Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7c/21228dce34fdc0d14cf2a71f99861f/659_cYf-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e9/f6f8788d6c8964893c7cf53c3ce109/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e9/f6f8788d6c8964893c7cf53c3ce109/.command.run
==> STAGING COMPLETE (3 inputs)

PAIRED_END_BAM_INPUT
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Processed 588000000 records
paired = 291126359
unpaired = 6282327
MERGED PAIRED END READS = 291126359
MATES PROCESSED = 588535045
TOTAL READS     = 297408686
DISTINCT READS  = 1.24542e+08
DISTINCT COUNTS = 1494
MAX COUNT       = 1422897
COUNTS OF 1     = 6.52805e+07
MAX TERMS       = 100
OBSERVED COUNTS (1422898)
1	65280516
2	28561610
3	13267479
4	6558509
5	3511373
6	2038326
7	1278137
8	852462
9	599688
10	438517
11	329988
12	256398
13	203914
14	164652
15	135557
16	112605
17	94780
18	80465
19	69342
20	60102
21	52096
22	45615
23	40322
24	35840
25	31931
26	29102
27	25948
28	23411
29	21204
30	18991
31	17896
32	16320
33	14762
34	13659
35	12653
36	11555
37	10690
38	9928
39	9251
40	8589
41	8058
42	7463
43	7243
44	6670
45	6273
46	5963
47	5625
48	5132
49	5082
50	4656
51	4413
52	4364
53	3961
54	3826
55	3563
56	3381
57	3199
58	3073
59	3046
60	2906
61	2752
62	2671
63	2520
64	2423
65	2257
66	2172
67	2055
68	2065
69	1904
70	1884
71	1746
72	1781
73	1699
74	1613
75	1521
76	1524
77	1480
78	1462
79	1382
80	1290
81	1218
82	1196
83	1191
84	1223
85	1123
86	1039
87	1094
88	1011
89	1025
90	933
91	927
92	862
93	847
94	836
95	809
96	826
97	757
98	795
99	777
100	723
101	688
102	673
103	682
104	655
105	656
106	662
107	594
108	598
109	580
110	579
111	538
112	540
113	531
114	524
115	494
116	451
117	507
118	485
119	460
120	458
121	427
122	387
123	397
124	400
125	394
126	426
127	385
128	385
129	339
130	364
131	356
132	361
133	349
134	299
135	313
136	329
137	332
138	324
139	303
140	278
141	277
142	301
143	287
144	271
145	246
146	261
147	253
148	246
149	234
150	291
151	264
152	218
153	234
154	237
155	227
156	234
157	247
158	234
159	185
160	208
161	208
162	169
163	194
164	208
165	191
166	184
167	168
168	166
169	196
170	177
171	168
172	188
173	183
174	166
175	143
176	171
177	154
178	154
179	151
180	160
181	138
182	159
183	136
184	135
185	149
186	141
187	137
188	125
189	159
190	142
191	125
192	133
193	141
194	125
195	118
196	127
197	129
198	132
199	131
200	119
201	110
202	111
203	110
204	116
205	100
206	109
207	134
208	95
209	108
210	87
211	92
212	108
213	80
214	107
215	91
216	103
217	90
218	91
219	91
220	96
221	81
222	88
223	61
224	91
225	101
226	84
227	78
228	78
229	79
230	68
231	71
232	66
233	70
234	57
235	77
236	66
237	68
238	69
239	80
240	69
241	67
242	73
243	60
244	58
245	73
246	63
247	75
248	70
249	64
250	60
251	46
252	49
253	76
254	68
255	40
256	66
257	55
258	69
259	58
260	53
261	73
262	58
263	54
264	54
265	53
266	56
267	48
268	41
269	47
270	54
271	53
272	68
273	50
274	45
275	49
276	40
277	49
278	52
279	49
280	37
281	48
282	38
283	41
284	51
285	35
286	50
287	51
288	57
289	35
290	45
291	42
292	41
293	45
294	36
295	42
296	44
297	41
298	59
299	35
300	40
301	29
302	49
303	29
304	42
305	42
306	37
307	35
308	34
309	23
310	37
311	39
312	35
313	35
314	39
315	27
316	24
317	40
318	38
319	30
320	36
321	38
322	24
323	28
324	32
325	21
326	33
327	37
328	25
329	30
330	30
331	40
332	33
333	27
334	33
335	33
336	26
337	29
338	28
339	39
340	31
341	29
342	30
343	20
344	32
345	22
346	17
347	29
348	32
349	35
350	38
351	22
352	17
353	19
354	30
355	29
356	23
357	21
358	28
359	21
360	26
361	24
362	22
363	27
364	27
365	21
366	19
367	28
368	14
369	19
370	27
371	16
372	21
373	18
374	26
375	16
376	28
377	27
378	15
379	19
380	20
381	22
382	20
383	19
384	22
385	21
386	25
387	16
388	22
389	19
390	14
391	20
392	18
393	18
394	21
395	24
396	20
397	24
398	11
399	18
400	13
401	21
402	14
403	12
404	18
405	12
406	14
407	13
408	19
409	25
410	20
411	21
412	11
413	20
414	17
415	20
416	20
417	13
418	17
419	18
420	11
421	14
422	13
423	13
424	19
425	13
426	10
427	15
428	11
429	12
430	17
431	11
432	7
433	14
434	18
435	13
436	15
437	10
438	14
439	12
440	8
441	14
442	17
443	13
444	9
445	18
446	14
447	13
448	13
449	12
450	20
451	11
452	13
453	12
454	13
455	13
456	11
457	14
458	10
459	15
460	20
461	13
462	16
463	12
464	9
465	10
466	20
467	14
468	7
469	10
470	10
471	16
472	17
473	7
474	9
475	7
476	9
477	7
478	12
479	8
480	11
481	9
482	8
483	9
484	10
485	15
486	14
487	13
488	11
489	9
490	17
491	8
492	15
493	6
494	14
495	9
496	12
497	11
498	9
499	7
500	9
501	19
502	9
503	14
504	14
505	8
506	12
507	6
508	12
509	8
510	9
511	7
512	8
513	12
514	9
515	6
516	4
517	6
518	7
519	11
520	11
521	8
522	10
523	10
524	8
525	12
526	12
527	8
528	8
529	7
530	8
531	7
532	8
533	5
534	8
535	4
536	4
537	16
538	5
539	10
540	4
541	10
542	8
543	6
544	9
545	8
546	6
547	5
548	5
549	7
550	10
551	10
552	7
553	5
554	9
555	4
556	10
557	4
558	3
559	5
560	5
561	10
562	6
563	6
564	8
565	4
566	11
567	9
568	6
569	9
570	9
571	7
572	7
573	9
574	2
575	6
576	6
577	2
578	7
579	9
580	6
581	5
582	8
583	6
584	3
585	5
586	2
587	7
588	6
589	10
590	5
591	8
592	5
593	8
594	2
595	6
596	7
597	7
598	4
599	7
600	13
601	4
602	5
603	6
604	6
605	7
606	8
607	1
608	4
609	8
610	6
611	5
612	5
613	3
614	7
615	4
616	7
617	5
618	7
619	5
620	5
621	5
622	8
623	7
624	7
625	10
626	3
627	4
628	3
629	9
630	6
631	8
632	6
633	9
634	4
635	6
636	7
637	2
638	2
639	3
640	6
641	4
642	4
643	4
644	5
645	3
646	6
647	8
648	4
649	8
650	5
651	3
652	3
653	3
654	5
655	3
656	2
657	3
658	7
659	4
660	13
661	5
662	8
663	2
664	4
665	4
666	5
667	2
668	1
669	5
670	2
671	4
672	1
673	2
674	5
675	4
676	6
677	4
678	3
679	3
680	3
681	4
682	2
683	5
684	7
685	4
686	1
687	8
688	3
689	2
690	5
691	2
692	2
693	5
694	1
695	5
696	11
697	4
698	3
699	3
700	7
701	3
702	2
703	4
704	4
705	4
706	2
707	3
708	6
709	5
710	5
711	5
712	1
713	6
714	5
715	3
716	2
717	4
718	2
719	5
720	4
721	7
722	2
723	2
724	3
725	4
726	4
727	1
728	3
729	3
730	2
731	4
732	3
733	3
734	6
735	4
736	4
737	4
738	1
739	3
740	3
741	4
742	4
743	3
744	1
745	1
746	2
747	6
748	9
749	1
750	9
751	2
752	3
753	4
754	5
755	4
756	5
758	6
759	5
760	4
761	3
762	4
763	2
764	6
765	1
766	2
767	2
768	6
769	2
770	1
771	3
772	2
773	3
774	4
775	5
776	3
777	6
778	2
779	1
780	1
781	1
782	2
784	4
785	2
786	2
787	1
788	2
789	4
790	2
791	3
792	3
793	1
794	2
795	2
796	4
797	4
798	5
799	5
800	1
801	3
802	4
803	2
804	2
805	1
806	3
807	1
808	1
810	1
811	5
812	1
814	3
815	2
816	4
817	2
818	1
819	3
820	1
821	1
822	5
823	5
824	2
825	5
826	1
827	4
828	4
829	3
830	6
831	3
832	3
833	3
834	1
835	3
836	3
837	3
838	1
839	2
840	2
841	2
842	1
843	2
844	6
845	3
846	5
847	1
848	3
849	1
850	5
851	2
852	3
853	1
854	3
855	1
856	4
857	2
858	1
859	2
860	1
861	1
862	2
864	4
866	2
867	2
868	4
869	1
870	3
871	2
872	4
873	2
874	2
875	3
877	4
878	4
879	1
881	5
883	2
884	1
885	3
886	3
888	2
889	2
890	2
891	2
892	1
893	1
895	4
896	2
898	1
899	1
900	2
901	1
902	2
903	1
904	5
905	1
908	3
909	4
911	1
912	4
913	2
914	1
915	4
916	1
917	4
920	2
921	2
923	2
924	2
925	1
926	1
928	2
929	1
930	1
931	1
932	2
934	1
935	2
937	1
940	2
941	2
942	1
943	1
945	3
946	4
949	4
951	1
952	2
953	2
954	2
955	5
956	2
957	1
959	2
960	1
961	2
963	1
964	1
965	3
966	1
967	2
969	2
970	1
971	1
973	1
975	2
976	1
977	1
979	1
981	2
984	1
985	2
986	2
987	2
988	2
990	1
991	3
992	2
994	2
995	1
996	4
997	2
999	1
1001	1
1002	1
1003	1
1004	1
1005	1
1006	1
1007	2
1010	1
1011	1
1013	1
1014	2
1015	1
1016	3
1017	2
1019	1
1020	1
1022	2
1023	1
1024	3
1026	2
1027	2
1028	6
1029	2
1031	1
1034	3
1035	2
1036	1
1038	1
1039	1
1041	1
1042	3
1045	1
1046	2
1048	1
1049	1
1052	2
1054	1
1055	1
1056	1
1058	1
1059	2
1060	1
1061	1
1062	2
1063	5
1064	1
1065	2
1066	3
1068	1
1069	1
1070	1
1071	1
1073	2
1074	1
1075	2
1076	1
1078	2
1080	1
1082	3
1083	2
1085	3
1086	3
1089	2
1090	1
1091	2
1092	2
1094	1
1099	1
1100	2
1101	1
1103	2
1107	1
1108	1
1109	1
1110	2
1111	2
1113	1
1116	3
1117	1
1119	1
1121	1
1122	2
1123	2
1124	1
1125	1
1126	2
1127	1
1129	3
1130	1
1131	1
1132	3
1134	2
1136	1
1137	1
1138	1
1139	1
1140	1
1141	1
1143	1
1145	2
1147	1
1148	1
1149	1
1150	1
1155	2
1157	1
1158	1
1159	1
1161	1
1162	4
1163	1
1165	2
1166	2
1168	1
1169	2
1172	3
1173	2
1174	1
1176	1
1178	2
1179	1
1180	1
1181	1
1183	2
1184	2
1185	2
1191	1
1193	1
1194	1
1196	2
1197	1
1198	1
1200	2
1201	1
1203	2
1204	2
1206	1
1207	2
1208	2
1212	1
1214	1
1215	1
1216	2
1217	1
1218	1
1219	1
1221	1
1223	1
1225	2
1227	1
1229	1
1233	1
1235	1
1239	1
1240	1
1241	3
1244	1
1246	1
1248	1
1250	1
1251	1
1255	1
1256	1
1257	1
1261	3
1262	1
1263	2
1265	1
1266	1
1267	1
1270	2
1271	1
1272	1
1273	1
1274	1
1275	1
1278	1
1280	1
1281	2
1282	1
1285	1
1289	4
1292	1
1294	1
1298	1
1301	1
1302	1
1303	1
1304	3
1309	1
1312	2
1315	2
1317	1
1318	1
1319	2
1322	1
1324	2
1325	1
1326	1
1327	2
1328	1
1330	1
1335	1
1338	1
1342	2
1343	1
1344	3
1345	1
1348	2
1349	1
1353	1
1356	2
1359	1
1362	1
1369	1
1370	2
1373	2
1374	1
1375	1
1376	1
1379	1
1380	1
1381	1
1384	1
1385	1
1388	1
1389	1
1392	1
1394	1
1396	1
1397	1
1398	1
1400	2
1401	1
1402	2
1403	1
1405	2
1409	2
1411	2
1413	2
1418	1
1421	1
1425	1
1426	1
1430	1
1433	2
1436	2
1439	1
1441	1
1442	1
1449	2
1454	1
1455	1
1460	1
1464	1
1466	1
1468	1
1470	1
1471	1
1476	1
1477	1
1479	1
1482	2
1493	2
1498	1
1499	1
1505	1
1506	1
1514	1
1517	1
1521	1
1527	1
1528	1
1529	2
1531	1
1532	1
1533	1
1534	2
1536	2
1538	1
1540	2
1543	2
1549	1
1551	1
1552	1
1553	1
1554	1
1555	1
1564	1
1567	3
1568	2
1570	1
1572	1
1574	1
1575	1
1576	2
1579	3
1585	1
1587	1
1588	2
1589	1
1590	1
1591	1
1593	3
1595	2
1598	1
1599	2
1601	1
1603	1
1612	1
1616	1
1620	1
1621	1
1627	1
1631	1
1634	1
1637	1
1639	1
1641	1
1642	2
1648	1
1650	1
1653	1
1654	1
1655	1
1657	1
1658	1
1659	1
1662	1
1666	2
1668	3
1672	1
1674	1
1678	1
1680	1
1682	1
1683	1
1688	1
1695	1
1699	1
1703	1
1704	1
1705	1
1706	1
1707	1
1710	1
1711	1
1713	1
1719	1
1724	2
1727	1
1734	1
1738	2
1741	2
1754	2
1763	2
1764	1
1772	1
1774	1
1775	1
1777	1
1778	1
1781	1
1783	1
1789	1
1800	1
1806	1
1816	1
1817	1
1819	2
1823	1
1830	1
1860	1
1868	1
1873	1
1874	1
1879	1
1881	1
1883	1
1901	1
1908	1
1926	1
1927	1
1928	1
1932	1
1940	2
1944	1
1950	1
1952	1
1953	1
1959	1
1960	1
1961	1
1968	1
1972	1
1979	1
1981	1
1986	1
1989	1
1990	2
1993	1
1999	1
2007	1
2016	1
2018	1
2022	1
2026	1
2027	1
2048	1
2050	1
2051	1
2061	1
2069	1
2074	1
2078	1
2087	1
2094	1
2095	2
2097	2
2105	1
2107	1
2109	1
2111	1
2125	1
2132	1
2133	1
2135	1
2141	1
2144	1
2150	1
2161	1
2162	2
2170	1
2173	1
2188	1
2212	1
2222	1
2229	1
2233	1
2237	1
2239	1
2245	1
2256	1
2262	1
2289	1
2304	1
2310	1
2318	1
2332	1
2336	1
2344	1
2355	1
2384	1
2391	1
2410	1
2415	1
2417	1
2424	1
2437	1
2443	1
2460	1
2464	1
2503	1
2505	1
2517	1
2530	1
2537	1
2619	1
2671	1
2678	1
2688	1
2743	1
2748	1
2766	1
2768	2
2785	1
2802	1
2827	1
2869	1
2879	1
2884	1
2888	1
2960	1
2967	1
2968	1
3073	1
3090	1
3153	1
3167	1
3228	1
3229	1
3288	1
3352	1
3374	1
3375	1
3376	1
3444	1
3474	1
3506	1
3532	1
3576	1
3635	1
3685	1
3747	1
3761	1
3843	1
3925	1
4180	1
4205	1
4229	1
4238	1
4432	1
4643	1
4652	1
4934	1
4935	1
5016	1
5206	1
5579	1
5642	1
5796	1
6503	1
6824	1
6829	1
6919	1
7523	1
8498	1
8767	1
9706	1
9869	1
12181	1
28107	1
32681	1
1422897	1

[ESTIMATING YIELD CURVE]
[BOOTSTRAPPING HISTOGRAM]
_...._._._.._._.........__........._._...__.._........_.........._._..__
.__.._...__._._....._...._.._._._.__.._...__..__......__._._._.._......
[COMPUTING CONFIDENCE INTERVALS]
[WRITING OUTPUT]