nfcore/rnafusion summary report

Databases: COSMIC Mitelman FusionGDB2

Score: 0.625 (explain)

Explained score: 0.5 * (0.125 + 0.125) + 0.5 * (0.500 + 0.500 + 0.000)

position: chr2:42264731:+#chr2:29223528:-
junction_reads: 235
spanning_reads: 0
ffmp: 0.7954

position: chr2:42264731#chr2:29223528
reading-frame: in-frame
type: inversion
split_reads1: 82
split_reads2: 125
discordant_mates: 0
coverage1: 3692
coverage2: 2149
confidence: high

{'starfusion': {'position': 'chr2:42264731:+#chr2:29223528:-', 'junction_reads': 235, 'spanning_reads': 0, 'ffmp': 0.7954}, 'arriba': {'position': 'chr2:42264731#chr2:29223528', 'reading-frame': 'in-frame', 'type': 'inversion', 'split_reads1': '82', 'split_reads2': '125', 'discordant_mates': '0', 'coverage1': '3692', 'coverage2': '2149', 'confidence': 'high'}}

EML4--ALK