Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/45/e8c3cedd58926cf1eda0992875ce74/659_end-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/75/e84708cb6f1297bf4e2d9507fe0b31/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/75/e84708cb6f1297bf4e2d9507fe0b31/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory
ls: *.crai: No such file or directory