AIH curated blacklist: matched 9 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 242
Pass (FILTER=PASS): 13 (5.4%)
Fail (FILTER=FAIL): 229 (94.6%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 9
All 9 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 97
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 33
confidence_below_min(low<high): 12
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 12
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 11
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 10
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 8
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 7
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 5
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 5
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 5
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 4
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 4
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 4
confidence_below_min(medium<high);aih_curated_blacklist: 3
Breakdown by confidence:
high: 13 pass, 1 fail (total: 14)
low: 0 pass, 95 fail (total: 95)
medium: 0 pass, 133 fail (total: 133)
Arriba filter: 242 rows -> 13 PASS; wrote 659_cfy-T1-TRNA-1_B23MHV2LT4_1.arriba.fusions.filtered.tsv and 659_cfy-T1-TRNA-1_B23MHV2LT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: 659_cfy-T1-TRNA-1_B23MHV2LT4_1.arriba.fusions.filter_summary.txt