Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/93/22b1a0433e64cf0c2e31c19b93e3da/659_cwv-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/66/c145d3663d5ce09164cf3aa8797fa5/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/66/c145d3663d5ce09164cf3aa8797fa5/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory
ls: *.crai: No such file or directory