Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ee/b058659fd33f79c88e18ace448dbfc/659_bR4-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/99/ce33ecda1d6940901f8feedba9fc08/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/99/ce33ecda1d6940901f8feedba9fc08/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory
ls: *.crai: No such file or directory