AIH curated blacklist: matched 11 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 322
Pass (FILTER=PASS): 86 (26.7%)
Fail (FILTER=FAIL): 236 (73.3%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 11
All 11 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 86
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 26
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 13
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 13
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 13
confidence_below_min(low<high): 11
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 10
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 8
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 8
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 7
confidence_below_min(low<high);total_reads_below_min(7.0<8.0): 6
confidence_below_min(medium<high);aih_curated_blacklist: 6
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 6
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 5
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 5
Breakdown by confidence:
high: 86 pass, 4 fail (total: 90)
low: 0 pass, 96 fail (total: 96)
medium: 0 pass, 136 fail (total: 136)
Arriba filter: 322 rows -> 86 PASS; wrote 659_epG-T1-TRNA-1_B23MHV2LT4_1.arriba.fusions.filtered.tsv and 659_epG-T1-TRNA-1_B23MHV2LT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: 659_epG-T1-TRNA-1_B23MHV2LT4_1.arriba.fusions.filter_summary.txt