [ENSG00000285219.2] WARNING, no entry stored in dbm for [ENSG00000263276.1] WARNING, no entry stored in dbm for [ENSG00000266877.1] WARNING, no entry stored in dbm for [ENSG00000225715.1] WARNING, no entry stored in dbm for [ENSG00000277053.4] WARNING, no entry stored in dbm for [ENSG00000231920.1] WARNING, no entry stored in dbm for [ENSG00000222604.2] WARNING, no entry stored in dbm for [ENSG00000258137.5] WARNING, no entry stored in dbm for [ENSG00000277876.1] WARNING, no entry stored in dbm for [ENSG00000287291.1] WARNING, no entry stored in dbm for [ENSG00000249684.6] WARNING, no entry stored in dbm for [ENSG00000267858.6] WARNING, no entry stored in dbm for [ENSG00000262445.3] WARNING, no entry stored in dbm for [ENSG00000177640.16] WARNING, no entry stored in dbm for [ENSG00000283426.1] WARNING, no entry stored in dbm for [ENSG00000185485.14] WARNING, no entry stored in dbm for [ENSG00000210112.1] WARNING, no entry stored in dbm for [ENSG00000214955.5] WARNING, no entry stored in dbm for [ENSG00000214955.5] WARNING, no entry stored in dbm for [ENSG00000228903.7] WARNING, no entry stored in dbm for [ENSG00000197182.14] WARNING, no entry stored in dbm for [ENSG00000283805.1] WARNING, no entry stored in dbm for [ENSG00000172965.17] WARNING, no entry stored in dbm for [ENSG00000233325.3] WARNING, no entry stored in dbm for [ENSG00000230569.1] WARNING, no entry stored in dbm for [ENSG00000229807.12] WARNING, no entry stored in dbm for [ENSG00000225746.13] WARNING, no entry stored in dbm for [ENSG00000269904.2] WARNING, no entry stored in dbm for [ENSG00000225022.1] WARNING, no entry stored in dbm for [ENSG00000253320.7] WARNING, no entry stored in dbm for [ENSG00000272142.4] WARNING, no entry stored in dbm for [ENSG00000280171.1] WARNING, no entry stored in dbm for [ENSG00000259416.2] WARNING, no entry stored in dbm for [ENSG00000272381.2] WARNING, no entry stored in dbm for [ENSG00000226791.7] WARNING, no entry stored in dbm for [ENSG00000257048.1] WARNING, no entry stored in dbm for [ENSG00000232190.3] WARNING, no entry stored in dbm for [ENSG00000234663.7] WARNING, no entry stored in dbm for [ENSG00000259439.2] WARNING, no entry stored in dbm for [ENSG00000228482.2] WARNING, no entry stored in dbm for [ENSG00000232624.8] WARNING, no entry stored in dbm for [ENSG00000223704.2] WARNING, no entry stored in dbm for [ENSG00000238113.7] WARNING, no entry stored in dbm for [ENSG00000203650.9] WARNING, no entry stored in dbm for [ENSG00000247157.7] WARNING, no entry stored in dbm for [ENSG00000265843.3] WARNING, no entry stored in dbm for [ENSG00000204054.14] WARNING, no entry stored in dbm for [ENSG00000225269.3] WARNING, no entry stored in dbm for [ENSG00000228221.6] WARNING, no entry stored in dbm for [ENSG00000223685.6] WARNING, no entry stored in dbm for [ENSG00000232931.6] WARNING, no entry stored in dbm for [ENSG00000203809.7] WARNING, no entry stored in dbm for [ENSG00000226696.6] WARNING, no entry stored in dbm for [ENSG00000176320.2] WARNING, no entry stored in dbm for [ENSG00000287581.1] WARNING, no entry stored in dbm for [ENSG00000275857.1] WARNING, no entry stored in dbm for [ENSG00000215819.3] WARNING, no entry stored in dbm for [ENSG00000253773.3] WARNING, no entry stored in dbm for [ENSG00000250686.2] WARNING, no entry stored in dbm for [ENSG00000206573.9] WARNING, no entry stored in dbm for [ENSG00000260776.6] WARNING, no entry stored in dbm for [ENSG00000197536.11] WARNING, no entry stored in dbm for [ENSG00000254034.2] WARNING, no entry stored in dbm for [ENSG00000226942.2] WARNING, no entry stored in dbm for [ENSG00000270864.1] WARNING, no entry stored in dbm for [ENSG00000261834.2] WARNING, no entry stored in dbm for [ENSG00000268621.6] WARNING, no entry stored in dbm for [ENSG00000255733.6] WARNING, no entry stored in dbm for [ENSG00000246695.8] WARNING, no entry stored in dbm for [ENSG00000181984.11] WARNING, no entry stored in dbm for [ENSG00000227733.10] WARNING, no entry stored in dbm for [ENSG00000285219.2] WARNING, no entry stored in dbm for [ENSG00000258650.1] WARNING, no entry stored in dbm for [ENSG00000166530.8] WARNING, no entry stored in dbm for [ENSG00000253774.1] WARNING, no entry stored in dbm for [ENSG00000231721.7] WARNING, no entry stored in dbm for [ENSG00000251400.1] WARNING, no entry stored in dbm for [ENSG00000278041.1] WARNING, no entry stored in dbm for [ENSG00000213244.3] WARNING, no entry stored in dbm for [ENSG00000287646.1] WARNING, no entry stored in dbm for [ENSG00000206417.8] WARNING, no entry stored in dbm for [ENSG00000224458.3] WARNING, no entry stored in dbm for [ENSG00000234353.2] WARNING, no entry stored in dbm for [ENSG00000198237.8] WARNING, no entry stored in dbm for [ENSG00000250900.6] WARNING, no entry stored in dbm for [ENSG00000250900.6] WARNING, no entry stored in dbm for [ENSG00000232725.1] WARNING, no entry stored in dbm for [ENSG00000234696.1] WARNING, no entry stored in dbm for [ENSG00000223820.5] WARNING, no entry stored in dbm for [ENSG00000271333.1] WARNING, no entry stored in dbm for [ENSG00000259663.2] WARNING, no entry stored in dbm for [ENSG00000250903.9] WARNING, no entry stored in dbm for [ENSG00000131797.12] WARNING, no entry stored in dbm for [ENSG00000282572.2] WARNING, no entry stored in dbm for [ENSG00000244300.3] WARNING, no entry stored in dbm for [ENSG00000239351.1] WARNING, no entry stored in dbm for [ENSG00000260377.1] WARNING, no entry stored in dbm for [ENSG00000273018.7] WARNING, no entry stored in dbm for [ENSG00000200156.1] WARNING, no entry stored in dbm for [ENSG00000200972.1] WARNING, no entry stored in dbm for [ENSG00000199568.1] WARNING, no entry stored in dbm for [ENSG00000088340.17] WARNING, no entry stored in dbm for [ENSG00000088340.17] WARNING, no entry stored in dbm for [ENSG00000223652.2] WARNING, no entry stored in dbm for [ENSG00000251600.8] WARNING, no entry stored in dbm for [ENSG00000204934.10] WARNING, no entry stored in dbm for [ENSG00000236056.1] WARNING, no entry stored in dbm for [ENSG00000286021.2] WARNING, no entry stored in dbm for [ENSG00000236438.7] WARNING, no entry stored in dbm for [ENSG00000237870.6] WARNING, no entry stored in dbm for [ENSG00000261211.1] WARNING, no entry stored in dbm for [ENSG00000229770.2] WARNING, no entry stored in dbm for [ENSG00000078319.10] WARNING, no entry stored in dbm for [ENSG00000251504.1] WARNING, no entry stored in dbm for [ENSG00000234359.3] WARNING, no entry stored in dbm for [ENSG00000186704.9] WARNING, no entry stored in dbm for [ENSG00000246316.8] WARNING, no entry stored in dbm for [ENSG00000255390.1] WARNING, no entry stored in dbm for [ENSG00000224165.6] WARNING, no entry stored in dbm for [ENSG00000286183.1] WARNING, no entry stored in dbm for [ENSG00000256441.1] WARNING, no entry stored in dbm for [ENSG00000280407.2] WARNING, no entry stored in dbm for [ENSG00000279259.1] WARNING, no entry stored in dbm for [ENSG00000260261.2] WARNING, no entry stored in dbm for [ENSG00000241416.1] WARNING, no entry stored in dbm for [ENSG00000235244.4] WARNING, no entry stored in dbm for [ENSG00000235244.4] WARNING, no entry stored in dbm for [ENSG00000235033.7] WARNING, no entry stored in dbm for [ENSG00000283057.1] WARNING, no entry stored in dbm for [ENSG00000286458.1] WARNING, no entry stored in dbm for [ENSG00000232973.13] WARNING, no entry stored in dbm for [ENSG00000223874.2] WARNING, no entry stored in dbm for [ENSG00000225470.8] WARNING, no entry stored in dbm for [ENSG00000279249.3] WARNING, no entry stored in dbm for [ENSG00000283541.1] WARNING, no entry stored in dbm for [ENSG00000267312.1] WARNING, no entry stored in dbm for [ENSG00000218890.1] WARNING, no entry stored in dbm for [ENSG00000267506.5] WARNING, no entry stored in dbm for [ENSG00000235485.1] WARNING, no entry stored in dbm for [ENSG00000227036.8] WARNING, no entry stored in dbm for [ENSG00000186162.10] WARNING, no entry stored in dbm for [ENSG00000202296.1] WARNING, no entry stored in dbm for [ENSG00000271064.1] WARNING, no entry stored in dbm for [ENSG00000272888.7] WARNING, no entry stored in dbm for [ENSG00000287700.1] WARNING, no entry stored in dbm for [ENSG00000256625.1] WARNING, no entry stored in dbm for [ENSG00000204055.5] WARNING, no entry stored in dbm for [ENSG00000223773.7] WARNING, no entry stored in dbm for [ENSG00000274698.1] WARNING, no entry stored in dbm for [ENSG00000230487.8] WARNING, no entry stored in dbm for [ENSG00000215302.8] WARNING, no entry stored in dbm for [ENSG00000288044.1] WARNING, no entry stored in dbm for [ENSG00000235574.1] WARNING, no entry stored in dbm for [ENSG00000226950.8] WARNING, no entry stored in dbm for [ENSG00000269524.1] WARNING, no entry stored in dbm for [ENSG00000215302.8] WARNING, no entry stored in dbm for [ENSG00000196796.5] WARNING, no entry stored in dbm for [ENSG00000226800.5] WARNING, no entry stored in dbm for [ENSG00000205549.10] WARNING, no entry stored in dbm for [ENSG00000188511.12] WARNING, no entry stored in dbm for [ENSG00000283003.2] WARNING, no entry stored in dbm for [ENSG00000285756.2] WARNING, no entry stored in dbm for [ENSG00000285756.2] WARNING, no entry stored in dbm for [ENSG00000213820.3] WARNING, no entry stored in dbm for [ENSG00000233259.4] WARNING, no entry stored in dbm for [ENSG00000228793.2] WARNING, no entry stored in dbm for [ENSG00000226913.2] WARNING, no entry stored in dbm for [ENSG00000270025.2] WARNING, no entry stored in dbm for [ENSG00000243289.1] WARNING, no entry stored in dbm for [ENSG00000236794.5] WARNING, no entry stored in dbm for [ENSG00000229533.1] WARNING, no entry stored in dbm for [ENSG00000287763.1] WARNING, no entry stored in dbm for [ENSG00000255545.8] WARNING, no entry stored in dbm for [ENSG00000285331.2] WARNING, no entry stored in dbm for [ENSG00000226592.1] WARNING, no entry stored in dbm for [ENSG00000227883.1] WARNING, no entry stored in dbm for [ENSG00000278175.4] WARNING, no entry stored in dbm for [ENSG00000225649.6] WARNING, no entry stored in dbm for [ENSG00000235919.4] WARNING, no entry stored in dbm for [ENSG00000231133.8] WARNING, no entry stored in dbm for [ENSG00000260896.6] WARNING, no entry stored in dbm for [ENSG00000228495.2] WARNING, no entry stored in dbm for [ENSG00000244198.7] WARNING, no entry stored in dbm for [ENSG00000227081.5] WARNING, no entry stored in dbm for [ENSG00000284639.1] WARNING, no entry stored in dbm for [ENSG00000241549.8] WARNING, no entry stored in dbm for [ENSG00000256591.5] WARNING, no entry stored in dbm for [ENSG00000266373.1] WARNING, no entry stored in dbm for [ENSG00000253282.1] WARNING, no entry stored in dbm for [ENSG00000246889.2] WARNING, no entry stored in dbm for [ENSG00000272578.5] WARNING, no entry stored in dbm for [ENSG00000266754.2] WARNING, no entry stored in dbm for [ENSG00000266754.2] WARNING, no entry stored in dbm for [ENSG00000215067.10] WARNING, no entry stored in dbm for [ENSG00000235085.3] WARNING, no entry stored in dbm for [ENSG00000226899.1] WARNING, no entry stored in dbm for [ENSG00000234712.1] WARNING, no entry stored in dbm for [ENSG00000258740.1] WARNING, no entry stored in dbm for [ENSG00000225643.1] WARNING, no entry stored in dbm for [ENSG00000234160.1] WARNING, no entry stored in dbm for [ENSG00000275198.1] WARNING, no entry stored in dbm for [ENSG00000225096.3] WARNING, no entry stored in dbm for [ENSG00000226465.3] WARNING, no entry stored in dbm for [ENSG00000286313.1] WARNING, no entry stored in dbm for [ENSG00000287354.1] WARNING, no entry stored in dbm for [ENSG00000234156.3] WARNING, no entry stored in dbm for [ENSG00000233721.1] WARNING, no entry stored in dbm for [ENSG00000231616.9] WARNING, no entry stored in dbm for [ENSG00000237153.4] WARNING, no entry stored in dbm for [ENSG00000243155.1] WARNING, no entry stored in dbm for [ENSG00000286428.1] WARNING, no entry stored in dbm for [ENSG00000271155.1] WARNING, no entry stored in dbm for [ENSG00000277741.4] WARNING, no entry stored in dbm for [ENSG00000228830.1] WARNING, no entry stored in dbm for [ENSG00000280739.3] WARNING, no entry stored in dbm for [ENSG00000287126.1] WARNING, no entry stored in dbm for [ENSG00000273523.1] WARNING, no entry stored in dbm for [ENSG00000233379.2] WARNING, no entry stored in dbm for [ENSG00000258727.1] WARNING, no entry stored in dbm for [ENSG00000219682.4] WARNING, no entry stored in dbm for [ENSG00000260711.2] WARNING, no entry stored in dbm for [ENSG00000231113.2] WARNING, no entry stored in dbm for [ENSG00000224424.8] WARNING, no entry stored in dbm for [ENSG00000229425.3] WARNING, no entry stored in dbm for [ENSG00000265018.6] WARNING, no entry stored in dbm for [ENSG00000204177.10] WARNING, no entry stored in dbm for [ENSG00000230869.1] WARNING, no entry stored in dbm for [ENSG00000231304.2] WARNING, no entry stored in dbm for [ENSG00000250331.2] WARNING, no entry stored in dbm for [ENSG00000270123.4] WARNING, no entry stored in dbm for [ENSG00000232677.9] WARNING, no entry stored in dbm for [ENSG00000224016.2] WARNING, no entry stored in dbm for [ENSG00000177173.5] WARNING, no entry stored in dbm for [ENSG00000253853.3] WARNING, no entry stored in dbm for [ENSG00000238039.1] WARNING, no entry stored in dbm for [ENSG00000284964.1] WARNING, no entry stored in dbm for [ENSG00000278182.1] WARNING, no entry stored in dbm for [ENSG00000203825.4] WARNING, no entry stored in dbm for [ENSG00000272150.5] WARNING, no entry stored in dbm for [ENSG00000233585.2] WARNING, no entry stored in dbm for [ENSG00000282572.2] WARNING, no entry stored in dbm for [ENSG00000275976.5] WARNING, no entry stored in dbm for [ENSG00000274373.1] WARNING, no entry stored in dbm for [ENSG00000262413.1] WARNING, no entry stored in dbm for [ENSG00000179755.3] WARNING, no entry stored in dbm for [ENSG00000214135.8] WARNING, no entry stored in dbm for [ENSG00000214999.3] WARNING, no entry stored in dbm for [ENSG00000283345.1] WARNING, no entry stored in dbm for [ENSG00000215302.8] WARNING, no entry stored in dbm for [ENSG00000215302.8] WARNING, no entry stored in dbm for [ENSG00000215302.8] WARNING, no entry stored in dbm for [ENSG00000259639.6] WARNING, no entry stored in dbm for [ENSG00000215302.8] WARNING, no entry stored in dbm for [ENSG00000248634.1] WARNING, no entry stored in dbm for [ENSG00000260261.2] WARNING, no entry stored in dbm for [ENSG00000286103.1] WARNING, no entry stored in dbm for [ENSG00000268081.1] WARNING, no entry stored in dbm for [ENSG00000287707.1] WARNING, no entry stored in dbm for [ENSG00000248376.2] WARNING, no entry stored in dbm for [ENSG00000224479.6] WARNING, no entry stored in dbm for [ENSG00000251314.2] WARNING, no entry stored in dbm for [ENSG00000254035.1] WARNING, no entry stored in dbm for [ENSG00000255462.1] WARNING, no entry stored in dbm for [ENSG00000285108.1] WARNING, no entry stored in dbm for [ENSG00000282375.1] WARNING, no entry stored in dbm for [ENSG00000228981.3] WARNING, no entry stored in dbm for [ENSG00000242396.1] WARNING, no entry stored in dbm for [ENSG00000233184.7] WARNING, no entry stored in dbm for [ENSG00000230773.9] WARNING, no entry stored in dbm for [ENSG00000225209.2] WARNING, no entry stored in dbm for [ENSG00000261356.2] WARNING, no entry stored in dbm for [ENSG00000240519.1] WARNING, no entry stored in dbm for [ENSG00000218175.2] WARNING, no entry stored in dbm for [ENSG00000258676.5] WARNING, no entry stored in dbm for [ENSG00000239969.5] WARNING, no entry stored in dbm for [ENSG00000228546.2] WARNING, no entry stored in dbm for [ENSG00000267198.1] WARNING, no entry stored in dbm for [ENSG00000131484.4] WARNING, no entry stored in dbm for [ENSG00000259755.1] WARNING, no entry stored in dbm for [ENSG00000213753.11] WARNING, no entry stored in dbm for [ENSG00000204745.4] WARNING, no entry stored in dbm for [ENSG00000266931.2] WARNING, no entry stored in dbm for [ENSG00000240207.7] WARNING, no entry stored in dbm for [ENSG00000272368.2] WARNING, no entry stored in dbm for [ENSG00000288663.1] WARNING, no entry stored in dbm for [ENSG00000288663.1] WARNING, no entry stored in dbm for [ENSG00000234129.8] WARNING, no entry stored in dbm for [ENSG00000254789.3] WARNING, no entry stored in dbm for [ENSG00000223691.1] WARNING, no entry stored in dbm for [ENSG00000286090.1] WARNING, no entry stored in dbm for [ENSG00000261386.2] WARNING, no entry stored in dbm for [ENSG00000223703.1] WARNING, no entry stored in dbm for [ENSG00000267040.6] WARNING, no entry stored in dbm for [ENSG00000261789.1] WARNING, no entry stored in dbm for [ENSG00000254444.1] WARNING, no entry stored in dbm for [ENSG00000272140.2] WARNING, no entry stored in dbm for [ENSG00000268093.1] WARNING, no entry stored in dbm for [ENSG00000267169.2] WARNING, no entry stored in dbm for [ENSG00000240418.1] WARNING, no entry stored in dbm for [ENSG00000279569.1] WARNING, no entry stored in dbm for [ENSG00000279569.1] WARNING, no entry stored in dbm for [ENSG00000231290.6] WARNING, no entry stored in dbm for [ENSG00000264920.2] WARNING, no entry stored in dbm for [ENSG00000285106.2] WARNING, no entry stored in dbm for [ENSG00000212978.6] WARNING, no entry stored in dbm for [ENSG00000218175.2] WARNING, no entry stored in dbm for [ENSG00000267605.7] WARNING, no entry stored in dbm for [ENSG00000267605.7] WARNING, no entry stored in dbm for [ENSG00000288604.1] WARNING, no entry stored in dbm for [ENSG00000232386.9] WARNING, no entry stored in dbm for [ENSG00000232386.9] WARNING, no entry stored in dbm for [ENSG00000197813.6] WARNING, no entry stored in dbm for [ENSG00000197813.6] WARNING, no entry stored in dbm for [ENSG00000287963.1] WARNING, no entry stored in dbm for [ENSG00000111788.10] WARNING, no entry stored in dbm for [ENSG00000216895.9] WARNING, no entry stored in dbm for [ENSG00000259933.6] WARNING, no entry stored in dbm for [ENSG00000276548.1] WARNING, no entry stored in dbm for [ENSG00000158482.10] WARNING, no entry stored in dbm for [ENSG00000257403.2] WARNING, no entry stored in dbm for [ENSG00000261273.1] WARNING, no entry stored in dbm for [ENSG00000277458.1] WARNING, no entry stored in dbm for [ENSG00000271699.5] WARNING, no entry stored in dbm for [ENSG00000223544.1] WARNING, no entry stored in dbm for [ENSG00000267218.2] WARNING, no entry stored in dbm for [ENSG00000230305.2] WARNING, no entry stored in dbm for [ENSG00000239969.5] WARNING, no entry stored in dbm for [ENSG00000241057.2] WARNING, no entry stored in dbm for [ENSG00000239556.4] WARNING, no entry stored in dbm for [ENSG00000254610.3] WARNING, no entry stored in dbm for [ENSG00000273819.1] WARNING, no entry stored in dbm for [ENSG00000277283.1] WARNING, no entry stored in dbm for [ENSG00000267698.1] WARNING, no entry stored in dbm for [ENSG00000272140.2] WARNING, no entry stored in dbm for [ENSG00000249898.8] WARNING, no entry stored in dbm for [ENSG00000257759.2] WARNING, no entry stored in dbm for [ENSG00000242315.3] WARNING, no entry stored in dbm for [ENSG00000240877.3] WARNING, no entry stored in dbm for [ENSG00000244112.3] * STAR-Fusion complete. See output: /tmp/nxf.l3FwjedXTv/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)