Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d5/21305242fe570c31f14b417b63abdb/659_buj-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/de/4efb2a5172e52ebf32049db02717b0/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/de/4efb2a5172e52ebf32049db02717b0/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory
ls: *.crai: No such file or directory