Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/48/83ce8b1d8ee4d980e7c7e6393d02ff/659_bNS-T1-TRNA-1_B23MHV2LT4_1
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1b/49751134a77f94c95c19a959ca9cc6/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1b/49751134a77f94c95c19a959ca9cc6/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3e/f8271ed2be3691f13987d7493b736a/659_bNS-T1-TRNA-1_B23MHV2LT4_1.sample_qc.tsv
==> STAGING COMPLETE (4 inputs)

Processing Kallisto file: 659_bNS-T1-TRNA-1_B23MHV2LT4_1/abundance.h5
Successfully converted 659_bNS-T1-TRNA-1_B23MHV2LT4_1/abundance.h5 to 659_bNS-T1-TRNA-1_B23MHV2LT4_1_kallisto_mqc.tsv
  Sample: 659_bNS-T1-TRNA-1_B23MHV2LT4_1
  Mean Fragment Length: 137.1 bp
  Median Fragment Length: 126.0 bp
  pct_mito_est_counts: 0.021%
  pct_ribo_est_counts: 1.446%
  pct_hk_est_counts: 0.571%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.045%
  pct_ribo_tpm: 4.263%
  pct_hk_tpm: 0.847%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 5.925%