Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/80/4314317d0cfe6d7e89afc427761d0f/659_bMa-T1-TRNA-1_B23MHV2LT4_1_1.fastp.fastq.gz
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a6/b32051bd26e39b0e0479b5f2da3258/.command.sh
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/80/4314317d0cfe6d7e89afc427761d0f/659_bMa-T1-TRNA-1_B23MHV2LT4_1_2.fastp.fastq.gz
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a6/b32051bd26e39b0e0479b5f2da3258/.command.run
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9f/ac5fa0604f5965c14eced2773443f2/659_bMa-T1-TRNA-1_B23MHV2LT4_1.Chimeric.out.junction
==> STAGING COMPLETE (6 inputs)
-ctat genome lib [/tmp/nxf.OJN3WsxxQr/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.OJN3WsxxQr/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.OJN3WsxxQr/./star-fusion.preliminary
-sample contains 161561760 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.OJN3WsxxQr/ctat_genome_lib_build_dir -J /tmp/nxf.OJN3WsxxQr/659_bMa-T1-TRNA-1_B23MHV2LT4_1.Chimeric.out.junction -O /tmp/nxf.OJN3WsxxQr/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4
-parsing fusion evidence: /tmp/nxf.OJN3WsxxQr/659_bMa-T1-TRNA-1_B23MHV2LT4_1.Chimeric.out.junction
-building interval tree based on /tmp/nxf.OJN3WsxxQr/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes
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[1760000], rate=103631.01/min -building interval tree based on /tmp/nxf.OJN3WsxxQr/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes
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[1750000], rate=85504.89/min -building interval tree based on /tmp/nxf.OJN3WsxxQr/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.12 min).
-mapping reads to genes
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[1580000], rate=79197.99/min
[1590000], rate=78973.51/min
[1600000], rate=78817.73/min
[1610000], rate=78728.61/min
[1620000], rate=78577.20/min
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[1640000], rate=78406.37/min
[1650000], rate=78260.87/min
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[1670000], rate=78098.21/min
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[1700000], rate=77862.60/min
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[1720000], rate=77886.79/min
[1730000], rate=77927.93/min
[1740000], rate=77968.63/min
[1750000], rate=78125.00/min -building interval tree based on /tmp/nxf.OJN3WsxxQr/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes
[10000], rate=85714.29/min
[20000], rate=92307.69/min
[30000], rate=94736.84/min
[40000], rate=100000.00/min
[50000], rate=100000.00/min
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[100000], rate=98360.66/min
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[1430000], rate=74543.87/min
[1440000], rate=74226.80/min
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[1480000], rate=73509.93/min
[1490000], rate=73399.01/min
[1500000], rate=73349.63/min
[1510000], rate=73241.71/min
[1520000], rate=73194.22/min
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[1560000], rate=73239.44/min
[1570000], rate=73250.39/min
[1580000], rate=73317.87/min
[1590000], rate=73384.62/min
[1600000], rate=73450.65/min
[1610000], rate=73460.08/min
[1620000], rate=73524.96/min
[1630000], rate=73644.58/min
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[1660000], rate=74107.14/min
[1670000], rate=74332.34/min
[1680000], rate=74501.11/min
[1690000], rate=74668.63/min
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[1710000], rate=75109.81/min
[1720000], rate=75328.47/min
[1730000], rate=75217.39/min
[1740000], rate=74946.16/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.OJN3WsxxQr/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.OJN3WsxxQr/ctat_genome_lib_build_dir --filt_file /tmp/nxf.OJN3WsxxQr/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.OJN3WsxxQr/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-parsing /tmp/nxf.OJN3WsxxQr/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.
6000000.00 reads per min processed...
12000000.00 reads per min processed...
9000000.00 reads per min processed...
12000000.00 reads per min processed...
10000000.00 reads per min processed...
9000000.00 reads per min processed...
8400000.00 reads per min processed...
6857142.86 reads per min processed...
6750000.00 reads per min processed...
6000000.00 reads per min processed...
6000000.00 reads per min processed...
5538461.54 reads per min processed...
5571428.57 reads per min processed...
5250000.00 reads per min processed...
5294117.65 reads per min processed...
5052631.58 reads per min processed...
5100000.00 reads per min processed...
4909090.91 reads per min processed...
4956521.74 reads per min processed...
4800000.00 reads per min processed...
4666666.67 reads per min processed...
4551724.14 reads per min processed...
4600000.00 reads per min processed...
4500000.00 reads per min processed...
4545454.55 reads per min processed...
4457142.86 reads per min processed...
4500000.00 reads per min processed...
4421052.63 reads per min processed...
4461538.46 reads per min processed...
4500000.00 reads per min processed...
4428571.43 reads per min processed...
4465116.28 reads per min processed...
4500000.00 reads per min processed...
4434782.61 reads per min processed...
4565217.39 reads per min processed...
4595744.68 reads per min processed...
4723404.26 reads per min processed...
4750000.00 reads per min processed...
4875000.00 reads per min processed...
4897959.18 reads per min processed...
5020408.16 reads per min processed...
4941176.47 reads per min processed...
4961538.46 reads per min processed...
4888888.89 reads per min processed...
4909090.91 reads per min processed...
4928571.43 reads per min processed...
4862068.97 reads per min processed...
4881355.93 reads per min processed...
4900000.00 reads per min processed...
4838709.68 reads per min processed...
4857142.86 reads per min processed...
4875000.00 reads per min processed...
4818181.82 reads per min processed...
4835820.90 reads per min processed...
4782608.70 reads per min processed...
4800000.00 reads per min processed...
4750000.00 reads per min processed...
4767123.29 reads per min processed...
4720000.00 reads per min processed...
4736842.11 reads per min processed...
done.
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.OJN3WsxxQr/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.OJN3WsxxQr/./star-fusion.preliminary/star-fusion
-parsing fusion evidence: /tmp/nxf.OJN3WsxxQr/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.OJN3WsxxQr/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.OJN3WsxxQr/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.OJN3WsxxQr/659_bMa-T1-TRNA-1_B23MHV2LT4_1.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.OJN3WsxxQr/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.OJN3WsxxQr/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.OJN3WsxxQr/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -170742.688529
EM: Round [1] log likelihood: -170623.949193
EM: Round [2] log likelihood: -170579.823959
EM: Round [3] log likelihood: -170558.944533
EM: Round [4] log likelihood: -170547.963585
EM: Round [5] log likelihood: -170541.780227
EM: Round [6] log likelihood: -170538.097749
EM: Round [7] log likelihood: -170535.788108
EM: Round [8] log likelihood: -170534.267219
EM: Round [9] log likelihood: -170533.220037
EM: Round [10] log likelihood: -170532.469974
EM: Round [11] log likelihood: -170531.914160
EM: Round [12] log likelihood: -170531.490307
EM: Round [13] log likelihood: -170531.159242
EM: Round [14] log likelihood: -170530.895422
EM: Round [15] log likelihood: -170530.681626
EM: Round [16] log likelihood: -170530.505885
EM: Round [17] log likelihood: -170530.359652
EM: Round [18] log likelihood: -170530.236683
EM: Round [19] log likelihood: -170530.132315
EM: Round [20] log likelihood: -170530.043007
EM: Round [21] log likelihood: -170529.966026
EM: Round [22] log likelihood: -170529.899231
EM: Round [23] log likelihood: -170529.840929
EM: Round [24] log likelihood: -170529.789761
EM: Round [25] log likelihood: -170529.744629
EM: Round [26] log likelihood: -170529.704637
EM: Round [27] log likelihood: -170529.669046
EM: Round [28] log likelihood: -170529.637247
EM: Round [29] log likelihood: -170529.608728
EM: Round [30] log likelihood: -170529.583061
EM: Round [31] log likelihood: -170529.559885
EM: Round [32] log likelihood: -170529.538892
EM: Round [33] log likelihood: -170529.519822
EM: Round [34] log likelihood: -170529.502449
EM: Round [35] log likelihood: -170529.486580
EM: Round [36] log likelihood: -170529.472050
EM: Round [37] log likelihood: -170529.458713
EM: Round [38] log likelihood: -170529.446444
EM: Round [39] log likelihood: -170529.435132
EM: Round [40] log likelihood: -170529.424682
EM: Round [41] log likelihood: -170529.415009
EM: Round [42] log likelihood: -170529.406038
EM: Round [43] log likelihood: -170529.397704
EM: Round [44] log likelihood: -170529.389948
EM: Round [45] log likelihood: -170529.382719
EM: Round [46] log likelihood: -170529.375970
EM: Round [47] log likelihood: -170529.369660
EM: Round [48] log likelihood: -170529.363752
EM: Round [49] log likelihood: -170529.358214
EM: Round [50] log likelihood: -170529.353015
EM: Round [51] log likelihood: -170529.348128
EM: Round [52] log likelihood: -170529.343530
EM: Round [53] log likelihood: -170529.339199
EM: Round [54] log likelihood: -170529.335114
EM: Round [55] log likelihood: -170529.331258
EM: Round [56] log likelihood: -170529.327615
EM: Round [57] log likelihood: -170529.324169
EM: Round [58] log likelihood: -170529.320906
EM: Round [59] log likelihood: -170529.317816
EM: Round [60] log likelihood: -170529.314885
EM: Round [61] log likelihood: -170529.312104
EM: Round [62] log likelihood: -170529.309463
EM: Round [63] log likelihood: -170529.306953
EM: Round [64] log likelihood: -170529.304566
EM: Round [65] log likelihood: -170529.302294
EM: Round [66] log likelihood: -170529.300131
EM: Round [67] log likelihood: -170529.298070
EM: Round [68] log likelihood: -170529.296105
EM: Round [69] log likelihood: -170529.294231
EM: Round [70] log likelihood: -170529.292442
EM: Round [71] log likelihood: -170529.290734
EM: Round [72] log likelihood: -170529.289103
EM: Round [73] log likelihood: -170529.287543
EM: Round [74] log likelihood: -170529.286052
EM: Round [75] log likelihood: -170529.284625
EM: Round [76] log likelihood: -170529.283260
EM: Round [77] log likelihood: -170529.281953
EM: Round [78] log likelihood: -170529.280701
EM: Round [79] log likelihood: -170529.279502
EM: Round [80] log likelihood: -170529.278352
EM: Round [81] log likelihood: -170529.277250
EM: Round [82] log likelihood: -170529.276193
EM: Round [83] log likelihood: -170529.275178
EM: Round [84] log likelihood: -170529.274205
EM: Round [85] log likelihood: -170529.273270
EM: Round [86] log likelihood: -170529.272373
EM: Round [87] log likelihood: -170529.271511
EM: Round [88] log likelihood: -170529.270683
EM: Round [89] log likelihood: -170529.269888
EM: Round [90] log likelihood: -170529.269123
EM: Round [91] log likelihood: -170529.268387
EM: Round [92] log likelihood: -170529.267680
EM: Round [93] log likelihood: -170529.267000
EM: Round [94] log likelihood: -170529.266345
EM: Round [95] log likelihood: -170529.265716
EM: Round [96] log likelihood: -170529.265110
EM: Round [97] log likelihood: -170529.264526
EM: Round [98] log likelihood: -170529.263964
EM: Round [99] log likelihood: -170529.263423
EM: Round [100] log likelihood: -170529.262902
EM: Round [101] log likelihood: -170529.262401
EM: Round [102] log likelihood: -170529.261917
EM: Round [103] log likelihood: -170529.261451
EM: Round [104] log likelihood: -170529.261002
EM: Round [105] log likelihood: -170529.260569
EM: Round [106] log likelihood: -170529.260152
EM: Round [107] log likelihood: -170529.259750
EM: Round [108] log likelihood: -170529.259362
EM: Round [109] log likelihood: -170529.258988
EM: Round [110] log likelihood: -170529.258627
EM: Round [111] log likelihood: -170529.258279
EM: Round [112] log likelihood: -170529.257943
EM: Round [113] log likelihood: -170529.257619
EM: Round [114] log likelihood: -170529.257306
EM: Round [115] log likelihood: -170529.257005
EM: Round [116] log likelihood: -170529.256714
EM: Round [117] log likelihood: -170529.256433
EM: Round [118] log likelihood: -170529.256161
EM: Round [119] log likelihood: -170529.255900
EM: Round [120] log likelihood: -170529.255647
EM: Round [121] log likelihood: -170529.255403
EM: Round [122] log likelihood: -170529.255167
EM: Round [123] log likelihood: -170529.254939
EM: Round [124] log likelihood: -170529.254719
EM: Round [125] log likelihood: -170529.254507
EM: Round [126] log likelihood: -170529.254302
EM: Round [127] log likelihood: -170529.254103
EM: Round [128] log likelihood: -170529.253912
EM: Round [129] log likelihood: -170529.253727
EM: Round [130] log likelihood: -170529.253548
EM: Round [131] log likelihood: -170529.253375
EM: Round [132] log likelihood: -170529.253209
EM: Round [133] log likelihood: -170529.253047
EM: Round [134] log likelihood: -170529.252891
EM: Round [135] log likelihood: -170529.252741
EM: Round [136] log likelihood: -170529.252595
EM: Round [137] log likelihood: -170529.252454
EM: Round [138] log likelihood: -170529.252318
EM: Round [139] log likelihood: -170529.252186
EM: Round [140] log likelihood: -170529.252059
EM: Round [141] log likelihood: -170529.251936
EM: Round [142] log likelihood: -170529.251817
EM: Round [143] log likelihood: -170529.251702
EM: Round [144] log likelihood: -170529.251591
EM: Round [145] log likelihood: -170529.251483
EM: Round [146] log likelihood: -170529.251379
EM: Round [147] log likelihood: -170529.251278
EM: Round [148] log likelihood: -170529.251181
EM: Stopping iterations at round 148 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -170569.917180
EM: Round [1] log likelihood: -170474.922945
EM: Round [2] log likelihood: -170440.936739
EM: Round [3] log likelihood: -170425.061207
EM: Round [4] log likelihood: -170416.744159
EM: Round [5] log likelihood: -170412.075062
EM: Round [6] log likelihood: -170409.308438
EM: Round [7] log likelihood: -170407.586494
EM: Round [8] log likelihood: -170406.463994
EM: Round [9] log likelihood: -170405.700326
EM: Round [10] log likelihood: -170405.160507
EM: Round [11] log likelihood: -170404.765934
EM: Round [12] log likelihood: -170404.469097
EM: Round [13] log likelihood: -170404.240222
EM: Round [14] log likelihood: -170404.059997
EM: Round [15] log likelihood: -170403.915493
EM: Round [16] log likelihood: -170403.797803
EM: Round [17] log likelihood: -170403.700631
EM: Round [18] log likelihood: -170403.619426
EM: Round [19] log likelihood: -170403.550829
EM: Round [20] log likelihood: -170403.492322
EM: Round [21] log likelihood: -170403.441983
EM: Round [22] log likelihood: -170403.398329
EM: Round [23] log likelihood: -170403.360197
EM: Round [24] log likelihood: -170403.326668
EM: Round [25] log likelihood: -170403.297007
EM: Round [26] log likelihood: -170403.270620
EM: Round [27] log likelihood: -170403.247025
EM: Round [28] log likelihood: -170403.225824
EM: Round [29] log likelihood: -170403.206690
EM: Round [30] log likelihood: -170403.189351
EM: Round [31] log likelihood: -170403.173577
EM: Round [32] log likelihood: -170403.159177
EM: Round [33] log likelihood: -170403.145986
EM: Round [34] log likelihood: -170403.133867
EM: Round [35] log likelihood: -170403.122700
EM: Round [36] log likelihood: -170403.112383
EM: Round [37] log likelihood: -170403.102827
EM: Round [38] log likelihood: -170403.093955
EM: Round [39] log likelihood: -170403.085700
EM: Round [40] log likelihood: -170403.078004
EM: Round [41] log likelihood: -170403.070815
EM: Round [42] log likelihood: -170403.064087
EM: Round [43] log likelihood: -170403.057781
EM: Round [44] log likelihood: -170403.051860
EM: Round [45] log likelihood: -170403.046294
EM: Round [46] log likelihood: -170403.041052
EM: Round [47] log likelihood: -170403.036111
EM: Round [48] log likelihood: -170403.031447
EM: Round [49] log likelihood: -170403.027039
EM: Round [50] log likelihood: -170403.022869
EM: Round [51] log likelihood: -170403.018919
EM: Round [52] log likelihood: -170403.015176
EM: Round [53] log likelihood: -170403.011624
EM: Round [54] log likelihood: -170403.008251
EM: Round [55] log likelihood: -170403.005045
EM: Round [56] log likelihood: -170403.001996
EM: Round [57] log likelihood: -170402.999094
EM: Round [58] log likelihood: -170402.996329
EM: Round [59] log likelihood: -170402.993694
EM: Round [60] log likelihood: -170402.991181
EM: Round [61] log likelihood: -170402.988783
EM: Round [62] log likelihood: -170402.986493
EM: Round [63] log likelihood: -170402.984305
EM: Round [64] log likelihood: -170402.982214
EM: Round [65] log likelihood: -170402.980214
EM: Round [66] log likelihood: -170402.978301
EM: Round [67] log likelihood: -170402.976470
EM: Round [68] log likelihood: -170402.974716
EM: Round [69] log likelihood: -170402.973036
EM: Round [70] log likelihood: -170402.971426
EM: Round [71] log likelihood: -170402.969883
EM: Round [72] log likelihood: -170402.968402
EM: Round [73] log likelihood: -170402.966982
EM: Round [74] log likelihood: -170402.965619
EM: Round [75] log likelihood: -170402.964311
EM: Round [76] log likelihood: -170402.963055
EM: Round [77] log likelihood: -170402.961848
EM: Round [78] log likelihood: -170402.960689
EM: Round [79] log likelihood: -170402.959574
EM: Round [80] log likelihood: -170402.958503
EM: Round [81] log likelihood: -170402.957474
EM: Round [82] log likelihood: -170402.956483
EM: Round [83] log likelihood: -170402.955531
EM: Round [84] log likelihood: -170402.954614
EM: Round [85] log likelihood: -170402.953732
EM: Round [86] log likelihood: -170402.952883
EM: Round [87] log likelihood: -170402.952066
EM: Round [88] log likelihood: -170402.951279
EM: Round [89] log likelihood: -170402.950521
EM: Round [90] log likelihood: -170402.949791
EM: Round [91] log likelihood: -170402.949088
EM: Round [92] log likelihood: -170402.948410
EM: Round [93] log likelihood: -170402.947757
EM: Round [94] log likelihood: -170402.947128
EM: Round [95] log likelihood: -170402.946522
EM: Round [96] log likelihood: -170402.945937
EM: Round [97] log likelihood: -170402.945373
EM: Round [98] log likelihood: -170402.944829
EM: Round [99] log likelihood: -170402.944305
EM: Round [100] log likelihood: -170402.943799
EM: Round [101] log likelihood: -170402.943311
EM: Round [102] log likelihood: -170402.942841
EM: Round [103] log likelihood: -170402.942387
EM: Round [104] log likelihood: -170402.941949
EM: Round [105] log likelihood: -170402.941526
EM: Round [106] log likelihood: -170402.941118
EM: Round [107] log likelihood: -170402.940724
EM: Round [108] log likelihood: -170402.940344
EM: Round [109] log likelihood: -170402.939977
EM: Round [110] log likelihood: -170402.939622
EM: Round [111] log likelihood: -170402.939280
EM: Round [112] log likelihood: -170402.938950
EM: Round [113] log likelihood: -170402.938631
EM: Round [114] log likelihood: -170402.938323
EM: Round [115] log likelihood: -170402.938025
EM: Round [116] log likelihood: -170402.937738
EM: Round [117] log likelihood: -170402.937460
EM: Round [118] log likelihood: -170402.937192
EM: Round [119] log likelihood: -170402.936933
EM: Round [120] log likelihood: -170402.936682
EM: Round [121] log likelihood: -170402.936440
EM: Round [122] log likelihood: -170402.936207
EM: Round [123] log likelihood: -170402.935981
EM: Round [124] log likelihood: -170402.935763
EM: Round [125] log likelihood: -170402.935552
EM: Round [126] log likelihood: -170402.935348
EM: Round [127] log likelihood: -170402.935151
EM: Round [128] log likelihood: -170402.934960
EM: Round [129] log likelihood: -170402.934776
EM: Round [130] log likelihood: -170402.934598
EM: Round [131] log likelihood: -170402.934426
EM: Round [132] log likelihood: -170402.934260
EM: Round [133] log likelihood: -170402.934099
EM: Round [134] log likelihood: -170402.933943
EM: Round [135] log likelihood: -170402.933793
EM: Round [136] log likelihood: -170402.933647
EM: Round [137] log likelihood: -170402.933507
EM: Round [138] log likelihood: -170402.933371
EM: Round [139] log likelihood: -170402.933239
EM: Round [140] log likelihood: -170402.933112
EM: Round [141] log likelihood: -170402.932989
EM: Round [142] log likelihood: -170402.932870
EM: Round [143] log likelihood: -170402.932755
EM: Round [144] log likelihood: -170402.932643
EM: Round [145] log likelihood: -170402.932536
EM: Round [146] log likelihood: -170402.932431
EM: Round [147] log likelihood: -170402.932331
EM: Round [148] log likelihood: -170402.932233
EM: Stopping iterations at round 148 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.OJN3WsxxQr/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.OJN3WsxxQr/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.OJN3WsxxQr/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.OJN3WsxxQr/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.OJN3WsxxQr/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.OJN3WsxxQr/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.OJN3WsxxQr/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20
CMD: cp /tmp/nxf.OJN3WsxxQr/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.OJN3WsxxQr/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.OJN3WsxxQr/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.OJN3WsxxQr/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.OJN3WsxxQr/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.OJN3WsxxQr/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.OJN3WsxxQr/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 161561760 > /tmp/nxf.OJN3WsxxQr/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.OJN3WsxxQr/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.OJN3WsxxQr/ctat_genome_lib_build_dir > /tmp/nxf.OJN3WsxxQr/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.OJN3WsxxQr/ctat_genome_lib_build_dir --annotate /tmp/nxf.OJN3WsxxQr/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.OJN3WsxxQr/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.OJN3WsxxQr/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.OJN3WsxxQr/ctat_genome_lib_build_dir
-done, see /tmp/nxf.OJN3WsxxQr/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.OJN3WsxxQr/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.OJN3WsxxQr/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 1250, filtered: 8391)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.OJN3WsxxQr/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.OJN3WsxxQr/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.OJN3WsxxQr/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000234715.2]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000283994.1]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000172965.17]
WARNING, no entry stored in dbm for [ENSG00000204745.4]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000251026.2]
WARNING, no entry stored in dbm for [ENSG00000227681.5]
WARNING, no entry stored in dbm for [ENSG00000230559.1]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000203413.3]
WARNING, no entry stored in dbm for [ENSG00000235852.1]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000272655.2]
WARNING, no entry stored in dbm for [ENSG00000275716.1]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000226310.1]
WARNING, no entry stored in dbm for [ENSG00000226472.8]
WARNING, no entry stored in dbm for [ENSG00000286708.1]
WARNING, no entry stored in dbm for [ENSG00000272578.5]
WARNING, no entry stored in dbm for [ENSG00000226049.3]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000233071.3]
WARNING, no entry stored in dbm for [ENSG00000183298.5]
WARNING, no entry stored in dbm for [ENSG00000239556.4]
WARNING, no entry stored in dbm for [ENSG00000174384.9]
WARNING, no entry stored in dbm for [ENSG00000286830.1]
WARNING, no entry stored in dbm for [ENSG00000253557.6]
WARNING, no entry stored in dbm for [ENSG00000256597.3]
WARNING, no entry stored in dbm for [ENSG00000282508.2]
WARNING, no entry stored in dbm for [ENSG00000248568.1]
WARNING, no entry stored in dbm for [ENSG00000279066.1]
WARNING, no entry stored in dbm for [ENSG00000248550.4]
WARNING, no entry stored in dbm for [ENSG00000180211.5]
WARNING, no entry stored in dbm for [ENSG00000226407.1]
WARNING, no entry stored in dbm for [ENSG00000245869.2]
WARNING, no entry stored in dbm for [ENSG00000259977.1]
WARNING, no entry stored in dbm for [ENSG00000260236.1]
WARNING, no entry stored in dbm for [ENSG00000231359.3]
WARNING, no entry stored in dbm for [ENSG00000213942.3]
WARNING, no entry stored in dbm for [ENSG00000232386.9]
WARNING, no entry stored in dbm for [ENSG00000257453.1]
WARNING, no entry stored in dbm for [ENSG00000237004.4]
WARNING, no entry stored in dbm for [ENSG00000266179.2]
WARNING, no entry stored in dbm for [ENSG00000280383.1]
WARNING, no entry stored in dbm for [ENSG00000279217.1]
WARNING, no entry stored in dbm for [ENSG00000279217.1]
WARNING, no entry stored in dbm for [ENSG00000213866.3]
WARNING, no entry stored in dbm for [ENSG00000270799.1]
WARNING, no entry stored in dbm for [ENSG00000282458.1]
WARNING, no entry stored in dbm for [ENSG00000274536.7]
WARNING, no entry stored in dbm for [ENSG00000259248.7]
WARNING, no entry stored in dbm for [ENSG00000242435.1]
WARNING, no entry stored in dbm for [ENSG00000078319.10]
WARNING, no entry stored in dbm for [ENSG00000241057.2]
WARNING, no entry stored in dbm for [ENSG00000223732.2]
WARNING, no entry stored in dbm for [ENSG00000273272.2]
WARNING, no entry stored in dbm for [ENSG00000230773.9]
WARNING, no entry stored in dbm for [ENSG00000253793.1]
WARNING, no entry stored in dbm for [ENSG00000186493.14]
WARNING, no entry stored in dbm for [ENSG00000287554.1]
WARNING, no entry stored in dbm for [ENSG00000286689.1]
WARNING, no entry stored in dbm for [ENSG00000128438.10]
WARNING, no entry stored in dbm for [ENSG00000251417.2]
WARNING, no entry stored in dbm for [ENSG00000284977.2]
WARNING, no entry stored in dbm for [ENSG00000226696.6]
WARNING, no entry stored in dbm for [ENSG00000288543.1]
WARNING, no entry stored in dbm for [ENSG00000245293.3]
WARNING, no entry stored in dbm for [ENSG00000234106.3]
WARNING, no entry stored in dbm for [ENSG00000234898.1]
WARNING, no entry stored in dbm for [ENSG00000268120.1]
WARNING, no entry stored in dbm for [ENSG00000240350.3]
WARNING, no entry stored in dbm for [ENSG00000175061.18]
WARNING, no entry stored in dbm for [ENSG00000268364.2]
WARNING, no entry stored in dbm for [ENSG00000225689.2]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000253204.1]
WARNING, no entry stored in dbm for [ENSG00000271500.1]
WARNING, no entry stored in dbm for [ENSG00000227681.5]
WARNING, no entry stored in dbm for [ENSG00000100058.12]
WARNING, no entry stored in dbm for [ENSG00000251441.3]
WARNING, no entry stored in dbm for [ENSG00000225482.1]
WARNING, no entry stored in dbm for [ENSG00000212829.8]
WARNING, no entry stored in dbm for [ENSG00000253154.2]
WARNING, no entry stored in dbm for [ENSG00000285612.1]
WARNING, no entry stored in dbm for [ENSG00000243742.5]
WARNING, no entry stored in dbm for [ENSG00000228000.1]
WARNING, no entry stored in dbm for [ENSG00000228000.1]
WARNING, no entry stored in dbm for [ENSG00000229235.1]
WARNING, no entry stored in dbm for [ENSG00000213935.3]
WARNING, no entry stored in dbm for [ENSG00000213653.4]
WARNING, no entry stored in dbm for [ENSG00000274525.1]
WARNING, no entry stored in dbm for [ENSG00000270722.1]
WARNING, no entry stored in dbm for [ENSG00000207334.1]
WARNING, no entry stored in dbm for [ENSG00000241529.3]
WARNING, no entry stored in dbm for [ENSG00000276047.1]
WARNING, no entry stored in dbm for [ENSG00000240869.3]
WARNING, no entry stored in dbm for [ENSG00000239899.3]
WARNING, no entry stored in dbm for [ENSG00000239703.3]
WARNING, no entry stored in dbm for [ENSG00000240869.3]
WARNING, no entry stored in dbm for [ENSG00000200312.1]
WARNING, no entry stored in dbm for [ENSG00000200488.1]
WARNING, no entry stored in dbm for [ENSG00000234498.3]
WARNING, no entry stored in dbm for [ENSG00000230556.1]
WARNING, no entry stored in dbm for [ENSG00000229255.1]
WARNING, no entry stored in dbm for [ENSG00000198526.7]
WARNING, no entry stored in dbm for [ENSG00000228016.1]
WARNING, no entry stored in dbm for [ENSG00000203865.11]
WARNING, no entry stored in dbm for [ENSG00000248671.8]
WARNING, no entry stored in dbm for [ENSG00000249859.12]
WARNING, no entry stored in dbm for [ENSG00000196796.5]
WARNING, no entry stored in dbm for [ENSG00000231503.4]
WARNING, no entry stored in dbm for [ENSG00000133624.13]
WARNING, no entry stored in dbm for [ENSG00000180259.10]
WARNING, no entry stored in dbm for [ENSG00000279036.1]
WARNING, no entry stored in dbm for [ENSG00000246022.3]
WARNING, no entry stored in dbm for [ENSG00000287369.1]
WARNING, no entry stored in dbm for [ENSG00000228358.6]
WARNING, no entry stored in dbm for [ENSG00000197744.5]
WARNING, no entry stored in dbm for [ENSG00000259157.1]
WARNING, no entry stored in dbm for [ENSG00000230305.2]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
WARNING, no entry stored in dbm for [ENSG00000224477.5]
WARNING, no entry stored in dbm for [ENSG00000280109.3]
WARNING, no entry stored in dbm for [ENSG00000231881.2]
WARNING, no entry stored in dbm for [ENSG00000224817.2]
WARNING, no entry stored in dbm for [ENSG00000234191.1]
WARNING, no entry stored in dbm for [ENSG00000226232.8]
WARNING, no entry stored in dbm for [ENSG00000257634.1]
WARNING, no entry stored in dbm for [ENSG00000281880.2]
WARNING, no entry stored in dbm for [ENSG00000246211.2]
WARNING, no entry stored in dbm for [ENSG00000233997.5]
WARNING, no entry stored in dbm for [ENSG00000255500.2]
WARNING, no entry stored in dbm for [ENSG00000223705.9]
WARNING, no entry stored in dbm for [ENSG00000242808.10]
WARNING, no entry stored in dbm for [ENSG00000244380.1]
WARNING, no entry stored in dbm for [ENSG00000212978.6]
WARNING, no entry stored in dbm for [ENSG00000245532.9]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000224927.2]
WARNING, no entry stored in dbm for [ENSG00000232732.11]
WARNING, no entry stored in dbm for [ENSG00000199843.1]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000180525.13]
WARNING, no entry stored in dbm for [ENSG00000261613.2]
WARNING, no entry stored in dbm for [ENSG00000255486.1]
WARNING, no entry stored in dbm for [ENSG00000254278.1]
WARNING, no entry stored in dbm for [ENSG00000253519.1]
WARNING, no entry stored in dbm for [ENSG00000270127.2]
WARNING, no entry stored in dbm for [ENSG00000267686.2]
WARNING, no entry stored in dbm for [ENSG00000172965.17]
WARNING, no entry stored in dbm for [ENSG00000204745.4]
WARNING, no entry stored in dbm for [ENSG00000229989.4]
WARNING, no entry stored in dbm for [ENSG00000225746.13]
WARNING, no entry stored in dbm for [ENSG00000198358.4]
WARNING, no entry stored in dbm for [ENSG00000287222.1]
WARNING, no entry stored in dbm for [ENSG00000272221.1]
WARNING, no entry stored in dbm for [ENSG00000242960.1]
WARNING, no entry stored in dbm for [ENSG00000261722.1]
WARNING, no entry stored in dbm for [ENSG00000242529.1]
WARNING, no entry stored in dbm for [ENSG00000263612.1]
WARNING, no entry stored in dbm for [ENSG00000283196.2]
WARNING, no entry stored in dbm for [ENSG00000269907.1]
WARNING, no entry stored in dbm for [ENSG00000232527.8]
WARNING, no entry stored in dbm for [ENSG00000272779.1]
WARNING, no entry stored in dbm for [ENSG00000251432.7]
WARNING, no entry stored in dbm for [ENSG00000263609.2]
WARNING, no entry stored in dbm for [ENSG00000234183.1]
WARNING, no entry stored in dbm for [ENSG00000224655.7]
WARNING, no entry stored in dbm for [ENSG00000267201.1]
WARNING, no entry stored in dbm for [ENSG00000226983.3]
WARNING, no entry stored in dbm for [ENSG00000186960.12]
WARNING, no entry stored in dbm for [ENSG00000264301.1]
WARNING, no entry stored in dbm for [ENSG00000203999.9]
WARNING, no entry stored in dbm for [ENSG00000255050.1]
WARNING, no entry stored in dbm for [ENSG00000281404.2]
WARNING, no entry stored in dbm for [ENSG00000281912.1]
WARNING, no entry stored in dbm for [ENSG00000226067.7]
WARNING, no entry stored in dbm for [ENSG00000215483.11]
WARNING, no entry stored in dbm for [ENSG00000236790.6]
WARNING, no entry stored in dbm for [ENSG00000276758.1]
WARNING, no entry stored in dbm for [ENSG00000283132.1]
WARNING, no entry stored in dbm for [ENSG00000238013.1]
WARNING, no entry stored in dbm for [ENSG00000231203.1]
WARNING, no entry stored in dbm for [ENSG00000229320.3]
WARNING, no entry stored in dbm for [ENSG00000264853.1]
WARNING, no entry stored in dbm for [ENSG00000204188.7]
WARNING, no entry stored in dbm for [ENSG00000250980.1]
WARNING, no entry stored in dbm for [ENSG00000197332.9]
WARNING, no entry stored in dbm for [ENSG00000231607.13]
WARNING, no entry stored in dbm for [ENSG00000227653.1]
WARNING, no entry stored in dbm for [ENSG00000236679.2]
WARNING, no entry stored in dbm for [ENSG00000263266.2]
WARNING, no entry stored in dbm for [ENSG00000285219.2]
WARNING, no entry stored in dbm for [ENSG00000285219.2]
WARNING, no entry stored in dbm for [ENSG00000230869.1]
WARNING, no entry stored in dbm for [ENSG00000234062.8]
WARNING, no entry stored in dbm for [ENSG00000227392.2]
WARNING, no entry stored in dbm for [ENSG00000251557.2]
WARNING, no entry stored in dbm for [ENSG00000132967.9]
WARNING, no entry stored in dbm for [ENSG00000132967.9]
WARNING, no entry stored in dbm for [ENSG00000227543.5]
WARNING, no entry stored in dbm for [ENSG00000214832.5]
WARNING, no entry stored in dbm for [ENSG00000275585.2]
WARNING, no entry stored in dbm for [ENSG00000259496.2]
WARNING, no entry stored in dbm for [ENSG00000223383.1]
WARNING, no entry stored in dbm for [ENSG00000260827.1]
WARNING, no entry stored in dbm for [ENSG00000251451.1]
WARNING, no entry stored in dbm for [ENSG00000230189.7]
WARNING, no entry stored in dbm for [ENSG00000286474.1]
WARNING, no entry stored in dbm for [ENSG00000244705.1]
WARNING, no entry stored in dbm for [ENSG00000204241.8]
WARNING, no entry stored in dbm for [ENSG00000214433.4]
WARNING, no entry stored in dbm for [ENSG00000172297.7]
WARNING, no entry stored in dbm for [ENSG00000267741.1]
WARNING, no entry stored in dbm for [ENSG00000224837.1]
WARNING, no entry stored in dbm for [ENSG00000288663.1]
WARNING, no entry stored in dbm for [ENSG00000266691.1]
WARNING, no entry stored in dbm for [ENSG00000282826.2]
WARNING, no entry stored in dbm for [ENSG00000231756.1]
WARNING, no entry stored in dbm for [ENSG00000256987.1]
WARNING, no entry stored in dbm for [ENSG00000274347.1]
WARNING, no entry stored in dbm for [ENSG00000204677.13]
WARNING, no entry stored in dbm for [ENSG00000213269.2]
WARNING, no entry stored in dbm for [ENSG00000249673.7]
WARNING, no entry stored in dbm for [ENSG00000251621.1]
WARNING, no entry stored in dbm for [ENSG00000199395.1]
WARNING, no entry stored in dbm for [ENSG00000223019.1]
WARNING, no entry stored in dbm for [ENSG00000200275.1]
WARNING, no entry stored in dbm for [ENSG00000233300.1]
WARNING, no entry stored in dbm for [ENSG00000173209.23]
WARNING, no entry stored in dbm for [ENSG00000229358.3]
WARNING, no entry stored in dbm for [ENSG00000264243.1]
WARNING, no entry stored in dbm for [ENSG00000267943.1]
WARNING, no entry stored in dbm for [ENSG00000185904.12]
WARNING, no entry stored in dbm for [ENSG00000256508.2]
WARNING, no entry stored in dbm for [ENSG00000229358.3]
WARNING, no entry stored in dbm for [ENSG00000267586.7]
WARNING, no entry stored in dbm for [ENSG00000228878.8]
WARNING, no entry stored in dbm for [ENSG00000261184.3]
WARNING, no entry stored in dbm for [ENSG00000225855.7]
WARNING, no entry stored in dbm for [ENSG00000249306.6]
WARNING, no entry stored in dbm for [ENSG00000259974.3]
WARNING, no entry stored in dbm for [ENSG00000264538.6]
WARNING, no entry stored in dbm for [ENSG00000280418.1]
WARNING, no entry stored in dbm for [ENSG00000227617.9]
WARNING, no entry stored in dbm for [ENSG00000205534.6]
WARNING, no entry stored in dbm for [ENSG00000249577.1]
WARNING, no entry stored in dbm for [ENSG00000276768.1]
WARNING, no entry stored in dbm for [ENSG00000223552.1]
WARNING, no entry stored in dbm for [ENSG00000239880.1]
WARNING, no entry stored in dbm for [ENSG00000196796.5]
WARNING, no entry stored in dbm for [ENSG00000233098.9]
WARNING, no entry stored in dbm for [ENSG00000220635.2]
WARNING, no entry stored in dbm for [ENSG00000249395.4]
WARNING, no entry stored in dbm for [ENSG00000254815.6]
WARNING, no entry stored in dbm for [ENSG00000185710.9]
WARNING, no entry stored in dbm for [ENSG00000252833.1]
WARNING, no entry stored in dbm for [ENSG00000287736.1]
WARNING, no entry stored in dbm for [ENSG00000203799.13]
WARNING, no entry stored in dbm for [ENSG00000266918.1]
WARNING, no entry stored in dbm for [ENSG00000223806.8]
WARNING, no entry stored in dbm for [ENSG00000196167.10]
WARNING, no entry stored in dbm for [ENSG00000284639.1]
WARNING, no entry stored in dbm for [ENSG00000249188.1]
WARNING, no entry stored in dbm for [ENSG00000256591.5]
WARNING, no entry stored in dbm for [ENSG00000250230.3]
WARNING, no entry stored in dbm for [ENSG00000255539.1]
WARNING, no entry stored in dbm for [ENSG00000230006.7]
WARNING, no entry stored in dbm for [ENSG00000230006.7]
WARNING, no entry stored in dbm for [ENSG00000237636.3]
WARNING, no entry stored in dbm for [ENSG00000217165.1]
WARNING, no entry stored in dbm for [ENSG00000217165.1]
WARNING, no entry stored in dbm for [ENSG00000228980.4]
WARNING, no entry stored in dbm for [ENSG00000230021.10]
WARNING, no entry stored in dbm for [ENSG00000251229.1]
WARNING, no entry stored in dbm for [ENSG00000225096.3]
WARNING, no entry stored in dbm for [ENSG00000259994.1]
WARNING, no entry stored in dbm for [ENSG00000286842.1]
WARNING, no entry stored in dbm for [ENSG00000262412.1]
WARNING, no entry stored in dbm for [ENSG00000230490.3]
WARNING, no entry stored in dbm for [ENSG00000176320.2]
WARNING, no entry stored in dbm for [ENSG00000226798.1]
WARNING, no entry stored in dbm for [ENSG00000220537.1]
WARNING, no entry stored in dbm for [ENSG00000270209.1]
WARNING, no entry stored in dbm for [ENSG00000287983.1]
WARNING, no entry stored in dbm for [ENSG00000286223.1]
WARNING, no entry stored in dbm for [ENSG00000218749.1]
WARNING, no entry stored in dbm for [ENSG00000230912.1]
WARNING, no entry stored in dbm for [ENSG00000215022.7]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000230869.1]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000181984.11]
WARNING, no entry stored in dbm for [ENSG00000286694.1]
WARNING, no entry stored in dbm for [ENSG00000276077.4]
WARNING, no entry stored in dbm for [ENSG00000282572.2]
WARNING, no entry stored in dbm for [ENSG00000218052.5]
WARNING, no entry stored in dbm for [ENSG00000225603.3]
WARNING, no entry stored in dbm for [ENSG00000283453.2]
WARNING, no entry stored in dbm for [ENSG00000234981.1]
WARNING, no entry stored in dbm for [ENSG00000226448.1]
WARNING, no entry stored in dbm for [ENSG00000223612.3]
WARNING, no entry stored in dbm for [ENSG00000278182.1]
WARNING, no entry stored in dbm for [ENSG00000256546.2]
WARNING, no entry stored in dbm for [ENSG00000283662.1]
WARNING, no entry stored in dbm for [ENSG00000215158.9]
WARNING, no entry stored in dbm for [ENSG00000226268.3]
WARNING, no entry stored in dbm for [ENSG00000214135.8]
WARNING, no entry stored in dbm for [ENSG00000286004.1]
WARNING, no entry stored in dbm for [ENSG00000259704.2]
WARNING, no entry stored in dbm for [ENSG00000257653.1]
WARNING, no entry stored in dbm for [ENSG00000284675.1]
WARNING, no entry stored in dbm for [ENSG00000249244.1]
WARNING, no entry stored in dbm for [ENSG00000287449.1]
WARNING, no entry stored in dbm for [ENSG00000262869.1]
WARNING, no entry stored in dbm for [ENSG00000284648.1]
WARNING, no entry stored in dbm for [ENSG00000256625.1]
WARNING, no entry stored in dbm for [ENSG00000284428.1]
WARNING, no entry stored in dbm for [ENSG00000264151.6]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000276805.2]
WARNING, no entry stored in dbm for [ENSG00000261392.1]
WARNING, no entry stored in dbm for [ENSG00000254554.1]
WARNING, no entry stored in dbm for [ENSG00000236513.1]
WARNING, no entry stored in dbm for [ENSG00000239985.2]
WARNING, no entry stored in dbm for [ENSG00000181126.13]
WARNING, no entry stored in dbm for [ENSG00000234638.1]
WARNING, no entry stored in dbm for [ENSG00000250274.2]
WARNING, no entry stored in dbm for [ENSG00000267092.2]
WARNING, no entry stored in dbm for [ENSG00000267040.6]
WARNING, no entry stored in dbm for [ENSG00000248223.1]
WARNING, no entry stored in dbm for [ENSG00000287677.2]
WARNING, no entry stored in dbm for [ENSG00000248898.3]
WARNING, no entry stored in dbm for [ENSG00000287125.1]
WARNING, no entry stored in dbm for [ENSG00000233223.3]
WARNING, no entry stored in dbm for [ENSG00000261329.6]
WARNING, no entry stored in dbm for [ENSG00000249577.1]
WARNING, no entry stored in dbm for [ENSG00000238045.9]
WARNING, no entry stored in dbm for [ENSG00000283535.1]
WARNING, no entry stored in dbm for [ENSG00000248777.1]
WARNING, no entry stored in dbm for [ENSG00000268460.2]
WARNING, no entry stored in dbm for [ENSG00000267549.6]
WARNING, no entry stored in dbm for [ENSG00000267623.3]
WARNING, no entry stored in dbm for [ENSG00000230882.1]
WARNING, no entry stored in dbm for [ENSG00000230305.2]
WARNING, no entry stored in dbm for [ENSG00000239556.4]
WARNING, no entry stored in dbm for [ENSG00000214243.3]
WARNING, no entry stored in dbm for [ENSG00000205485.13]
WARNING, no entry stored in dbm for [ENSG00000228113.7]
WARNING, no entry stored in dbm for [ENSG00000278727.1]
WARNING, no entry stored in dbm for [ENSG00000225793.3]
* STAR-Fusion complete. See output: /tmp/nxf.OJN3WsxxQr/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)