Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/af/41f20202801fcc0507eafe2ab4b76c/659_Mt-T1-TRNA-1_B23MHV2LT4_1.star_alignment.Aligned.sortedByCoord.out.cram
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c3/61e5b24f1b7632dcef5087a63f4a62/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c3/61e5b24f1b7632dcef5087a63f4a62/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.bai: No such file or directory
ls: *.csi: No such file or directory