File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/90/84989150e068912185641c04a28f8b/.command.log
Size
95.7 KB
Attempt
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a8/f1ac8f0fecd46ebb3889adff47e4a4/659_dfA-T1-TRNA-1_B23MHV2LT4_1.Chimeric.out.junction
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/90/84989150e068912185641c04a28f8b/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/bd/e35f8ce7eb8c5d22f4b7b21b96c7ae/659_dfA-T1-TRNA-1_B23MHV2LT4_1_1.fastp.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/90/84989150e068912185641c04a28f8b/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/bd/e35f8ce7eb8c5d22f4b7b21b96c7ae/659_dfA-T1-TRNA-1_B23MHV2LT4_1_2.fastp.fastq.gz
==> STAGING COMPLETE (6 inputs)

-ctat genome lib [/tmp/nxf.2tayf1wUFG/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.2tayf1wUFG/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.2tayf1wUFG/./star-fusion.preliminary
-sample contains 296071600 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes  --genome_lib_dir /tmp/nxf.2tayf1wUFG/ctat_genome_lib_build_dir  -J /tmp/nxf.2tayf1wUFG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.Chimeric.out.junction  -O /tmp/nxf.2tayf1wUFG/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 
-parsing fusion evidence: /tmp/nxf.2tayf1wUFG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.Chimeric.out.junction
-building interval tree based on /tmp/nxf.2tayf1wUFG/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

[10000], rate=50000.00/min 
[20000], rate=50000.00/min 
[30000], rate=56250.00/min 
[40000], rate=60000.00/min 
[50000], rate=63829.79/min 
[60000], rate=65454.55/min 
[70000], rate=67741.94/min 
[80000], rate=69565.22/min 
[90000], rate=73972.60/min 
[100000], rate=76923.08/min 
[110000], rate=79518.07/min 
[120000], rate=80000.00/min 
[130000], rate=80412.37/min 
[140000], rate=80769.23/min 
[150000], rate=82568.81/min 
[160000], rate=83478.26/min 
[170000], rate=77862.60/min 
[180000], rate=71523.18/min 
[190000], rate=66666.67/min 
[200000], rate=63492.06/min 
[210000], rate=60576.92/min 
[220000], rate=57142.86/min 
[230000], rate=54980.08/min 
[240000], rate=53136.53/min 
[250000], rate=51724.14/min 
[260000], rate=50485.44/min 
[270000], rate=49541.28/min 
[280000], rate=48414.99/min 
[290000], rate=47540.98/min 
[300000], rate=46753.25/min 
[310000], rate=46039.60/min 
[320000], rate=45390.07/min 
[330000], rate=44897.96/min 
[340000], rate=44541.48/min 
[350000], rate=44025.16/min 
[360000], rate=43724.70/min 
[370000], rate=43529.41/min 
[380000], rate=43263.76/min 
[390000], rate=43173.43/min 
[400000], rate=43243.24/min 
[410000], rate=43082.31/min 
[420000], rate=42711.86/min 
[430000], rate=42434.21/min 
[440000], rate=42240.00/min 
[450000], rate=42121.68/min 
[460000], rate=42201.83/min 
[470000], rate=42152.47/min 
[480000], rate=42166.91/min 
[490000], rate=42241.38/min 
[500000], rate=42253.52/min 
[510000], rate=42323.65/min 
[520000], rate=42333.79/min 
[530000], rate=42400.00/min 
[540000], rate=42297.65/min 
[550000], rate=42199.49/min 
[560000], rate=42211.06/min 
[570000], rate=42222.22/min 
[580000], rate=42233.01/min 
[590000], rate=42243.44/min 
[600000], rate=42154.57/min 
[610000], rate=42165.90/min 
[620000], rate=42176.87/min 
[630000], rate=42234.64/min 
[640000], rate=42290.75/min 
[650000], rate=42391.30/min 
[660000], rate=42489.27/min 
[670000], rate=42539.68/min 
[680000], rate=42677.82/min 
[690000], rate=42724.46/min 
[700000], rate=42900.92/min 
[710000], rate=42986.88/min 
[720000], rate=43156.84/min 
[730000], rate=43280.63/min 
[740000], rate=43401.76/min 
[750000], rate=43394.41/min 
[760000], rate=43553.01/min 
[770000], rate=43708.61/min 
[780000], rate=43943.66/min 
[790000], rate=44052.04/min 
[800000], rate=44198.90/min 
[810000], rate=44181.82/min 
[820000], rate=44364.29/min 
[830000], rate=44543.83/min 
[840000], rate=44760.21/min 
[850000], rate=44973.54/min 
[860000], rate=45183.89/min 
[870000], rate=45233.97/min 
[880000], rate=44407.06/min 
[890000], rate=44278.61/min 
[900000], rate=44081.63/min 
[910000], rate=44103.39/min 
[920000], rate=43984.06/min 
[930000], rate=44041.04/min 
[940000], rate=44062.50/min 
[950000], rate=44151.82/min 
[960000], rate=44239.63/min 
[970000], rate=44359.76/min 
[980000], rate=44478.06/min 
[990000], rate=44561.14/min 
[1000000], rate=44676.10/min 
[1010000], rate=44298.25/min 
[1020000], rate=44412.19/min 
[1030000], rate=44556.60/min 
[1040000], rate=44667.14/min 
[1050000], rate=44807.97/min 
[1060000], rate=44947.00/min 
[1070000], rate=45115.95/min 
[1080000], rate=45219.82/min 
[1090000], rate=45353.68/min 
[1100000], rate=45392.02/min 
[1110000], rate=45522.90/min 
[1120000], rate=45901.64/min 
[1130000], rate=46028.51/min 
[1140000], rate=46247.46/min 
[1150000], rate=46246.65/min 
[1160000], rate=46092.72/min 
[1170000], rate=45972.50/min 
[1180000], rate=46123.78/min 
[1190000], rate=46273.49/min 
[1200000], rate=46361.88/min 
[1210000], rate=46124.52/min 
[1220000], rate=46241.31/min 
[1230000], rate=46620.34/min 
[1240000], rate=46763.04/min 
[1250000], rate=46992.48/min 
[1260000], rate=46956.52/min 
[1270000], rate=47037.04/min 
[1280000], rate=47087.68/min 
[1290000], rate=47108.95/min 
[1300000], rate=47244.09/min 
[1310000], rate=47122.30/min 
[1320000], rate=46863.91/min 
[1330000], rate=46639.39/min 
[1340000], rate=46447.14/min 
[1350000], rate=46101.31/min 
[1360000], rate=45714.29/min 
[1370000], rate=45439.47/min 
[1380000], rate=45569.62/min 
[1390000], rate=45723.68/min 
[1400000], rate=45876.57/min 
[1410000], rate=46103.54/min 
[1420000], rate=46430.52/min 
[1430000], rate=46732.03/min 
[1440000], rate=47058.82/min 
[1450000], rate=47359.83/min 
[1460000], rate=47686.45/min 
[1470000], rate=48013.06/min 
[1480000], rate=48313.38/min 
[1490000], rate=48639.83/min 
[1500000], rate=48939.64/min 
[1510000], rate=49265.91/min 
[1520000], rate=49377.37/min 
[1530000], rate=49275.36/min 
[1540000], rate=49148.94/min 
[1550000], rate=49284.58/min 
[1560000], rate=49185.50/min 
[1570000], rate=49036.96/min 
[1580000], rate=48491.05/min 
[1590000], rate=47891.57/min 
[1600000], rate=47244.09/min 
[1610000], rate=46915.98/min 
[1620000], rate=46933.85/min 
[1630000], rate=46974.06/min 
[1640000], rate=47013.86/min 
[1650000], rate=47030.88/min 
[1660000], rate=47114.47/min 
[1670000], rate=47152.94/min 
[1680000], rate=47191.01/min 
[1690000], rate=47272.73/min 
[1700000], rate=47375.75/min 
[1710000], rate=47456.06/min 
[1720000], rate=47557.60/min 
[1730000], rate=47636.53/min 
[1740000], rate=47627.74/min 
[1750000], rate=47640.65/min 
[1760000], rate=47567.57/min 
[1770000], rate=47453.08/min 
[1780000], rate=47403.46/min 
[1790000], rate=47354.50/min 
[1800000], rate=47264.77/min 
[1810000], rate=46449.96/min 
[1820000], rate=45747.80/min 
[1830000], rate=44963.14/min 
[1840000], rate=44750.71/min 
[1850000], rate=44524.67/min 
[1860000], rate=44110.67/min 
[1870000], rate=43811.01/min 
[1880000], rate=43518.52/min 
[1890000], rate=43381.79/min 
[1900000], rate=42824.94/min 
[1910000], rate=42761.19/min 
[1920000], rate=42841.20/min 
[1930000], rate=42683.38/min 
[1940000], rate=42250.45/min 
[1950000], rate=42146.97/min 
[1960000], rate=42060.09/min 
[1970000], rate=41974.43/min 
[1980000], rate=41772.15/min 
[1990000], rate=41660.85/min 
[2000000], rate=41536.86/min 
[2010000], rate=41429.06/min 
[2020000], rate=41308.79/min 
[2030000], rate=41162.55/min 
[2040000], rate=41087.61/min 
[2050000], rate=41027.35/min 
[2060000], rate=40940.71/min 
[2070000], rate=40909.09/min 
[2080000], rate=40891.22/min 
[2090000], rate=40860.22/min 
[2100000], rate=40723.98/min 
[2110000], rate=40694.31/min 
[2120000], rate=40677.97/min 
[2130000], rate=40558.55/min 
[2140000], rate=40568.72/min 
[2150000], rate=40566.04/min 
[2160000], rate=40576.08/min 
[2170000], rate=40586.03/min 
[2180000], rate=40608.51/min 
[2190000], rate=40555.56/min 
[2200000], rate=40577.93/min 
[2210000], rate=40575.28/min 
[2220000], rate=40609.76/min 
[2230000], rate=40631.64/min 
[2240000], rate=40702.60/min 
[2250000], rate=40748.57/min 
[2260000], rate=40794.22/min 
[2270000], rate=40876.35/min 
[2280000], rate=40933.57/min 
[2290000], rate=40978.23/min 
[2300000], rate=41059.21/min 
[2310000], rate=41139.80/min 
[2320000], rate=41244.44/min 
[2330000], rate=41324.27/min 
[2340000], rate=41415.93/min 
[2350000], rate=41446.21/min 
[2360000], rate=41331.00/min 
[2370000], rate=41277.21/min 
[2380000], rate=40952.11/min 
[2390000], rate=40680.85/min 
[2400000], rate=40586.25/min 
[2410000], rate=40492.86/min 
[2420000], rate=40288.57/min 
[2430000], rate=40242.89/min 
[2440000], rate=40230.83/min 
[2450000], rate=40098.20/min 
[2460000], rate=40065.15/min 
[2470000], rate=39989.21/min 
[2480000], rate=39722.37/min 
[2490000], rate=39628.65/min 
[2500000], rate=39567.40/min 
[2510000], rate=39269.88/min 
[2520000], rate=39262.53/min 
[2530000], rate=39285.71/min 
[2540000], rate=39318.89/min 
[2550000], rate=39351.85/min 
[2560000], rate=39394.72/min 
[2570000], rate=39427.26/min 
[2580000], rate=39479.72/min 
[2590000], rate=39521.87/min -building interval tree based on /tmp/nxf.2tayf1wUFG/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

[10000], rate=85714.29/min 
[20000], rate=85714.29/min 
[30000], rate=85714.29/min 
[40000], rate=82758.62/min 
[50000], rate=83333.33/min 
[60000], rate=83720.93/min 
[70000], rate=82352.94/min 
[80000], rate=85714.29/min 
[90000], rate=81818.18/min 
[100000], rate=74074.07/min 
[110000], rate=68750.00/min 
[120000], rate=64864.86/min 
[130000], rate=63414.63/min 
[140000], rate=60869.57/min 
[150000], rate=59602.65/min 
[160000], rate=59259.26/min 
[170000], rate=57627.12/min 
[180000], rate=56544.50/min 
[190000], rate=55339.81/min 
[200000], rate=54298.64/min 
[210000], rate=53389.83/min 
[220000], rate=52800.00/min 
[230000], rate=52471.48/min 
[240000], rate=52173.91/min 
[250000], rate=51724.14/min 
[260000], rate=51147.54/min 
[270000], rate=51265.82/min 
[280000], rate=51063.83/min 
[290000], rate=50877.19/min 
[300000], rate=50847.46/min 
[310000], rate=50819.67/min 
[320000], rate=51063.83/min 
[330000], rate=51162.79/min 
[340000], rate=51127.82/min 
[350000], rate=51219.51/min 
[360000], rate=51428.57/min 
[370000], rate=51627.91/min 
[380000], rate=51936.22/min 
[390000], rate=52232.14/min 
[400000], rate=52631.58/min 
[410000], rate=53131.75/min 
[420000], rate=53389.83/min 
[430000], rate=53862.21/min 
[440000], rate=53987.73/min 
[450000], rate=54325.96/min 
[460000], rate=54545.45/min 
[470000], rate=54970.76/min 
[480000], rate=55384.62/min 
[490000], rate=55576.56/min 
[500000], rate=55762.08/min 
[510000], rate=56043.96/min 
[520000], rate=56419.53/min 
[530000], rate=56684.49/min 
[540000], rate=56942.00/min 
[550000], rate=57291.67/min 
[560000], rate=57632.93/min 
[570000], rate=57966.10/min 
[580000], rate=58291.46/min 
[590000], rate=58223.68/min 
[600000], rate=57416.27/min 
[610000], rate=56744.19/min 
[620000], rate=56193.35/min 
[630000], rate=55588.24/min 
[640000], rate=55093.26/min 
[650000], rate=54545.45/min 
[660000], rate=54470.43/min 
[670000], rate=54032.26/min 
[680000], rate=53825.86/min 
[690000], rate=53976.53/min 
[700000], rate=53708.44/min 
[710000], rate=53383.46/min 
[720000], rate=52941.18/min 
[730000], rate=52517.99/min 
[740000], rate=52112.68/min 
[750000], rate=51783.66/min 
[760000], rate=51525.42/min 
[770000], rate=51219.51/min 
[780000], rate=50924.92/min 
[790000], rate=50695.19/min 
[800000], rate=50473.19/min 
[810000], rate=50051.49/min 
[820000], rate=49898.58/min 
[830000], rate=49552.24/min 
[840000], rate=48461.54/min 
[850000], rate=48022.60/min 
[860000], rate=48000.00/min 
[870000], rate=48022.08/min 
[880000], rate=48000.00/min 
[890000], rate=47007.04/min 
[900000], rate=46114.43/min 
[910000], rate=45959.60/min 
[920000], rate=45847.18/min 
[930000], rate=45737.70/min 
[940000], rate=45705.02/min 
[950000], rate=45563.55/min 
[960000], rate=45533.60/min 
[970000], rate=45682.89/min 
[980000], rate=45830.09/min 
[990000], rate=45975.23/min 
[1000000], rate=46118.37/min 
[1010000], rate=46294.88/min 
[1020000], rate=46469.25/min 
[1030000], rate=46641.51/min 
[1040000], rate=46811.70/min 
[1050000], rate=46979.87/min 
[1060000], rate=47146.03/min 
[1070000], rate=46454.41/min 
[1080000], rate=46022.73/min 
[1090000], rate=45734.27/min 
[1100000], rate=45143.64/min 
[1110000], rate=44578.31/min 
[1120000], rate=43495.15/min 
[1130000], rate=43212.24/min 
[1140000], rate=42405.46/min 
[1150000], rate=41742.29/min 
[1160000], rate=41232.23/min 
[1170000], rate=40414.51/min 
[1180000], rate=39663.87/min 
[1190000], rate=39360.53/min 
[1200000], rate=39279.87/min 
[1210000], rate=39306.98/min 
[1220000], rate=39354.84/min 
[1230000], rate=38780.87/min 
[1240000], rate=38409.91/min 
[1250000], rate=38422.13/min 
[1260000], rate=38512.48/min 
[1270000], rate=38329.98/min 
[1280000], rate=37813.88/min 
[1290000], rate=37774.52/min 
[1300000], rate=37882.47/min 
[1310000], rate=37806.64/min 
[1320000], rate=37660.49/min 
[1330000], rate=37712.67/min 
[1340000], rate=37764.21/min 
[1350000], rate=37832.79/min 
[1360000], rate=37883.01/min 
[1370000], rate=37950.14/min 
[1380000], rate=38033.99/min 
[1390000], rate=38134.43/min 
[1400000], rate=37974.68/min 
[1410000], rate=37767.86/min 
[1420000], rate=37533.04/min 
[1430000], rate=37385.62/min 
[1440000], rate=37467.48/min 
[1450000], rate=37580.99/min 
[1460000], rate=37693.63/min 
[1470000], rate=37837.84/min 
[1480000], rate=37964.94/min 
[1490000], rate=38091.18/min 
[1500000], rate=38071.07/min 
[1510000], rate=38147.37/min 
[1520000], rate=38319.33/min 
[1530000], rate=38170.48/min 
[1540000], rate=37962.20/min 
[1550000], rate=37866.45/min 
[1560000], rate=37741.94/min 
[1570000], rate=37529.88/min 
[1580000], rate=37485.17/min 
[1590000], rate=37280.19/min 
[1600000], rate=36979.97/min 
[1610000], rate=36870.23/min 
[1620000], rate=36874.05/min 
[1630000], rate=36877.83/min 
[1640000], rate=36648.04/min 
[1650000], rate=36653.09/min 
[1660000], rate=36563.88/min 
[1670000], rate=36251.81/min 
[1680000], rate=35974.30/min 
[1690000], rate=35754.58/min 
[1700000], rate=35751.84/min 
[1710000], rate=35824.02/min 
[1720000], rate=35820.90/min 
[1730000], rate=35596.71/min 
[1740000], rate=35631.40/min 
[1750000], rate=35714.29/min 
[1760000], rate=35784.48/min 
[1770000], rate=35854.15/min 
[1780000], rate=35923.31/min 
[1790000], rate=35907.72/min 
[1800000], rate=35868.48/min 
[1810000], rate=35948.36/min 
[1820000], rate=36039.60/min 
[1830000], rate=36130.31/min 
[1840000], rate=36232.36/min 
[1850000], rate=36321.99/min 
[1860000], rate=36434.87/min 
[1870000], rate=36571.06/min 
[1880000], rate=36682.93/min 
[1890000], rate=36806.23/min 
[1900000], rate=36881.27/min 
[1910000], rate=36730.77/min 
[1920000], rate=36641.22/min 
[1930000], rate=36622.39/min 
[1940000], rate=36557.79/min 
[1950000], rate=36425.90/min 
[1960000], rate=36397.40/min 
[1970000], rate=36391.63/min 
[1980000], rate=36374.77/min 
[1990000], rate=36380.26/min 
[2000000], rate=36396.72/min 
[2010000], rate=36446.06/min 
[2020000], rate=36473.07/min 
[2030000], rate=36521.74/min 
[2040000], rate=36559.14/min 
[2050000], rate=36607.14/min 
[2060000], rate=36643.94/min 
[2070000], rate=36702.13/min 
[2080000], rate=36759.94/min 
[2090000], rate=36752.64/min 
[2100000], rate=36617.26/min 
[2110000], rate=36685.02/min 
[2120000], rate=36625.40/min 
[2130000], rate=36524.72/min 
[2140000], rate=36560.36/min 
[2150000], rate=36626.92/min 
[2160000], rate=36703.48/min 
[2170000], rate=36790.05/min 
[2180000], rate=36876.23/min 
[2190000], rate=36972.43/min 
[2200000], rate=37057.83/min 
[2210000], rate=37132.46/min 
[2220000], rate=37227.50/min 
[2230000], rate=37311.77/min 
[2240000], rate=37395.66/min 
[2250000], rate=37489.59/min 
[2260000], rate=37562.33/min 
[2270000], rate=37655.52/min 
[2280000], rate=37706.73/min 
[2290000], rate=37612.92/min 
[2300000], rate=37612.43/min 
[2310000], rate=37632.36/min 
[2320000], rate=37641.97/min 
[2330000], rate=37681.94/min 
[2340000], rate=37711.52/min 
[2350000], rate=37740.90/min 
[2360000], rate=37760.00/min 
[2370000], rate=37799.04/min 
[2380000], rate=37827.81/min 
[2390000], rate=37886.39/min 
[2400000], rate=37934.67/min 
[2410000], rate=37992.64/min 
[2420000], rate=38040.35/min 
[2430000], rate=38097.73/min 
[2440000], rate=38164.75/min 
[2450000], rate=38132.30/min 
[2460000], rate=38169.12/min 
[2470000], rate=38235.29/min 
[2480000], rate=38311.02/min 
[2490000], rate=38366.72/min 
[2500000], rate=38431.98/min 
[2510000], rate=38496.93/min 
[2520000], rate=38551.76/min 
[2530000], rate=38635.79/min 
[2540000], rate=38709.68/min 
[2550000], rate=38802.94/min 
[2560000], rate=38886.08/min 
[2570000], rate=38959.07/min 
[2580000], rate=39021.93/min 
[2590000], rate=39084.51/min -building interval tree based on /tmp/nxf.2tayf1wUFG/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

[10000], rate=54545.45/min 
[20000], rate=52173.91/min 
[30000], rate=56250.00/min 
[40000], rate=60000.00/min 
[50000], rate=62500.00/min 
[60000], rate=64285.71/min 
[70000], rate=65625.00/min 
[80000], rate=67605.63/min 
[90000], rate=68354.43/min 
[100000], rate=68965.52/min 
[110000], rate=70212.77/min 
[120000], rate=71287.13/min 
[130000], rate=69026.55/min 
[140000], rate=68852.46/min 
[150000], rate=68181.82/min 
[160000], rate=65753.42/min 
[170000], rate=64150.94/min 
[180000], rate=63157.89/min 
[190000], rate=61956.52/min 
[200000], rate=60913.71/min 
[210000], rate=60000.00/min 
[220000], rate=59459.46/min 
[230000], rate=58974.36/min 
[240000], rate=58064.52/min 
[250000], rate=57915.06/min 
[260000], rate=57564.58/min 
[270000], rate=57446.81/min 
[280000], rate=57142.86/min 
[290000], rate=57049.18/min 
[300000], rate=57142.86/min 
[310000], rate=57230.77/min 
[320000], rate=57313.43/min 
[330000], rate=57558.14/min 
[340000], rate=57790.37/min 
[350000], rate=57851.24/min 
[360000], rate=58064.52/min 
[370000], rate=58421.05/min 
[380000], rate=58762.89/min 
[390000], rate=58942.07/min 
[400000], rate=59259.26/min 
[410000], rate=59564.16/min 
[420000], rate=60000.00/min 
[430000], rate=60421.55/min 
[440000], rate=59325.84/min 
[450000], rate=58315.33/min 
[460000], rate=57500.00/min 
[470000], rate=56854.84/min 
[480000], rate=56250.00/min 
[490000], rate=55576.56/min 
[500000], rate=55045.87/min 
[510000], rate=54740.61/min 
[520000], rate=54450.26/min 
[530000], rate=54266.21/min 
[540000], rate=54000.00/min 
[550000], rate=53833.61/min 
[560000], rate=53674.12/min 
[570000], rate=53689.17/min 
[580000], rate=53538.46/min 
[590000], rate=53881.28/min 
[600000], rate=53892.22/min 
[610000], rate=53982.30/min 
[620000], rate=53991.29/min 
[630000], rate=54077.25/min 
[640000], rate=54160.79/min 
[650000], rate=54242.00/min 
[660000], rate=54320.99/min 
[670000], rate=54397.83/min 
[680000], rate=54618.47/min 
[690000], rate=55053.19/min 
[700000], rate=55335.97/min 
[710000], rate=55541.07/min 
[720000], rate=55741.94/min 
[730000], rate=55867.35/min 
[740000], rate=56131.48/min 
[750000], rate=56320.40/min 
[760000], rate=55407.05/min 
[770000], rate=54289.07/min 
[780000], rate=53424.66/min 
[790000], rate=52549.89/min 
[800000], rate=51835.85/min 
[810000], rate=51428.57/min 
[820000], rate=50773.99/min 
[830000], rate=49306.93/min 
[840000], rate=48368.52/min 
[850000], rate=47887.32/min 
[860000], rate=47470.10/min 
[870000], rate=47282.61/min 
[880000], rate=47100.80/min 
[890000], rate=46760.07/min 
[900000], rate=46075.09/min 
[910000], rate=46037.10/min 
[920000], rate=45695.36/min 
[930000], rate=45439.74/min 
[940000], rate=44904.46/min 
[950000], rate=44917.26/min 
[960000], rate=44929.80/min 
[970000], rate=44942.08/min 
[980000], rate=44851.26/min 
[990000], rate=44762.62/min 
[1000000], rate=44609.67/min 
[1010000], rate=44591.61/min 
[1020000], rate=44509.09/min 
[1030000], rate=44524.50/min 
[1040000], rate=44635.19/min 
[1050000], rate=44744.32/min 
[1060000], rate=44694.31/min 
[1070000], rate=44614.32/min 
[1080000], rate=44658.86/min 
[1090000], rate=44369.06/min 
[1100000], rate=44295.30/min 
[1110000], rate=44223.11/min 
[1120000], rate=44007.86/min 
[1130000], rate=43685.57/min 
[1140000], rate=43622.45/min 
[1150000], rate=43151.97/min 
[1160000], rate=42936.46/min 
[1170000], rate=42830.99/min 
[1180000], rate=42650.60/min 
[1190000], rate=42677.82/min 
[1200000], rate=42528.06/min 
[1210000], rate=42233.86/min 
[1220000], rate=41590.91/min 
[1230000], rate=41437.39/min 
[1240000], rate=41264.56/min 
[1250000], rate=40783.03/min 
[1260000], rate=40688.91/min 
[1270000], rate=40661.69/min 
[1280000], rate=40570.52/min 
[1290000], rate=40207.79/min 
[1300000], rate=39877.30/min 
[1310000], rate=39959.33/min 
[1320000], rate=40040.44/min 
[1330000], rate=40100.50/min 
[1340000], rate=40059.79/min 
[1350000], rate=40000.00/min 
[1360000], rate=40098.28/min 
[1370000], rate=40195.60/min 
[1380000], rate=39980.69/min 
[1390000], rate=39752.14/min 
[1400000], rate=39697.54/min 
[1410000], rate=39477.37/min 
[1420000], rate=39499.30/min 
[1430000], rate=39648.80/min 
[1440000], rate=39724.14/min 
[1450000], rate=39384.34/min 
[1460000], rate=38829.79/min 
[1470000], rate=38381.20/min 
[1480000], rate=37932.51/min 
[1490000], rate=36988.00/min 
[1500000], rate=36481.56/min 
[1510000], rate=36327.19/min 
[1520000], rate=36204.84/min 
[1530000], rate=35803.43/min 
[1540000], rate=35267.18/min 
[1550000], rate=35067.87/min 
[1560000], rate=34912.35/min 
[1570000], rate=34632.35/min 
[1580000], rate=34611.17/min 
[1590000], rate=34602.83/min 
[1600000], rate=34445.64/min 
[1610000], rate=34328.36/min 
[1620000], rate=34285.71/min 
[1630000], rate=33958.33/min 
[1640000], rate=33814.43/min 
[1650000], rate=33799.93/min 
[1660000], rate=33774.16/min 
[1670000], rate=33714.67/min 
[1680000], rate=33667.33/min 
[1690000], rate=33654.17/min 
[1700000], rate=33652.26/min 
[1710000], rate=33562.32/min 
[1720000], rate=33258.14/min 
[1730000], rate=32994.28/min 
[1740000], rate=32788.94/min 
[1750000], rate=32853.57/min 
[1760000], rate=32907.45/min 
[1770000], rate=32920.02/min 
[1780000], rate=32932.47/min 
[1790000], rate=32995.39/min 
[1800000], rate=33057.85/min 
[1810000], rate=33119.85/min 
[1820000], rate=33151.18/min 
[1830000], rate=33002.71/min 
[1840000], rate=32965.06/min 
[1850000], rate=32976.83/min 
[1860000], rate=32930.07/min 
[1870000], rate=33000.00/min 
[1880000], rate=33069.48/min 
[1890000], rate=33003.49/min 
[1900000], rate=32947.98/min 
[1910000], rate=33025.94/min 
[1920000], rate=33112.96/min 
[1930000], rate=33190.03/min 
[1940000], rate=33266.65/min 
[1950000], rate=33342.83/min 
[1960000], rate=33428.08/min 
[1970000], rate=33512.90/min 
[1980000], rate=33578.29/min 
[1990000], rate=33662.25/min 
[2000000], rate=33745.78/min 
[2010000], rate=33819.41/min 
[2020000], rate=33911.58/min 
[2030000], rate=33993.86/min 
[2040000], rate=34104.21/min 
[2050000], rate=34195.16/min 
[2060000], rate=34124.79/min 
[2070000], rate=34055.39/min 
[2080000], rate=34089.05/min 
[2090000], rate=34159.63/min 
[2100000], rate=34239.13/min 
[2110000], rate=34105.60/min 
[2120000], rate=34111.02/min 
[2130000], rate=34180.26/min 
[2140000], rate=34249.13/min 
[2150000], rate=34326.77/min 
[2160000], rate=34413.17/min 
[2170000], rate=34480.93/min 
[2180000], rate=34557.46/min 
[2190000], rate=34361.92/min 
[2200000], rate=34170.33/min 
[2210000], rate=34026.17/min 
[2220000], rate=33867.28/min 
[2230000], rate=33719.76/min 
[2240000], rate=33583.21/min 
[2250000], rate=33448.96/min 
[2260000], rate=33325.14/min 
[2270000], rate=33227.62/min 
[2280000], rate=33147.56/min 
[2290000], rate=33052.68/min 
[2300000], rate=32998.57/min 
[2310000], rate=32937.26/min 
[2320000], rate=32900.02/min 
[2330000], rate=32840.03/min 
[2340000], rate=32780.76/min 
[2350000], rate=32646.45/min 
[2360000], rate=32604.19/min 
[2370000], rate=32569.86/min 
[2380000], rate=32521.07/min 
[2390000], rate=32502.27/min 
[2400000], rate=32476.32/min 
[2410000], rate=32465.20/min 
[2420000], rate=32483.22/min 
[2430000], rate=32486.63/min 
[2440000], rate=32497.23/min 
[2450000], rate=32543.72/min 
[2460000], rate=32568.40/min 
[2470000], rate=32607.26/min 
[2480000], rate=32631.58/min 
[2490000], rate=32662.88/min 
[2500000], rate=32701.11/min 
[2510000], rate=32739.13/min 
[2520000], rate=32784.04/min 
[2530000], rate=32835.82/min 
[2540000], rate=32887.35/min 
[2550000], rate=32938.64/min 
[2560000], rate=32996.78/min 
[2570000], rate=33047.58/min 
[2580000], rate=33098.14/min 
[2590000], rate=33155.54/min -building interval tree based on /tmp/nxf.2tayf1wUFG/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

[10000], rate=75000.00/min 
[20000], rate=75000.00/min 
[30000], rate=90000.00/min 
[40000], rate=85714.29/min 
[50000], rate=88235.29/min 
[60000], rate=97297.30/min 
[70000], rate=97674.42/min 
[80000], rate=96000.00/min 
[90000], rate=100000.00/min 
[100000], rate=98360.66/min 
[110000], rate=98507.46/min 
[120000], rate=98630.14/min 
[130000], rate=102631.58/min 
[140000], rate=101204.82/min 
[150000], rate=98901.10/min 
[160000], rate=98969.07/min 
[170000], rate=100000.00/min 
[180000], rate=100000.00/min 
[190000], rate=99130.43/min 
[200000], rate=99173.55/min 
[210000], rate=96183.21/min 
[220000], rate=95652.17/min 
[230000], rate=96503.50/min 
[240000], rate=96644.30/min 
[250000], rate=96153.85/min 
[260000], rate=96296.30/min 
[270000], rate=89502.76/min 
[280000], rate=76363.64/min 
[290000], rate=64206.64/min 
[300000], rate=56426.33/min 
[310000], rate=51239.67/min 
[320000], rate=47174.45/min 
[330000], rate=43805.31/min 
[340000], rate=40963.86/min 
[350000], rate=38321.17/min 
[360000], rate=36302.52/min 
[370000], rate=34687.50/min 
[380000], rate=34029.85/min 
[390000], rate=32545.20/min 
[400000], rate=31007.75/min 
[410000], rate=30000.00/min 
[420000], rate=28701.59/min 
[430000], rate=28013.03/min 
[440000], rate=27049.18/min 
[450000], rate=25763.36/min 
[460000], rate=25090.91/min 
[470000], rate=24628.82/min 
[480000], rate=24283.31/min 
[490000], rate=23538.83/min 
[500000], rate=23023.79/min 
[510000], rate=22616.41/min 
[520000], rate=22349.57/min 
[530000], rate=22037.42/min 
[540000], rate=21428.57/min 
[550000], rate=21194.61/min 
[560000], rate=20882.54/min 
[570000], rate=20614.83/min 
[580000], rate=20046.08/min 
[590000], rate=19493.39/min 
[600000], rate=19118.43/min 
[610000], rate=18635.44/min 
[620000], rate=18379.45/min 
[630000], rate=18296.22/min 
[640000], rate=18311.87/min 
[650000], rate=18292.68/min 
[660000], rate=18299.45/min 
[670000], rate=18339.42/min 
[680000], rate=18403.25/min 
[690000], rate=18465.66/min 
[700000], rate=18494.06/min 
[710000], rate=18578.28/min 
[720000], rate=18652.85/min 
[730000], rate=18693.98/min 
[740000], rate=18461.54/min 
[750000], rate=18526.14/min 
[760000], rate=18635.06/min 
[770000], rate=18712.03/min 
[780000], rate=18787.64/min 
[790000], rate=18787.16/min 
[800000], rate=18882.77/min 
[810000], rate=18962.15/min 
[820000], rate=18923.08/min 
[830000], rate=18928.16/min 
[840000], rate=18961.63/min 
[850000], rate=18987.34/min 
[860000], rate=18998.53/min 
[870000], rate=19085.92/min 
[880000], rate=19165.15/min 
[890000], rate=19215.55/min 
[900000], rate=19230.77/min 
[910000], rate=19151.18/min 
[920000], rate=19160.01/min 
[930000], rate=19214.88/min 
[940000], rate=19282.05/min 
[950000], rate=19361.41/min 
[960000], rate=19446.32/min 
[970000], rate=19523.65/min 
[980000], rate=19613.08/min 
[990000], rate=19714.57/min 
[1000000], rate=19672.13/min 
[1010000], rate=19611.65/min 
[1020000], rate=19627.97/min 
[1030000], rate=19581.75/min 
[1040000], rate=19672.13/min 
[1050000], rate=19780.22/min 
[1060000], rate=19757.69/min 
[1070000], rate=19827.05/min 
[1080000], rate=19938.46/min 
[1090000], rate=20012.24/min 
[1100000], rate=20121.95/min 
[1110000], rate=20237.01/min 
[1120000], rate=20351.30/min 
[1130000], rate=20471.01/min 
[1140000], rate=20596.21/min 
[1150000], rate=20720.72/min 
[1160000], rate=20794.74/min 
[1170000], rate=20806.16/min 
[1180000], rate=20884.96/min 
[1190000], rate=21012.36/min 
[1200000], rate=21139.17/min 
[1210000], rate=21203.27/min 
[1220000], rate=21211.24/min 
[1230000], rate=21109.84/min 
[1240000], rate=21046.68/min 
[1250000], rate=20979.02/min 
[1260000], rate=21029.21/min 
[1270000], rate=21067.18/min 
[1280000], rate=21093.11/min 
[1290000], rate=21164.89/min 
[1300000], rate=21086.78/min 
[1310000], rate=21095.01/min 
[1320000], rate=21125.63/min 
[1330000], rate=21206.48/min 
[1340000], rate=21281.10/min 
[1350000], rate=21310.18/min 
[1360000], rate=21383.65/min 
[1370000], rate=21456.54/min 
[1380000], rate=21545.67/min 
[1390000], rate=21645.47/min 
[1400000], rate=21739.13/min 
[1410000], rate=21832.26/min 
[1420000], rate=21919.22/min 
[1430000], rate=22011.29/min 
[1440000], rate=22108.50/min 
[1450000], rate=22205.21/min 
[1460000], rate=22301.43/min 
[1470000], rate=22402.84/min 
[1480000], rate=22481.01/min 
[1490000], rate=22558.67/min 
[1500000], rate=22635.81/min 
[1510000], rate=22571.00/min 
[1520000], rate=22490.75/min 
[1530000], rate=22439.50/min 
[1540000], rate=22378.30/min 
[1550000], rate=22307.51/min 
[1560000], rate=22211.68/min 
[1570000], rate=22185.59/min 
[1580000], rate=22211.81/min 
[1590000], rate=22191.21/min 
[1600000], rate=22176.02/min 
[1610000], rate=22181.40/min 
[1620000], rate=22212.07/min 
[1630000], rate=22212.13/min 
[1640000], rate=22237.29/min 
[1650000], rate=22247.19/min 
[1660000], rate=22252.01/min 
[1670000], rate=22251.83/min 
[1680000], rate=22241.84/min 
[1690000], rate=22271.03/min 
[1700000], rate=22304.83/min 
[1710000], rate=22343.21/min 
[1720000], rate=22405.56/min 
[1730000], rate=22477.26/min 
[1740000], rate=22553.47/min 
[1750000], rate=22624.43/min 
[1760000], rate=22675.54/min 
[1770000], rate=22721.44/min 
[1780000], rate=22771.86/min 
[1790000], rate=22826.78/min 
[1800000], rate=22876.51/min 
[1810000], rate=22930.74/min 
[1820000], rate=22989.47/min 
[1830000], rate=23043.02/min 
[1840000], rate=23101.07/min 
[1850000], rate=23158.77/min 
[1860000], rate=23216.14/min 
[1870000], rate=23282.84/min 
[1880000], rate=23349.20/min 
[1890000], rate=23420.07/min 
[1900000], rate=23490.62/min 
[1910000], rate=23556.01/min 
[1920000], rate=23630.77/min 
[1930000], rate=23700.37/min 
[1940000], rate=23774.51/min 
[1950000], rate=23853.21/min 
[1960000], rate=23931.62/min 
[1970000], rate=24009.75/min 
[1980000], rate=24092.48/min 
[1990000], rate=24170.04/min 
[2000000], rate=24252.22/min 
[2010000], rate=24334.14/min 
[2020000], rate=24415.79/min 
[2030000], rate=24502.11/min 
[2040000], rate=24583.25/min 
[2050000], rate=24669.07/min 
[2060000], rate=24754.66/min 
[2070000], rate=24835.03/min 
[2080000], rate=24865.51/min 
[2090000], rate=24871.08/min 
[2100000], rate=24871.69/min 
[2110000], rate=24882.08/min 
[2120000], rate=24902.11/min 
[2130000], rate=24912.28/min 
[2140000], rate=24951.42/min 
[2150000], rate=24985.47/min 
[2160000], rate=25019.31/min 
[2170000], rate=25052.92/min 
[2180000], rate=25091.12/min 
[2190000], rate=25133.89/min 
[2200000], rate=25171.62/min 
[2210000], rate=25223.51/min 
[2220000], rate=25275.14/min 
[2230000], rate=25321.73/min 
[2240000], rate=25372.85/min 
[2250000], rate=25423.73/min 
[2260000], rate=25474.36/min 
[2270000], rate=25529.52/min 
[2280000], rate=25574.87/min 
[2290000], rate=25624.77/min 
[2300000], rate=25674.42/min 
[2310000], rate=25723.83/min 
[2320000], rate=25773.00/min 
[2330000], rate=25826.71/min 
[2340000], rate=25884.96/min 
[2350000], rate=25942.96/min 
[2360000], rate=26000.73/min 
[2370000], rate=26063.05/min 
[2380000], rate=26125.14/min 
[2390000], rate=26187.00/min 
[2400000], rate=26253.42/min 
[2410000], rate=26319.62/min 
[2420000], rate=26395.20/min 
[2430000], rate=26460.98/min 
[2440000], rate=26531.35/min 
[2450000], rate=26601.52/min 
[2460000], rate=26671.49/min 
[2470000], rate=26746.07/min 
[2480000], rate=26815.64/min 
[2490000], rate=26885.01/min 
[2500000], rate=26959.02/min 
[2510000], rate=27032.85/min 
[2520000], rate=27106.49/min 
[2530000], rate=27184.81/min 
[2540000], rate=27262.97/min 
[2550000], rate=27336.07/min 
[2560000], rate=27413.89/min 
[2570000], rate=27476.84/min 
[2580000], rate=27534.69/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads  -J /tmp/nxf.2tayf1wUFG/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt  --genome_lib_dir /tmp/nxf.2tayf1wUFG/ctat_genome_lib_build_dir  --filt_file /tmp/nxf.2tayf1wUFG/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail  -M 50  > /tmp/nxf.2tayf1wUFG/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass 
-parsing /tmp/nxf.2tayf1wUFG/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.

 6000000.00 reads per min processed...  
 12000000.00 reads per min processed...  
 6000000.00 reads per min processed...  
 4800000.00 reads per min processed...  
 5000000.00 reads per min processed...  
 4500000.00 reads per min processed...  
 4200000.00 reads per min processed...  
 4363636.36 reads per min processed...  
 4153846.15 reads per min processed...  
 4000000.00 reads per min processed...  
 4125000.00 reads per min processed...  
 4000000.00 reads per min processed...  
 3900000.00 reads per min processed...  
 4000000.00 reads per min processed...  
 3913043.48 reads per min processed...  
 3840000.00 reads per min processed...  
 3923076.92 reads per min processed...  
 3857142.86 reads per min processed...  
 3931034.48 reads per min processed...  
 3870967.74 reads per min processed...  
 3818181.82 reads per min processed...  
 3882352.94 reads per min processed...  
 3833333.33 reads per min processed...  
 3789473.68 reads per min processed...  
 3846153.85 reads per min processed...  
 3804878.05 reads per min processed...  
 3767441.86 reads per min processed...  
 3818181.82 reads per min processed...  
 3782608.70 reads per min processed...  
 3829787.23 reads per min processed...  
 3795918.37 reads per min processed...  
 3840000.00 reads per min processed...  
 3807692.31 reads per min processed...  
 3777777.78 reads per min processed...  
 3818181.82 reads per min processed...  
 3789473.68 reads per min processed...  
 3827586.21 reads per min processed...  
 3800000.00 reads per min processed...  
 3836065.57 reads per min processed...  
 3809523.81 reads per min processed...  
 3843750.00 reads per min processed...  
 3818181.82 reads per min processed...  
 3909090.91 reads per min processed...  
 3940298.51 reads per min processed...  
 3970588.24 reads per min processed...  
 3887323.94 reads per min processed...  
 3916666.67 reads per min processed...  
 3891891.89 reads per min processed...  
 3920000.00 reads per min processed...  
 3896103.90 reads per min processed...  
 3923076.92 reads per min processed...  
 3900000.00 reads per min processed...  
 3925925.93 reads per min processed...  
 3951219.51 reads per min processed...  
 3928571.43 reads per min processed...  
 3952941.18 reads per min processed...  
 3931034.48 reads per min processed...  
 3910112.36 reads per min processed...  
 3933333.33 reads per min processed...  
 3913043.48 reads per min processed...  
 3935483.87 reads per min processed...  
 3915789.47 reads per min processed...  
 3937500.00 reads per min processed...  
 3958762.89 reads per min processed...  
 3939393.94 reads per min processed...  
 3960000.00 reads per min processed...  
 3941176.47 reads per min processed...  
 3961165.05 reads per min processed...  
 3942857.14 reads per min processed...  
 3962264.15 reads per min processed...  
done.

* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict  -J /tmp/nxf.2tayf1wUFG/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass  -O /tmp/nxf.2tayf1wUFG/./star-fusion.preliminary/star-fusion 
-parsing fusion evidence: /tmp/nxf.2tayf1wUFG/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.2tayf1wUFG/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter  --fusion_preds /tmp/nxf.2tayf1wUFG/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary  -J /tmp/nxf.2tayf1wUFG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.Chimeric.out.junction  --tmpdir /tmp  --min_junction_reads 0  --min_sum_frags 1  --require_LDAS 0  --max_promiscuity 10  --min_pct_dom_promiscuity 20  --min_novel_junction_support 1  --min_alt_pct_junction 10  --aggregate_novel_junction_dist 5  --min_spanning_frags_only 1  --genome_lib_dir /tmp/nxf.2tayf1wUFG/ctat_genome_lib_build_dir  --out_prefix /tmp/nxf.2tayf1wUFG/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.2tayf1wUFG/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -2435472.362286
EM: Round [1] log likelihood: -2434651.478362
EM: Round [2] log likelihood: -2434485.318791
EM: Round [3] log likelihood: -2434409.676821
EM: Round [4] log likelihood: -2434369.497072
EM: Round [5] log likelihood: -2434346.316516
EM: Round [6] log likelihood: -2434332.047472
EM: Round [7] log likelihood: -2434322.745264
EM: Round [8] log likelihood: -2434316.362885
EM: Round [9] log likelihood: -2434311.785980
EM: Round [10] log likelihood: -2434308.380232
EM: Round [11] log likelihood: -2434305.768203
EM: Round [12] log likelihood: -2434303.715237
EM: Round [13] log likelihood: -2434302.069212
EM: Round [14] log likelihood: -2434300.727633
EM: Round [15] log likelihood: -2434299.619051
EM: Round [16] log likelihood: -2434298.692167
EM: Round [17] log likelihood: -2434297.909218
EM: Round [18] log likelihood: -2434297.241816
EM: Round [19] log likelihood: -2434296.668236
EM: Round [20] log likelihood: -2434296.171605
EM: Round [21] log likelihood: -2434295.738647
EM: Round [22] log likelihood: -2434295.358802
EM: Round [23] log likelihood: -2434295.023585
EM: Round [24] log likelihood: -2434294.726123
EM: Round [25] log likelihood: -2434294.460803
EM: Round [26] log likelihood: -2434294.223010
EM: Round [27] log likelihood: -2434294.008923
EM: Round [28] log likelihood: -2434293.815364
EM: Round [29] log likelihood: -2434293.639668
EM: Round [30] log likelihood: -2434293.479594
EM: Round [31] log likelihood: -2434293.333247
EM: Round [32] log likelihood: -2434293.199014
EM: Round [33] log likelihood: -2434293.075520
EM: Round [34] log likelihood: -2434292.961582
EM: Round [35] log likelihood: -2434292.856186
EM: Round [36] log likelihood: -2434292.758449
EM: Round [37] log likelihood: -2434292.667609
EM: Round [38] log likelihood: -2434292.582998
EM: Round [39] log likelihood: -2434292.504034
EM: Round [40] log likelihood: -2434292.430203
EM: Round [41] log likelihood: -2434292.361053
EM: Round [42] log likelihood: -2434292.296184
EM: Round [43] log likelihood: -2434292.235239
EM: Round [44] log likelihood: -2434292.177904
EM: Round [45] log likelihood: -2434292.123893
EM: Round [46] log likelihood: -2434292.072952
EM: Round [47] log likelihood: -2434292.024854
EM: Round [48] log likelihood: -2434291.979390
EM: Round [49] log likelihood: -2434291.936376
EM: Round [50] log likelihood: -2434291.895641
EM: Round [51] log likelihood: -2434291.857030
EM: Round [52] log likelihood: -2434291.820404
EM: Round [53] log likelihood: -2434291.785633
EM: Round [54] log likelihood: -2434291.752600
EM: Round [55] log likelihood: -2434291.721196
EM: Round [56] log likelihood: -2434291.691322
EM: Round [57] log likelihood: -2434291.662886
EM: Round [58] log likelihood: -2434291.635802
EM: Round [59] log likelihood: -2434291.609993
EM: Round [60] log likelihood: -2434291.585386
EM: Round [61] log likelihood: -2434291.561913
EM: Round [62] log likelihood: -2434291.539510
EM: Round [63] log likelihood: -2434291.518120
EM: Round [64] log likelihood: -2434291.497688
EM: Round [65] log likelihood: -2434291.478163
EM: Round [66] log likelihood: -2434291.459497
EM: Round [67] log likelihood: -2434291.441645
EM: Round [68] log likelihood: -2434291.424567
EM: Round [69] log likelihood: -2434291.408221
EM: Round [70] log likelihood: -2434291.392572
EM: Round [71] log likelihood: -2434291.377586
EM: Round [72] log likelihood: -2434291.363229
EM: Round [73] log likelihood: -2434291.349470
EM: Round [74] log likelihood: -2434291.336282
EM: Round [75] log likelihood: -2434291.323636
EM: Round [76] log likelihood: -2434291.311507
EM: Round [77] log likelihood: -2434291.299871
EM: Round [78] log likelihood: -2434291.288705
EM: Round [79] log likelihood: -2434291.277987
EM: Round [80] log likelihood: -2434291.267696
EM: Round [81] log likelihood: -2434291.257814
EM: Round [82] log likelihood: -2434291.248321
EM: Round [83] log likelihood: -2434291.239201
EM: Round [84] log likelihood: -2434291.230436
EM: Round [85] log likelihood: -2434291.222011
EM: Round [86] log likelihood: -2434291.213912
EM: Round [87] log likelihood: -2434291.206124
EM: Round [88] log likelihood: -2434291.198633
EM: Round [89] log likelihood: -2434291.191427
EM: Round [90] log likelihood: -2434291.184494
EM: Round [91] log likelihood: -2434291.177821
EM: Round [92] log likelihood: -2434291.171399
EM: Round [93] log likelihood: -2434291.165217
EM: Round [94] log likelihood: -2434291.159264
EM: Round [95] log likelihood: -2434291.153531
EM: Round [96] log likelihood: -2434291.148009
EM: Round [97] log likelihood: -2434291.142690
EM: Round [98] log likelihood: -2434291.137564
EM: Round [99] log likelihood: -2434291.132625
EM: Round [100] log likelihood: -2434291.127865
EM: Round [101] log likelihood: -2434291.123277
EM: Round [102] log likelihood: -2434291.118853
EM: Round [103] log likelihood: -2434291.114587
EM: Round [104] log likelihood: -2434291.110473
EM: Round [105] log likelihood: -2434291.106506
EM: Round [106] log likelihood: -2434291.102678
EM: Round [107] log likelihood: -2434291.098985
EM: Round [108] log likelihood: -2434291.095422
EM: Round [109] log likelihood: -2434291.091984
EM: Round [110] log likelihood: -2434291.088665
EM: Round [111] log likelihood: -2434291.085462
EM: Round [112] log likelihood: -2434291.082369
EM: Round [113] log likelihood: -2434291.079383
EM: Round [114] log likelihood: -2434291.076499
EM: Round [115] log likelihood: -2434291.073714
EM: Round [116] log likelihood: -2434291.071025
EM: Round [117] log likelihood: -2434291.068426
EM: Round [118] log likelihood: -2434291.065916
EM: Round [119] log likelihood: -2434291.063491
EM: Round [120] log likelihood: -2434291.061147
EM: Round [121] log likelihood: -2434291.058882
EM: Round [122] log likelihood: -2434291.056692
EM: Round [123] log likelihood: -2434291.054576
EM: Round [124] log likelihood: -2434291.052530
EM: Round [125] log likelihood: -2434291.050552
EM: Round [126] log likelihood: -2434291.048639
EM: Round [127] log likelihood: -2434291.046790
EM: Round [128] log likelihood: -2434291.045001
EM: Round [129] log likelihood: -2434291.043270
EM: Round [130] log likelihood: -2434291.041596
EM: Round [131] log likelihood: -2434291.039977
EM: Round [132] log likelihood: -2434291.038410
EM: Round [133] log likelihood: -2434291.036894
EM: Round [134] log likelihood: -2434291.035427
EM: Round [135] log likelihood: -2434291.034007
EM: Round [136] log likelihood: -2434291.032633
EM: Round [137] log likelihood: -2434291.031303
EM: Round [138] log likelihood: -2434291.030015
EM: Round [139] log likelihood: -2434291.028768
EM: Round [140] log likelihood: -2434291.027561
EM: Round [141] log likelihood: -2434291.026392
EM: Round [142] log likelihood: -2434291.025259
EM: Round [143] log likelihood: -2434291.024163
EM: Round [144] log likelihood: -2434291.023101
EM: Round [145] log likelihood: -2434291.022072
EM: Round [146] log likelihood: -2434291.021075
EM: Round [147] log likelihood: -2434291.020110
EM: Round [148] log likelihood: -2434291.019174
EM: Round [149] log likelihood: -2434291.018268
EM: Round [150] log likelihood: -2434291.017389
EM: Round [151] log likelihood: -2434291.016537
EM: Round [152] log likelihood: -2434291.015712
EM: Round [153] log likelihood: -2434291.014912
EM: Round [154] log likelihood: -2434291.014137
EM: Round [155] log likelihood: -2434291.013385
EM: Round [156] log likelihood: -2434291.012656
EM: Round [157] log likelihood: -2434291.011949
EM: Round [158] log likelihood: -2434291.011264
EM: Round [159] log likelihood: -2434291.010599
EM: Round [160] log likelihood: -2434291.009954
EM: Round [161] log likelihood: -2434291.009329
EM: Round [162] log likelihood: -2434291.008723
EM: Round [163] log likelihood: -2434291.008134
EM: Round [164] log likelihood: -2434291.007563
EM: Round [165] log likelihood: -2434291.007010
EM: Round [166] log likelihood: -2434291.006472
EM: Round [167] log likelihood: -2434291.005951
EM: Round [168] log likelihood: -2434291.005445
EM: Round [169] log likelihood: -2434291.004954
EM: Round [170] log likelihood: -2434291.004477
EM: Round [171] log likelihood: -2434291.004015
EM: Round [172] log likelihood: -2434291.003566
EM: Round [173] log likelihood: -2434291.003130
EM: Round [174] log likelihood: -2434291.002706
EM: Round [175] log likelihood: -2434291.002295
EM: Round [176] log likelihood: -2434291.001896
EM: Round [177] log likelihood: -2434291.001509
EM: Round [178] log likelihood: -2434291.001133
EM: Round [179] log likelihood: -2434291.000767
EM: Round [180] log likelihood: -2434291.000413
EM: Round [181] log likelihood: -2434291.000068
EM: Round [182] log likelihood: -2434290.999733
EM: Round [183] log likelihood: -2434290.999408
EM: Round [184] log likelihood: -2434290.999092
EM: Round [185] log likelihood: -2434290.998785
EM: Round [186] log likelihood: -2434290.998486
EM: Round [187] log likelihood: -2434290.998197
EM: Round [188] log likelihood: -2434290.997915
EM: Round [189] log likelihood: -2434290.997641
EM: Round [190] log likelihood: -2434290.997375
EM: Round [191] log likelihood: -2434290.997117
EM: Round [192] log likelihood: -2434290.996865
EM: Round [193] log likelihood: -2434290.996621
EM: Round [194] log likelihood: -2434290.996383
EM: Round [195] log likelihood: -2434290.996153
EM: Round [196] log likelihood: -2434290.995928
EM: Round [197] log likelihood: -2434290.995710
EM: Round [198] log likelihood: -2434290.995498
EM: Round [199] log likelihood: -2434290.995291
EM: Round [200] log likelihood: -2434290.995091
EM: Round [201] log likelihood: -2434290.994895
EM: Round [202] log likelihood: -2434290.994706
EM: Round [203] log likelihood: -2434290.994521
EM: Round [204] log likelihood: -2434290.994341
EM: Round [205] log likelihood: -2434290.994167
EM: Round [206] log likelihood: -2434290.993997
EM: Round [207] log likelihood: -2434290.993832
EM: Round [208] log likelihood: -2434290.993671
EM: Round [209] log likelihood: -2434290.993514
EM: Round [210] log likelihood: -2434290.993362
EM: Round [211] log likelihood: -2434290.993214
EM: Round [212] log likelihood: -2434290.993070
EM: Round [213] log likelihood: -2434290.992929
EM: Round [214] log likelihood: -2434290.992793
EM: Round [215] log likelihood: -2434290.992660
EM: Round [216] log likelihood: -2434290.992530
EM: Round [217] log likelihood: -2434290.992404
EM: Round [218] log likelihood: -2434290.992282
EM: Round [219] log likelihood: -2434290.992162
EM: Round [220] log likelihood: -2434290.992046
EM: Round [221] log likelihood: -2434290.991933
EM: Round [222] log likelihood: -2434290.991823
EM: Round [223] log likelihood: -2434290.991716
EM: Round [224] log likelihood: -2434290.991611
EM: Round [225] log likelihood: -2434290.991509
EM: Round [226] log likelihood: -2434290.991410
EM: Stopping iterations at round 226 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -2421440.977385
EM: Round [1] log likelihood: -2421035.632879
EM: Round [2] log likelihood: -2420914.392723
EM: Round [3] log likelihood: -2420860.149178
EM: Round [4] log likelihood: -2420832.067159
EM: Round [5] log likelihood: -2420816.336956
EM: Round [6] log likelihood: -2420806.973114
EM: Round [7] log likelihood: -2420801.085206
EM: Round [8] log likelihood: -2420797.191716
EM: Round [9] log likelihood: -2420794.498662
EM: Round [10] log likelihood: -2420792.562581
EM: Round [11] log likelihood: -2420791.125233
EM: Round [12] log likelihood: -2420790.029739
EM: Round [13] log likelihood: -2420789.176766
EM: Round [14] log likelihood: -2420788.500912
EM: Round [15] log likelihood: -2420787.957577
EM: Round [16] log likelihood: -2420787.515390
EM: Round [17] log likelihood: -2420787.151700
EM: Round [18] log likelihood: -2420786.849781
EM: Round [19] log likelihood: -2420786.597048
EM: Round [20] log likelihood: -2420786.383881
EM: Round [21] log likelihood: -2420786.202826
EM: Round [22] log likelihood: -2420786.048042
EM: Round [23] log likelihood: -2420785.914903
EM: Round [24] log likelihood: -2420785.799715
EM: Round [25] log likelihood: -2420785.699504
EM: Round [26] log likelihood: -2420785.611860
EM: Round [27] log likelihood: -2420785.534815
EM: Round [28] log likelihood: -2420785.466756
EM: Round [29] log likelihood: -2420785.406352
EM: Round [30] log likelihood: -2420785.352498
EM: Round [31] log likelihood: -2420785.304276
EM: Round [32] log likelihood: -2420785.260914
EM: Round [33] log likelihood: -2420785.221768
EM: Round [34] log likelihood: -2420785.186291
EM: Round [35] log likelihood: -2420785.154021
EM: Round [36] log likelihood: -2420785.124565
EM: Round [37] log likelihood: -2420785.097589
EM: Round [38] log likelihood: -2420785.072805
EM: Round [39] log likelihood: -2420785.049966
EM: Round [40] log likelihood: -2420785.028859
EM: Round [41] log likelihood: -2420785.009301
EM: Round [42] log likelihood: -2420784.991132
EM: Round [43] log likelihood: -2420784.974211
EM: Round [44] log likelihood: -2420784.958418
EM: Round [45] log likelihood: -2420784.943645
EM: Round [46] log likelihood: -2420784.929799
EM: Round [47] log likelihood: -2420784.916796
EM: Round [48] log likelihood: -2420784.904564
EM: Round [49] log likelihood: -2420784.893037
EM: Round [50] log likelihood: -2420784.882157
EM: Round [51] log likelihood: -2420784.871873
EM: Round [52] log likelihood: -2420784.862137
EM: Round [53] log likelihood: -2420784.852909
EM: Round [54] log likelihood: -2420784.844151
EM: Round [55] log likelihood: -2420784.835828
EM: Round [56] log likelihood: -2420784.827911
EM: Round [57] log likelihood: -2420784.820372
EM: Round [58] log likelihood: -2420784.813185
EM: Round [59] log likelihood: -2420784.806327
EM: Round [60] log likelihood: -2420784.799777
EM: Round [61] log likelihood: -2420784.793517
EM: Round [62] log likelihood: -2420784.787528
EM: Round [63] log likelihood: -2420784.781793
EM: Round [64] log likelihood: -2420784.776299
EM: Round [65] log likelihood: -2420784.771032
EM: Round [66] log likelihood: -2420784.765978
EM: Round [67] log likelihood: -2420784.761126
EM: Round [68] log likelihood: -2420784.756465
EM: Round [69] log likelihood: -2420784.751985
EM: Round [70] log likelihood: -2420784.747676
EM: Round [71] log likelihood: -2420784.743530
EM: Round [72] log likelihood: -2420784.739538
EM: Round [73] log likelihood: -2420784.735693
EM: Round [74] log likelihood: -2420784.731988
EM: Round [75] log likelihood: -2420784.728416
EM: Round [76] log likelihood: -2420784.724970
EM: Round [77] log likelihood: -2420784.721646
EM: Round [78] log likelihood: -2420784.718436
EM: Round [79] log likelihood: -2420784.715337
EM: Round [80] log likelihood: -2420784.712343
EM: Round [81] log likelihood: -2420784.709450
EM: Round [82] log likelihood: -2420784.706653
EM: Round [83] log likelihood: -2420784.703949
EM: Round [84] log likelihood: -2420784.701333
EM: Round [85] log likelihood: -2420784.698802
EM: Round [86] log likelihood: -2420784.696351
EM: Round [87] log likelihood: -2420784.693980
EM: Round [88] log likelihood: -2420784.691682
EM: Round [89] log likelihood: -2420784.689457
EM: Round [90] log likelihood: -2420784.687302
EM: Round [91] log likelihood: -2420784.685212
EM: Round [92] log likelihood: -2420784.683187
EM: Round [93] log likelihood: -2420784.681223
EM: Round [94] log likelihood: -2420784.679319
EM: Round [95] log likelihood: -2420784.677472
EM: Round [96] log likelihood: -2420784.675680
EM: Round [97] log likelihood: -2420784.673941
EM: Round [98] log likelihood: -2420784.672253
EM: Round [99] log likelihood: -2420784.670615
EM: Round [100] log likelihood: -2420784.669025
EM: Round [101] log likelihood: -2420784.667480
EM: Round [102] log likelihood: -2420784.665980
EM: Round [103] log likelihood: -2420784.664523
EM: Round [104] log likelihood: -2420784.663108
EM: Round [105] log likelihood: -2420784.661733
EM: Round [106] log likelihood: -2420784.660396
EM: Round [107] log likelihood: -2420784.659098
EM: Round [108] log likelihood: -2420784.657835
EM: Round [109] log likelihood: -2420784.656608
EM: Round [110] log likelihood: -2420784.655415
EM: Round [111] log likelihood: -2420784.654254
EM: Round [112] log likelihood: -2420784.653126
EM: Round [113] log likelihood: -2420784.652029
EM: Round [114] log likelihood: -2420784.650961
EM: Round [115] log likelihood: -2420784.649923
EM: Round [116] log likelihood: -2420784.648913
EM: Round [117] log likelihood: -2420784.647930
EM: Round [118] log likelihood: -2420784.646973
EM: Round [119] log likelihood: -2420784.646042
EM: Round [120] log likelihood: -2420784.645137
EM: Round [121] log likelihood: -2420784.644255
EM: Round [122] log likelihood: -2420784.643397
EM: Round [123] log likelihood: -2420784.642561
EM: Round [124] log likelihood: -2420784.641748
EM: Round [125] log likelihood: -2420784.640956
EM: Round [126] log likelihood: -2420784.640185
EM: Round [127] log likelihood: -2420784.639434
EM: Round [128] log likelihood: -2420784.638703
EM: Round [129] log likelihood: -2420784.637991
EM: Round [130] log likelihood: -2420784.637297
EM: Round [131] log likelihood: -2420784.636621
EM: Round [132] log likelihood: -2420784.635963
EM: Round [133] log likelihood: -2420784.635322
EM: Round [134] log likelihood: -2420784.634698
EM: Round [135] log likelihood: -2420784.634090
EM: Round [136] log likelihood: -2420784.633497
EM: Round [137] log likelihood: -2420784.632919
EM: Round [138] log likelihood: -2420784.632357
EM: Round [139] log likelihood: -2420784.631808
EM: Round [140] log likelihood: -2420784.631274
EM: Round [141] log likelihood: -2420784.630753
EM: Round [142] log likelihood: -2420784.630245
EM: Round [143] log likelihood: -2420784.629751
EM: Round [144] log likelihood: -2420784.629269
EM: Round [145] log likelihood: -2420784.628799
EM: Round [146] log likelihood: -2420784.628341
EM: Round [147] log likelihood: -2420784.627894
EM: Round [148] log likelihood: -2420784.627459
EM: Round [149] log likelihood: -2420784.627034
EM: Round [150] log likelihood: -2420784.626621
EM: Round [151] log likelihood: -2420784.626217
EM: Round [152] log likelihood: -2420784.625824
EM: Round [153] log likelihood: -2420784.625441
EM: Round [154] log likelihood: -2420784.625067
EM: Round [155] log likelihood: -2420784.624702
EM: Round [156] log likelihood: -2420784.624347
EM: Round [157] log likelihood: -2420784.624000
EM: Round [158] log likelihood: -2420784.623662
EM: Round [159] log likelihood: -2420784.623332
EM: Round [160] log likelihood: -2420784.623011
EM: Round [161] log likelihood: -2420784.622697
EM: Round [162] log likelihood: -2420784.622391
EM: Round [163] log likelihood: -2420784.622093
EM: Round [164] log likelihood: -2420784.621802
EM: Round [165] log likelihood: -2420784.621518
EM: Round [166] log likelihood: -2420784.621242
EM: Round [167] log likelihood: -2420784.620972
EM: Round [168] log likelihood: -2420784.620708
EM: Round [169] log likelihood: -2420784.620451
EM: Round [170] log likelihood: -2420784.620201
EM: Round [171] log likelihood: -2420784.619956
EM: Round [172] log likelihood: -2420784.619718
EM: Round [173] log likelihood: -2420784.619485
EM: Round [174] log likelihood: -2420784.619258
EM: Round [175] log likelihood: -2420784.619036
EM: Round [176] log likelihood: -2420784.618820
EM: Round [177] log likelihood: -2420784.618609
EM: Round [178] log likelihood: -2420784.618403
EM: Round [179] log likelihood: -2420784.618203
EM: Round [180] log likelihood: -2420784.618007
EM: Round [181] log likelihood: -2420784.617816
EM: Round [182] log likelihood: -2420784.617629
EM: Round [183] log likelihood: -2420784.617447
EM: Round [184] log likelihood: -2420784.617269
EM: Round [185] log likelihood: -2420784.617096
EM: Round [186] log likelihood: -2420784.616927
EM: Round [187] log likelihood: -2420784.616762
EM: Round [188] log likelihood: -2420784.616601
EM: Round [189] log likelihood: -2420784.616443
EM: Round [190] log likelihood: -2420784.616290
EM: Round [191] log likelihood: -2420784.616140
EM: Round [192] log likelihood: -2420784.615994
EM: Round [193] log likelihood: -2420784.615851
EM: Round [194] log likelihood: -2420784.615712
EM: Round [195] log likelihood: -2420784.615576
EM: Round [196] log likelihood: -2420784.615443
EM: Round [197] log likelihood: -2420784.615314
EM: Round [198] log likelihood: -2420784.615187
EM: Round [199] log likelihood: -2420784.615064
EM: Round [200] log likelihood: -2420784.614943
EM: Round [201] log likelihood: -2420784.614826
EM: Round [202] log likelihood: -2420784.614711
EM: Round [203] log likelihood: -2420784.614599
EM: Round [204] log likelihood: -2420784.614489
EM: Round [205] log likelihood: -2420784.614382
EM: Round [206] log likelihood: -2420784.614278
EM: Round [207] log likelihood: -2420784.614176
EM: Round [208] log likelihood: -2420784.614077
EM: Stopping iterations at round 208 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.2tayf1wUFG/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20  --fusion_preds /tmp/nxf.2tayf1wUFG/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.2tayf1wUFG/ctat_genome_lib_build_dir 
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.2tayf1wUFG/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.2tayf1wUFG/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.2tayf1wUFG/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter  --genome_lib_dir /tmp/nxf.2tayf1wUFG/ctat_genome_lib_build_dir  --max_promiscuity 10  --min_pct_dom_promiscuity 20 
CMD: cp /tmp/nxf.2tayf1wUFG/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.2tayf1wUFG/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.2tayf1wUFG/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.2tayf1wUFG/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.2tayf1wUFG/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.2tayf1wUFG/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.2tayf1wUFG/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 296071600 > /tmp/nxf.2tayf1wUFG/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.2tayf1wUFG/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.2tayf1wUFG/ctat_genome_lib_build_dir > /tmp/nxf.2tayf1wUFG/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.2tayf1wUFG/ctat_genome_lib_build_dir --annotate /tmp/nxf.2tayf1wUFG/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.2tayf1wUFG/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.2tayf1wUFG/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.2tayf1wUFG/ctat_genome_lib_build_dir
-done, see /tmp/nxf.2tayf1wUFG/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.2tayf1wUFG/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.2tayf1wUFG/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 1172, filtered: 5426)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.2tayf1wUFG/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.2tayf1wUFG/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl  --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.2tayf1wUFG/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000239268.3]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000234715.2]
WARNING, no entry stored in dbm for [ENSG00000267523.1]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000254485.5]
WARNING, no entry stored in dbm for [ENSG00000230559.1]
WARNING, no entry stored in dbm for [ENSG00000176700.20]
WARNING, no entry stored in dbm for [ENSG00000282057.1]
WARNING, no entry stored in dbm for [ENSG00000284977.2]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000235749.3]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000268081.1]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000280136.2]
WARNING, no entry stored in dbm for [ENSG00000172965.17]
WARNING, no entry stored in dbm for [ENSG00000204745.4]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000280136.2]
WARNING, no entry stored in dbm for [ENSG00000205534.6]
WARNING, no entry stored in dbm for [ENSG00000234420.7]
WARNING, no entry stored in dbm for [ENSG00000226049.3]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000230116.1]
WARNING, no entry stored in dbm for [ENSG00000271699.5]
WARNING, no entry stored in dbm for [ENSG00000237137.1]
WARNING, no entry stored in dbm for [ENSG00000261722.1]
WARNING, no entry stored in dbm for [ENSG00000276758.1]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000225292.2]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000287411.1]
WARNING, no entry stored in dbm for [ENSG00000272655.2]
WARNING, no entry stored in dbm for [ENSG00000232599.1]
WARNING, no entry stored in dbm for [ENSG00000274712.2]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000205534.6]
WARNING, no entry stored in dbm for [ENSG00000225594.1]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000251129.2]
WARNING, no entry stored in dbm for [ENSG00000234928.1]
WARNING, no entry stored in dbm for [ENSG00000227755.1]
WARNING, no entry stored in dbm for [ENSG00000233930.4]
WARNING, no entry stored in dbm for [ENSG00000286948.1]
WARNING, no entry stored in dbm for [ENSG00000229739.4]
WARNING, no entry stored in dbm for [ENSG00000214433.4]
WARNING, no entry stored in dbm for [ENSG00000239268.3]
WARNING, no entry stored in dbm for [ENSG00000232599.1]
WARNING, no entry stored in dbm for [ENSG00000266904.6]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000255052.5]
WARNING, no entry stored in dbm for [ENSG00000254016.3]
WARNING, no entry stored in dbm for [ENSG00000235501.6]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000226310.1]
WARNING, no entry stored in dbm for [ENSG00000261329.6]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000267196.1]
WARNING, no entry stored in dbm for [ENSG00000234928.1]
WARNING, no entry stored in dbm for [ENSG00000227755.1]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000259692.6]
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000272601.1]
WARNING, no entry stored in dbm for [ENSG00000276868.1]
WARNING, no entry stored in dbm for [ENSG00000248927.1]
WARNING, no entry stored in dbm for [ENSG00000282508.2]
WARNING, no entry stored in dbm for [ENSG00000233930.4]
WARNING, no entry stored in dbm for [ENSG00000286948.1]
WARNING, no entry stored in dbm for [ENSG00000259673.6]
WARNING, no entry stored in dbm for [ENSG00000286349.1]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000236499.2]
WARNING, no entry stored in dbm for [ENSG00000270025.2]
WARNING, no entry stored in dbm for [ENSG00000243289.1]
WARNING, no entry stored in dbm for [ENSG00000225292.2]
WARNING, no entry stored in dbm for [ENSG00000234911.2]
WARNING, no entry stored in dbm for [ENSG00000249348.1]
WARNING, no entry stored in dbm for [ENSG00000231760.5]
WARNING, no entry stored in dbm for [ENSG00000230116.1]
WARNING, no entry stored in dbm for [ENSG00000280007.1]
WARNING, no entry stored in dbm for [ENSG00000203739.4]
WARNING, no entry stored in dbm for [ENSG00000241350.1]
WARNING, no entry stored in dbm for [ENSG00000286830.1]
WARNING, no entry stored in dbm for [ENSG00000255550.1]
WARNING, no entry stored in dbm for [ENSG00000214807.2]
WARNING, no entry stored in dbm for [ENSG00000226703.1]
WARNING, no entry stored in dbm for [ENSG00000254349.6]
WARNING, no entry stored in dbm for [ENSG00000231793.5]
WARNING, no entry stored in dbm for [ENSG00000257612.2]
WARNING, no entry stored in dbm for [ENSG00000224609.8]
WARNING, no entry stored in dbm for [ENSG00000154608.14]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000231964.1]
WARNING, no entry stored in dbm for [ENSG00000284964.1]
WARNING, no entry stored in dbm for [ENSG00000274423.1]
WARNING, no entry stored in dbm for [ENSG00000280136.2]
WARNING, no entry stored in dbm for [ENSG00000226049.3]
WARNING, no entry stored in dbm for [ENSG00000254444.1]
WARNING, no entry stored in dbm for [ENSG00000277977.1]
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000282458.1]
WARNING, no entry stored in dbm for [ENSG00000287262.1]
WARNING, no entry stored in dbm for [ENSG00000276868.1]
WARNING, no entry stored in dbm for [ENSG00000227681.5]
WARNING, no entry stored in dbm for [ENSG00000227681.5]
WARNING, no entry stored in dbm for [ENSG00000267750.6]
WARNING, no entry stored in dbm for [ENSG00000223508.5]
WARNING, no entry stored in dbm for [ENSG00000223508.5]
WARNING, no entry stored in dbm for [ENSG00000242941.1]
WARNING, no entry stored in dbm for [ENSG00000204194.1]
WARNING, no entry stored in dbm for [ENSG00000154608.14]
WARNING, no entry stored in dbm for [ENSG00000273125.2]
WARNING, no entry stored in dbm for [ENSG00000287765.1]
WARNING, no entry stored in dbm for [ENSG00000218643.2]
WARNING, no entry stored in dbm for [ENSG00000224910.2]
WARNING, no entry stored in dbm for [ENSG00000231605.6]
WARNING, no entry stored in dbm for [ENSG00000281404.2]
WARNING, no entry stored in dbm for [ENSG00000280809.4]
WARNING, no entry stored in dbm for [ENSG00000254034.2]
WARNING, no entry stored in dbm for [ENSG00000204622.11]
WARNING, no entry stored in dbm for [ENSG00000225851.1]
WARNING, no entry stored in dbm for [ENSG00000233299.1]
WARNING, no entry stored in dbm for [ENSG00000250227.1]
WARNING, no entry stored in dbm for [ENSG00000286458.1]
WARNING, no entry stored in dbm for [ENSG00000234273.1]
WARNING, no entry stored in dbm for [ENSG00000233025.1]
WARNING, no entry stored in dbm for [ENSG00000260896.6]
WARNING, no entry stored in dbm for [ENSG00000259755.1]
WARNING, no entry stored in dbm for [ENSG00000223602.2]
WARNING, no entry stored in dbm for [ENSG00000258314.3]
WARNING, no entry stored in dbm for [ENSG00000235749.3]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000215022.7]
WARNING, no entry stored in dbm for [ENSG00000223804.5]
WARNING, no entry stored in dbm for [ENSG00000223779.6]
WARNING, no entry stored in dbm for [ENSG00000279047.4]
WARNING, no entry stored in dbm for [ENSG00000225370.1]
WARNING, no entry stored in dbm for [ENSG00000275557.1]
WARNING, no entry stored in dbm for [ENSG00000274423.1]
WARNING, no entry stored in dbm for [ENSG00000282572.2]
WARNING, no entry stored in dbm for [ENSG00000241860.7]
WARNING, no entry stored in dbm for [ENSG00000287129.1]
WARNING, no entry stored in dbm for [ENSG00000231646.6]
WARNING, no entry stored in dbm for [ENSG00000287676.1]
WARNING, no entry stored in dbm for [ENSG00000288620.1]
WARNING, no entry stored in dbm for [ENSG00000288620.1]
WARNING, no entry stored in dbm for [ENSG00000187953.10]
WARNING, no entry stored in dbm for [ENSG00000213963.6]
WARNING, no entry stored in dbm for [ENSG00000282890.1]
WARNING, no entry stored in dbm for [ENSG00000068781.21]
WARNING, no entry stored in dbm for [ENSG00000274712.2]
WARNING, no entry stored in dbm for [ENSG00000254610.3]
WARNING, no entry stored in dbm for [ENSG00000273819.1]
WARNING, no entry stored in dbm for [ENSG00000231646.6]
WARNING, no entry stored in dbm for [ENSG00000287129.1]
WARNING, no entry stored in dbm for [ENSG00000224430.2]
WARNING, no entry stored in dbm for [ENSG00000255585.3]
WARNING, no entry stored in dbm for [ENSG00000204623.9]
WARNING, no entry stored in dbm for [ENSG00000215537.3]
WARNING, no entry stored in dbm for [ENSG00000282826.2]
WARNING, no entry stored in dbm for [ENSG00000261618.2]
WARNING, no entry stored in dbm for [ENSG00000133624.13]
WARNING, no entry stored in dbm for [ENSG00000233694.6]
WARNING, no entry stored in dbm for [ENSG00000287011.1]
WARNING, no entry stored in dbm for [ENSG00000267254.7]
WARNING, no entry stored in dbm for [ENSG00000223965.2]
WARNING, no entry stored in dbm for [ENSG00000286451.1]
WARNING, no entry stored in dbm for [ENSG00000288262.1]
WARNING, no entry stored in dbm for [ENSG00000214559.3]
WARNING, no entry stored in dbm for [ENSG00000285551.2]
WARNING, no entry stored in dbm for [ENSG00000277077.1]
WARNING, no entry stored in dbm for [ENSG00000224208.1]
WARNING, no entry stored in dbm for [ENSG00000236829.9]
WARNING, no entry stored in dbm for [ENSG00000281357.3]
WARNING, no entry stored in dbm for [ENSG00000226641.1]
WARNING, no entry stored in dbm for [ENSG00000280414.1]
WARNING, no entry stored in dbm for [ENSG00000250331.2]
WARNING, no entry stored in dbm for [ENSG00000287530.1]
WARNING, no entry stored in dbm for [ENSG00000226210.3]
WARNING, no entry stored in dbm for [ENSG00000213943.3]
WARNING, no entry stored in dbm for [ENSG00000253948.2]
WARNING, no entry stored in dbm for [ENSG00000280029.4]
WARNING, no entry stored in dbm for [ENSG00000260128.6]
WARNING, no entry stored in dbm for [ENSG00000226688.7]
WARNING, no entry stored in dbm for [ENSG00000231649.3]
WARNING, no entry stored in dbm for [ENSG00000181984.11]
WARNING, no entry stored in dbm for [ENSG00000286694.1]
WARNING, no entry stored in dbm for [ENSG00000237989.1]
WARNING, no entry stored in dbm for [ENSG00000230407.1]
WARNING, no entry stored in dbm for [ENSG00000235782.1]
WARNING, no entry stored in dbm for [ENSG00000213449.2]
WARNING, no entry stored in dbm for [ENSG00000225626.4]
WARNING, no entry stored in dbm for [ENSG00000228818.1]
WARNING, no entry stored in dbm for [ENSG00000254701.3]
WARNING, no entry stored in dbm for [ENSG00000230937.12]
WARNING, no entry stored in dbm for [ENSG00000281103.2]
WARNING, no entry stored in dbm for [ENSG00000184106.8]
WARNING, no entry stored in dbm for [ENSG00000241657.1]
WARNING, no entry stored in dbm for [ENSG00000244627.5]
WARNING, no entry stored in dbm for [ENSG00000264113.2]
WARNING, no entry stored in dbm for [ENSG00000232894.1]
WARNING, no entry stored in dbm for [ENSG00000235421.1]
WARNING, no entry stored in dbm for [ENSG00000203739.4]
WARNING, no entry stored in dbm for [ENSG00000253279.6]
WARNING, no entry stored in dbm for [ENSG00000231312.7]
WARNING, no entry stored in dbm for [ENSG00000259343.7]
WARNING, no entry stored in dbm for [ENSG00000256417.1]
WARNING, no entry stored in dbm for [ENSG00000203876.10]
WARNING, no entry stored in dbm for [ENSG00000231185.7]
WARNING, no entry stored in dbm for [ENSG00000231881.2]
WARNING, no entry stored in dbm for [ENSG00000219642.2]
WARNING, no entry stored in dbm for [ENSG00000286308.1]
WARNING, no entry stored in dbm for [ENSG00000264538.6]
WARNING, no entry stored in dbm for [ENSG00000247708.8]
WARNING, no entry stored in dbm for [ENSG00000280310.1]
WARNING, no entry stored in dbm for [ENSG00000245694.10]
WARNING, no entry stored in dbm for [ENSG00000230246.7]
WARNING, no entry stored in dbm for [ENSG00000271364.1]
WARNING, no entry stored in dbm for [ENSG00000269893.8]
WARNING, no entry stored in dbm for [ENSG00000250988.7]
WARNING, no entry stored in dbm for [ENSG00000260630.7]
WARNING, no entry stored in dbm for [ENSG00000248445.5]
WARNING, no entry stored in dbm for [ENSG00000248121.8]
WARNING, no entry stored in dbm for [ENSG00000287920.1]
WARNING, no entry stored in dbm for [ENSG00000283426.1]
WARNING, no entry stored in dbm for [ENSG00000185485.14]
WARNING, no entry stored in dbm for [ENSG00000258232.2]
WARNING, no entry stored in dbm for [ENSG00000285051.2]
WARNING, no entry stored in dbm for [ENSG00000286856.1]
WARNING, no entry stored in dbm for [ENSG00000278969.1]
WARNING, no entry stored in dbm for [ENSG00000256982.2]
WARNING, no entry stored in dbm for [ENSG00000254838.5]
WARNING, no entry stored in dbm for [ENSG00000286247.1]
WARNING, no entry stored in dbm for [ENSG00000262801.6]
WARNING, no entry stored in dbm for [ENSG00000251613.4]
WARNING, no entry stored in dbm for [ENSG00000241888.2]
WARNING, no entry stored in dbm for [ENSG00000168852.13]
WARNING, no entry stored in dbm for [ENSG00000250596.2]
WARNING, no entry stored in dbm for [ENSG00000185986.12]
WARNING, no entry stored in dbm for [ENSG00000188002.10]
WARNING, no entry stored in dbm for [ENSG00000185986.12]
WARNING, no entry stored in dbm for [ENSG00000236760.1]
WARNING, no entry stored in dbm for [ENSG00000283366.2]
WARNING, no entry stored in dbm for [ENSG00000272070.1]
WARNING, no entry stored in dbm for [ENSG00000227681.5]
WARNING, no entry stored in dbm for [ENSG00000272030.1]
WARNING, no entry stored in dbm for [ENSG00000284858.1]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000220848.5]
WARNING, no entry stored in dbm for [ENSG00000238069.1]
WARNING, no entry stored in dbm for [ENSG00000244705.1]
WARNING, no entry stored in dbm for [ENSG00000238069.1]
WARNING, no entry stored in dbm for [ENSG00000244705.1]
WARNING, no entry stored in dbm for [ENSG00000226448.1]
WARNING, no entry stored in dbm for [ENSG00000242071.3]
WARNING, no entry stored in dbm for [ENSG00000242445.1]
WARNING, no entry stored in dbm for [ENSG00000226448.1]
WARNING, no entry stored in dbm for [ENSG00000241228.1]
WARNING, no entry stored in dbm for [ENSG00000233609.3]
WARNING, no entry stored in dbm for [ENSG00000175779.4]
WARNING, no entry stored in dbm for [ENSG00000243333.3]
WARNING, no entry stored in dbm for [ENSG00000255794.9]
WARNING, no entry stored in dbm for [ENSG00000255794.9]
WARNING, no entry stored in dbm for [ENSG00000243970.3]
WARNING, no entry stored in dbm for [ENSG00000154874.15]
WARNING, no entry stored in dbm for [ENSG00000283698.1]
WARNING, no entry stored in dbm for [ENSG00000278292.1]
WARNING, no entry stored in dbm for [ENSG00000236088.10]
WARNING, no entry stored in dbm for [ENSG00000229419.1]
WARNING, no entry stored in dbm for [ENSG00000237938.5]
WARNING, no entry stored in dbm for [ENSG00000224114.1]
WARNING, no entry stored in dbm for [ENSG00000280407.2]
WARNING, no entry stored in dbm for [ENSG00000256069.7]
WARNING, no entry stored in dbm for [ENSG00000248367.1]
WARNING, no entry stored in dbm for [ENSG00000203739.4]
WARNING, no entry stored in dbm for [ENSG00000203739.4]
WARNING, no entry stored in dbm for [ENSG00000203739.4]
WARNING, no entry stored in dbm for [ENSG00000269350.1]
WARNING, no entry stored in dbm for [ENSG00000099725.14]
WARNING, no entry stored in dbm for [ENSG00000279418.1]
WARNING, no entry stored in dbm for [ENSG00000241350.1]
WARNING, no entry stored in dbm for [ENSG00000241350.1]
WARNING, no entry stored in dbm for [ENSG00000230395.1]
WARNING, no entry stored in dbm for [ENSG00000285955.1]
WARNING, no entry stored in dbm for [ENSG00000227973.1]
WARNING, no entry stored in dbm for [ENSG00000214184.3]
WARNING, no entry stored in dbm for [ENSG00000225012.5]
WARNING, no entry stored in dbm for [ENSG00000225647.2]
WARNING, no entry stored in dbm for [ENSG00000205918.9]
WARNING, no entry stored in dbm for [ENSG00000261288.1]
WARNING, no entry stored in dbm for [ENSG00000254987.1]
WARNING, no entry stored in dbm for [ENSG00000229739.4]
WARNING, no entry stored in dbm for [ENSG00000229739.4]
WARNING, no entry stored in dbm for [ENSG00000231254.2]
WARNING, no entry stored in dbm for [ENSG00000236438.7]
WARNING, no entry stored in dbm for [ENSG00000236438.7]
WARNING, no entry stored in dbm for [ENSG00000236438.7]
WARNING, no entry stored in dbm for [ENSG00000248668.3]
WARNING, no entry stored in dbm for [ENSG00000249740.3]
WARNING, no entry stored in dbm for [ENSG00000183444.10]
WARNING, no entry stored in dbm for [ENSG00000168992.4]
WARNING, no entry stored in dbm for [ENSG00000213790.2]
WARNING, no entry stored in dbm for [ENSG00000247556.6]
WARNING, no entry stored in dbm for [ENSG00000225484.7]
WARNING, no entry stored in dbm for [ENSG00000235859.5]
WARNING, no entry stored in dbm for [ENSG00000261584.1]
WARNING, no entry stored in dbm for [ENSG00000263327.6]
WARNING, no entry stored in dbm for [ENSG00000247809.9]
WARNING, no entry stored in dbm for [ENSG00000280134.1]
WARNING, no entry stored in dbm for [ENSG00000188599.17]
WARNING, no entry stored in dbm for [ENSG00000188599.17]
WARNING, no entry stored in dbm for [ENSG00000278530.4]
WARNING, no entry stored in dbm for [ENSG00000123009.4]
WARNING, no entry stored in dbm for [ENSG00000229338.1]
WARNING, no entry stored in dbm for [ENSG00000245213.7]
WARNING, no entry stored in dbm for [ENSG00000253604.1]
WARNING, no entry stored in dbm for [ENSG00000247199.5]
WARNING, no entry stored in dbm for [ENSG00000261008.7]
WARNING, no entry stored in dbm for [ENSG00000228224.3]
WARNING, no entry stored in dbm for [ENSG00000267779.7]
WARNING, no entry stored in dbm for [ENSG00000249196.6]
WARNING, no entry stored in dbm for [ENSG00000235122.4]
WARNING, no entry stored in dbm for [ENSG00000248994.2]
WARNING, no entry stored in dbm for [ENSG00000236051.7]
WARNING, no entry stored in dbm for [ENSG00000246985.8]
WARNING, no entry stored in dbm for [ENSG00000178722.13]
WARNING, no entry stored in dbm for [ENSG00000228340.6]
WARNING, no entry stored in dbm for [ENSG00000228319.1]
WARNING, no entry stored in dbm for [ENSG00000283117.1]
WARNING, no entry stored in dbm for [ENSG00000245864.3]
WARNING, no entry stored in dbm for [ENSG00000224430.2]
WARNING, no entry stored in dbm for [ENSG00000271978.1]
WARNING, no entry stored in dbm for [ENSG00000283196.2]
WARNING, no entry stored in dbm for [ENSG00000267519.6]
WARNING, no entry stored in dbm for [ENSG00000227110.7]
WARNING, no entry stored in dbm for [ENSG00000249096.7]
WARNING, no entry stored in dbm for [ENSG00000234663.7]
WARNING, no entry stored in dbm for [ENSG00000234663.7]
WARNING, no entry stored in dbm for [ENSG00000226383.7]
WARNING, no entry stored in dbm for [ENSG00000226383.7]
WARNING, no entry stored in dbm for [ENSG00000231646.6]
WARNING, no entry stored in dbm for [ENSG00000234928.1]
WARNING, no entry stored in dbm for [ENSG00000227755.1]
WARNING, no entry stored in dbm for [ENSG00000261008.7]
WARNING, no entry stored in dbm for [ENSG00000228065.11]
WARNING, no entry stored in dbm for [ENSG00000235437.8]
WARNING, no entry stored in dbm for [ENSG00000266979.1]
WARNING, no entry stored in dbm for [ENSG00000234807.7]
WARNING, no entry stored in dbm for [ENSG00000268754.4]
WARNING, no entry stored in dbm for [ENSG00000182648.13]
WARNING, no entry stored in dbm for [ENSG00000285294.1]
WARNING, no entry stored in dbm for [ENSG00000239883.8]
WARNING, no entry stored in dbm for [ENSG00000225269.3]
WARNING, no entry stored in dbm for [ENSG00000215190.9]
WARNING, no entry stored in dbm for [ENSG00000261824.7]
WARNING, no entry stored in dbm for [ENSG00000223546.7]
WARNING, no entry stored in dbm for [ENSG00000250585.3]
WARNING, no entry stored in dbm for [ENSG00000223685.6]
WARNING, no entry stored in dbm for [ENSG00000250682.6]
WARNING, no entry stored in dbm for [ENSG00000188185.13]
WARNING, no entry stored in dbm for [ENSG00000225880.5]
WARNING, no entry stored in dbm for [ENSG00000281896.1]
WARNING, no entry stored in dbm for [ENSG00000237984.3]
WARNING, no entry stored in dbm for [ENSG00000235077.1]
WARNING, no entry stored in dbm for [ENSG00000229320.3]
WARNING, no entry stored in dbm for [ENSG00000215333.3]
WARNING, no entry stored in dbm for [ENSG00000257746.2]
WARNING, no entry stored in dbm for [ENSG00000235257.9]
WARNING, no entry stored in dbm for [ENSG00000282572.2]
WARNING, no entry stored in dbm for [ENSG00000236778.8]
WARNING, no entry stored in dbm for [ENSG00000226721.2]
WARNING, no entry stored in dbm for [ENSG00000286675.1]
WARNING, no entry stored in dbm for [ENSG00000285219.2]
WARNING, no entry stored in dbm for [ENSG00000287524.1]
WARNING, no entry stored in dbm for [ENSG00000287524.1]
WARNING, no entry stored in dbm for [ENSG00000287524.1]
WARNING, no entry stored in dbm for [ENSG00000236124.1]
WARNING, no entry stored in dbm for [ENSG00000230459.3]
WARNING, no entry stored in dbm for [ENSG00000213707.2]
WARNING, no entry stored in dbm for [ENSG00000270060.1]
WARNING, no entry stored in dbm for [ENSG00000233514.1]
WARNING, no entry stored in dbm for [ENSG00000257125.1]
WARNING, no entry stored in dbm for [ENSG00000248205.1]
WARNING, no entry stored in dbm for [ENSG00000261716.2]
WARNING, no entry stored in dbm for [ENSG00000258741.4]
WARNING, no entry stored in dbm for [ENSG00000232226.2]
WARNING, no entry stored in dbm for [ENSG00000183666.17]
WARNING, no entry stored in dbm for [ENSG00000255760.2]
WARNING, no entry stored in dbm for [ENSG00000227038.3]
WARNING, no entry stored in dbm for [ENSG00000224273.2]
WARNING, no entry stored in dbm for [ENSG00000226400.2]
WARNING, no entry stored in dbm for [ENSG00000284108.1]
WARNING, no entry stored in dbm for [ENSG00000201658.1]
WARNING, no entry stored in dbm for [ENSG00000242759.8]
WARNING, no entry stored in dbm for [ENSG00000241111.1]
WARNING, no entry stored in dbm for [ENSG00000259479.6]
WARNING, no entry stored in dbm for [ENSG00000281741.2]
WARNING, no entry stored in dbm for [ENSG00000240253.6]
WARNING, no entry stored in dbm for [ENSG00000255052.5]
WARNING, no entry stored in dbm for [ENSG00000254016.3]
WARNING, no entry stored in dbm for [ENSG00000273018.7]
WARNING, no entry stored in dbm for [ENSG00000154874.15]
WARNING, no entry stored in dbm for [ENSG00000224216.1]
WARNING, no entry stored in dbm for [ENSG00000232416.3]
WARNING, no entry stored in dbm for [ENSG00000242262.1]
WARNING, no entry stored in dbm for [ENSG00000258454.1]
WARNING, no entry stored in dbm for [ENSG00000253204.1]
WARNING, no entry stored in dbm for [ENSG00000180385.8]
WARNING, no entry stored in dbm for [ENSG00000261008.7]
WARNING, no entry stored in dbm for [ENSG00000233426.3]
WARNING, no entry stored in dbm for [ENSG00000262884.1]
WARNING, no entry stored in dbm for [ENSG00000243289.1]
WARNING, no entry stored in dbm for [ENSG00000257222.1]
WARNING, no entry stored in dbm for [ENSG00000273356.1]
WARNING, no entry stored in dbm for [ENSG00000267106.8]
WARNING, no entry stored in dbm for [ENSG00000286401.1]
WARNING, no entry stored in dbm for [ENSG00000199568.1]
WARNING, no entry stored in dbm for [ENSG00000261670.1]
WARNING, no entry stored in dbm for [ENSG00000254033.1]
WARNING, no entry stored in dbm for [ENSG00000272888.7]
WARNING, no entry stored in dbm for [ENSG00000267594.5]
WARNING, no entry stored in dbm for [ENSG00000130612.16]
WARNING, no entry stored in dbm for [ENSG00000256612.7]
WARNING, no entry stored in dbm for [ENSG00000236088.10]
WARNING, no entry stored in dbm for [ENSG00000272168.8]
WARNING, no entry stored in dbm for [ENSG00000249035.7]
WARNING, no entry stored in dbm for [ENSG00000260735.2]
WARNING, no entry stored in dbm for [ENSG00000205559.5]
WARNING, no entry stored in dbm for [ENSG00000249699.1]
WARNING, no entry stored in dbm for [ENSG00000251992.1]
WARNING, no entry stored in dbm for [ENSG00000268912.1]
WARNING, no entry stored in dbm for [ENSG00000224043.8]
WARNING, no entry stored in dbm for [ENSG00000228666.1]
WARNING, no entry stored in dbm for [ENSG00000217896.2]
WARNING, no entry stored in dbm for [ENSG00000228564.2]
WARNING, no entry stored in dbm for [ENSG00000260274.1]
WARNING, no entry stored in dbm for [ENSG00000244716.3]
WARNING, no entry stored in dbm for [ENSG00000271705.1]
WARNING, no entry stored in dbm for [ENSG00000280424.1]
WARNING, no entry stored in dbm for [ENSG00000216657.1]
WARNING, no entry stored in dbm for [ENSG00000235499.1]
WARNING, no entry stored in dbm for [ENSG00000272168.8]
WARNING, no entry stored in dbm for [ENSG00000248334.6]
WARNING, no entry stored in dbm for [ENSG00000251667.1]
WARNING, no entry stored in dbm for [ENSG00000242338.6]
WARNING, no entry stored in dbm for [ENSG00000286156.1]
WARNING, no entry stored in dbm for [ENSG00000234420.7]
WARNING, no entry stored in dbm for [ENSG00000253223.1]
WARNING, no entry stored in dbm for [ENSG00000243970.3]
WARNING, no entry stored in dbm for [ENSG00000254153.1]
WARNING, no entry stored in dbm for [ENSG00000278593.1]
WARNING, no entry stored in dbm for [ENSG00000260372.7]
WARNING, no entry stored in dbm for [ENSG00000250519.7]
WARNING, no entry stored in dbm for [ENSG00000286731.1]
WARNING, no entry stored in dbm for [ENSG00000247137.9]
WARNING, no entry stored in dbm for [ENSG00000226474.1]
WARNING, no entry stored in dbm for [ENSG00000258027.2]
WARNING, no entry stored in dbm for [ENSG00000230092.7]
WARNING, no entry stored in dbm for [ENSG00000228427.3]
WARNING, no entry stored in dbm for [ENSG00000203279.4]
WARNING, no entry stored in dbm for [ENSG00000223583.1]
WARNING, no entry stored in dbm for [ENSG00000225891.2]
WARNING, no entry stored in dbm for [ENSG00000286840.1]
WARNING, no entry stored in dbm for [ENSG00000237208.1]
WARNING, no entry stored in dbm for [ENSG00000287811.1]
WARNING, no entry stored in dbm for [ENSG00000232499.2]
WARNING, no entry stored in dbm for [ENSG00000287398.1]
WARNING, no entry stored in dbm for [ENSG00000235020.5]
WARNING, no entry stored in dbm for [ENSG00000234640.1]
WARNING, no entry stored in dbm for [ENSG00000213058.3]
WARNING, no entry stored in dbm for [ENSG00000235582.2]
WARNING, no entry stored in dbm for [ENSG00000215016.2]
WARNING, no entry stored in dbm for [ENSG00000287564.1]
WARNING, no entry stored in dbm for [ENSG00000259719.6]
WARNING, no entry stored in dbm for [ENSG00000272463.1]
WARNING, no entry stored in dbm for [ENSG00000226355.2]
WARNING, no entry stored in dbm for [ENSG00000228430.9]
WARNING, no entry stored in dbm for [ENSG00000259133.5]
WARNING, no entry stored in dbm for [ENSG00000229019.1]
WARNING, no entry stored in dbm for [ENSG00000284986.1]
WARNING, no entry stored in dbm for [ENSG00000287126.1]
WARNING, no entry stored in dbm for [ENSG00000231563.2]
WARNING, no entry stored in dbm for [ENSG00000283773.1]
WARNING, no entry stored in dbm for [ENSG00000287449.1]
WARNING, no entry stored in dbm for [ENSG00000261011.1]
WARNING, no entry stored in dbm for [ENSG00000243289.1]
WARNING, no entry stored in dbm for [ENSG00000285941.1]
WARNING, no entry stored in dbm for [ENSG00000276805.2]
WARNING, no entry stored in dbm for [ENSG00000225012.5]
WARNING, no entry stored in dbm for [ENSG00000261116.1]
WARNING, no entry stored in dbm for [ENSG00000288543.1]
WARNING, no entry stored in dbm for [ENSG00000238290.1]
WARNING, no entry stored in dbm for [ENSG00000279833.1]
WARNING, no entry stored in dbm for [ENSG00000264618.2]
WARNING, no entry stored in dbm for [ENSG00000232218.1]
WARNING, no entry stored in dbm for [ENSG00000286652.1]
WARNING, no entry stored in dbm for [ENSG00000176659.9]
WARNING, no entry stored in dbm for [ENSG00000229723.1]
WARNING, no entry stored in dbm for [ENSG00000233817.1]
WARNING, no entry stored in dbm for [ENSG00000288620.1]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000287682.1]
WARNING, no entry stored in dbm for [ENSG00000285062.1]
WARNING, no entry stored in dbm for [ENSG00000275431.1]
WARNING, no entry stored in dbm for [ENSG00000283483.1]
WARNING, no entry stored in dbm for [ENSG00000284964.1]
WARNING, no entry stored in dbm for [ENSG00000224216.1]
WARNING, no entry stored in dbm for [ENSG00000176183.8]
WARNING, no entry stored in dbm for [ENSG00000214748.2]
WARNING, no entry stored in dbm for [ENSG00000249592.6]
WARNING, no entry stored in dbm for [ENSG00000249806.1]
WARNING, no entry stored in dbm for [ENSG00000260735.2]
WARNING, no entry stored in dbm for [ENSG00000229930.1]
WARNING, no entry stored in dbm for [ENSG00000257506.1]
WARNING, no entry stored in dbm for [ENSG00000259925.1]
WARNING, no entry stored in dbm for [ENSG00000248376.2]
WARNING, no entry stored in dbm for [ENSG00000244086.1]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000229930.1]
WARNING, no entry stored in dbm for [ENSG00000244513.7]
WARNING, no entry stored in dbm for [ENSG00000277544.1]
WARNING, no entry stored in dbm for [ENSG00000287565.1]
WARNING, no entry stored in dbm for [ENSG00000249650.1]
WARNING, no entry stored in dbm for [ENSG00000225475.1]
WARNING, no entry stored in dbm for [ENSG00000227745.1]
WARNING, no entry stored in dbm for [ENSG00000287676.1]
WARNING, no entry stored in dbm for [ENSG00000287676.1]
WARNING, no entry stored in dbm for [ENSG00000277007.1]
WARNING, no entry stored in dbm for [ENSG00000228303.1]
WARNING, no entry stored in dbm for [ENSG00000280119.1]
WARNING, no entry stored in dbm for [ENSG00000256625.1]
WARNING, no entry stored in dbm for [ENSG00000288568.1]
WARNING, no entry stored in dbm for [ENSG00000276538.1]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000226833.6]
WARNING, no entry stored in dbm for [ENSG00000265936.1]
WARNING, no entry stored in dbm for [ENSG00000214259.3]
WARNING, no entry stored in dbm for [ENSG00000273270.1]
WARNING, no entry stored in dbm for [ENSG00000257645.1]
WARNING, no entry stored in dbm for [ENSG00000277654.6]
WARNING, no entry stored in dbm for [ENSG00000100181.22]
WARNING, no entry stored in dbm for [ENSG00000285744.1]
WARNING, no entry stored in dbm for [ENSG00000279940.1]
WARNING, no entry stored in dbm for [ENSG00000237773.7]
WARNING, no entry stored in dbm for [ENSG00000272693.4]
WARNING, no entry stored in dbm for [ENSG00000227113.2]
WARNING, no entry stored in dbm for [ENSG00000286401.1]
WARNING, no entry stored in dbm for [ENSG00000256364.1]
WARNING, no entry stored in dbm for [ENSG00000286675.1]
WARNING, no entry stored in dbm for [ENSG00000254266.6]
WARNING, no entry stored in dbm for [ENSG00000279905.1]
WARNING, no entry stored in dbm for [ENSG00000280331.1]
WARNING, no entry stored in dbm for [ENSG00000259299.1]
WARNING, no entry stored in dbm for [ENSG00000267002.4]
WARNING, no entry stored in dbm for [ENSG00000236814.1]
WARNING, no entry stored in dbm for [ENSG00000248932.6]
WARNING, no entry stored in dbm for [ENSG00000248932.6]
WARNING, no entry stored in dbm for [ENSG00000188002.10]
WARNING, no entry stored in dbm for [ENSG00000258732.1]
WARNING, no entry stored in dbm for [ENSG00000180229.12]
WARNING, no entry stored in dbm for [ENSG00000258732.1]
WARNING, no entry stored in dbm for [ENSG00000180229.12]
WARNING, no entry stored in dbm for [ENSG00000286193.2]
WARNING, no entry stored in dbm for [ENSG00000285999.1]
WARNING, no entry stored in dbm for [ENSG00000285329.1]
WARNING, no entry stored in dbm for [ENSG00000255621.1]
WARNING, no entry stored in dbm for [ENSG00000253636.1]
WARNING, no entry stored in dbm for [ENSG00000272800.3]
WARNING, no entry stored in dbm for [ENSG00000272800.3]
WARNING, no entry stored in dbm for [ENSG00000279569.1]
WARNING, no entry stored in dbm for [ENSG00000279317.2]
WARNING, no entry stored in dbm for [ENSG00000287858.1]
WARNING, no entry stored in dbm for [ENSG00000231646.6]
WARNING, no entry stored in dbm for [ENSG00000239775.1]
WARNING, no entry stored in dbm for [ENSG00000222705.1]
WARNING, no entry stored in dbm for [ENSG00000233862.7]
WARNING, no entry stored in dbm for [ENSG00000285106.2]
WARNING, no entry stored in dbm for [ENSG00000237844.2]
WARNING, no entry stored in dbm for [ENSG00000267605.7]
WARNING, no entry stored in dbm for [ENSG00000285582.1]
WARNING, no entry stored in dbm for [ENSG00000271018.1]
WARNING, no entry stored in dbm for [ENSG00000224237.1]
WARNING, no entry stored in dbm for [ENSG00000267383.7]
WARNING, no entry stored in dbm for [ENSG00000228495.2]
WARNING, no entry stored in dbm for [ENSG00000254162.1]
WARNING, no entry stored in dbm for [ENSG00000287216.1]
WARNING, no entry stored in dbm for [ENSG00000111788.10]
WARNING, no entry stored in dbm for [ENSG00000260422.1]
WARNING, no entry stored in dbm for [ENSG00000225448.1]
WARNING, no entry stored in dbm for [ENSG00000224435.2]
WARNING, no entry stored in dbm for [ENSG00000284649.1]
WARNING, no entry stored in dbm for [ENSG00000284671.1]
WARNING, no entry stored in dbm for [ENSG00000280152.1]
WARNING, no entry stored in dbm for [ENSG00000279529.1]
WARNING, no entry stored in dbm for [ENSG00000279529.1]
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000230189.7]
WARNING, no entry stored in dbm for [ENSG00000244510.2]
WARNING, no entry stored in dbm for [ENSG00000257261.6]
WARNING, no entry stored in dbm for [ENSG00000267009.6]
WARNING, no entry stored in dbm for [ENSG00000244055.2]
WARNING, no entry stored in dbm for [ENSG00000231412.2]
WARNING, no entry stored in dbm for [ENSG00000230305.2]
WARNING, no entry stored in dbm for [ENSG00000214243.3]
WARNING, no entry stored in dbm for [ENSG00000241057.2]
WARNING, no entry stored in dbm for [ENSG00000239556.4]
WARNING, no entry stored in dbm for [ENSG00000230333.6]
WARNING, no entry stored in dbm for [ENSG00000268163.1]
WARNING, no entry stored in dbm for [ENSG00000267698.1]
WARNING, no entry stored in dbm for [ENSG00000242156.1]
WARNING, no entry stored in dbm for [ENSG00000180581.7]
WARNING, no entry stored in dbm for [ENSG00000261738.7]
WARNING, no entry stored in dbm for [ENSG00000231646.6]
WARNING, no entry stored in dbm for [ENSG00000287129.1]
WARNING, no entry stored in dbm for [ENSG00000285051.2]
WARNING, no entry stored in dbm for [ENSG00000282458.1]


	* STAR-Fusion complete.  See output: /tmp/nxf.2tayf1wUFG/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)