Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e0/fca8a6c00c7041ff38f8ed0c671d09/659_mK-T1-TRNA-2_B23MHV2LT4_1.features.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3b/0b61fa71d4e1a93040aa6f3ba2b72f/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3b/0b61fa71d4e1a93040aa6f3ba2b72f/.command.run
==> STAGING COMPLETE (3 inputs)

Predicting contamination for 1 sample(s)...
Detection threshold: VAF_p90 < 0.9999
Level estimation: contamination_pct = -215.87 * vaf_p90 + 215.65

  659_mK-T1-TRNA-2_B23MHV2LT4_1: vaf_p90=0.999663 -> CONTAMINATED (~0.0%)

Output saved to: 659_mK-T1-TRNA-2_B23MHV2LT4_1.predictions.csv
Summary: 1/1 samples flagged as contaminated