.command.log - Workdir - NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_WHOLE_BAM_SATURATION (FFPE_V4_0001_RNA_0003_B23MHV2LT4_2)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/bb/e5070dc3a0214bba86abc9dcf19904/.command.log
Size: 720 bytes
Task: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_WHOLE_BAM_SATURATION (FFPE_V4_0001_RNA_0003_B23MHV2LT4_2)
Attempt

Content

  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/87/24c42721c91137560ead4787167f43/FFPE_V4_0001_RNA_0003_B23MHV2LT4_2.md.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/bb/e5070dc3a0214bba86abc9dcf19904/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/bb/e5070dc3a0214bba86abc9dcf19904/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/87/24c42721c91137560ead4787167f43/FFPE_V4_0001_RNA_0003_B23MHV2LT4_2.md.bam
==> STAGING COMPLETE (4 inputs)

+ seqtool saturation -region chr20 FFPE_V4_0001_RNA_0003_B23MHV2LT4_2.md.bam
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0003_B23MHV2LT4_2.md.bai