Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8e/30014ac25a1627ae83a05bcd37fa3f/659_dfA-T1-TRNA-1_B23MHV2LT4_1.fusionreport.tsv
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/73/8ab080006dea5f475e030696fc9ff2/.command.sh
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/bd/e35f8ce7eb8c5d22f4b7b21b96c7ae/659_dfA-T1-TRNA-1_B23MHV2LT4_1_1.fastp.fastq.gz
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/73/8ab080006dea5f475e030696fc9ff2/.command.run
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/bd/e35f8ce7eb8c5d22f4b7b21b96c7ae/659_dfA-T1-TRNA-1_B23MHV2LT4_1_2.fastp.fastq.gz
==> STAGING COMPLETE (6 inputs)
Running: /usr/local/src/STAR-Fusion/FusionInspector/util/fusion_pair_to_mini_genome_join.pl --fusions 659_dfA-T1-TRNA-1_B23MHV2LT4_1.fusionreport.tsv --gtf /tmp/nxf.97TVOzPwtG/ctat_genome_lib_build_dir/ref_annot.gtf --genome_fa /tmp/nxf.97TVOzPwtG/ctat_genome_lib_build_dir/ref_genome.fa --out_prefix /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1 --shrink_introns --max_intron_length 1000
Done.
Execution Time = 0.15 minutes. CMD: /usr/local/src/STAR-Fusion/FusionInspector/util/fusion_pair_to_mini_genome_join.pl --fusions 659_dfA-T1-TRNA-1_B23MHV2LT4_1.fusionreport.tsv --gtf /tmp/nxf.97TVOzPwtG/ctat_genome_lib_build_dir/ref_annot.gtf --genome_fa /tmp/nxf.97TVOzPwtG/ctat_genome_lib_build_dir/ref_genome.fa --out_prefix /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1 --shrink_introns --max_intron_length 1000
Running: touch /tmp/nxf.97TVOzPwtG/chckpts_dir/fusion_contigs.ok
Running: cp /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.fa /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.fa
Execution Time = 0.00 minutes. CMD: cp /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.fa /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.fa
Running: touch /tmp/nxf.97TVOzPwtG/chckpts_dir/cp_contigs_file_workdir
Running: cp /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.gtf /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.gtf
Execution Time = 0.00 minutes. CMD: cp /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.gtf /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.gtf
Running: touch /tmp/nxf.97TVOzPwtG/chckpts_dir/cp_gtf_file_workdir.ok
Running: /usr/local/src/STAR-Fusion/FusionInspector/util/fasta_and_gtf_to_cytoband.pl /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.fa /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.gtf > /tmp/nxf.97TVOzPwtG/cytoBand.txt
Execution Time = 0.00 minutes. CMD: /usr/local/src/STAR-Fusion/FusionInspector/util/fasta_and_gtf_to_cytoband.pl /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.fa /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.gtf > /tmp/nxf.97TVOzPwtG/cytoBand.txt
Running: touch /tmp/nxf.97TVOzPwtG/chckpts_dir/cytoband.ok
Running: /usr/local/src/STAR-Fusion/FusionInspector/util/gtf_gene_to_bed.pl /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.gtf > /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.bed
-parsing GTF file: /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.gtf
Execution Time = 0.01 minutes. CMD: /usr/local/src/STAR-Fusion/FusionInspector/util/gtf_gene_to_bed.pl /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.gtf > /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.bed
Running: touch /tmp/nxf.97TVOzPwtG/chckpts_dir/merged_contig_gtf_to_bed.ok
Running: sort -k1,1 -k2,2n /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.bed > /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.bed.sorted.bed
Execution Time = 0.00 minutes. CMD: sort -k1,1 -k2,2n /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.bed > /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.bed.sorted.bed
Running: touch /tmp/nxf.97TVOzPwtG/chckpts_dir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.bed.bedsort.ok
Running: bgzip -f /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.bed.sorted.bed
Execution Time = 0.00 minutes. CMD: bgzip -f /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.bed.sorted.bed
Running: touch /tmp/nxf.97TVOzPwtG/chckpts_dir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.bed.bgzip.ok
Running: tabix -p bed /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.bed.sorted.bed.gz
Execution Time = 0.00 minutes. CMD: tabix -p bed /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.bed.sorted.bed.gz
Running: touch /tmp/nxf.97TVOzPwtG/chckpts_dir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.bed.tabix.ok
Running: samtools faidx /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.fa
Execution Time = 0.00 minutes. CMD: samtools faidx /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.fa
Running: touch /tmp/nxf.97TVOzPwtG/chckpts_dir/merged_contig_fai.ok
Running: /usr/local/src/STAR-Fusion/FusionInspector/util/run_FI_STAR.pl --genome /tmp/nxf.97TVOzPwtG/ctat_genome_lib_build_dir/ref_genome.fa --patch /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.fa --max_mate_dist 100000 -G /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.gtf --CPU 8 --out_prefix 659_dfA-T1-TRNA-1_B23MHV2LT4_1.star --out_dir /tmp/nxf.97TVOzPwtG/fi_workdir --reads "/tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1_1.fastp.fastq.gz /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1_2.fastp.fastq.gz"
* Running CMD: /usr/local/bin/STAR --runThreadN 8 --genomeDir /tmp/nxf.97TVOzPwtG/ctat_genome_lib_build_dir/ref_genome.fa.star.idx --outSAMtype BAM SortedByCoordinate --twopassMode None --alignSJDBoverhangMin 10 --genomeSuffixLengthMax 10000 --limitBAMsortRAM 47271261705 --alignInsertionFlush Right --alignMatesGapMax 100000 --alignIntronMax 100000 --outSAMattributes All --readFilesIn /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1_1.fastp.fastq.gz /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1_2.fastp.fastq.gz --genomeFastaFiles /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.fa --outSAMfilter KeepAllAddedReferences --sjdbGTFfile /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.gtf --alignSJstitchMismatchNmax 5 -1 5 5 --scoreGapNoncan -6 --readFilesCommand 'gunzip -c'
Jun 08 10:34:24 ..... started STAR run
Jun 08 10:34:24 ..... loading genome
Jun 08 10:36:14 ... generating Suffix Array index
Jun 08 10:40:07 ... completed Suffix Array index
Jun 08 10:40:08 ..... processing annotations GTF
Jun 08 10:40:08 ..... inserting junctions into the genome indices
Jun 08 10:41:10 ..... started mapping
Jun 08 11:56:25 ..... finished mapping
Jun 08 11:56:27 ..... started sorting BAM
Jun 08 11:56:32 ..... finished successfully
* Running CMD: mv Aligned.sortedByCoord.out.bam 659_dfA-T1-TRNA-1_B23MHV2LT4_1.star.sortedByCoord.out.bam
* Running CMD: samtools index 659_dfA-T1-TRNA-1_B23MHV2LT4_1.star.sortedByCoord.out.bam
Execution Time = 82.28 minutes. CMD: /usr/local/src/STAR-Fusion/FusionInspector/util/run_FI_STAR.pl --genome /tmp/nxf.97TVOzPwtG/ctat_genome_lib_build_dir/ref_genome.fa --patch /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.fa --max_mate_dist 100000 -G /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.gtf --CPU 8 --out_prefix 659_dfA-T1-TRNA-1_B23MHV2LT4_1.star --out_dir /tmp/nxf.97TVOzPwtG/fi_workdir --reads "/tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1_1.fastp.fastq.gz /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1_2.fastp.fastq.gz"
Running: touch /tmp/nxf.97TVOzPwtG/chckpts_dir/run_STAR.ok
Running: /usr/local/src/STAR-Fusion/FusionInspector/util/bam_mark_duplicates.py -i /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.star.sortedByCoord.out.bam -o /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.star.cSorted.dupsMarked.bam --remove_dups
11:57:30 : INFO : Done.
Execution Time = 0.82 minutes. CMD: /usr/local/src/STAR-Fusion/FusionInspector/util/bam_mark_duplicates.py -i /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.star.sortedByCoord.out.bam -o /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.star.cSorted.dupsMarked.bam --remove_dups
Running: touch /tmp/nxf.97TVOzPwtG/chckpts_dir/mark_dup_reads.ok
Running: samtools index /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.star.cSorted.dupsMarked.bam
Execution Time = 0.10 minutes. CMD: samtools index /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.star.cSorted.dupsMarked.bam
Running: touch /tmp/nxf.97TVOzPwtG/chckpts_dir/mark_dups_reads.index.ok
Running: /usr/local/src/STAR-Fusion/FusionInspector/util/get_fusion_JUNCTION_reads_from_fusion_contig_bam.pl --gtf_file /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.gtf --MIN_ALIGN_PER_ID 96 --bam /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.star.cSorted.dupsMarked.bam --genome_lib_dir ctat_genome_lib_build_dir > /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.star.cSorted.dupsMarked.bam.fusion_junc_reads.sam
-parsing GTF file: /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.gtf
-parsing /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.star.cSorted.dupsMarked.bam
[10000]
[20000]
[30000]
[40000]
[50000]
[60000]
[70000]
[80000]
[90000]
[100000]
[110000]
[120000]
[130000]
[140000]
[150000]
[160000]
[170000]
[180000]
[190000]
[200000]
[210000]
[220000]
[230000]
[240000]
[250000]
[260000]
[270000]
[280000]
[290000]
[300000]
[310000]
[320000]
[330000]
[340000]
[350000]
[360000]
[370000]
[380000]
[390000]
[400000]
[410000]
[420000]
[430000]
[440000]
[450000]
[460000]
[470000]
[480000]
[490000]
[500000]
[510000]
[520000]
[530000]
[540000]
[550000]
[560000]
[570000]
[580000]
[590000]
[600000]
[610000]
[620000]
[630000]
[640000]
[650000]
[660000]
[670000]
[680000]
[690000]
[700000]
[710000]
[720000]
[730000]
[740000]
[750000]
[760000]
[770000]
[780000]
[790000]
[800000]
[810000]
[820000]
[830000]
[840000]
[850000]
[860000]
[870000]
[880000]
[890000]
[900000]
[910000]
[920000]
[930000]
[940000]
[950000]
[960000]
[970000]
[980000]
[990000]
[1000000]
[1010000]
[1020000]
[1030000]
[1040000]
[1050000]
[1060000]
[1070000]
[1080000]
[1090000]
[1100000]
[1110000]
[1120000]
[1130000]
[1140000]
[1150000]
[1160000]
[1170000]
[1180000]
[1190000]
[1200000]
[1210000]
[1220000]
[1230000]
[1240000]
[1250000]
[1260000]
[1270000]
[1280000]
[1290000]
[1300000]
[1310000]
[1320000]
[1330000]
[1340000]
[1350000]
[1360000]
[1370000]
[1380000]
[1390000]
[1400000]
[1410000]
[1420000]
[1430000]
[1440000]
[1450000]
[1460000]
[1470000]
[1480000]
[1490000]
[1500000]
[1510000]
[1520000]
[1530000]
[1540000]
[1550000]
[1560000]
[1570000]
[1580000]
[1590000]
[1600000]
[1610000]
[1620000]
[1630000]
[1640000]
[1650000]
[1660000]
[1670000]
[1680000]
[1690000]
[1700000]
[1710000]
[1720000]
[1730000]
[1740000]
[1750000]
[1760000]
[1770000]
[1780000]
[1790000]
[1800000]
[1810000]
[1820000]
[1830000]
[1840000]
[1850000]
[1860000]
[1870000]
[1880000]
[1890000]
[1900000]
[1910000]
[1920000]
[1930000]
[1940000]
[1950000]
[1960000]
[1970000]
[1980000]
[1990000]
[2000000]
[2010000]
[2020000]
[2030000]
[2040000]
[2050000]
[2060000]
[2070000]
[2080000]
[2090000]
[2100000]
[2110000]
[2120000]
[2130000]
[2140000]
[2150000]
[2160000]
[2170000]
[2180000]
[2190000]
[2200000]
[2210000]
[2220000]
[2230000]
[2240000]
[2250000]
[2260000]
[2270000]
[2280000]
[2290000]
[2300000]
[2310000]
[2320000]
[2330000]
[2340000]
[2350000]
[2360000]
[2370000]
[2380000]
[2390000]
[2400000]
[2410000]
[2420000]
[2430000]
[2440000]
[2450000]
[2460000]
[2470000]
[2480000]
[2490000]
[2500000]
[2510000]
[2520000]
[2530000]
[2540000]
[2550000]
[2560000]
[2570000]
[2580000]
[2590000]
[2600000]
[2610000]
[2620000]
[2630000]
[2640000]
[2650000]
[2660000]
[2670000]
[2680000]
[2690000]
[2700000]
[2710000]
[2720000]
[2730000]
[2740000]
[2750000]
[2760000]
[2770000]
[2780000]
[2790000]
[2800000]
[2810000]
[2820000]
[2830000]
[2840000]
[2850000]
[2860000]
[2870000]
[2880000]
[2890000]
[2900000]
[2910000]
[2920000]
[2930000]
[2940000]
[2950000]
[2960000]
[2970000]
[2980000]
[2990000]
[3000000]
[3010000]
[3020000]
[3030000]
[3040000]
[3050000]
[3060000]
[3070000]
[3080000]
[3090000]
[3100000]
[3110000]
[3120000]
[3130000]
[3140000]
[3150000]
[3160000]
[3170000]
[3180000]
[3190000]
[3200000]
[3210000]
[3220000]
[3230000]
[3240000]
[3250000]
[3260000]
[3270000]
[3280000]
[3290000]
[3300000]
[3310000]
[3320000]
[3330000]
[3340000]
[3350000]
[3360000]
[3370000]
[3380000]
[3390000]
[3400000]
[3410000]
[3420000]
[3430000]
[3440000]
[3450000]
[3460000]
[3470000]
[3480000]
[3490000]
[3500000]
[3510000]
[3520000]
[3530000]
[3540000]
[3550000]
[3560000]
[3570000]
[3580000]
[3590000]
[3600000]
[3610000]
[3620000]
[3630000]
[3640000]
[3650000]
[3660000]
[3670000]
[3680000]
[3690000]
[3700000]
[3710000]
[3720000]
[3730000]
[3740000]
[3750000]
[3760000]
[3770000]
[3780000]
[3790000]
[3800000]
[3810000]
[3820000]
[3830000]
[3840000]
[3850000]
[3860000]
[3870000]
[3880000]
[3890000]
[3900000]
[3910000]
[3920000]
[3930000]
[3940000]
[3950000]
[3960000]
[3970000]
[3980000]
[3990000]
[4000000]
[4010000]
[4020000]
[4030000]
[4040000]
[4050000]
[4060000]
[4070000]
[4080000]
[4090000]
[4100000]
[4110000]
[4120000]
[4130000]
[4140000]
[4150000]
[4160000]
[4170000]
[4180000]
[4190000]
[4200000]
[4210000]
[4220000]
[4230000]
[4240000]
[4250000]
[4260000]
[4270000]
[4280000]
[4290000]
[4300000]
[4310000]
[4320000]
[4330000]
[4340000]
[4350000]
[4360000]
[4370000]
[4380000]
[4390000]
[4400000]
[4410000]
[4420000]
[4430000]
[4440000]
[4450000]
[4460000]
[4470000]
[4480000]
[4490000]
[4500000]
[4510000]
[4520000]
[4530000]
[4540000]
[4550000]
[4560000]
[4570000]
[4580000]
[4590000]
[4600000]
[4610000]
[4620000]
[4630000]
[4640000]
[4650000]
[4660000]
[4670000]
[4680000]
[4690000]
[4700000]
[4710000]
[4720000]
[4730000]
[4740000]
[4750000]
[4760000]
[4770000]
[4780000]
[4790000]
[4800000]
[4810000]
[4820000]
[4830000]
[4840000]
[4850000]
[4860000]
[4870000]
[4880000]
[4890000]
[4900000]
[4910000]
[4920000]
[4930000]
[4940000]
[4950000]
[4960000]
[4970000]
[4980000]
[4990000]
[5000000]
[5010000]
[5020000]
[5030000]
[5040000]
[5050000]
[5060000]
[5070000]
[5080000]
[5090000]
[5100000]
[5110000]
[5120000]
[5130000]
[5140000]
[5150000]
[5160000]
[5170000]
[5180000]
[5190000]
[5200000]
[5210000]
[5220000]
[5230000]
[5240000]
[5250000]
[5260000]
[5270000]
[5280000]
[5290000]
[5300000]
[5310000]
[5320000]
[5330000]
[5340000]
[5350000]
[5360000]
[5370000]
[5380000]
[5390000]
[5400000]
[5410000]
[5420000]
[5430000]
[5440000]
[5450000]
[5460000]
[5470000]
[5480000]
[5490000]
[5500000]
[5510000]
[5520000]
[5530000]
[5540000]
[5550000]
[5560000]
[5570000]
[5580000]
[5590000]
[5600000]
[5610000]
[5620000]
[5630000]
[5640000]
[5650000]
[5660000]
[5670000]
[5680000]
[5690000]
[5700000]
[5710000]
[5720000]
[5730000]
[5740000]
[5750000]
[5760000]
[5770000]
[5780000]
[5790000]
[5800000]
[5810000]
[5820000]
[5830000]
[5840000]
[5850000]
[5860000]
[5870000]
[5880000]
[5890000]
[5900000]
[5910000]
[5920000]
[5930000]
[5940000]
[5950000]
[5960000]
[5970000]
[5980000]
[5990000]
[6000000]
[6010000]
[6020000]
[6030000]
[6040000]
[6050000]
[6060000]
[6070000]
[6080000]
[6090000]
[6100000]
[6110000]
[6120000]
[6130000]
[6140000]
[6150000]
[6160000]
[6170000]
[6180000]
[6190000]
[6200000]
[6210000]
[6220000]
[6230000]
[6240000]
[6250000]
[6260000]
[6270000]
[6280000]
[6290000]
[6300000]
[6310000]
[6320000]
[6330000]
[6340000]
[6350000]
[6360000]
[6370000]
[6380000]
[6390000]
[6400000]
[6410000]
[6420000]
[6430000]
[6440000]
[6450000]
[6460000]
[6470000]
[6480000]
[6490000]
[6500000]
[6510000]
[6520000]
[6530000]
[6540000]
[6550000]
[6560000]
[6570000]
[6580000]
[6590000]
[6600000]
[6610000]
[6620000]
[6630000]
[6640000]
[6650000]
[6660000]
[6670000]
[6680000]
[6690000]
[6700000]
[6710000]
[6720000]
[6730000]
[6740000]
[6750000]
[6760000]
[6770000]
[6780000]
[6790000]
[6800000]
[6810000]
[6820000]
[6830000]
[6840000]
[6850000]
[6860000]
[6870000]
[6880000]
[6890000]
[6900000]
[6910000]
[6920000]
[6930000]
[6940000]
[6950000]
[6960000]
[6970000]
[6980000]
[6990000]
[7000000]
[7010000]
[7020000]
[7030000]
[7040000]
[7050000]
[7060000]
[7070000]
[7080000]
[7090000]
[7100000]
[7110000]
[7120000]
[7130000]
[7140000]
[7150000]
[7160000]
[7170000]
[7180000]
[7190000]
[7200000]
[7210000]
[7220000]
[7230000]
[7240000]
[7250000]
[7260000]
[7270000]
[7280000]
[7290000]
[7300000]
[7310000]
[7320000]
[7330000]
[7340000]
[7350000]
[7360000]
[7370000]
[7380000]
[7390000]
[7400000]
[7410000]
[7420000]
[7430000]
[7440000]
[7450000]
[7460000]
[7470000]
[7480000]
[7490000]
[7500000]
[7510000]
[7520000]
[7530000]
[7540000]
[7550000]
[7560000]
[7570000]
[7580000]
[7590000]
[7600000]
[7610000]
[7620000]
[7630000]
[7640000]
[7650000]
[7660000]
[7670000]
[7680000]
[7690000]
[7700000]
[7710000]
[7720000]
[7730000]
[7740000]
[7750000]
[7760000]
[7770000]
[7780000]
[7790000]
[7800000]
[7810000]
[7820000]
[7830000]
[7840000]
[7850000]
[7860000]
[7870000]
[7880000]
[7890000]
[7900000]
[7910000]
[7920000]
[7930000]
[7940000]
[7950000]
[7960000]
[7970000]
[7980000]
[7990000]
[8000000]
[8010000]
[8020000]
[8030000]
[8040000]
[8050000]
[8060000]
[8070000]
[8080000]
[8090000]
[8100000]
[8110000]
[8120000]
[8130000]
[8140000]
[8150000]
[8160000]
[8170000]
[8180000]
[8190000]
[8200000]
[8210000]
[8220000]
[8230000]
[8240000]
[8250000]
[8260000]
[8270000]
[8280000]
[8290000]
[8300000]
[8310000]
[8320000]
[8330000]
[8340000]
[8350000]
[8360000]
[8370000]
[8380000]
[8390000]
[8400000]
[8410000]
[8420000]
[8430000]
[8440000]
[8450000]
[8460000]
[8470000]
[8480000]
[8490000]
[8500000]
[8510000]
[8520000]
[8530000]
[8540000]
[8550000]
[8560000]
[8570000]
[8580000]
[8590000]
[8600000]
[8610000]
[8620000]
[8630000]
[8640000]
[8650000]
[8660000]
[8670000]
[8680000]
[8690000]
[8700000]
[8710000]
[8720000]
[8730000]
[8740000]
[8750000]
[8760000]
[8770000]
[8780000]
[8790000]
[8800000]
[8810000]
[8820000]
[8830000]
[8840000]
[8850000]
[8860000]
[8870000]
[8880000]
[8890000]
[8900000]
[8910000]
[8920000]
[8930000]
[8940000]
[8950000]
[8960000]
[8970000]
[8980000]
[8990000]
[9000000]
[9010000]
[9020000]
[9030000]
[9040000]
[9050000]
[9060000]
[9070000]
[9080000]
[9090000]
[9100000]
[9110000]
[9120000]
[9130000]
[9140000]
[9150000]
[9160000]
[9170000]
[9180000]
[9190000]
[9200000]
[9210000]
[9220000]
[9230000]
[9240000]
[9250000]
[9260000]
[9270000]
[9280000] -done parsing /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.star.cSorted.dupsMarked.bam. Extracting junction info.
junction read elimination tally: $VAR1 = {
'excessive soft clipping' => 61701,
'num_hits: 5 != num_counted_on_fusion_contigs 3 ' => 72,
'seq-similar region overlap' => 707,
'num_hits: 6 != num_counted_on_fusion_contigs 1 ' => 133,
'num_hits: 9 != num_counted_on_fusion_contigs 2 ' => 2,
'num_hits: 6 != num_counted_on_fusion_contigs 5 ' => 10,
'num_hits: 4 != num_counted_on_fusion_contigs 2 ' => 376,
'num_hits: 5 != num_counted_on_fusion_contigs 2 ' => 26,
' ** passed ** ' => 189113,
'small anchor length' => 204,
'num_hits: 3 != num_counted_on_fusion_contigs 2 ' => 8374,
'num_hits: 5 != num_counted_on_fusion_contigs 4 ' => 2100,
'num_hits: 5 != num_counted_on_fusion_contigs 1 ' => 41,
'num_hits: 6 != num_counted_on_fusion_contigs 2 ' => 22,
'num genes matched < 2' => 69,
'exons hit < 2' => 2,
'low complexity anchor region' => 120,
'num_hits: 7 != num_counted_on_fusion_contigs 2 ' => 4,
'num_hits: 6 != num_counted_on_fusion_contigs 4 ' => 24,
'num_hits: 3 != num_counted_on_fusion_contigs 1 ' => 14247,
'num_hits: 9 != num_counted_on_fusion_contigs 3 ' => 18,
'per_id < 96' => 30558,
'num_hits: 4 != num_counted_on_fusion_contigs 3 ' => 3717,
'num_hits: 2 != num_counted_on_fusion_contigs 1 ' => 5876,
'num_hits: 6 != num_counted_on_fusion_contigs 3 ' => 27,
'num_hits: 7 != num_counted_on_fusion_contigs 5 ' => 120,
'num_hits: 4 != num_counted_on_fusion_contigs 1 ' => 247
};
-writing fusion junction support info.
Execution Time = 6.51 minutes. CMD: /usr/local/src/STAR-Fusion/FusionInspector/util/get_fusion_JUNCTION_reads_from_fusion_contig_bam.pl --gtf_file /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.gtf --MIN_ALIGN_PER_ID 96 --bam /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.star.cSorted.dupsMarked.bam --genome_lib_dir ctat_genome_lib_build_dir > /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.star.cSorted.dupsMarked.bam.fusion_junc_reads.sam
Running: touch /tmp/nxf.97TVOzPwtG/chckpts_dir/get_fusion_JUNCTION_reads_from_bam.ok
Running: /usr/local/src/STAR-Fusion/FusionInspector/util/get_fusion_SPANNING_reads_from_bam.from_chim_summary.pl --gtf_file /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.gtf --MIN_ALIGN_PER_ID 96 --bam /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.star.cSorted.dupsMarked.bam --junction_info /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.star.cSorted.dupsMarked.bam.fusion_junction_info --genome_lib_dir ctat_genome_lib_build_dir > /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.star.cSorted.dupsMarked.bam.fusion_span_reads.sam
-outputting the spanning read info: /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.star.cSorted.dupsMarked.bam.fusion_spanning_info.
- counting read alignments among fusion contigs.
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000] -fusion SPANNING read extraction for scaff: AC008735.2--AHI1
[1000]
[2000] -fusion SPANNING read extraction for scaff: AC015911.9--SLFN12L
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000] -fusion SPANNING read extraction for scaff: AC092807.3--DDAH1
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000] -fusion SPANNING read extraction for scaff: ACOXL--AL445669.1
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000] -fusion SPANNING read extraction for scaff: ACOXL--CCDC30
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000]
[41000]
[42000]
[43000]
[44000]
[45000]
[46000]
[47000]
[48000]
[49000]
[50000]
[51000]
[52000]
[53000]
[54000]
[55000]
[56000]
[57000]
[58000]
[59000]
[60000]
[61000]
[62000]
[63000]
[64000]
[65000]
[66000]
[67000]
[68000]
[69000]
[70000]
[71000]
[72000]
[73000]
[74000]
[75000]
[76000]
[77000]
[78000]
[79000]
[80000]
[81000]
[82000]
[83000]
[84000]
[85000]
[86000]
[87000]
[88000]
[89000]
[90000]
[91000]
[92000]
[93000]
[94000]
[95000]
[96000]
[97000] -fusion SPANNING read extraction for scaff: ACSL1--MYL12BP2
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000]
[41000]
[42000]
[43000]
[44000]
[45000]
[46000]
[47000]
[48000]
[49000]
[50000]
[51000]
[52000]
[53000]
[54000]
[55000]
[56000]
[57000]
[58000]
[59000]
[60000]
[61000]
[62000]
[63000]
[64000]
[65000]
[66000]
[67000]
[68000]
[69000]
[70000]
[71000]
[72000]
[73000]
[74000]
[75000]
[76000]
[77000]
[78000]
[79000]
[80000]
[81000]
[82000]
[83000]
[84000]
[85000]
[86000]
[87000]
[88000]
[89000]
[90000]
[91000]
[92000]
[93000]
[94000]
[95000]
[96000] -fusion SPANNING read extraction for scaff: ACSL1--LINC02363
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000]
[41000]
[42000]
[43000]
[44000]
[45000]
[46000]
[47000]
[48000]
[49000]
[50000]
[51000]
[52000]
[53000]
[54000]
[55000]
[56000]
[57000]
[58000]
[59000]
[60000] -fusion SPANNING read extraction for scaff: AFG3L2--NDC80
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000]
[41000]
[42000]
[43000]
[44000]
[45000]
[46000]
[47000]
[48000]
[49000]
[50000]
[51000]
[52000]
[53000]
[54000]
[55000]
[56000]
[57000]
[58000]
[59000]
[60000]
[61000]
[62000]
[63000]
[64000]
[65000]
[66000]
[67000]
[68000]
[69000]
[70000]
[71000]
[72000]
[73000]
[74000]
[75000]
[76000]
[77000]
[78000]
[79000]
[80000]
[81000]
[82000]
[83000]
[84000]
[85000]
[86000]
[87000]
[88000]
[89000]
[90000]
[91000]
[92000]
[93000]
[94000]
[95000]
[96000]
[97000]
[98000]
[99000]
[100000]
[101000]
[102000]
[103000]
[104000]
[105000]
[106000]
[107000]
[108000]
[109000]
[110000]
[111000]
[112000]
[113000]
[114000]
[115000]
[116000]
[117000]
[118000]
[119000]
[120000]
[121000]
[122000]
[123000]
[124000]
[125000]
[126000]
[127000]
[128000]
[129000]
[130000]
[131000]
[132000]
[133000]
[134000]
[135000]
[136000]
[137000]
[138000]
[139000]
[140000]
[141000]
[142000]
[143000]
[144000]
[145000]
[146000]
[147000]
[148000]
[149000]
[150000]
[151000]
[152000]
[153000]
[154000]
[155000]
[156000]
[157000]
[158000]
[159000]
[160000]
[161000]
[162000]
[163000]
[164000]
[165000]
[166000]
[167000]
[168000]
[169000]
[170000]
[171000]
[172000]
[173000]
[174000]
[175000]
[176000]
[177000]
[178000]
[179000]
[180000]
[181000]
[182000]
[183000]
[184000]
[185000]
[186000]
[187000]
[188000]
[189000]
[190000]
[191000]
[192000]
[193000]
[194000]
[195000]
[196000]
[197000]
[198000]
[199000]
[200000]
[201000]
[202000]
[203000]
[204000]
[205000]
[206000]
[207000]
[208000]
[209000]
[210000]
[211000]
[212000]
[213000]
[214000]
[215000]
[216000]
[217000]
[218000]
[219000]
[220000]
[221000]
[222000]
[223000]
[224000]
[225000]
[226000]
[227000]
[228000]
[229000]
[230000]
[231000]
[232000]
[233000]
[234000]
[235000]
[236000]
[237000]
[238000]
[239000]
[240000]
[241000]
[242000]
[243000]
[244000]
[245000]
[246000]
[247000]
[248000]
[249000]
[250000]
[251000]
[252000]
[253000]
[254000]
[255000]
[256000]
[257000]
[258000]
[259000]
[260000]
[261000]
[262000]
[263000]
[264000]
[265000]
[266000]
[267000]
[268000]
[269000]
[270000]
[271000]
[272000]
[273000]
[274000]
[275000]
[276000]
[277000]
[278000]
[279000]
[280000]
[281000]
[282000]
[283000]
[284000]
[285000]
[286000]
[287000]
[288000]
[289000]
[290000]
[291000]
[292000]
[293000]
[294000]
[295000]
[296000]
[297000]
[298000]
[299000]
[300000]
[301000]
[302000]
[303000]
[304000]
[305000]
[306000]
[307000]
[308000]
[309000]
[310000]
[311000]
[312000]
[313000]
[314000]
[315000]
[316000]
[317000]
[318000]
[319000]
[320000]
[321000]
[322000]
[323000]
[324000]
[325000]
[326000]
[327000]
[328000]
[329000]
[330000]
[331000]
[332000]
[333000]
[334000]
[335000]
[336000]
[337000]
[338000]
[339000]
[340000]
[341000]
[342000]
[343000]
[344000] -fusion SPANNING read extraction for scaff: BMPR1B--PDLIM5
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000]
[41000]
[42000]
[43000]
[44000]
[45000]
[46000]
[47000]
[48000]
[49000]
[50000]
[51000]
[52000]
[53000]
[54000]
[55000]
[56000]
[57000]
[58000]
[59000]
[60000]
[61000]
[62000]
[63000]
[64000]
[65000]
[66000]
[67000]
[68000]
[69000]
[70000]
[71000]
[72000]
[73000]
[74000]
[75000]
[76000]
[77000]
[78000]
[79000]
[80000]
[81000]
[82000]
[83000]
[84000]
[85000]
[86000]
[87000]
[88000]
[89000]
[90000]
[91000]
[92000]
[93000]
[94000]
[95000]
[96000]
[97000]
[98000]
[99000]
[100000]
[101000]
[102000]
[103000]
[104000]
[105000]
[106000]
[107000]
[108000]
[109000] -fusion SPANNING read extraction for scaff: BRWD1--HLCS
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000]
[41000]
[42000]
[43000]
[44000]
[45000]
[46000]
[47000]
[48000]
[49000]
[50000]
[51000]
[52000]
[53000]
[54000]
[55000]
[56000]
[57000]
[58000]
[59000]
[60000]
[61000]
[62000]
[63000]
[64000]
[65000]
[66000]
[67000]
[68000]
[69000]
[70000]
[71000]
[72000]
[73000]
[74000]
[75000]
[76000]
[77000]
[78000]
[79000]
[80000]
[81000] -fusion SPANNING read extraction for scaff: CAMK2B--TCAF1
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000]
[41000]
[42000]
[43000]
[44000]
[45000]
[46000]
[47000]
[48000]
[49000]
[50000]
[51000]
[52000]
[53000]
[54000]
[55000]
[56000]
[57000]
[58000]
[59000]
[60000]
[61000]
[62000]
[63000]
[64000]
[65000]
[66000]
[67000]
[68000]
[69000]
[70000]
[71000]
[72000]
[73000]
[74000]
[75000]
[76000]
[77000]
[78000]
[79000]
[80000]
[81000]
[82000]
[83000]
[84000]
[85000]
[86000]
[87000]
[88000]
[89000]
[90000]
[91000]
[92000]
[93000]
[94000]
[95000]
[96000]
[97000]
[98000]
[99000]
[100000]
[101000]
[102000]
[103000]
[104000]
[105000]
[106000]
[107000]
[108000]
[109000]
[110000]
[111000]
[112000]
[113000]
[114000]
[115000]
[116000]
[117000]
[118000]
[119000]
[120000]
[121000]
[122000]
[123000]
[124000]
[125000]
[126000]
[127000]
[128000]
[129000]
[130000]
[131000]
[132000]
[133000]
[134000]
[135000]
[136000]
[137000]
[138000]
[139000]
[140000]
[141000]
[142000]
[143000]
[144000]
[145000]
[146000]
[147000]
[148000]
[149000]
[150000]
[151000]
[152000]
[153000]
[154000]
[155000]
[156000]
[157000]
[158000]
[159000]
[160000]
[161000]
[162000]
[163000]
[164000]
[165000]
[166000]
[167000]
[168000]
[169000]
[170000]
[171000]
[172000]
[173000]
[174000]
[175000]
[176000]
[177000]
[178000]
[179000]
[180000]
[181000]
[182000]
[183000]
[184000]
[185000]
[186000]
[187000]
[188000]
[189000]
[190000]
[191000]
[192000]
[193000]
[194000]
[195000]
[196000]
[197000]
[198000]
[199000]
[200000]
[201000]
[202000]
[203000]
[204000]
[205000]
[206000]
[207000]
[208000]
[209000]
[210000]
[211000]
[212000]
[213000]
[214000]
[215000]
[216000]
[217000]
[218000]
[219000]
[220000]
[221000]
[222000]
[223000]
[224000]
[225000]
[226000]
[227000]
[228000]
[229000]
[230000]
[231000]
[232000]
[233000]
[234000]
[235000]
[236000]
[237000]
[238000]
[239000]
[240000]
[241000]
[242000]
[243000]
[244000]
[245000]
[246000]
[247000]
[248000]
[249000]
[250000]
[251000]
[252000]
[253000]
[254000]
[255000]
[256000]
[257000]
[258000]
[259000]
[260000]
[261000]
[262000]
[263000]
[264000]
[265000]
[266000]
[267000]
[268000]
[269000]
[270000]
[271000]
[272000]
[273000]
[274000]
[275000]
[276000]
[277000]
[278000]
[279000]
[280000]
[281000]
[282000]
[283000]
[284000]
[285000]
[286000]
[287000]
[288000]
[289000]
[290000]
[291000]
[292000]
[293000]
[294000]
[295000]
[296000]
[297000]
[298000]
[299000]
[300000]
[301000]
[302000]
[303000]
[304000]
[305000]
[306000]
[307000]
[308000]
[309000]
[310000]
[311000]
[312000]
[313000]
[314000]
[315000]
[316000]
[317000]
[318000]
[319000]
[320000]
[321000]
[322000]
[323000]
[324000]
[325000]
[326000]
[327000]
[328000]
[329000]
[330000]
[331000]
[332000]
[333000]
[334000]
[335000]
[336000]
[337000]
[338000]
[339000]
[340000]
[341000]
[342000]
[343000]
[344000]
[345000]
[346000]
[347000]
[348000]
[349000]
[350000]
[351000]
[352000]
[353000]
[354000]
[355000]
[356000]
[357000]
[358000]
[359000]
[360000]
[361000]
[362000]
[363000]
[364000]
[365000]
[366000]
[367000]
[368000]
[369000]
[370000]
[371000]
[372000]
[373000]
[374000]
[375000]
[376000]
[377000]
[378000]
[379000]
[380000]
[381000]
[382000]
[383000]
[384000]
[385000]
[386000]
[387000]
[388000]
[389000]
[390000]
[391000]
[392000]
[393000]
[394000]
[395000]
[396000]
[397000]
[398000]
[399000]
[400000]
[401000]
[402000]
[403000]
[404000]
[405000]
[406000]
[407000]
[408000]
[409000]
[410000]
[411000]
[412000]
[413000]
[414000]
[415000]
[416000]
[417000]
[418000]
[419000]
[420000]
[421000]
[422000]
[423000]
[424000]
[425000]
[426000]
[427000]
[428000]
[429000]
[430000]
[431000]
[432000]
[433000]
[434000]
[435000]
[436000]
[437000]
[438000]
[439000]
[440000]
[441000]
[442000]
[443000]
[444000]
[445000]
[446000]
[447000]
[448000]
[449000]
[450000]
[451000]
[452000]
[453000]
[454000]
[455000]
[456000]
[457000]
[458000]
[459000]
[460000]
[461000]
[462000]
[463000]
[464000]
[465000]
[466000]
[467000]
[468000]
[469000]
[470000]
[471000]
[472000]
[473000]
[474000]
[475000]
[476000]
[477000]
[478000]
[479000]
[480000]
[481000]
[482000]
[483000]
[484000]
[485000]
[486000]
[487000]
[488000]
[489000]
[490000]
[491000]
[492000]
[493000]
[494000]
[495000]
[496000]
[497000]
[498000]
[499000]
[500000]
[501000]
[502000]
[503000]
[504000]
[505000]
[506000]
[507000]
[508000]
[509000]
[510000]
[511000]
[512000]
[513000]
[514000]
[515000]
[516000]
[517000]
[518000]
[519000]
[520000]
[521000]
[522000]
[523000]
[524000]
[525000]
[526000]
[527000]
[528000]
[529000]
[530000]
[531000]
[532000]
[533000]
[534000]
[535000]
[536000]
[537000]
[538000]
[539000]
[540000]
[541000]
[542000]
[543000]
[544000]
[545000]
[546000]
[547000]
[548000]
[549000]
[550000]
[551000]
[552000]
[553000]
[554000]
[555000]
[556000]
[557000]
[558000]
[559000]
[560000]
[561000]
[562000]
[563000]
[564000]
[565000]
[566000]
[567000]
[568000]
[569000]
[570000]
[571000]
[572000]
[573000]
[574000]
[575000]
[576000]
[577000]
[578000]
[579000]
[580000]
[581000]
[582000]
[583000]
[584000]
[585000]
[586000]
[587000]
[588000]
[589000]
[590000]
[591000]
[592000]
[593000]
[594000]
[595000]
[596000]
[597000]
[598000]
[599000]
[600000]
[601000]
[602000]
[603000]
[604000]
[605000]
[606000]
[607000]
[608000]
[609000]
[610000]
[611000]
[612000]
[613000]
[614000]
[615000]
[616000]
[617000]
[618000]
[619000]
[620000]
[621000]
[622000]
[623000]
[624000]
[625000]
[626000]
[627000]
[628000]
[629000]
[630000]
[631000]
[632000]
[633000]
[634000]
[635000]
[636000]
[637000]
[638000]
[639000]
[640000]
[641000]
[642000]
[643000]
[644000]
[645000]
[646000]
[647000]
[648000]
[649000]
[650000]
[651000]
[652000]
[653000]
[654000]
[655000]
[656000]
[657000]
[658000]
[659000]
[660000]
[661000]
[662000]
[663000]
[664000]
[665000]
[666000]
[667000]
[668000]
[669000]
[670000]
[671000]
[672000]
[673000]
[674000]
[675000]
[676000]
[677000]
[678000]
[679000]
[680000]
[681000]
[682000]
[683000]
[684000]
[685000]
[686000]
[687000]
[688000]
[689000]
[690000]
[691000]
[692000]
[693000]
[694000]
[695000]
[696000]
[697000]
[698000]
[699000]
[700000]
[701000]
[702000]
[703000]
[704000]
[705000]
[706000]
[707000]
[708000]
[709000]
[710000]
[711000]
[712000]
[713000]
[714000]
[715000]
[716000]
[717000]
[718000]
[719000]
[720000]
[721000]
[722000]
[723000]
[724000]
[725000]
[726000]
[727000]
[728000]
[729000]
[730000]
[731000]
[732000]
[733000]
[734000]
[735000]
[736000]
[737000]
[738000]
[739000]
[740000]
[741000]
[742000]
[743000]
[744000]
[745000]
[746000]
[747000]
[748000]
[749000]
[750000]
[751000]
[752000]
[753000]
[754000]
[755000]
[756000]
[757000]
[758000]
[759000]
[760000]
[761000]
[762000]
[763000]
[764000]
[765000]
[766000]
[767000]
[768000]
[769000]
[770000]
[771000]
[772000]
[773000]
[774000]
[775000]
[776000]
[777000]
[778000]
[779000]
[780000]
[781000]
[782000]
[783000]
[784000]
[785000]
[786000]
[787000]
[788000]
[789000]
[790000]
[791000]
[792000]
[793000]
[794000]
[795000]
[796000]
[797000]
[798000]
[799000]
[800000]
[801000]
[802000]
[803000]
[804000]
[805000]
[806000]
[807000]
[808000]
[809000]
[810000]
[811000]
[812000]
[813000]
[814000]
[815000]
[816000]
[817000]
[818000]
[819000]
[820000]
[821000]
[822000]
[823000]
[824000]
[825000]
[826000]
[827000]
[828000]
[829000]
[830000]
[831000]
[832000]
[833000]
[834000]
[835000]
[836000]
[837000]
[838000]
[839000]
[840000]
[841000]
[842000]
[843000]
[844000]
[845000]
[846000]
[847000]
[848000]
[849000]
[850000]
[851000]
[852000]
[853000]
[854000]
[855000]
[856000]
[857000]
[858000]
[859000]
[860000]
[861000]
[862000]
[863000]
[864000]
[865000]
[866000]
[867000]
[868000]
[869000]
[870000]
[871000]
[872000]
[873000]
[874000]
[875000]
[876000]
[877000]
[878000]
[879000]
[880000]
[881000]
[882000]
[883000]
[884000]
[885000]
[886000]
[887000]
[888000]
[889000]
[890000]
[891000]
[892000]
[893000]
[894000]
[895000]
[896000]
[897000]
[898000]
[899000]
[900000]
[901000]
[902000]
[903000]
[904000]
[905000]
[906000]
[907000]
[908000]
[909000]
[910000]
[911000]
[912000]
[913000]
[914000]
[915000]
[916000]
[917000]
[918000]
[919000]
[920000]
[921000]
[922000]
[923000]
[924000]
[925000]
[926000]
[927000]
[928000]
[929000]
[930000]
[931000]
[932000]
[933000]
[934000]
[935000]
[936000]
[937000]
[938000]
[939000]
[940000]
[941000]
[942000]
[943000]
[944000]
[945000]
[946000]
[947000]
[948000]
[949000]
[950000]
[951000]
[952000]
[953000]
[954000]
[955000]
[956000]
[957000]
[958000]
[959000]
[960000]
[961000]
[962000] -fusion SPANNING read extraction for scaff: CCT8--ERG
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000]
[41000]
[42000]
[43000]
[44000]
[45000]
[46000]
[47000]
[48000]
[49000]
[50000]
[51000]
[52000]
[53000]
[54000]
[55000]
[56000]
[57000]
[58000]
[59000]
[60000]
[61000]
[62000]
[63000]
[64000]
[65000]
[66000]
[67000]
[68000]
[69000]
[70000]
[71000]
[72000]
[73000]
[74000]
[75000]
[76000]
[77000]
[78000]
[79000]
[80000]
[81000]
[82000]
[83000]
[84000]
[85000]
[86000]
[87000]
[88000]
[89000]
[90000]
[91000]
[92000]
[93000]
[94000]
[95000]
[96000]
[97000]
[98000]
[99000]
[100000]
[101000]
[102000]
[103000]
[104000]
[105000] -fusion SPANNING read extraction for scaff: CCT8--BRWD1
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000] -fusion SPANNING read extraction for scaff: CPNE4--RNF144B
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000] -fusion SPANNING read extraction for scaff: DCP2--LRRC4C
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000]
[41000]
[42000]
[43000]
[44000]
[45000]
[46000]
[47000]
[48000]
[49000]
[50000]
[51000]
[52000]
[53000]
[54000]
[55000]
[56000]
[57000]
[58000]
[59000]
[60000]
[61000]
[62000]
[63000]
[64000]
[65000]
[66000]
[67000]
[68000]
[69000]
[70000]
[71000]
[72000]
[73000]
[74000]
[75000]
[76000]
[77000]
[78000]
[79000]
[80000]
[81000]
[82000]
[83000]
[84000]
[85000]
[86000]
[87000]
[88000]
[89000]
[90000]
[91000]
[92000]
[93000]
[94000]
[95000]
[96000]
[97000]
[98000]
[99000]
[100000]
[101000]
[102000]
[103000]
[104000]
[105000]
[106000]
[107000]
[108000]
[109000]
[110000]
[111000]
[112000]
[113000]
[114000]
[115000]
[116000]
[117000]
[118000]
[119000]
[120000]
[121000]
[122000]
[123000]
[124000]
[125000]
[126000]
[127000]
[128000]
[129000]
[130000]
[131000]
[132000]
[133000]
[134000]
[135000]
[136000]
[137000]
[138000]
[139000]
[140000]
[141000]
[142000]
[143000]
[144000]
[145000]
[146000]
[147000]
[148000]
[149000]
[150000]
[151000] -fusion SPANNING read extraction for scaff: FBXO11--PPARGC1A
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000]
[41000]
[42000]
[43000]
[44000]
[45000]
[46000]
[47000]
[48000]
[49000]
[50000]
[51000]
[52000]
[53000]
[54000]
[55000]
[56000]
[57000]
[58000]
[59000]
[60000]
[61000]
[62000]
[63000]
[64000]
[65000]
[66000]
[67000]
[68000]
[69000]
[70000]
[71000]
[72000]
[73000]
[74000]
[75000]
[76000]
[77000]
[78000]
[79000]
[80000]
[81000]
[82000]
[83000]
[84000]
[85000]
[86000]
[87000]
[88000]
[89000]
[90000]
[91000]
[92000]
[93000]
[94000]
[95000]
[96000]
[97000]
[98000]
[99000]
[100000]
[101000]
[102000]
[103000]
[104000]
[105000]
[106000]
[107000]
[108000]
[109000]
[110000]
[111000]
[112000]
[113000]
[114000]
[115000]
[116000]
[117000]
[118000]
[119000]
[120000]
[121000]
[122000]
[123000]
[124000]
[125000]
[126000]
[127000]
[128000]
[129000]
[130000]
[131000]
[132000]
[133000]
[134000]
[135000]
[136000]
[137000]
[138000]
[139000]
[140000]
[141000]
[142000]
[143000]
[144000]
[145000]
[146000]
[147000]
[148000]
[149000]
[150000]
[151000] -fusion SPANNING read extraction for scaff: FBXO11--DHX15
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000] -fusion SPANNING read extraction for scaff: FBXO25--AC240565.1
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000]
[41000]
[42000]
[43000]
[44000]
[45000]
[46000]
[47000]
[48000]
[49000]
[50000]
[51000]
[52000]
[53000]
[54000]
[55000]
[56000]
[57000]
[58000]
[59000]
[60000]
[61000]
[62000]
[63000]
[64000]
[65000]
[66000]
[67000]
[68000]
[69000]
[70000]
[71000]
[72000]
[73000]
[74000]
[75000]
[76000]
[77000]
[78000]
[79000]
[80000]
[81000]
[82000]
[83000]
[84000]
[85000]
[86000]
[87000]
[88000]
[89000]
[90000]
[91000]
[92000]
[93000]
[94000]
[95000]
[96000]
[97000]
[98000]
[99000]
[100000]
[101000]
[102000]
[103000]
[104000]
[105000]
[106000]
[107000]
[108000]
[109000]
[110000]
[111000]
[112000]
[113000]
[114000]
[115000]
[116000]
[117000]
[118000]
[119000]
[120000]
[121000]
[122000]
[123000]
[124000]
[125000]
[126000]
[127000]
[128000]
[129000]
[130000]
[131000]
[132000]
[133000]
[134000]
[135000]
[136000] -fusion SPANNING read extraction for scaff: GCN1--DNAJC16
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000]
[41000]
[42000]
[43000]
[44000]
[45000]
[46000]
[47000]
[48000]
[49000]
[50000]
[51000]
[52000]
[53000]
[54000]
[55000]
[56000]
[57000]
[58000]
[59000]
[60000]
[61000]
[62000]
[63000]
[64000]
[65000]
[66000]
[67000]
[68000]
[69000]
[70000]
[71000]
[72000]
[73000]
[74000]
[75000]
[76000]
[77000]
[78000]
[79000]
[80000]
[81000]
[82000]
[83000]
[84000] -fusion SPANNING read extraction for scaff: GFPT1--MAK
[1000]
[2000]
[3000] -fusion SPANNING read extraction for scaff: GTF2A1L--STON1-GTF2A1L
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000]
[41000]
[42000]
[43000]
[44000]
[45000]
[46000]
[47000] -fusion SPANNING read extraction for scaff: HLCS--RWDD2B
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000] -fusion SPANNING read extraction for scaff: KALRN--AC092266.1
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000] -fusion SPANNING read extraction for scaff: KALRN--LSINCT5
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000] -fusion SPANNING read extraction for scaff: MAK--PDE4D
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000]
[41000]
[42000]
[43000]
[44000]
[45000]
[46000]
[47000]
[48000] -fusion SPANNING read extraction for scaff: MTRR--CPNE4
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000]
[41000]
[42000]
[43000]
[44000]
[45000]
[46000]
[47000]
[48000]
[49000]
[50000]
[51000]
[52000]
[53000]
[54000]
[55000]
[56000]
[57000]
[58000]
[59000]
[60000]
[61000]
[62000]
[63000]
[64000]
[65000]
[66000]
[67000]
[68000]
[69000]
[70000]
[71000]
[72000]
[73000]
[74000]
[75000]
[76000]
[77000]
[78000]
[79000]
[80000]
[81000]
[82000]
[83000]
[84000]
[85000]
[86000]
[87000] -fusion SPANNING read extraction for scaff: PATJ--PGLYRP2
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000]
[41000]
[42000]
[43000]
[44000]
[45000]
[46000]
[47000]
[48000]
[49000]
[50000]
[51000]
[52000]
[53000]
[54000]
[55000]
[56000]
[57000]
[58000] -fusion SPANNING read extraction for scaff: PCDHA11--PCDHA13
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000]
[41000]
[42000]
[43000]
[44000]
[45000]
[46000]
[47000]
[48000]
[49000]
[50000]
[51000]
[52000]
[53000]
[54000]
[55000]
[56000] -fusion SPANNING read extraction for scaff: PCDHA11--PCDHAC2
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000]
[41000]
[42000]
[43000]
[44000]
[45000]
[46000]
[47000]
[48000]
[49000]
[50000]
[51000]
[52000]
[53000]
[54000]
[55000]
[56000]
[57000]
[58000]
[59000]
[60000]
[61000] -fusion SPANNING read extraction for scaff: PCDHA11--PCDHAC1
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000] -fusion SPANNING read extraction for scaff: PCDHA4--PCDHAC2
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000] -fusion SPANNING read extraction for scaff: PCDHA4--PCDHAC1
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000] -fusion SPANNING read extraction for scaff: PCDHA4--PCDHA13
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000]
[41000]
[42000]
[43000]
[44000]
[45000] -fusion SPANNING read extraction for scaff: PCDHA6--PCDHAC1
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000] -fusion SPANNING read extraction for scaff: PCDHA6--PCDHAC2
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000]
[41000]
[42000] -fusion SPANNING read extraction for scaff: PCDHA6--PCDHA13
[1000]
[2000]
[3000]
[4000]
[5000]
[6000] -fusion SPANNING read extraction for scaff: PCDHGA2--PCDHGC4
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000] -fusion SPANNING read extraction for scaff: PCDHGA2--PCDHGA8
[1000]
[2000]
[3000]
[4000]
[5000]
[6000] -fusion SPANNING read extraction for scaff: PCDHGA2--PCDHGC5
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000] -fusion SPANNING read extraction for scaff: PCDHGA2--PCDHGC3
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000] -fusion SPANNING read extraction for scaff: PCDHGA2--PCDHGB6
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000] -fusion SPANNING read extraction for scaff: PCDHGA2--PCDHGB7
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000] -fusion SPANNING read extraction for scaff: PCDHGA2--PCDHGA11
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000] -fusion SPANNING read extraction for scaff: PCDHGA2--PCDHGA12
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000] -fusion SPANNING read extraction for scaff: PCDHGA2--PCDHGA9
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000]
[41000] -fusion SPANNING read extraction for scaff: PCDHGA2--PCDHGA10
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000] -fusion SPANNING read extraction for scaff: PCDHGA3--PCDHGA8
[1000]
[2000]
[3000]
[4000]
[5000]
[6000] -fusion SPANNING read extraction for scaff: PCDHGA3--PCDHGC4
[1000]
[2000]
[3000]
[4000]
[5000]
[6000] -fusion SPANNING read extraction for scaff: PCDHGA3--PCDHGC5
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000] -fusion SPANNING read extraction for scaff: PCDHGA3--PCDHGC3
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000] -fusion SPANNING read extraction for scaff: PCDHGA3--PCDHGB6
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000] -fusion SPANNING read extraction for scaff: PCDHGA3--PCDHGB7
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000] -fusion SPANNING read extraction for scaff: PCDHGA3--PCDHGA11
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000] -fusion SPANNING read extraction for scaff: PCDHGA3--PCDHGA12
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000] -fusion SPANNING read extraction for scaff: PCDHGA3--PCDHGA9
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000]
[41000] -fusion SPANNING read extraction for scaff: PCDHGA3--PCDHGA10
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000] -fusion SPANNING read extraction for scaff: PCDHGA5--PCDHGA8
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000] -fusion SPANNING read extraction for scaff: PCDHGA5--PCDHGA9
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000] -fusion SPANNING read extraction for scaff: PCDHGA5--PCDHGB6
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000]
[41000] -fusion SPANNING read extraction for scaff: PCDHGA5--PCDHGA10
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000] -fusion SPANNING read extraction for scaff: PCDHGA5--PCDHGB7
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000] -fusion SPANNING read extraction for scaff: PCDHGA5--PCDHGA11
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000] -fusion SPANNING read extraction for scaff: PCDHGA5--PCDHGA12
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000] -fusion SPANNING read extraction for scaff: PCDHGA5--PCDHGC3
[1000]
[2000]
[3000]
[4000]
[5000]
[6000] -fusion SPANNING read extraction for scaff: PCDHGA5--PCDHGC4
[1000]
[2000]
[3000]
[4000]
[5000]
[6000] -fusion SPANNING read extraction for scaff: PCDHGA5--PCDHGC5
[1000]
[2000]
[3000]
[4000]
[5000]
[6000] -fusion SPANNING read extraction for scaff: PCDHGA6--PCDHGC4
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000] -fusion SPANNING read extraction for scaff: PCDHGA6--PCDHGA8
[1000]
[2000]
[3000]
[4000]
[5000]
[6000] -fusion SPANNING read extraction for scaff: PCDHGA6--PCDHGC5
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000] -fusion SPANNING read extraction for scaff: PCDHGA6--PCDHGC3
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000] -fusion SPANNING read extraction for scaff: PCDHGA6--PCDHGB6
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000] -fusion SPANNING read extraction for scaff: PCDHGA6--PCDHGB7
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000] -fusion SPANNING read extraction for scaff: PCDHGA6--PCDHGA11
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000] -fusion SPANNING read extraction for scaff: PCDHGA6--PCDHGA12
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000] -fusion SPANNING read extraction for scaff: PCDHGA6--PCDHGA9
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000]
[41000] -fusion SPANNING read extraction for scaff: PCDHGA6--PCDHGA10
[1000]
[2000]
[3000]
[4000]
[5000]
[6000] -fusion SPANNING read extraction for scaff: PCDHGB2--PCDHGC4
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000] -fusion SPANNING read extraction for scaff: PCDHGB2--PCDHGA8
[1000]
[2000]
[3000]
[4000]
[5000]
[6000] -fusion SPANNING read extraction for scaff: PCDHGB2--PCDHGC5
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000] -fusion SPANNING read extraction for scaff: PCDHGB2--PCDHGC3
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000] -fusion SPANNING read extraction for scaff: PCDHGB2--PCDHGB6
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000] -fusion SPANNING read extraction for scaff: PCDHGB2--PCDHGB7
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000] -fusion SPANNING read extraction for scaff: PCDHGB2--PCDHGA11
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000] -fusion SPANNING read extraction for scaff: PCDHGB2--PCDHGA12
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000] -fusion SPANNING read extraction for scaff: PCDHGB2--PCDHGA9
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000]
[41000]
[42000] -fusion SPANNING read extraction for scaff: PCDHGB2--PCDHGA10
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000]
[41000]
[42000]
[43000]
[44000]
[45000]
[46000]
[47000]
[48000]
[49000]
[50000]
[51000]
[52000]
[53000]
[54000]
[55000]
[56000]
[57000]
[58000]
[59000]
[60000]
[61000]
[62000]
[63000]
[64000]
[65000]
[66000]
[67000]
[68000]
[69000]
[70000]
[71000]
[72000]
[73000]
[74000]
[75000]
[76000]
[77000]
[78000]
[79000]
[80000]
[81000]
[82000]
[83000]
[84000]
[85000]
[86000]
[87000]
[88000]
[89000]
[90000]
[91000]
[92000]
[93000]
[94000]
[95000]
[96000]
[97000]
[98000]
[99000]
[100000]
[101000]
[102000]
[103000]
[104000]
[105000]
[106000]
[107000]
[108000]
[109000]
[110000]
[111000]
[112000]
[113000]
[114000]
[115000]
[116000]
[117000]
[118000]
[119000]
[120000]
[121000]
[122000]
[123000]
[124000]
[125000]
[126000]
[127000]
[128000]
[129000]
[130000]
[131000]
[132000]
[133000]
[134000]
[135000]
[136000]
[137000]
[138000]
[139000]
[140000]
[141000]
[142000]
[143000]
[144000]
[145000]
[146000]
[147000]
[148000]
[149000]
[150000]
[151000]
[152000]
[153000]
[154000]
[155000]
[156000]
[157000]
[158000]
[159000]
[160000] -fusion SPANNING read extraction for scaff: PCLO--GLI3
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000]
[41000]
[42000]
[43000]
[44000]
[45000]
[46000]
[47000]
[48000]
[49000]
[50000]
[51000]
[52000]
[53000]
[54000]
[55000]
[56000]
[57000]
[58000]
[59000]
[60000]
[61000]
[62000]
[63000]
[64000]
[65000]
[66000]
[67000]
[68000]
[69000]
[70000]
[71000]
[72000]
[73000]
[74000]
[75000]
[76000]
[77000]
[78000]
[79000]
[80000]
[81000]
[82000]
[83000]
[84000]
[85000]
[86000]
[87000]
[88000]
[89000]
[90000]
[91000]
[92000]
[93000]
[94000]
[95000]
[96000]
[97000]
[98000]
[99000]
[100000]
[101000]
[102000]
[103000]
[104000]
[105000]
[106000]
[107000]
[108000]
[109000]
[110000] -fusion SPANNING read extraction for scaff: PDE4D--PPARGC1A
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000]
[41000]
[42000]
[43000]
[44000]
[45000]
[46000]
[47000]
[48000]
[49000]
[50000]
[51000]
[52000]
[53000]
[54000]
[55000]
[56000]
[57000]
[58000]
[59000]
[60000]
[61000]
[62000]
[63000]
[64000]
[65000]
[66000]
[67000]
[68000]
[69000]
[70000]
[71000]
[72000]
[73000]
[74000]
[75000]
[76000]
[77000]
[78000]
[79000]
[80000]
[81000]
[82000]
[83000]
[84000]
[85000]
[86000]
[87000]
[88000]
[89000]
[90000]
[91000]
[92000]
[93000]
[94000]
[95000]
[96000]
[97000]
[98000]
[99000]
[100000]
[101000]
[102000]
[103000]
[104000]
[105000]
[106000]
[107000]
[108000]
[109000]
[110000]
[111000]
[112000]
[113000]
[114000]
[115000]
[116000]
[117000]
[118000]
[119000]
[120000]
[121000]
[122000]
[123000]
[124000]
[125000]
[126000]
[127000]
[128000]
[129000]
[130000]
[131000]
[132000]
[133000]
[134000]
[135000]
[136000]
[137000]
[138000]
[139000]
[140000]
[141000]
[142000]
[143000]
[144000]
[145000]
[146000]
[147000]
[148000]
[149000]
[150000]
[151000]
[152000]
[153000]
[154000]
[155000]
[156000]
[157000]
[158000]
[159000]
[160000]
[161000]
[162000]
[163000]
[164000]
[165000]
[166000]
[167000]
[168000]
[169000]
[170000]
[171000]
[172000]
[173000]
[174000]
[175000]
[176000]
[177000]
[178000]
[179000]
[180000]
[181000]
[182000]
[183000]
[184000]
[185000]
[186000]
[187000]
[188000]
[189000]
[190000]
[191000]
[192000]
[193000]
[194000]
[195000]
[196000]
[197000]
[198000]
[199000]
[200000]
[201000]
[202000]
[203000]
[204000]
[205000]
[206000]
[207000]
[208000]
[209000]
[210000]
[211000]
[212000]
[213000]
[214000]
[215000]
[216000]
[217000]
[218000]
[219000]
[220000]
[221000]
[222000]
[223000]
[224000]
[225000]
[226000]
[227000]
[228000]
[229000]
[230000]
[231000]
[232000]
[233000]
[234000]
[235000]
[236000]
[237000]
[238000]
[239000]
[240000]
[241000]
[242000]
[243000]
[244000]
[245000]
[246000]
[247000]
[248000]
[249000]
[250000]
[251000]
[252000]
[253000]
[254000]
[255000]
[256000]
[257000]
[258000]
[259000]
[260000]
[261000]
[262000]
[263000]
[264000]
[265000]
[266000]
[267000]
[268000]
[269000]
[270000]
[271000]
[272000]
[273000]
[274000]
[275000]
[276000]
[277000]
[278000]
[279000]
[280000]
[281000]
[282000]
[283000]
[284000]
[285000]
[286000]
[287000]
[288000]
[289000]
[290000]
[291000]
[292000]
[293000]
[294000]
[295000]
[296000]
[297000]
[298000]
[299000]
[300000]
[301000]
[302000]
[303000]
[304000]
[305000]
[306000]
[307000]
[308000]
[309000]
[310000]
[311000]
[312000]
[313000]
[314000]
[315000]
[316000]
[317000]
[318000]
[319000]
[320000]
[321000]
[322000]
[323000]
[324000]
[325000]
[326000]
[327000]
[328000]
[329000]
[330000]
[331000]
[332000]
[333000]
[334000]
[335000]
[336000]
[337000]
[338000]
[339000]
[340000]
[341000]
[342000]
[343000]
[344000]
[345000]
[346000]
[347000]
[348000]
[349000]
[350000]
[351000]
[352000]
[353000]
[354000]
[355000]
[356000]
[357000]
[358000]
[359000]
[360000]
[361000]
[362000]
[363000]
[364000]
[365000]
[366000]
[367000]
[368000]
[369000]
[370000]
[371000]
[372000]
[373000]
[374000]
[375000]
[376000]
[377000]
[378000]
[379000]
[380000]
[381000]
[382000]
[383000]
[384000]
[385000]
[386000]
[387000]
[388000]
[389000]
[390000]
[391000]
[392000]
[393000]
[394000]
[395000]
[396000]
[397000]
[398000]
[399000]
[400000]
[401000]
[402000]
[403000]
[404000]
[405000]
[406000]
[407000]
[408000]
[409000]
[410000]
[411000]
[412000]
[413000]
[414000]
[415000]
[416000]
[417000]
[418000]
[419000]
[420000]
[421000]
[422000]
[423000]
[424000]
[425000]
[426000]
[427000]
[428000]
[429000]
[430000]
[431000]
[432000]
[433000]
[434000]
[435000]
[436000]
[437000]
[438000]
[439000]
[440000]
[441000]
[442000]
[443000]
[444000]
[445000]
[446000]
[447000]
[448000]
[449000]
[450000]
[451000]
[452000]
[453000]
[454000]
[455000]
[456000]
[457000]
[458000]
[459000]
[460000]
[461000]
[462000]
[463000]
[464000]
[465000]
[466000]
[467000]
[468000]
[469000]
[470000]
[471000]
[472000]
[473000]
[474000]
[475000]
[476000]
[477000]
[478000]
[479000]
[480000]
[481000]
[482000]
[483000]
[484000]
[485000]
[486000]
[487000]
[488000]
[489000]
[490000]
[491000]
[492000]
[493000]
[494000]
[495000]
[496000]
[497000]
[498000]
[499000]
[500000]
[501000]
[502000]
[503000]
[504000]
[505000]
[506000]
[507000]
[508000]
[509000]
[510000]
[511000]
[512000]
[513000]
[514000]
[515000]
[516000]
[517000]
[518000]
[519000]
[520000]
[521000]
[522000]
[523000]
[524000]
[525000]
[526000]
[527000]
[528000]
[529000]
[530000]
[531000]
[532000]
[533000]
[534000]
[535000]
[536000]
[537000]
[538000]
[539000]
[540000]
[541000]
[542000]
[543000]
[544000]
[545000]
[546000]
[547000]
[548000]
[549000]
[550000]
[551000]
[552000]
[553000]
[554000]
[555000]
[556000]
[557000]
[558000]
[559000]
[560000]
[561000]
[562000]
[563000]
[564000]
[565000]
[566000]
[567000]
[568000]
[569000]
[570000]
[571000]
[572000]
[573000]
[574000]
[575000]
[576000]
[577000]
[578000]
[579000]
[580000]
[581000]
[582000]
[583000]
[584000]
[585000]
[586000]
[587000]
[588000]
[589000]
[590000]
[591000]
[592000]
[593000]
[594000]
[595000]
[596000]
[597000]
[598000]
[599000]
[600000]
[601000]
[602000]
[603000]
[604000]
[605000]
[606000]
[607000]
[608000]
[609000]
[610000]
[611000]
[612000]
[613000]
[614000]
[615000]
[616000]
[617000]
[618000]
[619000]
[620000]
[621000]
[622000]
[623000]
[624000]
[625000]
[626000]
[627000]
[628000]
[629000]
[630000]
[631000]
[632000]
[633000]
[634000]
[635000]
[636000]
[637000]
[638000]
[639000]
[640000]
[641000]
[642000]
[643000]
[644000]
[645000]
[646000]
[647000]
[648000]
[649000]
[650000]
[651000]
[652000]
[653000]
[654000]
[655000]
[656000]
[657000]
[658000]
[659000]
[660000]
[661000]
[662000]
[663000]
[664000]
[665000]
[666000]
[667000]
[668000]
[669000]
[670000]
[671000]
[672000]
[673000]
[674000]
[675000]
[676000]
[677000]
[678000]
[679000]
[680000]
[681000]
[682000]
[683000]
[684000]
[685000]
[686000]
[687000]
[688000]
[689000]
[690000]
[691000]
[692000]
[693000]
[694000]
[695000]
[696000]
[697000]
[698000]
[699000]
[700000]
[701000]
[702000]
[703000]
[704000]
[705000]
[706000]
[707000]
[708000]
[709000]
[710000]
[711000]
[712000]
[713000]
[714000]
[715000]
[716000]
[717000]
[718000]
[719000]
[720000]
[721000]
[722000]
[723000]
[724000]
[725000]
[726000]
[727000]
[728000]
[729000]
[730000]
[731000]
[732000]
[733000]
[734000]
[735000]
[736000]
[737000]
[738000]
[739000]
[740000]
[741000]
[742000]
[743000]
[744000]
[745000]
[746000]
[747000]
[748000]
[749000]
[750000]
[751000]
[752000]
[753000]
[754000]
[755000]
[756000]
[757000]
[758000]
[759000]
[760000]
[761000]
[762000]
[763000]
[764000]
[765000]
[766000]
[767000]
[768000]
[769000]
[770000]
[771000]
[772000]
[773000]
[774000]
[775000]
[776000]
[777000]
[778000]
[779000]
[780000]
[781000]
[782000]
[783000]
[784000]
[785000]
[786000]
[787000]
[788000]
[789000]
[790000]
[791000]
[792000]
[793000]
[794000]
[795000]
[796000]
[797000]
[798000]
[799000]
[800000]
[801000]
[802000]
[803000]
[804000]
[805000]
[806000]
[807000]
[808000]
[809000]
[810000]
[811000]
[812000]
[813000]
[814000]
[815000]
[816000]
[817000]
[818000]
[819000]
[820000]
[821000]
[822000]
[823000]
[824000]
[825000]
[826000]
[827000]
[828000]
[829000]
[830000]
[831000]
[832000]
[833000]
[834000]
[835000]
[836000]
[837000]
[838000]
[839000]
[840000]
[841000]
[842000]
[843000]
[844000]
[845000]
[846000]
[847000]
[848000]
[849000]
[850000]
[851000]
[852000]
[853000]
[854000]
[855000]
[856000]
[857000]
[858000]
[859000]
[860000]
[861000]
[862000]
[863000]
[864000]
[865000]
[866000]
[867000]
[868000]
[869000]
[870000]
[871000]
[872000]
[873000]
[874000]
[875000]
[876000]
[877000]
[878000]
[879000]
[880000]
[881000]
[882000]
[883000]
[884000]
[885000]
[886000]
[887000]
[888000]
[889000]
[890000]
[891000]
[892000]
[893000]
[894000]
[895000]
[896000]
[897000]
[898000]
[899000]
[900000]
[901000]
[902000]
[903000]
[904000]
[905000]
[906000]
[907000]
[908000]
[909000]
[910000]
[911000]
[912000]
[913000]
[914000]
[915000]
[916000]
[917000]
[918000]
[919000]
[920000]
[921000]
[922000]
[923000] -fusion SPANNING read extraction for scaff: PDXDC1--NPIPB5
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000] -fusion SPANNING read extraction for scaff: PIK3R4--AC068633.1
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000] -fusion SPANNING read extraction for scaff: POLR2J4--UPK3BL1
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000]
[41000]
[42000]
[43000]
[44000]
[45000]
[46000]
[47000]
[48000]
[49000]
[50000]
[51000]
[52000]
[53000]
[54000]
[55000]
[56000]
[57000]
[58000]
[59000]
[60000]
[61000]
[62000]
[63000]
[64000]
[65000]
[66000]
[67000]
[68000]
[69000]
[70000]
[71000]
[72000]
[73000]
[74000]
[75000]
[76000]
[77000]
[78000]
[79000]
[80000]
[81000]
[82000]
[83000]
[84000]
[85000]
[86000]
[87000]
[88000]
[89000]
[90000]
[91000]
[92000]
[93000]
[94000]
[95000]
[96000]
[97000]
[98000]
[99000]
[100000]
[101000]
[102000]
[103000]
[104000]
[105000]
[106000]
[107000]
[108000]
[109000]
[110000]
[111000]
[112000]
[113000]
[114000]
[115000]
[116000]
[117000]
[118000]
[119000]
[120000]
[121000]
[122000]
[123000]
[124000]
[125000]
[126000]
[127000]
[128000]
[129000]
[130000]
[131000]
[132000]
[133000]
[134000]
[135000]
[136000]
[137000]
[138000]
[139000]
[140000]
[141000]
[142000]
[143000]
[144000]
[145000]
[146000]
[147000]
[148000]
[149000]
[150000]
[151000]
[152000]
[153000]
[154000]
[155000]
[156000]
[157000]
[158000]
[159000]
[160000]
[161000]
[162000]
[163000]
[164000]
[165000]
[166000]
[167000]
[168000]
[169000]
[170000]
[171000]
[172000]
[173000]
[174000]
[175000]
[176000]
[177000]
[178000]
[179000]
[180000]
[181000]
[182000]
[183000]
[184000]
[185000]
[186000]
[187000]
[188000]
[189000]
[190000]
[191000]
[192000]
[193000]
[194000]
[195000]
[196000]
[197000]
[198000]
[199000]
[200000]
[201000]
[202000]
[203000]
[204000]
[205000]
[206000]
[207000]
[208000]
[209000]
[210000]
[211000]
[212000]
[213000]
[214000]
[215000]
[216000]
[217000]
[218000]
[219000]
[220000]
[221000]
[222000]
[223000]
[224000]
[225000]
[226000]
[227000]
[228000]
[229000]
[230000]
[231000]
[232000]
[233000]
[234000]
[235000]
[236000]
[237000]
[238000]
[239000]
[240000]
[241000]
[242000]
[243000]
[244000]
[245000]
[246000]
[247000]
[248000]
[249000]
[250000]
[251000]
[252000]
[253000]
[254000]
[255000]
[256000]
[257000]
[258000]
[259000]
[260000]
[261000]
[262000]
[263000]
[264000]
[265000]
[266000]
[267000]
[268000]
[269000]
[270000]
[271000]
[272000]
[273000]
[274000]
[275000]
[276000]
[277000]
[278000]
[279000]
[280000]
[281000]
[282000]
[283000]
[284000]
[285000]
[286000]
[287000]
[288000]
[289000]
[290000]
[291000]
[292000]
[293000]
[294000]
[295000]
[296000]
[297000]
[298000]
[299000]
[300000]
[301000]
[302000]
[303000]
[304000]
[305000]
[306000]
[307000]
[308000]
[309000]
[310000]
[311000]
[312000]
[313000]
[314000]
[315000]
[316000]
[317000]
[318000]
[319000]
[320000]
[321000]
[322000]
[323000]
[324000]
[325000]
[326000]
[327000]
[328000]
[329000]
[330000]
[331000]
[332000]
[333000]
[334000]
[335000]
[336000]
[337000]
[338000]
[339000]
[340000]
[341000]
[342000]
[343000]
[344000]
[345000]
[346000]
[347000]
[348000]
[349000]
[350000]
[351000]
[352000]
[353000]
[354000]
[355000]
[356000]
[357000]
[358000]
[359000]
[360000]
[361000]
[362000]
[363000]
[364000]
[365000]
[366000]
[367000]
[368000]
[369000]
[370000]
[371000]
[372000]
[373000]
[374000]
[375000]
[376000]
[377000]
[378000]
[379000]
[380000]
[381000]
[382000]
[383000]
[384000]
[385000]
[386000]
[387000]
[388000]
[389000]
[390000]
[391000]
[392000]
[393000]
[394000]
[395000]
[396000]
[397000]
[398000]
[399000]
[400000]
[401000]
[402000]
[403000]
[404000]
[405000]
[406000]
[407000]
[408000]
[409000]
[410000]
[411000]
[412000]
[413000]
[414000]
[415000]
[416000]
[417000]
[418000]
[419000]
[420000]
[421000]
[422000]
[423000]
[424000]
[425000]
[426000]
[427000]
[428000]
[429000]
[430000]
[431000]
[432000]
[433000]
[434000]
[435000]
[436000]
[437000]
[438000]
[439000]
[440000]
[441000]
[442000]
[443000]
[444000]
[445000]
[446000]
[447000]
[448000]
[449000]
[450000]
[451000]
[452000]
[453000]
[454000]
[455000]
[456000]
[457000]
[458000]
[459000]
[460000]
[461000]
[462000]
[463000]
[464000]
[465000]
[466000]
[467000]
[468000]
[469000]
[470000]
[471000]
[472000]
[473000]
[474000]
[475000]
[476000]
[477000]
[478000]
[479000]
[480000]
[481000]
[482000]
[483000]
[484000]
[485000]
[486000]
[487000]
[488000]
[489000]
[490000]
[491000]
[492000]
[493000]
[494000]
[495000]
[496000]
[497000]
[498000]
[499000]
[500000]
[501000]
[502000]
[503000]
[504000]
[505000]
[506000]
[507000]
[508000]
[509000]
[510000]
[511000]
[512000]
[513000]
[514000]
[515000]
[516000]
[517000]
[518000]
[519000]
[520000]
[521000]
[522000]
[523000]
[524000]
[525000]
[526000]
[527000]
[528000]
[529000]
[530000]
[531000]
[532000]
[533000]
[534000]
[535000]
[536000]
[537000]
[538000]
[539000]
[540000]
[541000]
[542000]
[543000]
[544000]
[545000]
[546000]
[547000]
[548000]
[549000]
[550000]
[551000]
[552000]
[553000]
[554000]
[555000]
[556000]
[557000]
[558000]
[559000]
[560000]
[561000]
[562000]
[563000]
[564000]
[565000]
[566000]
[567000]
[568000]
[569000]
[570000]
[571000]
[572000]
[573000]
[574000]
[575000]
[576000]
[577000]
[578000]
[579000]
[580000]
[581000]
[582000]
[583000]
[584000]
[585000]
[586000]
[587000]
[588000]
[589000]
[590000]
[591000]
[592000]
[593000]
[594000]
[595000]
[596000]
[597000]
[598000]
[599000]
[600000]
[601000]
[602000]
[603000]
[604000]
[605000]
[606000]
[607000]
[608000]
[609000]
[610000]
[611000]
[612000]
[613000]
[614000]
[615000]
[616000]
[617000]
[618000]
[619000]
[620000]
[621000]
[622000]
[623000]
[624000]
[625000]
[626000]
[627000]
[628000]
[629000]
[630000]
[631000]
[632000]
[633000] -fusion SPANNING read extraction for scaff: PRUNE2--RFX3
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000]
[41000]
[42000]
[43000]
[44000]
[45000]
[46000]
[47000]
[48000]
[49000]
[50000]
[51000]
[52000]
[53000]
[54000]
[55000]
[56000]
[57000]
[58000]
[59000]
[60000]
[61000]
[62000]
[63000]
[64000]
[65000]
[66000]
[67000]
[68000]
[69000]
[70000]
[71000]
[72000]
[73000]
[74000]
[75000]
[76000]
[77000]
[78000]
[79000]
[80000]
[81000]
[82000]
[83000]
[84000]
[85000]
[86000]
[87000]
[88000]
[89000]
[90000]
[91000]
[92000]
[93000]
[94000]
[95000]
[96000]
[97000]
[98000]
[99000]
[100000]
[101000]
[102000]
[103000]
[104000]
[105000]
[106000]
[107000]
[108000]
[109000]
[110000]
[111000]
[112000]
[113000]
[114000]
[115000]
[116000]
[117000]
[118000]
[119000]
[120000]
[121000]
[122000]
[123000]
[124000]
[125000]
[126000]
[127000]
[128000]
[129000]
[130000]
[131000]
[132000]
[133000]
[134000]
[135000]
[136000]
[137000]
[138000]
[139000]
[140000]
[141000]
[142000]
[143000]
[144000]
[145000]
[146000]
[147000]
[148000]
[149000]
[150000]
[151000]
[152000]
[153000]
[154000]
[155000]
[156000]
[157000]
[158000]
[159000]
[160000]
[161000]
[162000]
[163000]
[164000]
[165000]
[166000]
[167000]
[168000]
[169000]
[170000]
[171000]
[172000]
[173000]
[174000]
[175000]
[176000]
[177000]
[178000]
[179000]
[180000] -fusion SPANNING read extraction for scaff: RBM14--RBM4
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000] -fusion SPANNING read extraction for scaff: RNF144B--PAFAH1B2P1
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000] -fusion SPANNING read extraction for scaff: RNF144B--RN7SL91P
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000]
[41000]
[42000]
[43000]
[44000]
[45000]
[46000]
[47000]
[48000]
[49000]
[50000]
[51000]
[52000]
[53000]
[54000]
[55000]
[56000]
[57000]
[58000]
[59000]
[60000]
[61000]
[62000]
[63000]
[64000]
[65000]
[66000]
[67000]
[68000]
[69000]
[70000]
[71000]
[72000]
[73000]
[74000]
[75000]
[76000]
[77000]
[78000]
[79000]
[80000]
[81000]
[82000]
[83000]
[84000]
[85000]
[86000]
[87000]
[88000]
[89000]
[90000]
[91000]
[92000]
[93000]
[94000]
[95000]
[96000]
[97000]
[98000]
[99000]
[100000]
[101000]
[102000]
[103000]
[104000]
[105000]
[106000]
[107000]
[108000]
[109000]
[110000]
[111000]
[112000]
[113000]
[114000]
[115000]
[116000]
[117000]
[118000]
[119000]
[120000]
[121000]
[122000]
[123000]
[124000]
[125000]
[126000]
[127000]
[128000]
[129000]
[130000]
[131000]
[132000]
[133000]
[134000]
[135000]
[136000]
[137000]
[138000]
[139000]
[140000]
[141000]
[142000]
[143000]
[144000]
[145000]
[146000]
[147000]
[148000]
[149000]
[150000]
[151000]
[152000]
[153000]
[154000]
[155000]
[156000]
[157000]
[158000]
[159000]
[160000]
[161000] -fusion SPANNING read extraction for scaff: SGMS1--BICC1
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000]
[41000]
[42000]
[43000]
[44000]
[45000]
[46000]
[47000]
[48000]
[49000]
[50000]
[51000]
[52000]
[53000]
[54000]
[55000]
[56000]
[57000]
[58000]
[59000]
[60000]
[61000]
[62000]
[63000]
[64000]
[65000]
[66000]
[67000]
[68000]
[69000]
[70000]
[71000] -fusion SPANNING read extraction for scaff: SLC12A7--AC092266.1
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000]
[41000]
[42000]
[43000]
[44000]
[45000]
[46000]
[47000]
[48000]
[49000]
[50000]
[51000]
[52000]
[53000]
[54000]
[55000]
[56000]
[57000]
[58000]
[59000]
[60000]
[61000]
[62000]
[63000]
[64000]
[65000]
[66000]
[67000]
[68000]
[69000]
[70000]
[71000] -fusion SPANNING read extraction for scaff: SLC12A7--LSINCT5
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000]
[41000]
[42000]
[43000]
[44000]
[45000]
[46000]
[47000]
[48000]
[49000]
[50000]
[51000]
[52000]
[53000]
[54000]
[55000]
[56000]
[57000]
[58000]
[59000]
[60000]
[61000]
[62000]
[63000]
[64000]
[65000]
[66000]
[67000]
[68000]
[69000]
[70000]
[71000]
[72000]
[73000]
[74000]
[75000]
[76000]
[77000]
[78000]
[79000]
[80000]
[81000]
[82000]
[83000]
[84000]
[85000]
[86000]
[87000]
[88000]
[89000]
[90000]
[91000]
[92000]
[93000]
[94000]
[95000]
[96000]
[97000]
[98000]
[99000]
[100000]
[101000]
[102000]
[103000]
[104000]
[105000]
[106000]
[107000]
[108000]
[109000]
[110000]
[111000]
[112000]
[113000]
[114000]
[115000]
[116000]
[117000]
[118000]
[119000]
[120000]
[121000]
[122000]
[123000]
[124000]
[125000]
[126000]
[127000]
[128000]
[129000]
[130000]
[131000]
[132000]
[133000]
[134000]
[135000]
[136000]
[137000]
[138000]
[139000]
[140000]
[141000]
[142000]
[143000]
[144000]
[145000]
[146000]
[147000]
[148000]
[149000]
[150000]
[151000]
[152000]
[153000]
[154000]
[155000]
[156000]
[157000]
[158000]
[159000]
[160000]
[161000]
[162000]
[163000]
[164000]
[165000]
[166000]
[167000]
[168000]
[169000]
[170000]
[171000]
[172000]
[173000]
[174000]
[175000]
[176000]
[177000]
[178000]
[179000]
[180000]
[181000]
[182000]
[183000]
[184000]
[185000]
[186000]
[187000]
[188000]
[189000]
[190000]
[191000]
[192000]
[193000]
[194000]
[195000]
[196000]
[197000]
[198000]
[199000]
[200000]
[201000]
[202000]
[203000]
[204000]
[205000]
[206000]
[207000]
[208000]
[209000]
[210000]
[211000]
[212000]
[213000]
[214000]
[215000]
[216000]
[217000]
[218000]
[219000]
[220000]
[221000]
[222000]
[223000]
[224000]
[225000]
[226000]
[227000]
[228000]
[229000]
[230000]
[231000]
[232000]
[233000]
[234000]
[235000]
[236000]
[237000]
[238000]
[239000]
[240000]
[241000]
[242000]
[243000]
[244000]
[245000]
[246000]
[247000]
[248000]
[249000]
[250000]
[251000]
[252000]
[253000]
[254000]
[255000]
[256000]
[257000]
[258000]
[259000]
[260000]
[261000]
[262000]
[263000]
[264000]
[265000]
[266000]
[267000]
[268000]
[269000]
[270000]
[271000]
[272000]
[273000]
[274000]
[275000]
[276000]
[277000]
[278000]
[279000]
[280000]
[281000]
[282000]
[283000]
[284000]
[285000]
[286000]
[287000]
[288000]
[289000]
[290000]
[291000]
[292000]
[293000]
[294000]
[295000]
[296000]
[297000]
[298000]
[299000]
[300000]
[301000]
[302000]
[303000]
[304000]
[305000]
[306000]
[307000]
[308000]
[309000]
[310000]
[311000]
[312000]
[313000]
[314000]
[315000]
[316000]
[317000]
[318000]
[319000]
[320000]
[321000]
[322000]
[323000]
[324000]
[325000]
[326000]
[327000]
[328000]
[329000]
[330000]
[331000]
[332000]
[333000]
[334000]
[335000]
[336000]
[337000]
[338000]
[339000]
[340000]
[341000]
[342000]
[343000]
[344000]
[345000]
[346000]
[347000]
[348000]
[349000]
[350000]
[351000]
[352000]
[353000]
[354000]
[355000]
[356000]
[357000]
[358000]
[359000]
[360000]
[361000]
[362000]
[363000]
[364000]
[365000]
[366000]
[367000]
[368000]
[369000]
[370000]
[371000]
[372000]
[373000]
[374000]
[375000]
[376000]
[377000]
[378000]
[379000]
[380000]
[381000]
[382000]
[383000]
[384000]
[385000]
[386000]
[387000]
[388000]
[389000]
[390000]
[391000]
[392000]
[393000]
[394000]
[395000]
[396000]
[397000]
[398000]
[399000]
[400000]
[401000]
[402000]
[403000]
[404000]
[405000]
[406000]
[407000]
[408000]
[409000]
[410000]
[411000]
[412000]
[413000]
[414000]
[415000]
[416000]
[417000]
[418000]
[419000]
[420000]
[421000]
[422000]
[423000]
[424000]
[425000]
[426000]
[427000]
[428000]
[429000]
[430000]
[431000]
[432000]
[433000]
[434000]
[435000]
[436000]
[437000]
[438000]
[439000]
[440000]
[441000]
[442000]
[443000]
[444000]
[445000]
[446000]
[447000]
[448000]
[449000]
[450000]
[451000]
[452000]
[453000]
[454000]
[455000]
[456000]
[457000]
[458000]
[459000]
[460000]
[461000]
[462000]
[463000]
[464000]
[465000]
[466000]
[467000]
[468000]
[469000]
[470000]
[471000]
[472000]
[473000]
[474000]
[475000]
[476000]
[477000]
[478000]
[479000]
[480000]
[481000]
[482000]
[483000]
[484000]
[485000]
[486000]
[487000]
[488000]
[489000]
[490000]
[491000]
[492000]
[493000]
[494000]
[495000]
[496000]
[497000]
[498000]
[499000]
[500000]
[501000]
[502000]
[503000]
[504000]
[505000]
[506000]
[507000]
[508000]
[509000]
[510000]
[511000]
[512000]
[513000]
[514000]
[515000]
[516000]
[517000]
[518000]
[519000]
[520000]
[521000]
[522000]
[523000]
[524000]
[525000]
[526000]
[527000]
[528000]
[529000]
[530000]
[531000]
[532000]
[533000]
[534000]
[535000]
[536000]
[537000]
[538000]
[539000]
[540000]
[541000]
[542000]
[543000]
[544000]
[545000]
[546000]
[547000]
[548000]
[549000]
[550000]
[551000]
[552000]
[553000]
[554000]
[555000]
[556000]
[557000]
[558000]
[559000]
[560000]
[561000]
[562000]
[563000]
[564000]
[565000]
[566000]
[567000]
[568000]
[569000]
[570000]
[571000]
[572000]
[573000]
[574000] -fusion SPANNING read extraction for scaff: SLC45A2--AMACR
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000]
[41000]
[42000]
[43000]
[44000]
[45000]
[46000]
[47000]
[48000]
[49000]
[50000]
[51000]
[52000]
[53000]
[54000]
[55000]
[56000]
[57000]
[58000]
[59000]
[60000]
[61000]
[62000]
[63000]
[64000]
[65000]
[66000]
[67000]
[68000]
[69000]
[70000]
[71000]
[72000]
[73000]
[74000]
[75000]
[76000]
[77000]
[78000]
[79000]
[80000]
[81000]
[82000]
[83000]
[84000]
[85000]
[86000]
[87000]
[88000]
[89000]
[90000]
[91000]
[92000]
[93000]
[94000]
[95000]
[96000]
[97000]
[98000]
[99000]
[100000]
[101000]
[102000]
[103000]
[104000]
[105000]
[106000]
[107000]
[108000]
[109000]
[110000]
[111000]
[112000]
[113000]
[114000]
[115000]
[116000]
[117000]
[118000]
[119000]
[120000]
[121000]
[122000]
[123000]
[124000]
[125000]
[126000]
[127000]
[128000]
[129000]
[130000]
[131000]
[132000]
[133000]
[134000]
[135000]
[136000]
[137000]
[138000]
[139000]
[140000]
[141000]
[142000]
[143000]
[144000]
[145000]
[146000]
[147000]
[148000]
[149000]
[150000]
[151000]
[152000]
[153000]
[154000]
[155000]
[156000]
[157000]
[158000]
[159000]
[160000]
[161000]
[162000]
[163000]
[164000]
[165000]
[166000]
[167000]
[168000]
[169000]
[170000]
[171000]
[172000]
[173000]
[174000]
[175000]
[176000]
[177000]
[178000]
[179000]
[180000]
[181000]
[182000]
[183000]
[184000]
[185000]
[186000]
[187000]
[188000]
[189000]
[190000] -fusion SPANNING read extraction for scaff: SNF8--ASTN2
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000]
[41000]
[42000]
[43000]
[44000]
[45000]
[46000]
[47000]
[48000]
[49000]
[50000]
[51000]
[52000]
[53000]
[54000]
[55000]
[56000]
[57000]
[58000] -fusion SPANNING read extraction for scaff: STX16--NPEPL1
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000]
[41000]
[42000]
[43000]
[44000]
[45000]
[46000]
[47000]
[48000]
[49000]
[50000]
[51000]
[52000]
[53000]
[54000]
[55000]
[56000]
[57000]
[58000]
[59000]
[60000]
[61000]
[62000]
[63000]
[64000]
[65000]
[66000]
[67000]
[68000]
[69000] -fusion SPANNING read extraction for scaff: SUGCT--DDC
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000] -fusion SPANNING read extraction for scaff: TEX48--DNAJC16
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000] -fusion SPANNING read extraction for scaff: TLK2--AC240565.1
[1000]
[2000]
[3000]
[4000]
[5000]
[6000] -fusion SPANNING read extraction for scaff: TLK2P1--AC110079.1
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000] -fusion SPANNING read extraction for scaff: TMED7--TICAM2
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000]
[41000]
[42000]
[43000]
[44000]
[45000]
[46000]
[47000]
[48000]
[49000]
[50000]
[51000]
[52000]
[53000]
[54000]
[55000]
[56000]
[57000]
[58000]
[59000]
[60000]
[61000]
[62000]
[63000]
[64000]
[65000]
[66000]
[67000]
[68000]
[69000]
[70000]
[71000]
[72000]
[73000]
[74000]
[75000]
[76000]
[77000]
[78000]
[79000]
[80000]
[81000]
[82000]
[83000]
[84000]
[85000]
[86000]
[87000]
[88000]
[89000]
[90000]
[91000]
[92000]
[93000]
[94000]
[95000]
[96000]
[97000]
[98000]
[99000]
[100000]
[101000]
[102000]
[103000]
[104000]
[105000]
[106000]
[107000]
[108000]
[109000]
[110000]
[111000]
[112000]
[113000]
[114000]
[115000]
[116000]
[117000]
[118000]
[119000]
[120000]
[121000]
[122000]
[123000]
[124000]
[125000]
[126000]
[127000]
[128000]
[129000]
[130000]
[131000]
[132000]
[133000]
[134000]
[135000]
[136000]
[137000]
[138000]
[139000]
[140000]
[141000]
[142000]
[143000]
[144000]
[145000]
[146000]
[147000]
[148000]
[149000]
[150000]
[151000]
[152000]
[153000]
[154000]
[155000]
[156000]
[157000]
[158000]
[159000]
[160000]
[161000]
[162000]
[163000]
[164000]
[165000]
[166000]
[167000]
[168000]
[169000]
[170000]
[171000]
[172000]
[173000]
[174000]
[175000]
[176000]
[177000]
[178000]
[179000]
[180000]
[181000]
[182000]
[183000]
[184000]
[185000]
[186000]
[187000]
[188000]
[189000]
[190000]
[191000]
[192000]
[193000]
[194000]
[195000]
[196000]
[197000]
[198000]
[199000]
[200000]
[201000]
[202000]
[203000]
[204000]
[205000]
[206000]
[207000]
[208000]
[209000]
[210000]
[211000]
[212000]
[213000]
[214000]
[215000]
[216000]
[217000]
[218000]
[219000]
[220000]
[221000]
[222000]
[223000]
[224000]
[225000]
[226000]
[227000]
[228000]
[229000]
[230000]
[231000]
[232000]
[233000]
[234000]
[235000]
[236000]
[237000]
[238000]
[239000]
[240000]
[241000]
[242000]
[243000]
[244000]
[245000]
[246000]
[247000]
[248000]
[249000]
[250000]
[251000]
[252000]
[253000]
[254000]
[255000]
[256000]
[257000]
[258000]
[259000]
[260000]
[261000]
[262000]
[263000]
[264000]
[265000]
[266000]
[267000]
[268000]
[269000]
[270000]
[271000]
[272000]
[273000]
[274000]
[275000]
[276000]
[277000]
[278000]
[279000]
[280000]
[281000]
[282000]
[283000]
[284000]
[285000]
[286000]
[287000]
[288000]
[289000]
[290000]
[291000]
[292000]
[293000]
[294000]
[295000]
[296000]
[297000]
[298000]
[299000]
[300000]
[301000]
[302000]
[303000]
[304000]
[305000]
[306000]
[307000]
[308000]
[309000]
[310000]
[311000]
[312000]
[313000]
[314000]
[315000]
[316000]
[317000]
[318000]
[319000]
[320000]
[321000]
[322000]
[323000]
[324000]
[325000]
[326000]
[327000]
[328000]
[329000]
[330000]
[331000]
[332000]
[333000]
[334000]
[335000]
[336000]
[337000]
[338000]
[339000]
[340000]
[341000]
[342000]
[343000]
[344000]
[345000]
[346000]
[347000]
[348000]
[349000]
[350000]
[351000]
[352000]
[353000]
[354000]
[355000]
[356000]
[357000]
[358000]
[359000]
[360000]
[361000]
[362000]
[363000]
[364000]
[365000]
[366000]
[367000]
[368000]
[369000]
[370000]
[371000]
[372000]
[373000]
[374000]
[375000]
[376000]
[377000]
[378000]
[379000]
[380000]
[381000]
[382000]
[383000]
[384000]
[385000]
[386000]
[387000]
[388000]
[389000]
[390000]
[391000]
[392000]
[393000]
[394000]
[395000]
[396000]
[397000]
[398000]
[399000]
[400000]
[401000]
[402000]
[403000]
[404000]
[405000]
[406000]
[407000]
[408000]
[409000]
[410000]
[411000]
[412000]
[413000]
[414000]
[415000]
[416000]
[417000]
[418000]
[419000]
[420000]
[421000]
[422000]
[423000]
[424000]
[425000]
[426000]
[427000]
[428000]
[429000]
[430000]
[431000]
[432000]
[433000]
[434000]
[435000]
[436000]
[437000]
[438000]
[439000]
[440000]
[441000]
[442000]
[443000]
[444000]
[445000]
[446000]
[447000]
[448000]
[449000]
[450000]
[451000]
[452000]
[453000]
[454000]
[455000]
[456000]
[457000]
[458000]
[459000]
[460000]
[461000]
[462000]
[463000]
[464000]
[465000]
[466000]
[467000]
[468000]
[469000]
[470000]
[471000]
[472000]
[473000]
[474000]
[475000]
[476000]
[477000]
[478000]
[479000]
[480000]
[481000]
[482000]
[483000]
[484000]
[485000]
[486000]
[487000]
[488000]
[489000]
[490000]
[491000]
[492000]
[493000]
[494000]
[495000]
[496000]
[497000]
[498000]
[499000]
[500000]
[501000]
[502000]
[503000]
[504000]
[505000]
[506000]
[507000]
[508000]
[509000]
[510000]
[511000]
[512000]
[513000]
[514000]
[515000]
[516000]
[517000]
[518000]
[519000]
[520000]
[521000]
[522000]
[523000]
[524000]
[525000]
[526000]
[527000]
[528000]
[529000]
[530000]
[531000]
[532000]
[533000]
[534000]
[535000]
[536000]
[537000]
[538000]
[539000]
[540000]
[541000]
[542000]
[543000]
[544000]
[545000]
[546000]
[547000]
[548000]
[549000]
[550000]
[551000]
[552000]
[553000]
[554000]
[555000]
[556000]
[557000]
[558000]
[559000]
[560000]
[561000]
[562000]
[563000]
[564000]
[565000]
[566000]
[567000]
[568000]
[569000]
[570000]
[571000]
[572000]
[573000]
[574000]
[575000]
[576000]
[577000]
[578000]
[579000]
[580000]
[581000]
[582000]
[583000]
[584000]
[585000]
[586000]
[587000]
[588000]
[589000]
[590000]
[591000]
[592000]
[593000]
[594000]
[595000]
[596000]
[597000]
[598000]
[599000]
[600000]
[601000]
[602000]
[603000]
[604000]
[605000]
[606000]
[607000]
[608000]
[609000]
[610000]
[611000]
[612000]
[613000]
[614000]
[615000]
[616000]
[617000]
[618000]
[619000]
[620000]
[621000]
[622000]
[623000]
[624000]
[625000]
[626000]
[627000]
[628000]
[629000]
[630000]
[631000]
[632000]
[633000]
[634000]
[635000]
[636000]
[637000]
[638000]
[639000]
[640000]
[641000]
[642000]
[643000]
[644000]
[645000]
[646000]
[647000]
[648000]
[649000]
[650000]
[651000]
[652000]
[653000]
[654000]
[655000]
[656000]
[657000]
[658000]
[659000]
[660000]
[661000]
[662000]
[663000]
[664000]
[665000]
[666000]
[667000]
[668000]
[669000]
[670000]
[671000]
[672000]
[673000]
[674000]
[675000]
[676000]
[677000]
[678000]
[679000]
[680000]
[681000]
[682000]
[683000]
[684000]
[685000]
[686000]
[687000]
[688000]
[689000]
[690000]
[691000]
[692000]
[693000]
[694000]
[695000]
[696000]
[697000]
[698000]
[699000]
[700000]
[701000]
[702000]
[703000]
[704000]
[705000]
[706000]
[707000]
[708000]
[709000]
[710000]
[711000]
[712000]
[713000]
[714000]
[715000]
[716000]
[717000]
[718000]
[719000]
[720000]
[721000]
[722000]
[723000]
[724000]
[725000]
[726000]
[727000]
[728000]
[729000]
[730000]
[731000]
[732000]
[733000]
[734000]
[735000]
[736000]
[737000]
[738000]
[739000]
[740000]
[741000]
[742000]
[743000]
[744000]
[745000]
[746000]
[747000]
[748000]
[749000]
[750000]
[751000]
[752000]
[753000]
[754000]
[755000]
[756000]
[757000]
[758000]
[759000]
[760000]
[761000]
[762000]
[763000]
[764000]
[765000]
[766000]
[767000]
[768000]
[769000]
[770000]
[771000]
[772000]
[773000]
[774000]
[775000]
[776000]
[777000]
[778000]
[779000]
[780000]
[781000]
[782000]
[783000]
[784000]
[785000]
[786000]
[787000]
[788000]
[789000]
[790000]
[791000]
[792000]
[793000]
[794000]
[795000]
[796000]
[797000]
[798000]
[799000]
[800000]
[801000]
[802000]
[803000]
[804000]
[805000]
[806000]
[807000]
[808000]
[809000]
[810000]
[811000]
[812000]
[813000]
[814000]
[815000]
[816000]
[817000]
[818000]
[819000]
[820000]
[821000]
[822000]
[823000]
[824000]
[825000]
[826000]
[827000]
[828000]
[829000]
[830000]
[831000]
[832000]
[833000]
[834000]
[835000]
[836000]
[837000]
[838000]
[839000]
[840000]
[841000]
[842000]
[843000]
[844000]
[845000]
[846000]
[847000]
[848000]
[849000]
[850000]
[851000]
[852000]
[853000]
[854000]
[855000]
[856000]
[857000]
[858000]
[859000]
[860000]
[861000]
[862000]
[863000]
[864000]
[865000]
[866000]
[867000]
[868000]
[869000]
[870000]
[871000]
[872000]
[873000]
[874000]
[875000]
[876000]
[877000]
[878000]
[879000]
[880000]
[881000]
[882000]
[883000]
[884000]
[885000]
[886000]
[887000]
[888000]
[889000]
[890000]
[891000]
[892000]
[893000]
[894000]
[895000]
[896000]
[897000]
[898000]
[899000]
[900000]
[901000]
[902000]
[903000]
[904000]
[905000]
[906000]
[907000]
[908000]
[909000]
[910000]
[911000]
[912000]
[913000]
[914000]
[915000]
[916000]
[917000]
[918000]
[919000]
[920000]
[921000]
[922000]
[923000]
[924000]
[925000]
[926000]
[927000]
[928000]
[929000]
[930000]
[931000]
[932000]
[933000]
[934000]
[935000]
[936000]
[937000]
[938000]
[939000]
[940000]
[941000]
[942000]
[943000]
[944000]
[945000]
[946000]
[947000]
[948000]
[949000]
[950000]
[951000]
[952000]
[953000]
[954000]
[955000]
[956000]
[957000]
[958000]
[959000]
[960000]
[961000]
[962000]
[963000]
[964000]
[965000]
[966000]
[967000]
[968000]
[969000]
[970000]
[971000]
[972000]
[973000]
[974000]
[975000]
[976000]
[977000]
[978000]
[979000]
[980000]
[981000]
[982000]
[983000]
[984000]
[985000]
[986000]
[987000]
[988000]
[989000]
[990000]
[991000]
[992000]
[993000]
[994000]
[995000]
[996000]
[997000]
[998000]
[999000]
[1000000]
[1001000]
[1002000]
[1003000]
[1004000]
[1005000]
[1006000]
[1007000]
[1008000]
[1009000]
[1010000]
[1011000]
[1012000]
[1013000]
[1014000]
[1015000]
[1016000]
[1017000]
[1018000]
[1019000]
[1020000]
[1021000]
[1022000]
[1023000]
[1024000]
[1025000]
[1026000]
[1027000]
[1028000]
[1029000]
[1030000]
[1031000]
[1032000]
[1033000]
[1034000]
[1035000]
[1036000]
[1037000]
[1038000]
[1039000]
[1040000]
[1041000]
[1042000]
[1043000]
[1044000]
[1045000]
[1046000]
[1047000]
[1048000]
[1049000]
[1050000]
[1051000]
[1052000]
[1053000]
[1054000]
[1055000]
[1056000]
[1057000]
[1058000]
[1059000]
[1060000]
[1061000]
[1062000]
[1063000]
[1064000]
[1065000]
[1066000]
[1067000]
[1068000]
[1069000]
[1070000]
[1071000]
[1072000]
[1073000]
[1074000]
[1075000]
[1076000]
[1077000]
[1078000]
[1079000]
[1080000]
[1081000]
[1082000]
[1083000]
[1084000]
[1085000]
[1086000]
[1087000]
[1088000]
[1089000]
[1090000]
[1091000]
[1092000]
[1093000]
[1094000]
[1095000]
[1096000]
[1097000]
[1098000]
[1099000]
[1100000]
[1101000]
[1102000]
[1103000]
[1104000]
[1105000]
[1106000]
[1107000]
[1108000]
[1109000]
[1110000]
[1111000]
[1112000]
[1113000]
[1114000]
[1115000]
[1116000]
[1117000]
[1118000]
[1119000]
[1120000]
[1121000]
[1122000]
[1123000]
[1124000]
[1125000]
[1126000]
[1127000]
[1128000]
[1129000]
[1130000]
[1131000]
[1132000]
[1133000]
[1134000]
[1135000]
[1136000]
[1137000]
[1138000]
[1139000]
[1140000]
[1141000]
[1142000]
[1143000]
[1144000]
[1145000]
[1146000]
[1147000]
[1148000]
[1149000]
[1150000]
[1151000]
[1152000]
[1153000]
[1154000]
[1155000]
[1156000]
[1157000]
[1158000]
[1159000]
[1160000]
[1161000]
[1162000]
[1163000]
[1164000]
[1165000]
[1166000]
[1167000]
[1168000]
[1169000]
[1170000]
[1171000]
[1172000]
[1173000]
[1174000]
[1175000]
[1176000]
[1177000]
[1178000]
[1179000]
[1180000]
[1181000]
[1182000]
[1183000]
[1184000]
[1185000]
[1186000]
[1187000]
[1188000]
[1189000]
[1190000]
[1191000]
[1192000]
[1193000]
[1194000]
[1195000]
[1196000]
[1197000]
[1198000]
[1199000]
[1200000]
[1201000]
[1202000]
[1203000]
[1204000]
[1205000]
[1206000]
[1207000]
[1208000]
[1209000]
[1210000]
[1211000]
[1212000]
[1213000]
[1214000]
[1215000]
[1216000]
[1217000]
[1218000]
[1219000]
[1220000]
[1221000]
[1222000]
[1223000]
[1224000]
[1225000]
[1226000]
[1227000]
[1228000]
[1229000]
[1230000]
[1231000]
[1232000]
[1233000]
[1234000]
[1235000]
[1236000]
[1237000]
[1238000]
[1239000]
[1240000]
[1241000]
[1242000]
[1243000]
[1244000]
[1245000]
[1246000]
[1247000]
[1248000]
[1249000]
[1250000]
[1251000]
[1252000]
[1253000]
[1254000]
[1255000]
[1256000]
[1257000]
[1258000]
[1259000]
[1260000]
[1261000]
[1262000]
[1263000]
[1264000]
[1265000]
[1266000]
[1267000]
[1268000] -fusion SPANNING read extraction for scaff: TMPRSS2--ERG
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000] -fusion SPANNING read extraction for scaff: TVP23C--CDRT4
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000]
[41000]
[42000]
[43000]
[44000]
[45000]
[46000]
[47000]
[48000]
[49000]
[50000]
[51000]
[52000]
[53000]
[54000]
[55000]
[56000]
[57000]
[58000]
[59000]
[60000]
[61000]
[62000]
[63000]
[64000]
[65000]
[66000]
[67000]
[68000]
[69000]
[70000]
[71000]
[72000]
[73000]
[74000]
[75000]
[76000]
[77000]
[78000]
[79000]
[80000]
[81000]
[82000]
[83000]
[84000]
[85000]
[86000]
[87000]
[88000]
[89000]
[90000]
[91000]
[92000]
[93000]
[94000]
[95000]
[96000]
[97000]
[98000]
[99000]
[100000]
[101000]
[102000] -fusion SPANNING read extraction for scaff: U2AF2--ZNF627
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000] -fusion SPANNING read extraction for scaff: VAMP3--PIK3CD
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000]
[41000]
[42000]
[43000]
[44000]
[45000]
[46000]
[47000]
[48000] -fusion SPANNING read extraction for scaff: ZNF33B--WDFY4
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000] -fusion SPANNING read extraction for scaff: ZNF627--ZNF385C
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000]
[41000]
[42000]
[43000]
[44000]
[45000]
[46000]
[47000]
[48000]
[49000]
[50000]
[51000]
[52000] -fusion SPANNING read extraction for scaff: ZSWIM6--PDE4D
-filtered reads reasons: $VAR1 = {
'seq similar region alignment' => 160319,
'lacks exon overlap' => 65454
};
Execution Time = 14.31 minutes. CMD: /usr/local/src/STAR-Fusion/FusionInspector/util/get_fusion_SPANNING_reads_from_bam.from_chim_summary.pl --gtf_file /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.gtf --MIN_ALIGN_PER_ID 96 --bam /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.star.cSorted.dupsMarked.bam --junction_info /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.star.cSorted.dupsMarked.bam.fusion_junction_info --genome_lib_dir ctat_genome_lib_build_dir > /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.star.cSorted.dupsMarked.bam.fusion_span_reads.sam
Running: touch /tmp/nxf.97TVOzPwtG/chckpts_dir/get_fusion_SPANNING_reads_from_bam.ok
Running: /usr/local/src/STAR-Fusion/FusionInspector/util/coalesce_junction_and_spanning_info.pl /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.star.cSorted.dupsMarked.bam.fusion_junction_info /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.star.cSorted.dupsMarked.bam.fusion_spanning_info 1 > /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.fusion_preds.coalesced.summary
Execution Time = 0.02 minutes. CMD: /usr/local/src/STAR-Fusion/FusionInspector/util/coalesce_junction_and_spanning_info.pl /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.star.cSorted.dupsMarked.bam.fusion_junction_info /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.star.cSorted.dupsMarked.bam.fusion_spanning_info 1 > /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.fusion_preds.coalesced.summary
Running: touch /tmp/nxf.97TVOzPwtG/chckpts_dir/coalesce_junc_n_span.ok
Running: /usr/local/src/STAR-Fusion/FusionInspector/util/fusion_EM_runner.pl /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.fusion_preds.coalesced.summary > /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.fusion_preds.coalesced.summary.EMadj
EM: Starting log likelihood: -120287.062032
EM: Round [1] log likelihood: -120019.124447
EM: Round [2] log likelihood: -120007.486378
EM: Round [3] log likelihood: -119999.082788
EM: Round [4] log likelihood: -119992.306010
EM: Round [5] log likelihood: -119986.747139
EM: Round [6] log likelihood: -119982.124193
EM: Round [7] log likelihood: -119978.234016
EM: Round [8] log likelihood: -119974.926707
EM: Round [9] log likelihood: -119972.089320
EM: Round [10] log likelihood: -119969.635168
EM: Round [11] log likelihood: -119967.496642
EM: Round [12] log likelihood: -119965.620290
EM: Round [13] log likelihood: -119963.963356
EM: Round [14] log likelihood: -119962.491305
EM: Round [15] log likelihood: -119961.176014
EM: Round [16] log likelihood: -119959.994413
EM: Round [17] log likelihood: -119958.927460
EM: Round [18] log likelihood: -119957.959355
EM: Round [19] log likelihood: -119957.076914
EM: Round [20] log likelihood: -119956.269087
EM: Round [21] log likelihood: -119955.526570
EM: Round [22] log likelihood: -119954.841494
EM: Round [23] log likelihood: -119954.207176
EM: Round [24] log likelihood: -119953.617911
EM: Round [25] log likelihood: -119953.068816
EM: Round [26] log likelihood: -119952.555688
EM: Round [27] log likelihood: -119952.074895
EM: Round [28] log likelihood: -119951.623288
EM: Round [29] log likelihood: -119951.198122
EM: Round [30] log likelihood: -119950.796999
EM: Round [31] log likelihood: -119950.417809
EM: Round [32] log likelihood: -119950.058697
EM: Round [33] log likelihood: -119949.718019
EM: Round [34] log likelihood: -119949.394314
EM: Round [35] log likelihood: -119949.086281
EM: Round [36] log likelihood: -119948.792758
EM: Round [37] log likelihood: -119948.512699
EM: Round [38] log likelihood: -119948.245165
EM: Round [39] log likelihood: -119947.989306
EM: Round [40] log likelihood: -119947.744353
EM: Round [41] log likelihood: -119947.509609
EM: Round [42] log likelihood: -119947.284435
EM: Round [43] log likelihood: -119947.068252
EM: Round [44] log likelihood: -119946.860527
EM: Round [45] log likelihood: -119946.660771
EM: Round [46] log likelihood: -119946.468536
EM: Round [47] log likelihood: -119946.283407
EM: Round [48] log likelihood: -119946.105001
EM: Round [49] log likelihood: -119945.932965
EM: Round [50] log likelihood: -119945.766969
EM: Round [51] log likelihood: -119945.606708
EM: Round [52] log likelihood: -119945.451898
EM: Round [53] log likelihood: -119945.302273
EM: Round [54] log likelihood: -119945.157587
EM: Round [55] log likelihood: -119945.017608
EM: Round [56] log likelihood: -119944.882119
EM: Round [57] log likelihood: -119944.750916
EM: Round [58] log likelihood: -119944.623808
EM: Round [59] log likelihood: -119944.500616
EM: Round [60] log likelihood: -119944.381170
EM: Round [61] log likelihood: -119944.265311
EM: Round [62] log likelihood: -119944.152889
EM: Round [63] log likelihood: -119944.043760
EM: Round [64] log likelihood: -119943.937791
EM: Round [65] log likelihood: -119943.834855
EM: Round [66] log likelihood: -119943.734829
EM: Round [67] log likelihood: -119943.637602
EM: Round [68] log likelihood: -119943.543062
EM: Round [69] log likelihood: -119943.451108
EM: Round [70] log likelihood: -119943.361642
EM: Round [71] log likelihood: -119943.274569
EM: Round [72] log likelihood: -119943.189802
EM: Round [73] log likelihood: -119943.107255
EM: Round [74] log likelihood: -119943.026848
EM: Round [75] log likelihood: -119942.948504
EM: Round [76] log likelihood: -119942.872150
EM: Round [77] log likelihood: -119942.797715
EM: Round [78] log likelihood: -119942.725132
EM: Round [79] log likelihood: -119942.654338
EM: Round [80] log likelihood: -119942.585270
EM: Round [81] log likelihood: -119942.517871
EM: Round [82] log likelihood: -119942.452083
EM: Round [83] log likelihood: -119942.387853
EM: Round [84] log likelihood: -119942.325130
EM: Round [85] log likelihood: -119942.263864
EM: Round [86] log likelihood: -119942.204007
EM: Round [87] log likelihood: -119942.145514
EM: Round [88] log likelihood: -119942.088342
EM: Round [89] log likelihood: -119942.032447
EM: Round [90] log likelihood: -119941.977790
EM: Round [91] log likelihood: -119941.924332
EM: Round [92] log likelihood: -119941.872036
EM: Round [93] log likelihood: -119941.820865
EM: Round [94] log likelihood: -119941.770786
EM: Round [95] log likelihood: -119941.721765
EM: Round [96] log likelihood: -119941.673769
EM: Round [97] log likelihood: -119941.626769
EM: Round [98] log likelihood: -119941.580735
EM: Round [99] log likelihood: -119941.535637
EM: Round [100] log likelihood: -119941.491449
EM: Round [101] log likelihood: -119941.448144
EM: Round [102] log likelihood: -119941.405696
EM: Round [103] log likelihood: -119941.364081
EM: Round [104] log likelihood: -119941.323274
EM: Round [105] log likelihood: -119941.283253
EM: Round [106] log likelihood: -119941.243996
EM: Round [107] log likelihood: -119941.205481
EM: Round [108] log likelihood: -119941.167687
EM: Round [109] log likelihood: -119941.130595
EM: Round [110] log likelihood: -119941.094185
EM: Round [111] log likelihood: -119941.058438
EM: Round [112] log likelihood: -119941.023337
EM: Round [113] log likelihood: -119940.988864
EM: Round [114] log likelihood: -119940.955002
EM: Round [115] log likelihood: -119940.921735
EM: Round [116] log likelihood: -119940.889047
EM: Round [117] log likelihood: -119940.856922
EM: Round [118] log likelihood: -119940.825348
EM: Round [119] log likelihood: -119940.794307
EM: Round [120] log likelihood: -119940.763788
EM: Round [121] log likelihood: -119940.733777
EM: Round [122] log likelihood: -119940.704260
EM: Round [123] log likelihood: -119940.675226
EM: Round [124] log likelihood: -119940.646661
EM: Round [125] log likelihood: -119940.618555
EM: Round [126] log likelihood: -119940.590896
EM: Round [127] log likelihood: -119940.563672
EM: Round [128] log likelihood: -119940.536874
EM: Round [129] log likelihood: -119940.510490
EM: Round [130] log likelihood: -119940.484511
EM: Round [131] log likelihood: -119940.458927
EM: Round [132] log likelihood: -119940.433728
EM: Round [133] log likelihood: -119940.408906
EM: Round [134] log likelihood: -119940.384451
EM: Round [135] log likelihood: -119940.360355
EM: Round [136] log likelihood: -119940.336609
EM: Round [137] log likelihood: -119940.313206
EM: Round [138] log likelihood: -119940.290136
EM: Round [139] log likelihood: -119940.267394
EM: Round [140] log likelihood: -119940.244970
EM: Round [141] log likelihood: -119940.222859
EM: Round [142] log likelihood: -119940.201053
EM: Round [143] log likelihood: -119940.179545
EM: Round [144] log likelihood: -119940.158328
EM: Round [145] log likelihood: -119940.137397
EM: Round [146] log likelihood: -119940.116745
EM: Round [147] log likelihood: -119940.096366
EM: Round [148] log likelihood: -119940.076253
EM: Round [149] log likelihood: -119940.056402
EM: Round [150] log likelihood: -119940.036806
EM: Round [151] log likelihood: -119940.017461
EM: Round [152] log likelihood: -119939.998361
EM: Round [153] log likelihood: -119939.979500
EM: Round [154] log likelihood: -119939.960875
EM: Round [155] log likelihood: -119939.942479
EM: Round [156] log likelihood: -119939.924309
EM: Round [157] log likelihood: -119939.906359
EM: Round [158] log likelihood: -119939.888626
EM: Round [159] log likelihood: -119939.871105
EM: Round [160] log likelihood: -119939.853791
EM: Round [161] log likelihood: -119939.836681
EM: Round [162] log likelihood: -119939.819771
EM: Round [163] log likelihood: -119939.803056
EM: Round [164] log likelihood: -119939.786533
EM: Round [165] log likelihood: -119939.770198
EM: Round [166] log likelihood: -119939.754048
EM: Round [167] log likelihood: -119939.738079
EM: Round [168] log likelihood: -119939.722288
EM: Round [169] log likelihood: -119939.706671
EM: Round [170] log likelihood: -119939.691225
EM: Round [171] log likelihood: -119939.675947
EM: Round [172] log likelihood: -119939.660834
EM: Round [173] log likelihood: -119939.645882
EM: Round [174] log likelihood: -119939.631090
EM: Round [175] log likelihood: -119939.616454
EM: Round [176] log likelihood: -119939.601970
EM: Round [177] log likelihood: -119939.587638
EM: Round [178] log likelihood: -119939.573453
EM: Round [179] log likelihood: -119939.559414
EM: Round [180] log likelihood: -119939.545517
EM: Round [181] log likelihood: -119939.531761
EM: Round [182] log likelihood: -119939.518142
EM: Round [183] log likelihood: -119939.504659
EM: Round [184] log likelihood: -119939.491310
EM: Round [185] log likelihood: -119939.478091
EM: Round [186] log likelihood: -119939.465002
EM: Round [187] log likelihood: -119939.452039
EM: Round [188] log likelihood: -119939.439201
EM: Round [189] log likelihood: -119939.426485
EM: Round [190] log likelihood: -119939.413890
EM: Round [191] log likelihood: -119939.401414
EM: Round [192] log likelihood: -119939.389055
EM: Round [193] log likelihood: -119939.376811
EM: Round [194] log likelihood: -119939.364680
EM: Round [195] log likelihood: -119939.352660
EM: Round [196] log likelihood: -119939.340750
EM: Round [197] log likelihood: -119939.328948
EM: Round [198] log likelihood: -119939.317253
EM: Round [199] log likelihood: -119939.305662
EM: Round [200] log likelihood: -119939.294174
EM: Round [201] log likelihood: -119939.282788
EM: Round [202] log likelihood: -119939.271502
EM: Round [203] log likelihood: -119939.260315
EM: Round [204] log likelihood: -119939.249225
EM: Round [205] log likelihood: -119939.238231
EM: Round [206] log likelihood: -119939.227331
EM: Round [207] log likelihood: -119939.216524
EM: Round [208] log likelihood: -119939.205809
EM: Round [209] log likelihood: -119939.195185
EM: Round [210] log likelihood: -119939.184650
EM: Round [211] log likelihood: -119939.174202
EM: Round [212] log likelihood: -119939.163842
EM: Round [213] log likelihood: -119939.153567
EM: Round [214] log likelihood: -119939.143376
EM: Round [215] log likelihood: -119939.133269
EM: Round [216] log likelihood: -119939.123244
EM: Round [217] log likelihood: -119939.113300
EM: Round [218] log likelihood: -119939.103436
EM: Round [219] log likelihood: -119939.093650
EM: Round [220] log likelihood: -119939.083943
EM: Round [221] log likelihood: -119939.074313
EM: Round [222] log likelihood: -119939.064758
EM: Round [223] log likelihood: -119939.055278
EM: Round [224] log likelihood: -119939.045873
EM: Round [225] log likelihood: -119939.036540
EM: Round [226] log likelihood: -119939.027280
EM: Round [227] log likelihood: -119939.018091
EM: Round [228] log likelihood: -119939.008972
EM: Round [229] log likelihood: -119938.999922
EM: Round [230] log likelihood: -119938.990942
EM: Round [231] log likelihood: -119938.982029
EM: Round [232] log likelihood: -119938.973183
EM: Round [233] log likelihood: -119938.964403
EM: Round [234] log likelihood: -119938.955689
EM: Round [235] log likelihood: -119938.947040
EM: Round [236] log likelihood: -119938.938454
EM: Round [237] log likelihood: -119938.929932
EM: Round [238] log likelihood: -119938.921472
EM: Round [239] log likelihood: -119938.913073
EM: Round [240] log likelihood: -119938.904736
EM: Round [241] log likelihood: -119938.896459
EM: Round [242] log likelihood: -119938.888242
EM: Round [243] log likelihood: -119938.880084
EM: Round [244] log likelihood: -119938.871984
EM: Round [245] log likelihood: -119938.863941
EM: Round [246] log likelihood: -119938.855956
EM: Round [247] log likelihood: -119938.848027
EM: Round [248] log likelihood: -119938.840154
EM: Round [249] log likelihood: -119938.832337
EM: Round [250] log likelihood: -119938.824574
EM: Round [251] log likelihood: -119938.816865
EM: Round [252] log likelihood: -119938.809209
EM: Round [253] log likelihood: -119938.801607
EM: Round [254] log likelihood: -119938.794056
EM: Round [255] log likelihood: -119938.786558
EM: Round [256] log likelihood: -119938.779111
EM: Round [257] log likelihood: -119938.771715
EM: Round [258] log likelihood: -119938.764369
EM: Round [259] log likelihood: -119938.757072
EM: Round [260] log likelihood: -119938.749825
EM: Round [261] log likelihood: -119938.742627
EM: Round [262] log likelihood: -119938.735477
EM: Round [263] log likelihood: -119938.728375
EM: Round [264] log likelihood: -119938.721320
EM: Round [265] log likelihood: -119938.714312
EM: Round [266] log likelihood: -119938.707351
EM: Round [267] log likelihood: -119938.700435
EM: Round [268] log likelihood: -119938.693565
EM: Round [269] log likelihood: -119938.686740
EM: Round [270] log likelihood: -119938.679960
EM: Round [271] log likelihood: -119938.673224
EM: Round [272] log likelihood: -119938.666532
EM: Round [273] log likelihood: -119938.659883
EM: Round [274] log likelihood: -119938.653278
EM: Round [275] log likelihood: -119938.646715
EM: Round [276] log likelihood: -119938.640194
EM: Round [277] log likelihood: -119938.633715
EM: Round [278] log likelihood: -119938.627277
EM: Round [279] log likelihood: -119938.620881
EM: Round [280] log likelihood: -119938.614525
EM: Round [281] log likelihood: -119938.608210
EM: Round [282] log likelihood: -119938.601934
EM: Round [283] log likelihood: -119938.595699
EM: Round [284] log likelihood: -119938.589502
EM: Round [285] log likelihood: -119938.583345
EM: Round [286] log likelihood: -119938.577226
EM: Round [287] log likelihood: -119938.571145
EM: Round [288] log likelihood: -119938.565103
EM: Round [289] log likelihood: -119938.559098
EM: Round [290] log likelihood: -119938.553130
EM: Round [291] log likelihood: -119938.547199
EM: Round [292] log likelihood: -119938.541305
EM: Round [293] log likelihood: -119938.535447
EM: Round [294] log likelihood: -119938.529626
EM: Round [295] log likelihood: -119938.523840
EM: Round [296] log likelihood: -119938.518089
EM: Round [297] log likelihood: -119938.512374
EM: Round [298] log likelihood: -119938.506693
EM: Round [299] log likelihood: -119938.501048
EM: Round [300] log likelihood: -119938.495436
EM: Round [301] log likelihood: -119938.489858
EM: Round [302] log likelihood: -119938.484315
EM: Round [303] log likelihood: -119938.478804
EM: Round [304] log likelihood: -119938.473327
EM: Round [305] log likelihood: -119938.467883
EM: Round [306] log likelihood: -119938.462471
EM: Round [307] log likelihood: -119938.457092
EM: Round [308] log likelihood: -119938.451745
EM: Round [309] log likelihood: -119938.446430
EM: Round [310] log likelihood: -119938.441147
EM: Round [311] log likelihood: -119938.435895
EM: Round [312] log likelihood: -119938.430674
EM: Round [313] log likelihood: -119938.425484
EM: Round [314] log likelihood: -119938.420324
EM: Round [315] log likelihood: -119938.415196
EM: Round [316] log likelihood: -119938.410097
EM: Round [317] log likelihood: -119938.405028
EM: Round [318] log likelihood: -119938.399989
EM: Round [319] log likelihood: -119938.394980
EM: Round [320] log likelihood: -119938.390000
EM: Round [321] log likelihood: -119938.385049
EM: Round [322] log likelihood: -119938.380127
EM: Round [323] log likelihood: -119938.375233
EM: Round [324] log likelihood: -119938.370368
EM: Round [325] log likelihood: -119938.365531
EM: Round [326] log likelihood: -119938.360723
EM: Round [327] log likelihood: -119938.355942
EM: Round [328] log likelihood: -119938.351188
EM: Round [329] log likelihood: -119938.346462
EM: Round [330] log likelihood: -119938.341763
EM: Round [331] log likelihood: -119938.337092
EM: Round [332] log likelihood: -119938.332447
EM: Round [333] log likelihood: -119938.327828
EM: Round [334] log likelihood: -119938.323236
EM: Round [335] log likelihood: -119938.318671
EM: Round [336] log likelihood: -119938.314131
EM: Round [337] log likelihood: -119938.309617
EM: Round [338] log likelihood: -119938.305129
EM: Round [339] log likelihood: -119938.300666
EM: Round [340] log likelihood: -119938.296229
EM: Round [341] log likelihood: -119938.291817
EM: Round [342] log likelihood: -119938.287430
EM: Round [343] log likelihood: -119938.283067
EM: Round [344] log likelihood: -119938.278729
EM: Round [345] log likelihood: -119938.274416
EM: Round [346] log likelihood: -119938.270127
EM: Round [347] log likelihood: -119938.265862
EM: Round [348] log likelihood: -119938.261621
EM: Round [349] log likelihood: -119938.257403
EM: Round [350] log likelihood: -119938.253209
EM: Round [351] log likelihood: -119938.249039
EM: Round [352] log likelihood: -119938.244892
EM: Round [353] log likelihood: -119938.240768
EM: Round [354] log likelihood: -119938.236667
EM: Round [355] log likelihood: -119938.232589
EM: Round [356] log likelihood: -119938.228534
EM: Round [357] log likelihood: -119938.224501
EM: Round [358] log likelihood: -119938.220490
EM: Round [359] log likelihood: -119938.216502
EM: Round [360] log likelihood: -119938.212536
EM: Round [361] log likelihood: -119938.208591
EM: Round [362] log likelihood: -119938.204669
EM: Round [363] log likelihood: -119938.200767
EM: Round [364] log likelihood: -119938.196888
EM: Round [365] log likelihood: -119938.193030
EM: Round [366] log likelihood: -119938.189193
EM: Round [367] log likelihood: -119938.185377
EM: Round [368] log likelihood: -119938.181582
EM: Round [369] log likelihood: -119938.177807
EM: Round [370] log likelihood: -119938.174054
EM: Round [371] log likelihood: -119938.170321
EM: Round [372] log likelihood: -119938.166608
EM: Round [373] log likelihood: -119938.162915
EM: Round [374] log likelihood: -119938.159243
EM: Round [375] log likelihood: -119938.155590
EM: Round [376] log likelihood: -119938.151958
EM: Round [377] log likelihood: -119938.148345
EM: Round [378] log likelihood: -119938.144752
EM: Round [379] log likelihood: -119938.141178
EM: Round [380] log likelihood: -119938.137624
EM: Round [381] log likelihood: -119938.134088
EM: Round [382] log likelihood: -119938.130572
EM: Round [383] log likelihood: -119938.127075
EM: Round [384] log likelihood: -119938.123597
EM: Round [385] log likelihood: -119938.120137
EM: Round [386] log likelihood: -119938.116697
EM: Round [387] log likelihood: -119938.113274
EM: Round [388] log likelihood: -119938.109870
EM: Round [389] log likelihood: -119938.106485
EM: Round [390] log likelihood: -119938.103117
EM: Round [391] log likelihood: -119938.099767
EM: Round [392] log likelihood: -119938.096436
EM: Round [393] log likelihood: -119938.093122
EM: Round [394] log likelihood: -119938.089826
EM: Round [395] log likelihood: -119938.086548
EM: Round [396] log likelihood: -119938.083287
EM: Round [397] log likelihood: -119938.080043
EM: Round [398] log likelihood: -119938.076817
EM: Round [399] log likelihood: -119938.073608
EM: Round [400] log likelihood: -119938.070416
EM: Round [401] log likelihood: -119938.067241
EM: Round [402] log likelihood: -119938.064082
EM: Round [403] log likelihood: -119938.060941
EM: Round [404] log likelihood: -119938.057816
EM: Round [405] log likelihood: -119938.054708
EM: Round [406] log likelihood: -119938.051616
EM: Round [407] log likelihood: -119938.048541
EM: Round [408] log likelihood: -119938.045481
EM: Round [409] log likelihood: -119938.042438
EM: Round [410] log likelihood: -119938.039411
EM: Round [411] log likelihood: -119938.036400
EM: Round [412] log likelihood: -119938.033405
EM: Round [413] log likelihood: -119938.030425
EM: Round [414] log likelihood: -119938.027462
EM: Round [415] log likelihood: -119938.024514
EM: Round [416] log likelihood: -119938.021581
EM: Round [417] log likelihood: -119938.018663
EM: Round [418] log likelihood: -119938.015761
EM: Round [419] log likelihood: -119938.012875
EM: Round [420] log likelihood: -119938.010003
EM: Round [421] log likelihood: -119938.007146
EM: Round [422] log likelihood: -119938.004305
EM: Round [423] log likelihood: -119938.001478
EM: Round [424] log likelihood: -119937.998666
EM: Round [425] log likelihood: -119937.995868
EM: Round [426] log likelihood: -119937.993085
EM: Round [427] log likelihood: -119937.990317
EM: Round [428] log likelihood: -119937.987563
EM: Round [429] log likelihood: -119937.984823
EM: Round [430] log likelihood: -119937.982098
EM: Round [431] log likelihood: -119937.979387
EM: Round [432] log likelihood: -119937.976690
EM: Round [433] log likelihood: -119937.974007
EM: Round [434] log likelihood: -119937.971337
EM: Round [435] log likelihood: -119937.968682
EM: Round [436] log likelihood: -119937.966040
EM: Round [437] log likelihood: -119937.963412
EM: Round [438] log likelihood: -119937.960798
EM: Round [439] log likelihood: -119937.958197
EM: Round [440] log likelihood: -119937.955610
EM: Round [441] log likelihood: -119937.953036
EM: Round [442] log likelihood: -119937.950475
EM: Round [443] log likelihood: -119937.947928
EM: Round [444] log likelihood: -119937.945393
EM: Round [445] log likelihood: -119937.942872
EM: Round [446] log likelihood: -119937.940363
EM: Round [447] log likelihood: -119937.937868
EM: Round [448] log likelihood: -119937.935385
EM: Round [449] log likelihood: -119937.932916
EM: Round [450] log likelihood: -119937.930458
EM: Round [451] log likelihood: -119937.928014
EM: Round [452] log likelihood: -119937.925582
EM: Round [453] log likelihood: -119937.923162
EM: Round [454] log likelihood: -119937.920755
EM: Round [455] log likelihood: -119937.918360
EM: Round [456] log likelihood: -119937.915978
EM: Round [457] log likelihood: -119937.913607
EM: Round [458] log likelihood: -119937.911249
EM: Round [459] log likelihood: -119937.908903
EM: Round [460] log likelihood: -119937.906569
EM: Round [461] log likelihood: -119937.904246
EM: Round [462] log likelihood: -119937.901936
EM: Round [463] log likelihood: -119937.899637
EM: Round [464] log likelihood: -119937.897350
EM: Round [465] log likelihood: -119937.895075
EM: Round [466] log likelihood: -119937.892811
EM: Round [467] log likelihood: -119937.890559
EM: Round [468] log likelihood: -119937.888318
EM: Round [469] log likelihood: -119937.886089
EM: Round [470] log likelihood: -119937.883871
EM: Round [471] log likelihood: -119937.881664
EM: Round [472] log likelihood: -119937.879468
EM: Round [473] log likelihood: -119937.877284
EM: Round [474] log likelihood: -119937.875110
EM: Round [475] log likelihood: -119937.872948
EM: Round [476] log likelihood: -119937.870797
EM: Round [477] log likelihood: -119937.868656
EM: Round [478] log likelihood: -119937.866526
EM: Round [479] log likelihood: -119937.864407
EM: Round [480] log likelihood: -119937.862299
EM: Round [481] log likelihood: -119937.860202
EM: Round [482] log likelihood: -119937.858115
EM: Round [483] log likelihood: -119937.856038
EM: Round [484] log likelihood: -119937.853972
EM: Round [485] log likelihood: -119937.851917
EM: Round [486] log likelihood: -119937.849872
EM: Round [487] log likelihood: -119937.847837
EM: Round [488] log likelihood: -119937.845812
EM: Round [489] log likelihood: -119937.843798
EM: Round [490] log likelihood: -119937.841793
EM: Round [491] log likelihood: -119937.839799
EM: Round [492] log likelihood: -119937.837815
EM: Round [493] log likelihood: -119937.835841
EM: Round [494] log likelihood: -119937.833877
EM: Round [495] log likelihood: -119937.831922
EM: Round [496] log likelihood: -119937.829977
EM: Round [497] log likelihood: -119937.828043
EM: Round [498] log likelihood: -119937.826117
EM: Round [499] log likelihood: -119937.824202
EM: Round [500] log likelihood: -119937.822296
EM: Round [501] log likelihood: -119937.820400
EM: Round [502] log likelihood: -119937.818513
EM: Round [503] log likelihood: -119937.816635
EM: Round [504] log likelihood: -119937.814767
EM: Round [505] log likelihood: -119937.812908
EM: Round [506] log likelihood: -119937.811059
EM: Round [507] log likelihood: -119937.809219
EM: Round [508] log likelihood: -119937.807388
EM: Round [509] log likelihood: -119937.805566
EM: Round [510] log likelihood: -119937.803753
EM: Round [511] log likelihood: -119937.801949
EM: Round [512] log likelihood: -119937.800154
EM: Round [513] log likelihood: -119937.798369
EM: Round [514] log likelihood: -119937.796592
EM: Round [515] log likelihood: -119937.794823
EM: Round [516] log likelihood: -119937.793064
EM: Round [517] log likelihood: -119937.791314
EM: Round [518] log likelihood: -119937.789572
EM: Round [519] log likelihood: -119937.787839
EM: Round [520] log likelihood: -119937.786114
EM: Round [521] log likelihood: -119937.784398
EM: Round [522] log likelihood: -119937.782691
EM: Round [523] log likelihood: -119937.780992
EM: Round [524] log likelihood: -119937.779301
EM: Round [525] log likelihood: -119937.777619
EM: Round [526] log likelihood: -119937.775945
EM: Round [527] log likelihood: -119937.774279
EM: Round [528] log likelihood: -119937.772622
EM: Round [529] log likelihood: -119937.770973
EM: Round [530] log likelihood: -119937.769332
EM: Round [531] log likelihood: -119937.767699
EM: Round [532] log likelihood: -119937.766074
EM: Round [533] log likelihood: -119937.764458
EM: Round [534] log likelihood: -119937.762849
EM: Round [535] log likelihood: -119937.761248
EM: Round [536] log likelihood: -119937.759655
EM: Round [537] log likelihood: -119937.758070
EM: Round [538] log likelihood: -119937.756493
EM: Round [539] log likelihood: -119937.754924
EM: Round [540] log likelihood: -119937.753362
EM: Round [541] log likelihood: -119937.751808
EM: Round [542] log likelihood: -119937.750262
EM: Round [543] log likelihood: -119937.748723
EM: Round [544] log likelihood: -119937.747192
EM: Round [545] log likelihood: -119937.745668
EM: Round [546] log likelihood: -119937.744152
EM: Round [547] log likelihood: -119937.742644
EM: Round [548] log likelihood: -119937.741143
EM: Round [549] log likelihood: -119937.739649
EM: Round [550] log likelihood: -119937.738162
EM: Round [551] log likelihood: -119937.736683
EM: Round [552] log likelihood: -119937.735211
EM: Round [553] log likelihood: -119937.733747
EM: Round [554] log likelihood: -119937.732289
EM: Round [555] log likelihood: -119937.730839
EM: Round [556] log likelihood: -119937.729396
EM: Round [557] log likelihood: -119937.727959
EM: Round [558] log likelihood: -119937.726530
EM: Round [559] log likelihood: -119937.725108
EM: Round [560] log likelihood: -119937.723693
EM: Round [561] log likelihood: -119937.722285
EM: Round [562] log likelihood: -119937.720884
EM: Round [563] log likelihood: -119937.719489
EM: Round [564] log likelihood: -119937.718102
EM: Round [565] log likelihood: -119937.716721
EM: Round [566] log likelihood: -119937.715347
EM: Round [567] log likelihood: -119937.713979
EM: Round [568] log likelihood: -119937.712619
EM: Round [569] log likelihood: -119937.711265
EM: Round [570] log likelihood: -119937.709917
EM: Round [571] log likelihood: -119937.708577
EM: Round [572] log likelihood: -119937.707242
EM: Round [573] log likelihood: -119937.705914
EM: Round [574] log likelihood: -119937.704593
EM: Round [575] log likelihood: -119937.703278
EM: Round [576] log likelihood: -119937.701970
EM: Round [577] log likelihood: -119937.700668
EM: Round [578] log likelihood: -119937.699372
EM: Round [579] log likelihood: -119937.698083
EM: Round [580] log likelihood: -119937.696800
EM: Round [581] log likelihood: -119937.695523
EM: Round [582] log likelihood: -119937.694252
EM: Round [583] log likelihood: -119937.692988
EM: Round [584] log likelihood: -119937.691729
EM: Round [585] log likelihood: -119937.690477
EM: Round [586] log likelihood: -119937.689231
EM: Round [587] log likelihood: -119937.687991
EM: Round [588] log likelihood: -119937.686757
EM: Round [589] log likelihood: -119937.685529
EM: Round [590] log likelihood: -119937.684307
EM: Round [591] log likelihood: -119937.683091
EM: Round [592] log likelihood: -119937.681881
EM: Round [593] log likelihood: -119937.680676
EM: Round [594] log likelihood: -119937.679478
EM: Round [595] log likelihood: -119937.678285
EM: Round [596] log likelihood: -119937.677098
EM: Round [597] log likelihood: -119937.675917
EM: Round [598] log likelihood: -119937.674742
EM: Round [599] log likelihood: -119937.673572
EM: Round [600] log likelihood: -119937.672408
EM: Round [601] log likelihood: -119937.671249
EM: Round [602] log likelihood: -119937.670097
EM: Round [603] log likelihood: -119937.668949
EM: Round [604] log likelihood: -119937.667808
EM: Round [605] log likelihood: -119937.666672
EM: Round [606] log likelihood: -119937.665541
EM: Round [607] log likelihood: -119937.664416
EM: Round [608] log likelihood: -119937.663296
EM: Round [609] log likelihood: -119937.662182
EM: Round [610] log likelihood: -119937.661073
EM: Round [611] log likelihood: -119937.659969
EM: Round [612] log likelihood: -119937.658871
EM: Round [613] log likelihood: -119937.657778
EM: Round [614] log likelihood: -119937.656690
EM: Round [615] log likelihood: -119937.655608
EM: Round [616] log likelihood: -119937.654530
EM: Round [617] log likelihood: -119937.653458
EM: Round [618] log likelihood: -119937.652392
EM: Round [619] log likelihood: -119937.651330
EM: Round [620] log likelihood: -119937.650273
EM: Round [621] log likelihood: -119937.649222
EM: Round [622] log likelihood: -119937.648175
EM: Round [623] log likelihood: -119937.647134
EM: Round [624] log likelihood: -119937.646098
EM: Round [625] log likelihood: -119937.645066
EM: Round [626] log likelihood: -119937.644040
EM: Round [627] log likelihood: -119937.643018
EM: Round [628] log likelihood: -119937.642002
EM: Round [629] log likelihood: -119937.640990
EM: Round [630] log likelihood: -119937.639983
EM: Round [631] log likelihood: -119937.638981
EM: Round [632] log likelihood: -119937.637984
EM: Round [633] log likelihood: -119937.636992
EM: Round [634] log likelihood: -119937.636004
EM: Round [635] log likelihood: -119937.635021
EM: Round [636] log likelihood: -119937.634043
EM: Round [637] log likelihood: -119937.633070
EM: Round [638] log likelihood: -119937.632101
EM: Round [639] log likelihood: -119937.631137
EM: Round [640] log likelihood: -119937.630177
EM: Round [641] log likelihood: -119937.629222
EM: Round [642] log likelihood: -119937.628272
EM: Round [643] log likelihood: -119937.627326
EM: Round [644] log likelihood: -119937.626385
EM: Round [645] log likelihood: -119937.625449
EM: Round [646] log likelihood: -119937.624516
EM: Round [647] log likelihood: -119937.623589
EM: Round [648] log likelihood: -119937.622665
EM: Round [649] log likelihood: -119937.621746
EM: Round [650] log likelihood: -119937.620832
EM: Round [651] log likelihood: -119937.619922
EM: Round [652] log likelihood: -119937.619016
EM: Round [653] log likelihood: -119937.618115
EM: Round [654] log likelihood: -119937.617218
EM: Round [655] log likelihood: -119937.616325
EM: Round [656] log likelihood: -119937.615436
EM: Round [657] log likelihood: -119937.614552
EM: Round [658] log likelihood: -119937.613672
EM: Round [659] log likelihood: -119937.612796
EM: Round [660] log likelihood: -119937.611924
EM: Round [661] log likelihood: -119937.611057
EM: Round [662] log likelihood: -119937.610194
EM: Round [663] log likelihood: -119937.609334
EM: Round [664] log likelihood: -119937.608479
EM: Round [665] log likelihood: -119937.607628
EM: Round [666] log likelihood: -119937.606781
EM: Round [667] log likelihood: -119937.605938
EM: Round [668] log likelihood: -119937.605099
EM: Round [669] log likelihood: -119937.604264
EM: Round [670] log likelihood: -119937.603433
EM: Round [671] log likelihood: -119937.602606
EM: Round [672] log likelihood: -119937.601783
EM: Round [673] log likelihood: -119937.600964
EM: Round [674] log likelihood: -119937.600149
EM: Round [675] log likelihood: -119937.599338
EM: Round [676] log likelihood: -119937.598530
EM: Round [677] log likelihood: -119937.597727
EM: Round [678] log likelihood: -119937.596927
EM: Round [679] log likelihood: -119937.596131
EM: Round [680] log likelihood: -119937.595339
EM: Round [681] log likelihood: -119937.594550
EM: Round [682] log likelihood: -119937.593766
EM: Round [683] log likelihood: -119937.592985
EM: Round [684] log likelihood: -119937.592208
EM: Round [685] log likelihood: -119937.591434
EM: Round [686] log likelihood: -119937.590664
EM: Round [687] log likelihood: -119937.589898
EM: Round [688] log likelihood: -119937.589136
EM: Round [689] log likelihood: -119937.588377
EM: Round [690] log likelihood: -119937.587621
EM: Round [691] log likelihood: -119937.586870
EM: Round [692] log likelihood: -119937.586122
EM: Round [693] log likelihood: -119937.585377
EM: Round [694] log likelihood: -119937.584636
EM: Round [695] log likelihood: -119937.583898
EM: Round [696] log likelihood: -119937.583164
EM: Round [697] log likelihood: -119937.582434
EM: Round [698] log likelihood: -119937.581707
EM: Round [699] log likelihood: -119937.580983
EM: Round [700] log likelihood: -119937.580263
EM: Round [701] log likelihood: -119937.579546
EM: Round [702] log likelihood: -119937.578833
EM: Round [703] log likelihood: -119937.578123
EM: Round [704] log likelihood: -119937.577416
EM: Round [705] log likelihood: -119937.576713
EM: Round [706] log likelihood: -119937.576013
EM: Round [707] log likelihood: -119937.575316
EM: Round [708] log likelihood: -119937.574623
EM: Round [709] log likelihood: -119937.573933
EM: Round [710] log likelihood: -119937.573246
EM: Round [711] log likelihood: -119937.572562
EM: Round [712] log likelihood: -119937.571882
EM: Round [713] log likelihood: -119937.571205
EM: Round [714] log likelihood: -119937.570531
EM: Round [715] log likelihood: -119937.569861
EM: Round [716] log likelihood: -119937.569193
EM: Round [717] log likelihood: -119937.568529
EM: Round [718] log likelihood: -119937.567867
EM: Round [719] log likelihood: -119937.567209
EM: Round [720] log likelihood: -119937.566554
EM: Round [721] log likelihood: -119937.565903
EM: Round [722] log likelihood: -119937.565254
EM: Round [723] log likelihood: -119937.564608
EM: Round [724] log likelihood: -119937.563965
EM: Round [725] log likelihood: -119937.563326
EM: Round [726] log likelihood: -119937.562689
EM: Round [727] log likelihood: -119937.562055
EM: Round [728] log likelihood: -119937.561425
EM: Round [729] log likelihood: -119937.560797
EM: Round [730] log likelihood: -119937.560173
EM: Round [731] log likelihood: -119937.559551
EM: Round [732] log likelihood: -119937.558932
EM: Round [733] log likelihood: -119937.558316
EM: Round [734] log likelihood: -119937.557703
EM: Round [735] log likelihood: -119937.557093
EM: Round [736] log likelihood: -119937.556486
EM: Round [737] log likelihood: -119937.555882
EM: Round [738] log likelihood: -119937.555280
EM: Round [739] log likelihood: -119937.554681
EM: Round [740] log likelihood: -119937.554086
EM: Round [741] log likelihood: -119937.553493
EM: Round [742] log likelihood: -119937.552902
EM: Round [743] log likelihood: -119937.552315
EM: Round [744] log likelihood: -119937.551730
EM: Round [745] log likelihood: -119937.551148
EM: Round [746] log likelihood: -119937.550569
EM: Round [747] log likelihood: -119937.549993
EM: Round [748] log likelihood: -119937.549419
EM: Round [749] log likelihood: -119937.548848
EM: Round [750] log likelihood: -119937.548280
EM: Round [751] log likelihood: -119937.547714
EM: Round [752] log likelihood: -119937.547151
EM: Round [753] log likelihood: -119937.546591
EM: Round [754] log likelihood: -119937.546033
EM: Round [755] log likelihood: -119937.545478
EM: Round [756] log likelihood: -119937.544925
EM: Round [757] log likelihood: -119937.544375
EM: Round [758] log likelihood: -119937.543828
EM: Round [759] log likelihood: -119937.543283
EM: Round [760] log likelihood: -119937.542741
EM: Round [761] log likelihood: -119937.542201
EM: Round [762] log likelihood: -119937.541664
EM: Round [763] log likelihood: -119937.541130
EM: Round [764] log likelihood: -119937.540598
EM: Round [765] log likelihood: -119937.540068
EM: Round [766] log likelihood: -119937.539541
EM: Round [767] log likelihood: -119937.539017
EM: Round [768] log likelihood: -119937.538494
EM: Round [769] log likelihood: -119937.537975
EM: Round [770] log likelihood: -119937.537458
EM: Round [771] log likelihood: -119937.536943
EM: Round [772] log likelihood: -119937.536430
EM: Round [773] log likelihood: -119937.535920
EM: Round [774] log likelihood: -119937.535413
EM: Round [775] log likelihood: -119937.534908
EM: Round [776] log likelihood: -119937.534405
EM: Round [777] log likelihood: -119937.533904
EM: Round [778] log likelihood: -119937.533406
EM: Round [779] log likelihood: -119937.532910
EM: Round [780] log likelihood: -119937.532417
EM: Round [781] log likelihood: -119937.531926
EM: Round [782] log likelihood: -119937.531437
EM: Round [783] log likelihood: -119937.530950
EM: Round [784] log likelihood: -119937.530466
EM: Round [785] log likelihood: -119937.529984
EM: Round [786] log likelihood: -119937.529504
EM: Round [787] log likelihood: -119937.529027
EM: Round [788] log likelihood: -119937.528551
EM: Round [789] log likelihood: -119937.528078
EM: Round [790] log likelihood: -119937.527607
EM: Round [791] log likelihood: -119937.527139
EM: Round [792] log likelihood: -119937.526672
EM: Round [793] log likelihood: -119937.526208
EM: Round [794] log likelihood: -119937.525746
EM: Round [795] log likelihood: -119937.525286
EM: Round [796] log likelihood: -119937.524828
EM: Round [797] log likelihood: -119937.524373
EM: Round [798] log likelihood: -119937.523919
EM: Round [799] log likelihood: -119937.523468
EM: Round [800] log likelihood: -119937.523019
EM: Round [801] log likelihood: -119937.522571
EM: Round [802] log likelihood: -119937.522126
EM: Round [803] log likelihood: -119937.521683
EM: Round [804] log likelihood: -119937.521242
EM: Round [805] log likelihood: -119937.520804
EM: Round [806] log likelihood: -119937.520367
EM: Round [807] log likelihood: -119937.519932
EM: Round [808] log likelihood: -119937.519499
EM: Round [809] log likelihood: -119937.519069
EM: Round [810] log likelihood: -119937.518640
EM: Round [811] log likelihood: -119937.518213
EM: Round [812] log likelihood: -119937.517788
EM: Round [813] log likelihood: -119937.517366
EM: Round [814] log likelihood: -119937.516945
EM: Round [815] log likelihood: -119937.516526
EM: Round [816] log likelihood: -119937.516109
EM: Round [817] log likelihood: -119937.515694
EM: Round [818] log likelihood: -119937.515282
EM: Round [819] log likelihood: -119937.514870
EM: Round [820] log likelihood: -119937.514461
EM: Round [821] log likelihood: -119937.514054
EM: Round [822] log likelihood: -119937.513649
EM: Round [823] log likelihood: -119937.513245
EM: Round [824] log likelihood: -119937.512844
EM: Round [825] log likelihood: -119937.512444
EM: Round [826] log likelihood: -119937.512047
EM: Round [827] log likelihood: -119937.511651
EM: Round [828] log likelihood: -119937.511257
EM: Round [829] log likelihood: -119937.510864
EM: Round [830] log likelihood: -119937.510474
EM: Round [831] log likelihood: -119937.510085
EM: Round [832] log likelihood: -119937.509698
EM: Round [833] log likelihood: -119937.509313
EM: Round [834] log likelihood: -119937.508930
EM: Round [835] log likelihood: -119937.508549
EM: Round [836] log likelihood: -119937.508169
EM: Round [837] log likelihood: -119937.507791
EM: Round [838] log likelihood: -119937.507415
EM: Round [839] log likelihood: -119937.507041
EM: Round [840] log likelihood: -119937.506668
EM: Round [841] log likelihood: -119937.506297
EM: Round [842] log likelihood: -119937.505928
EM: Round [843] log likelihood: -119937.505561
EM: Round [844] log likelihood: -119937.505195
EM: Round [845] log likelihood: -119937.504831
EM: Round [846] log likelihood: -119937.504469
EM: Round [847] log likelihood: -119937.504108
EM: Round [848] log likelihood: -119937.503749
EM: Round [849] log likelihood: -119937.503392
EM: Round [850] log likelihood: -119937.503036
EM: Round [851] log likelihood: -119937.502682
EM: Round [852] log likelihood: -119937.502330
EM: Round [853] log likelihood: -119937.501979
EM: Round [854] log likelihood: -119937.501630
EM: Round [855] log likelihood: -119937.501283
EM: Round [856] log likelihood: -119937.500937
EM: Round [857] log likelihood: -119937.500593
EM: Round [858] log likelihood: -119937.500250
EM: Round [859] log likelihood: -119937.499909
EM: Round [860] log likelihood: -119937.499570
EM: Round [861] log likelihood: -119937.499232
EM: Round [862] log likelihood: -119937.498895
EM: Round [863] log likelihood: -119937.498561
EM: Round [864] log likelihood: -119937.498228
EM: Round [865] log likelihood: -119937.497896
EM: Round [866] log likelihood: -119937.497566
EM: Round [867] log likelihood: -119937.497237
EM: Round [868] log likelihood: -119937.496910
EM: Round [869] log likelihood: -119937.496585
EM: Round [870] log likelihood: -119937.496261
EM: Round [871] log likelihood: -119937.495938
EM: Round [872] log likelihood: -119937.495617
EM: Round [873] log likelihood: -119937.495298
EM: Round [874] log likelihood: -119937.494980
EM: Round [875] log likelihood: -119937.494663
EM: Round [876] log likelihood: -119937.494348
EM: Round [877] log likelihood: -119937.494034
EM: Round [878] log likelihood: -119937.493722
EM: Round [879] log likelihood: -119937.493412
EM: Round [880] log likelihood: -119937.493102
EM: Round [881] log likelihood: -119937.492794
EM: Round [882] log likelihood: -119937.492488
EM: Round [883] log likelihood: -119937.492183
EM: Round [884] log likelihood: -119937.491879
EM: Round [885] log likelihood: -119937.491577
EM: Round [886] log likelihood: -119937.491276
EM: Round [887] log likelihood: -119937.490977
EM: Round [888] log likelihood: -119937.490679
EM: Round [889] log likelihood: -119937.490383
EM: Round [890] log likelihood: -119937.490087
EM: Round [891] log likelihood: -119937.489793
EM: Round [892] log likelihood: -119937.489501
EM: Round [893] log likelihood: -119937.489210
EM: Round [894] log likelihood: -119937.488920
EM: Round [895] log likelihood: -119937.488631
EM: Round [896] log likelihood: -119937.488344
EM: Round [897] log likelihood: -119937.488059
EM: Round [898] log likelihood: -119937.487774
EM: Round [899] log likelihood: -119937.487491
EM: Round [900] log likelihood: -119937.487209
EM: Round [901] log likelihood: -119937.486928
EM: Round [902] log likelihood: -119937.486649
EM: Round [903] log likelihood: -119937.486371
EM: Round [904] log likelihood: -119937.486095
EM: Round [905] log likelihood: -119937.485819
EM: Round [906] log likelihood: -119937.485545
EM: Round [907] log likelihood: -119937.485272
EM: Round [908] log likelihood: -119937.485001
EM: Round [909] log likelihood: -119937.484730
EM: Round [910] log likelihood: -119937.484461
EM: Round [911] log likelihood: -119937.484193
EM: Round [912] log likelihood: -119937.483927
EM: Round [913] log likelihood: -119937.483661
EM: Round [914] log likelihood: -119937.483397
EM: Round [915] log likelihood: -119937.483134
EM: Round [916] log likelihood: -119937.482873
EM: Round [917] log likelihood: -119937.482612
EM: Round [918] log likelihood: -119937.482353
EM: Round [919] log likelihood: -119937.482095
EM: Round [920] log likelihood: -119937.481838
EM: Round [921] log likelihood: -119937.481582
EM: Round [922] log likelihood: -119937.481328
EM: Round [923] log likelihood: -119937.481074
EM: Round [924] log likelihood: -119937.480822
EM: Round [925] log likelihood: -119937.480571
EM: Round [926] log likelihood: -119937.480321
EM: Round [927] log likelihood: -119937.480073
EM: Round [928] log likelihood: -119937.479825
EM: Round [929] log likelihood: -119937.479579
EM: Round [930] log likelihood: -119937.479333
EM: Round [931] log likelihood: -119937.479089
EM: Round [932] log likelihood: -119937.478846
EM: Round [933] log likelihood: -119937.478604
EM: Round [934] log likelihood: -119937.478364
EM: Round [935] log likelihood: -119937.478124
EM: Round [936] log likelihood: -119937.477885
EM: Round [937] log likelihood: -119937.477648
EM: Round [938] log likelihood: -119937.477412
EM: Round [939] log likelihood: -119937.477176
EM: Round [940] log likelihood: -119937.476942
EM: Round [941] log likelihood: -119937.476709
EM: Round [942] log likelihood: -119937.476477
EM: Round [943] log likelihood: -119937.476246
EM: Round [944] log likelihood: -119937.476016
EM: Round [945] log likelihood: -119937.475787
EM: Round [946] log likelihood: -119937.475559
EM: Round [947] log likelihood: -119937.475333
EM: Round [948] log likelihood: -119937.475107
EM: Round [949] log likelihood: -119937.474882
EM: Round [950] log likelihood: -119937.474659
EM: Round [951] log likelihood: -119937.474436
EM: Round [952] log likelihood: -119937.474215
EM: Round [953] log likelihood: -119937.473994
EM: Round [954] log likelihood: -119937.473775
EM: Round [955] log likelihood: -119937.473556
EM: Round [956] log likelihood: -119937.473339
EM: Round [957] log likelihood: -119937.473122
EM: Round [958] log likelihood: -119937.472907
EM: Round [959] log likelihood: -119937.472692
EM: Round [960] log likelihood: -119937.472479
EM: Round [961] log likelihood: -119937.472266
EM: Round [962] log likelihood: -119937.472054
EM: Round [963] log likelihood: -119937.471844
EM: Round [964] log likelihood: -119937.471634
EM: Round [965] log likelihood: -119937.471426
EM: Round [966] log likelihood: -119937.471218
EM: Round [967] log likelihood: -119937.471011
EM: Round [968] log likelihood: -119937.470805
EM: Round [969] log likelihood: -119937.470601
EM: Round [970] log likelihood: -119937.470397
EM: Round [971] log likelihood: -119937.470194
EM: Round [972] log likelihood: -119937.469992
EM: Round [973] log likelihood: -119937.469791
EM: Round [974] log likelihood: -119937.469590
EM: Round [975] log likelihood: -119937.469391
EM: Round [976] log likelihood: -119937.469193
EM: Round [977] log likelihood: -119937.468995
EM: Round [978] log likelihood: -119937.468799
EM: Round [979] log likelihood: -119937.468603
EM: Round [980] log likelihood: -119937.468409
EM: Round [981] log likelihood: -119937.468215
EM: Round [982] log likelihood: -119937.468022
EM: Round [983] log likelihood: -119937.467830
EM: Round [984] log likelihood: -119937.467639
EM: Round [985] log likelihood: -119937.467448
EM: Round [986] log likelihood: -119937.467259
EM: Round [987] log likelihood: -119937.467071
EM: Round [988] log likelihood: -119937.466883
EM: Round [989] log likelihood: -119937.466696
EM: Round [990] log likelihood: -119937.466510
EM: Round [991] log likelihood: -119937.466325
EM: Round [992] log likelihood: -119937.466141
EM: Round [993] log likelihood: -119937.465957
EM: Round [994] log likelihood: -119937.465775
EM: Round [995] log likelihood: -119937.465593
EM: Round [996] log likelihood: -119937.465412
EM: Round [997] log likelihood: -119937.465232
EM: Round [998] log likelihood: -119937.465053
EM: Round [999] log likelihood: -119937.464875
EM: Round [1000] log likelihood: -119937.464697
EM: Round [1001] log likelihood: -119937.464520
Execution Time = 0.04 minutes. CMD: /usr/local/src/STAR-Fusion/FusionInspector/util/fusion_EM_runner.pl /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.fusion_preds.coalesced.summary > /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.fusion_preds.coalesced.summary.EMadj
Running: touch /tmp/nxf.97TVOzPwtG/chckpts_dir/init_EM_adj_counts.ok
Running: /usr/local/src/STAR-Fusion/FusionInspector/util/filter_fusions_by_frag_thresholds.pl --min_junction_reads 0 --min_sum_frags 1 --min_novel_junction_support 3 --min_spanning_frags_only 5 --fusion_preds /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.fusion_preds.coalesced.summary.EMadj --require_LDAS 1 > /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.fusion_preds.coalesced.summary.EMadj.min_frag_thresh
Execution Time = 0.00 minutes. CMD: /usr/local/src/STAR-Fusion/FusionInspector/util/filter_fusions_by_frag_thresholds.pl --min_junction_reads 0 --min_sum_frags 1 --min_novel_junction_support 3 --min_spanning_frags_only 5 --fusion_preds /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.fusion_preds.coalesced.summary.EMadj --require_LDAS 1 > /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.fusion_preds.coalesced.summary.EMadj.min_frag_thresh
Running: touch /tmp/nxf.97TVOzPwtG/chckpts_dir/filter_by_frag_threshs.ok
Running: /usr/local/src/STAR-Fusion/FusionInspector/util/column_extractions.pl /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.fusion_preds.coalesced.summary LeftGene,RightGene,JunctionReads > /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.fusion_preds.coalesced.summary.fusion_junction_read_accs
Execution Time = 0.00 minutes. CMD: /usr/local/src/STAR-Fusion/FusionInspector/util/column_extractions.pl /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.fusion_preds.coalesced.summary LeftGene,RightGene,JunctionReads > /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.fusion_preds.coalesced.summary.fusion_junction_read_accs
Running: touch /tmp/nxf.97TVOzPwtG/chckpts_dir/prep_igv_extract_junc_reads.ok
Running: bash -c "set -eof pipefail; /usr/local/src/STAR-Fusion/FusionInspector/util/retrieve_fusion_junction_reads_by_accession.pl /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.fusion_preds.coalesced.summary.fusion_junction_read_accs /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.star.cSorted.dupsMarked.bam.fusion_junc_reads.sam | samtools view -@ 8 -bT /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.fa - | samtools sort -@ 8 - -o /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.junction_reads.bam"
[bam_sort_core] merging from 0 files and 8 in-memory blocks...
Execution Time = 0.02 minutes. CMD: bash -c "set -eof pipefail; /usr/local/src/STAR-Fusion/FusionInspector/util/retrieve_fusion_junction_reads_by_accession.pl /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.fusion_preds.coalesced.summary.fusion_junction_read_accs /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.star.cSorted.dupsMarked.bam.fusion_junc_reads.sam | samtools view -@ 8 -bT /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.fa - | samtools sort -@ 8 - -o /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.junction_reads.bam"
Running: touch /tmp/nxf.97TVOzPwtG/chckpts_dir/prep_igv_junc_reads_bam.ok
Running: samtools index /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.junction_reads.bam
Execution Time = 0.00 minutes. CMD: samtools index /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.junction_reads.bam
Running: touch /tmp/nxf.97TVOzPwtG/chckpts_dir/samtools_idx_junc_reads_bam.ok
Running: /usr/local/src/STAR-Fusion/FusionInspector/util/SAM_pair_to_bed.pl /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.junction_reads.bam > /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.junction_reads.bam.bed
Execution Time = 0.06 minutes. CMD: /usr/local/src/STAR-Fusion/FusionInspector/util/SAM_pair_to_bed.pl /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.junction_reads.bam > /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.junction_reads.bam.bed
Running: touch /tmp/nxf.97TVOzPwtG/chckpts_dir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.junction_reads.bam.bam_to_bed.ok
Running: sort -k1,1 -k2,2n /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.junction_reads.bam.bed > /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.junction_reads.bam.bed.sorted.bed
Execution Time = 0.00 minutes. CMD: sort -k1,1 -k2,2n /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.junction_reads.bam.bed > /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.junction_reads.bam.bed.sorted.bed
Running: touch /tmp/nxf.97TVOzPwtG/chckpts_dir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.junction_reads.bam.bedsort.ok
Running: bgzip -f /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.junction_reads.bam.bed.sorted.bed
Execution Time = 0.00 minutes. CMD: bgzip -f /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.junction_reads.bam.bed.sorted.bed
Running: touch /tmp/nxf.97TVOzPwtG/chckpts_dir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.junction_reads.bam.bgzip.ok
Running: tabix -p bed /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.junction_reads.bam.bed.sorted.bed.gz
Execution Time = 0.00 minutes. CMD: tabix -p bed /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.junction_reads.bam.bed.sorted.bed.gz
Running: touch /tmp/nxf.97TVOzPwtG/chckpts_dir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.junction_reads.bam.tabix.ok
Running: /usr/local/src/STAR-Fusion/FusionInspector/util/column_extractions.pl /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.fusion_preds.coalesced.summary LeftGene,RightGene,SpanningFrags > /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.fusion_preds.coalesced.summary.fusion_spanning_read_accs
Execution Time = 0.00 minutes. CMD: /usr/local/src/STAR-Fusion/FusionInspector/util/column_extractions.pl /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.fusion_preds.coalesced.summary LeftGene,RightGene,SpanningFrags > /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.fusion_preds.coalesced.summary.fusion_spanning_read_accs
Running: touch /tmp/nxf.97TVOzPwtG/chckpts_dir/span_reads_acc.ok
Running: samtools view -H /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.star.cSorted.dupsMarked.bam -b -o /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.spanning_reads.bam
Execution Time = 0.00 minutes. CMD: samtools view -H /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.star.cSorted.dupsMarked.bam -b -o /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.spanning_reads.bam
Running: touch /tmp/nxf.97TVOzPwtG/chckpts_dir/init_spanning_reads_bam.ok
Running: /usr/local/src/STAR-Fusion/FusionInspector/util/retrieve_fusion_spanning_reads_by_accession.pl /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.fusion_preds.coalesced.summary.fusion_spanning_read_accs /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.star.cSorted.dupsMarked.bam.fusion_span_reads.sam | samtools view -@ 8 -bT /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.fa - | samtools sort -@ 8 - -o /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.spanning_reads.bam || :
[bam_sort_core] merging from 0 files and 8 in-memory blocks...
Execution Time = 0.00 minutes. CMD: /usr/local/src/STAR-Fusion/FusionInspector/util/retrieve_fusion_spanning_reads_by_accession.pl /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.fusion_preds.coalesced.summary.fusion_spanning_read_accs /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.star.cSorted.dupsMarked.bam.fusion_span_reads.sam | samtools view -@ 8 -bT /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.fa - | samtools sort -@ 8 - -o /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.spanning_reads.bam || :
Running: touch /tmp/nxf.97TVOzPwtG/chckpts_dir/prep_spanning_reads.ok
Running: samtools index /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.spanning_reads.bam
Execution Time = 0.00 minutes. CMD: samtools index /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.spanning_reads.bam
Running: touch /tmp/nxf.97TVOzPwtG/chckpts_dir/samtools_index_span_reads_bam.ok
Running: /usr/local/src/STAR-Fusion/FusionInspector/util/SAM_pair_to_bed.pl /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.spanning_reads.bam > /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.spanning_reads.bam.bed
Execution Time = 0.00 minutes. CMD: /usr/local/src/STAR-Fusion/FusionInspector/util/SAM_pair_to_bed.pl /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.spanning_reads.bam > /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.spanning_reads.bam.bed
Running: touch /tmp/nxf.97TVOzPwtG/chckpts_dir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.spanning_reads.bam.bam_to_bed.ok
Running: sort -k1,1 -k2,2n /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.spanning_reads.bam.bed > /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.spanning_reads.bam.bed.sorted.bed
Execution Time = 0.00 minutes. CMD: sort -k1,1 -k2,2n /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.spanning_reads.bam.bed > /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.spanning_reads.bam.bed.sorted.bed
Running: touch /tmp/nxf.97TVOzPwtG/chckpts_dir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.spanning_reads.bam.bedsort.ok
Running: bgzip -f /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.spanning_reads.bam.bed.sorted.bed
Execution Time = 0.00 minutes. CMD: bgzip -f /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.spanning_reads.bam.bed.sorted.bed
Running: touch /tmp/nxf.97TVOzPwtG/chckpts_dir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.spanning_reads.bam.bgzip.ok
Running: tabix -p bed /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.spanning_reads.bam.bed.sorted.bed.gz
Execution Time = 0.00 minutes. CMD: tabix -p bed /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.spanning_reads.bam.bed.sorted.bed.gz
Running: touch /tmp/nxf.97TVOzPwtG/chckpts_dir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.spanning_reads.bam.tabix.ok
Running: cp /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.star.cSorted.dupsMarked.bam /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.consolidated.bam
Execution Time = 0.00 minutes. CMD: cp /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.star.cSorted.dupsMarked.bam /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.consolidated.bam
Running: touch /tmp/nxf.97TVOzPwtG/chckpts_dir/cp_consol_bam.ok
Running: samtools index /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.consolidated.bam
Execution Time = 0.10 minutes. CMD: samtools index /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.consolidated.bam
Running: touch /tmp/nxf.97TVOzPwtG/chckpts_dir/index_consol_bam.ok
Running: /usr/local/src/STAR-Fusion/FusionInspector/util/SAM_to_frag_coords.pl --sam /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.consolidated.bam --max_insert_size 10000000
-extracting read coordinates from /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.consolidated.bam into /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.consolidated.bam.read_coords
CMD: touch /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.consolidated.bam.read_coords.ok
CMD: /usr/bin/sort --parallel=1 -S10G -T . -k1,1 -k2,2 -k4,4n /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.consolidated.bam.read_coords > /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.consolidated.bam.read_coords.sort_by_readname
CMD: /usr/bin/sort --parallel=1 -S10G -T . -k1,1 -k3,3n /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.consolidated.bam.frag_coords > /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.consolidated.bam.frag_coords.coord_sorted
Execution Time = 2.36 minutes. CMD: /usr/local/src/STAR-Fusion/FusionInspector/util/SAM_to_frag_coords.pl --sam /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.consolidated.bam --max_insert_size 10000000
Running: touch /tmp/nxf.97TVOzPwtG/chckpts_dir/prep_igv_sam_frag_coordss.ok
Running: /usr/local/src/STAR-Fusion/FusionInspector/util/fusion_summary_to_igv_JuncSpan_fmt.pl /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.fusion_preds.coalesced.summary /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.consolidated.bam.frag_coords > /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.igv.FusionJuncSpan
Execution Time = 0.05 minutes. CMD: /usr/local/src/STAR-Fusion/FusionInspector/util/fusion_summary_to_igv_JuncSpan_fmt.pl /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.fusion_preds.coalesced.summary /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.consolidated.bam.frag_coords > /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.igv.FusionJuncSpan
Running: touch /tmp/nxf.97TVOzPwtG/chckpts_dir/prep_igv_juncspan_fmt.ok
Running: /usr/local/src/STAR-Fusion/FusionInspector/util/get_pfam_domain_info.pl --finspector_gtf /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.gtf --genome_lib_dir ctat_genome_lib_build_dir > /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.igv.Pfam.gff3
Execution Time = 0.00 minutes. CMD: /usr/local/src/STAR-Fusion/FusionInspector/util/get_pfam_domain_info.pl --finspector_gtf /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.gtf --genome_lib_dir ctat_genome_lib_build_dir > /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.igv.Pfam.gff3
Running: touch /tmp/nxf.97TVOzPwtG/chckpts_dir/prep_igv_pfam_gff3.ok
Running: /usr/local/src/STAR-Fusion/FusionInspector/util/transcript_gff3_to_bed.pl /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.igv.Pfam.gff3 > /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.igv.Pfam.bed
Execution Time = 0.00 minutes. CMD: /usr/local/src/STAR-Fusion/FusionInspector/util/transcript_gff3_to_bed.pl /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.igv.Pfam.gff3 > /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.igv.Pfam.bed
Running: touch /tmp/nxf.97TVOzPwtG/chckpts_dir/prep_igv_pfam_bed.ok
Running: /usr/local/src/STAR-Fusion/FusionInspector/util/get_seq_similar_region_FI_coordinates.pl --finspector_gtf /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.gtf --genome_lib_dir ctat_genome_lib_build_dir > /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.igv.seqsimilar.gff3
Execution Time = 0.00 minutes. CMD: /usr/local/src/STAR-Fusion/FusionInspector/util/get_seq_similar_region_FI_coordinates.pl --finspector_gtf /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.gtf --genome_lib_dir ctat_genome_lib_build_dir > /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.igv.seqsimilar.gff3
Running: touch /tmp/nxf.97TVOzPwtG/chckpts_dir/prep_igv_seqsim_gff3.ok
Running: /usr/local/src/STAR-Fusion/FusionInspector/util/transcript_gff3_to_bed.pl /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.igv.seqsimilar.gff3 > /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.igv.seqsimilar.bed
Execution Time = 0.00 minutes. CMD: /usr/local/src/STAR-Fusion/FusionInspector/util/transcript_gff3_to_bed.pl /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.igv.seqsimilar.gff3 > /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.igv.seqsimilar.bed
Running: touch /tmp/nxf.97TVOzPwtG/chckpts_dir/prep_igv_seqsim_bed.ok
Running: /usr/local/src/STAR-Fusion/FusionInspector/util/append_breakpoint_junction_info_via_FI_contigs.pl /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.fusion_preds.coalesced.summary.EMadj.min_frag_thresh /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.fa > /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.fusion_preds.coalesced.summary.EMadj.min_frag_thresh.wSpliceInfo
Execution Time = 0.00 minutes. CMD: /usr/local/src/STAR-Fusion/FusionInspector/util/append_breakpoint_junction_info_via_FI_contigs.pl /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.fusion_preds.coalesced.summary.EMadj.min_frag_thresh /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.fa > /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.fusion_preds.coalesced.summary.EMadj.min_frag_thresh.wSpliceInfo
Running: touch /tmp/nxf.97TVOzPwtG/chckpts_dir/add_splice_info.ok
Running: /usr/local/src/STAR-Fusion/FusionInspector/util/../FusionFilter/blast_and_promiscuity_filter.pl --fusion_preds /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.fusion_preds.coalesced.summary.EMadj.min_frag_thresh.wSpliceInfo --out_prefix /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1 --genome_lib_dir ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 50
CMD: /usr/local/src/STAR-Fusion/FusionInspector/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.fusion_preds.coalesced.summary.EMadj.min_frag_thresh.wSpliceInfo --genome_lib_dir ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionInspector/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.fusion_preds.coalesced.summary.EMadj.min_frag_thresh.wSpliceInfo.post_blast_filter --genome_lib_dir ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 50
CMD: cp /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.fusion_preds.coalesced.summary.EMadj.min_frag_thresh.wSpliceInfo.post_blast_filter.post_promisc_filter /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.post_blast_and_promiscuity_filter
Execution Time = 0.00 minutes. CMD: /usr/local/src/STAR-Fusion/FusionInspector/util/../FusionFilter/blast_and_promiscuity_filter.pl --fusion_preds /tmp/nxf.97TVOzPwtG/fi_workdir/659_dfA-T1-TRNA-1_B23MHV2LT4_1.fusion_preds.coalesced.summary.EMadj.min_frag_thresh.wSpliceInfo --out_prefix /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1 --genome_lib_dir ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 50
Running: touch /tmp/nxf.97TVOzPwtG/chckpts_dir/blast_filter.ok
Running: /usr/local/src/STAR-Fusion/FusionInspector/util/../FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.post_blast_and_promiscuity_filter --genome_lib_dir /tmp/nxf.97TVOzPwtG/ctat_genome_lib_build_dir
-done, see /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.post_blast_and_promiscuity_filter.annot_filter.pass
Execution Time = 0.00 minutes. CMD: /usr/local/src/STAR-Fusion/FusionInspector/util/../FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.post_blast_and_promiscuity_filter --genome_lib_dir /tmp/nxf.97TVOzPwtG/ctat_genome_lib_build_dir
Running: touch /tmp/nxf.97TVOzPwtG/chckpts_dir/annot_filter.ok
Running: /usr/local/src/STAR-Fusion/FusionInspector/util/fusion_EM_runner.pl /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.post_blast_and_promiscuity_filter.annot_filter.pass > /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.post_blast_and_promiscuity_filter.annot_filter.pass.EMadj
EM: Starting log likelihood: -108836.274452
EM: Round [1] log likelihood: -108658.164611
EM: Round [2] log likelihood: -108658.092765
EM: Round [3] log likelihood: -108658.080169
EM: Round [4] log likelihood: -108658.067884
EM: Round [5] log likelihood: -108658.055703
EM: Round [6] log likelihood: -108658.043623
EM: Round [7] log likelihood: -108658.031643
EM: Round [8] log likelihood: -108658.019760
EM: Round [9] log likelihood: -108658.007975
EM: Round [10] log likelihood: -108657.996286
EM: Round [11] log likelihood: -108657.984691
EM: Round [12] log likelihood: -108657.973190
EM: Round [13] log likelihood: -108657.961781
EM: Round [14] log likelihood: -108657.950463
EM: Round [15] log likelihood: -108657.939236
EM: Round [16] log likelihood: -108657.928098
EM: Round [17] log likelihood: -108657.917049
EM: Round [18] log likelihood: -108657.906086
EM: Round [19] log likelihood: -108657.895210
EM: Round [20] log likelihood: -108657.884419
EM: Round [21] log likelihood: -108657.873712
EM: Round [22] log likelihood: -108657.863088
EM: Round [23] log likelihood: -108657.852547
EM: Round [24] log likelihood: -108657.842087
EM: Round [25] log likelihood: -108657.831707
EM: Round [26] log likelihood: -108657.821407
EM: Round [27] log likelihood: -108657.811186
EM: Round [28] log likelihood: -108657.801043
EM: Round [29] log likelihood: -108657.790977
EM: Round [30] log likelihood: -108657.780987
EM: Round [31] log likelihood: -108657.771072
EM: Round [32] log likelihood: -108657.761232
EM: Round [33] log likelihood: -108657.751465
EM: Round [34] log likelihood: -108657.741772
EM: Round [35] log likelihood: -108657.732150
EM: Round [36] log likelihood: -108657.722600
EM: Round [37] log likelihood: -108657.713121
EM: Round [38] log likelihood: -108657.703711
EM: Round [39] log likelihood: -108657.694371
EM: Round [40] log likelihood: -108657.685099
EM: Round [41] log likelihood: -108657.675895
EM: Round [42] log likelihood: -108657.666758
EM: Round [43] log likelihood: -108657.657687
EM: Round [44] log likelihood: -108657.648682
EM: Round [45] log likelihood: -108657.639742
EM: Round [46] log likelihood: -108657.630866
EM: Round [47] log likelihood: -108657.622054
EM: Round [48] log likelihood: -108657.613305
EM: Round [49] log likelihood: -108657.604618
EM: Round [50] log likelihood: -108657.595993
EM: Round [51] log likelihood: -108657.587429
EM: Round [52] log likelihood: -108657.578926
EM: Round [53] log likelihood: -108657.570483
EM: Round [54] log likelihood: -108657.562099
EM: Round [55] log likelihood: -108657.553774
EM: Round [56] log likelihood: -108657.545507
EM: Round [57] log likelihood: -108657.537298
EM: Round [58] log likelihood: -108657.529146
EM: Round [59] log likelihood: -108657.521050
EM: Round [60] log likelihood: -108657.513011
EM: Round [61] log likelihood: -108657.505027
EM: Round [62] log likelihood: -108657.497097
EM: Round [63] log likelihood: -108657.489223
EM: Round [64] log likelihood: -108657.481402
EM: Round [65] log likelihood: -108657.473634
EM: Round [66] log likelihood: -108657.465920
EM: Round [67] log likelihood: -108657.458258
EM: Round [68] log likelihood: -108657.450648
EM: Round [69] log likelihood: -108657.443089
EM: Round [70] log likelihood: -108657.435581
EM: Round [71] log likelihood: -108657.428123
EM: Round [72] log likelihood: -108657.420716
EM: Round [73] log likelihood: -108657.413358
EM: Round [74] log likelihood: -108657.406050
EM: Round [75] log likelihood: -108657.398789
EM: Round [76] log likelihood: -108657.391578
EM: Round [77] log likelihood: -108657.384414
EM: Round [78] log likelihood: -108657.377297
EM: Round [79] log likelihood: -108657.370227
EM: Round [80] log likelihood: -108657.363204
EM: Round [81] log likelihood: -108657.356227
EM: Round [82] log likelihood: -108657.349295
EM: Round [83] log likelihood: -108657.342409
EM: Round [84] log likelihood: -108657.335568
EM: Round [85] log likelihood: -108657.328771
EM: Round [86] log likelihood: -108657.322019
EM: Round [87] log likelihood: -108657.315310
EM: Round [88] log likelihood: -108657.308644
EM: Round [89] log likelihood: -108657.302022
EM: Round [90] log likelihood: -108657.295441
EM: Round [91] log likelihood: -108657.288904
EM: Round [92] log likelihood: -108657.282408
EM: Round [93] log likelihood: -108657.275953
EM: Round [94] log likelihood: -108657.269540
EM: Round [95] log likelihood: -108657.263168
EM: Round [96] log likelihood: -108657.256836
EM: Round [97] log likelihood: -108657.250544
EM: Round [98] log likelihood: -108657.244292
EM: Round [99] log likelihood: -108657.238079
EM: Round [100] log likelihood: -108657.231906
EM: Round [101] log likelihood: -108657.225771
EM: Round [102] log likelihood: -108657.219675
EM: Round [103] log likelihood: -108657.213616
EM: Round [104] log likelihood: -108657.207596
EM: Round [105] log likelihood: -108657.201613
EM: Round [106] log likelihood: -108657.195668
EM: Round [107] log likelihood: -108657.189759
EM: Round [108] log likelihood: -108657.183887
EM: Round [109] log likelihood: -108657.178052
EM: Round [110] log likelihood: -108657.172252
EM: Round [111] log likelihood: -108657.166488
EM: Round [112] log likelihood: -108657.160760
EM: Round [113] log likelihood: -108657.155066
EM: Round [114] log likelihood: -108657.149408
EM: Round [115] log likelihood: -108657.143784
EM: Round [116] log likelihood: -108657.138194
EM: Round [117] log likelihood: -108657.132639
EM: Round [118] log likelihood: -108657.127117
EM: Round [119] log likelihood: -108657.121629
EM: Round [120] log likelihood: -108657.116174
EM: Round [121] log likelihood: -108657.110752
EM: Round [122] log likelihood: -108657.105363
EM: Round [123] log likelihood: -108657.100006
EM: Round [124] log likelihood: -108657.094681
EM: Round [125] log likelihood: -108657.089389
EM: Round [126] log likelihood: -108657.084128
EM: Round [127] log likelihood: -108657.078899
EM: Round [128] log likelihood: -108657.073700
EM: Round [129] log likelihood: -108657.068533
EM: Round [130] log likelihood: -108657.063397
EM: Round [131] log likelihood: -108657.058291
EM: Round [132] log likelihood: -108657.053215
EM: Round [133] log likelihood: -108657.048170
EM: Round [134] log likelihood: -108657.043154
EM: Round [135] log likelihood: -108657.038168
EM: Round [136] log likelihood: -108657.033211
EM: Round [137] log likelihood: -108657.028284
EM: Round [138] log likelihood: -108657.023385
EM: Round [139] log likelihood: -108657.018515
EM: Round [140] log likelihood: -108657.013673
EM: Round [141] log likelihood: -108657.008860
EM: Round [142] log likelihood: -108657.004075
EM: Round [143] log likelihood: -108656.999318
EM: Round [144] log likelihood: -108656.994589
EM: Round [145] log likelihood: -108656.989887
EM: Round [146] log likelihood: -108656.985212
EM: Round [147] log likelihood: -108656.980564
EM: Round [148] log likelihood: -108656.975943
EM: Round [149] log likelihood: -108656.971349
EM: Round [150] log likelihood: -108656.966781
EM: Round [151] log likelihood: -108656.962240
EM: Round [152] log likelihood: -108656.957725
EM: Round [153] log likelihood: -108656.953235
EM: Round [154] log likelihood: -108656.948771
EM: Round [155] log likelihood: -108656.944333
EM: Round [156] log likelihood: -108656.939920
EM: Round [157] log likelihood: -108656.935533
EM: Round [158] log likelihood: -108656.931170
EM: Round [159] log likelihood: -108656.926832
EM: Round [160] log likelihood: -108656.922519
EM: Round [161] log likelihood: -108656.918230
EM: Round [162] log likelihood: -108656.913966
EM: Round [163] log likelihood: -108656.909725
EM: Round [164] log likelihood: -108656.905509
EM: Round [165] log likelihood: -108656.901316
EM: Round [166] log likelihood: -108656.897147
EM: Round [167] log likelihood: -108656.893001
EM: Round [168] log likelihood: -108656.888879
EM: Round [169] log likelihood: -108656.884780
EM: Round [170] log likelihood: -108656.880703
EM: Round [171] log likelihood: -108656.876650
EM: Round [172] log likelihood: -108656.872619
EM: Round [173] log likelihood: -108656.868611
EM: Round [174] log likelihood: -108656.864625
EM: Round [175] log likelihood: -108656.860661
EM: Round [176] log likelihood: -108656.856719
EM: Round [177] log likelihood: -108656.852799
EM: Round [178] log likelihood: -108656.848900
EM: Round [179] log likelihood: -108656.845024
EM: Round [180] log likelihood: -108656.841168
EM: Round [181] log likelihood: -108656.837334
EM: Round [182] log likelihood: -108656.833521
EM: Round [183] log likelihood: -108656.829730
EM: Round [184] log likelihood: -108656.825959
EM: Round [185] log likelihood: -108656.822208
EM: Round [186] log likelihood: -108656.818478
EM: Round [187] log likelihood: -108656.814769
EM: Round [188] log likelihood: -108656.811080
EM: Round [189] log likelihood: -108656.807411
EM: Round [190] log likelihood: -108656.803762
EM: Round [191] log likelihood: -108656.800133
EM: Round [192] log likelihood: -108656.796524
EM: Round [193] log likelihood: -108656.792934
EM: Round [194] log likelihood: -108656.789364
EM: Round [195] log likelihood: -108656.785813
EM: Round [196] log likelihood: -108656.782282
EM: Round [197] log likelihood: -108656.778769
EM: Round [198] log likelihood: -108656.775276
EM: Round [199] log likelihood: -108656.771801
EM: Round [200] log likelihood: -108656.768345
EM: Round [201] log likelihood: -108656.764908
EM: Round [202] log likelihood: -108656.761490
EM: Round [203] log likelihood: -108656.758089
EM: Round [204] log likelihood: -108656.754707
EM: Round [205] log likelihood: -108656.751343
EM: Round [206] log likelihood: -108656.747997
EM: Round [207] log likelihood: -108656.744669
EM: Round [208] log likelihood: -108656.741359
EM: Round [209] log likelihood: -108656.738066
EM: Round [210] log likelihood: -108656.734791
EM: Round [211] log likelihood: -108656.731534
EM: Round [212] log likelihood: -108656.728293
EM: Round [213] log likelihood: -108656.725070
EM: Round [214] log likelihood: -108656.721864
EM: Round [215] log likelihood: -108656.718676
EM: Round [216] log likelihood: -108656.715504
EM: Round [217] log likelihood: -108656.712348
EM: Round [218] log likelihood: -108656.709210
EM: Round [219] log likelihood: -108656.706088
EM: Round [220] log likelihood: -108656.702982
EM: Round [221] log likelihood: -108656.699893
EM: Round [222] log likelihood: -108656.696820
EM: Round [223] log likelihood: -108656.693764
EM: Round [224] log likelihood: -108656.690723
EM: Round [225] log likelihood: -108656.687698
EM: Round [226] log likelihood: -108656.684689
EM: Round [227] log likelihood: -108656.681696
EM: Round [228] log likelihood: -108656.678719
EM: Round [229] log likelihood: -108656.675757
EM: Round [230] log likelihood: -108656.672811
EM: Round [231] log likelihood: -108656.669880
EM: Round [232] log likelihood: -108656.666964
EM: Round [233] log likelihood: -108656.664064
EM: Round [234] log likelihood: -108656.661178
EM: Round [235] log likelihood: -108656.658308
EM: Round [236] log likelihood: -108656.655452
EM: Round [237] log likelihood: -108656.652612
EM: Round [238] log likelihood: -108656.649786
EM: Round [239] log likelihood: -108656.646974
EM: Round [240] log likelihood: -108656.644178
EM: Round [241] log likelihood: -108656.641395
EM: Round [242] log likelihood: -108656.638627
EM: Round [243] log likelihood: -108656.635874
EM: Round [244] log likelihood: -108656.633134
EM: Round [245] log likelihood: -108656.630409
EM: Round [246] log likelihood: -108656.627697
EM: Round [247] log likelihood: -108656.625000
EM: Round [248] log likelihood: -108656.622316
EM: Round [249] log likelihood: -108656.619647
EM: Round [250] log likelihood: -108656.616990
EM: Round [251] log likelihood: -108656.614348
EM: Round [252] log likelihood: -108656.611719
EM: Round [253] log likelihood: -108656.609103
EM: Round [254] log likelihood: -108656.606501
EM: Round [255] log likelihood: -108656.603912
EM: Round [256] log likelihood: -108656.601337
EM: Round [257] log likelihood: -108656.598774
EM: Round [258] log likelihood: -108656.596225
EM: Round [259] log likelihood: -108656.593688
EM: Round [260] log likelihood: -108656.591164
EM: Round [261] log likelihood: -108656.588653
EM: Round [262] log likelihood: -108656.586155
EM: Round [263] log likelihood: -108656.583670
EM: Round [264] log likelihood: -108656.581197
EM: Round [265] log likelihood: -108656.578737
EM: Round [266] log likelihood: -108656.576289
EM: Round [267] log likelihood: -108656.573853
EM: Round [268] log likelihood: -108656.571430
EM: Round [269] log likelihood: -108656.569019
EM: Round [270] log likelihood: -108656.566620
EM: Round [271] log likelihood: -108656.564234
EM: Round [272] log likelihood: -108656.561859
EM: Round [273] log likelihood: -108656.559496
EM: Round [274] log likelihood: -108656.557145
EM: Round [275] log likelihood: -108656.554806
EM: Round [276] log likelihood: -108656.552479
EM: Round [277] log likelihood: -108656.550163
EM: Round [278] log likelihood: -108656.547859
EM: Round [279] log likelihood: -108656.545566
EM: Round [280] log likelihood: -108656.543285
EM: Round [281] log likelihood: -108656.541015
EM: Round [282] log likelihood: -108656.538757
EM: Round [283] log likelihood: -108656.536510
EM: Round [284] log likelihood: -108656.534274
EM: Round [285] log likelihood: -108656.532049
EM: Round [286] log likelihood: -108656.529835
EM: Round [287] log likelihood: -108656.527633
EM: Round [288] log likelihood: -108656.525441
EM: Round [289] log likelihood: -108656.523260
EM: Round [290] log likelihood: -108656.521090
EM: Round [291] log likelihood: -108656.518931
EM: Round [292] log likelihood: -108656.516783
EM: Round [293] log likelihood: -108656.514645
EM: Round [294] log likelihood: -108656.512517
EM: Round [295] log likelihood: -108656.510401
EM: Round [296] log likelihood: -108656.508294
EM: Round [297] log likelihood: -108656.506198
EM: Round [298] log likelihood: -108656.504113
EM: Round [299] log likelihood: -108656.502038
EM: Round [300] log likelihood: -108656.499973
EM: Round [301] log likelihood: -108656.497918
EM: Round [302] log likelihood: -108656.495873
EM: Round [303] log likelihood: -108656.493838
EM: Round [304] log likelihood: -108656.491814
EM: Round [305] log likelihood: -108656.489799
EM: Round [306] log likelihood: -108656.487794
EM: Round [307] log likelihood: -108656.485799
EM: Round [308] log likelihood: -108656.483814
EM: Round [309] log likelihood: -108656.481838
EM: Round [310] log likelihood: -108656.479873
EM: Round [311] log likelihood: -108656.477916
EM: Round [312] log likelihood: -108656.475970
EM: Round [313] log likelihood: -108656.474033
EM: Round [314] log likelihood: -108656.472105
EM: Round [315] log likelihood: -108656.470187
EM: Round [316] log likelihood: -108656.468278
EM: Round [317] log likelihood: -108656.466378
EM: Round [318] log likelihood: -108656.464488
EM: Round [319] log likelihood: -108656.462607
EM: Round [320] log likelihood: -108656.460735
EM: Round [321] log likelihood: -108656.458872
EM: Round [322] log likelihood: -108656.457018
EM: Round [323] log likelihood: -108656.455173
EM: Round [324] log likelihood: -108656.453338
EM: Round [325] log likelihood: -108656.451511
EM: Round [326] log likelihood: -108656.449693
EM: Round [327] log likelihood: -108656.447883
EM: Round [328] log likelihood: -108656.446083
EM: Round [329] log likelihood: -108656.444291
EM: Round [330] log likelihood: -108656.442508
EM: Round [331] log likelihood: -108656.440733
EM: Round [332] log likelihood: -108656.438967
EM: Round [333] log likelihood: -108656.437210
EM: Round [334] log likelihood: -108656.435461
EM: Round [335] log likelihood: -108656.433721
EM: Round [336] log likelihood: -108656.431988
EM: Round [337] log likelihood: -108656.430265
EM: Round [338] log likelihood: -108656.428549
EM: Round [339] log likelihood: -108656.426842
EM: Round [340] log likelihood: -108656.425143
EM: Round [341] log likelihood: -108656.423452
EM: Round [342] log likelihood: -108656.421769
EM: Round [343] log likelihood: -108656.420095
EM: Round [344] log likelihood: -108656.418428
EM: Round [345] log likelihood: -108656.416769
EM: Round [346] log likelihood: -108656.415119
EM: Round [347] log likelihood: -108656.413476
EM: Round [348] log likelihood: -108656.411841
EM: Round [349] log likelihood: -108656.410214
EM: Round [350] log likelihood: -108656.408595
EM: Round [351] log likelihood: -108656.406983
EM: Round [352] log likelihood: -108656.405379
EM: Round [353] log likelihood: -108656.403783
EM: Round [354] log likelihood: -108656.402194
EM: Round [355] log likelihood: -108656.400613
EM: Round [356] log likelihood: -108656.399040
EM: Round [357] log likelihood: -108656.397474
EM: Round [358] log likelihood: -108656.395915
EM: Round [359] log likelihood: -108656.394364
EM: Round [360] log likelihood: -108656.392821
EM: Round [361] log likelihood: -108656.391284
EM: Round [362] log likelihood: -108656.389755
EM: Round [363] log likelihood: -108656.388233
EM: Round [364] log likelihood: -108656.386719
EM: Round [365] log likelihood: -108656.385211
EM: Round [366] log likelihood: -108656.383711
EM: Round [367] log likelihood: -108656.382218
EM: Round [368] log likelihood: -108656.380732
EM: Round [369] log likelihood: -108656.379253
EM: Round [370] log likelihood: -108656.377781
EM: Round [371] log likelihood: -108656.376316
EM: Round [372] log likelihood: -108656.374857
EM: Round [373] log likelihood: -108656.373406
EM: Round [374] log likelihood: -108656.371962
EM: Round [375] log likelihood: -108656.370524
EM: Round [376] log likelihood: -108656.369093
EM: Round [377] log likelihood: -108656.367669
EM: Round [378] log likelihood: -108656.366252
EM: Round [379] log likelihood: -108656.364841
EM: Round [380] log likelihood: -108656.363437
EM: Round [381] log likelihood: -108656.362040
EM: Round [382] log likelihood: -108656.360649
EM: Round [383] log likelihood: -108656.359265
EM: Round [384] log likelihood: -108656.357887
EM: Round [385] log likelihood: -108656.356516
EM: Round [386] log likelihood: -108656.355151
EM: Round [387] log likelihood: -108656.353792
EM: Round [388] log likelihood: -108656.352440
EM: Round [389] log likelihood: -108656.351095
EM: Round [390] log likelihood: -108656.349755
EM: Round [391] log likelihood: -108656.348422
EM: Round [392] log likelihood: -108656.347095
EM: Round [393] log likelihood: -108656.345774
EM: Round [394] log likelihood: -108656.344460
EM: Round [395] log likelihood: -108656.343152
EM: Round [396] log likelihood: -108656.341849
EM: Round [397] log likelihood: -108656.340553
EM: Round [398] log likelihood: -108656.339263
EM: Round [399] log likelihood: -108656.337979
EM: Round [400] log likelihood: -108656.336701
EM: Round [401] log likelihood: -108656.335429
EM: Round [402] log likelihood: -108656.334163
EM: Round [403] log likelihood: -108656.332902
EM: Round [404] log likelihood: -108656.331648
EM: Round [405] log likelihood: -108656.330399
EM: Round [406] log likelihood: -108656.329157
EM: Round [407] log likelihood: -108656.327920
EM: Round [408] log likelihood: -108656.326688
EM: Round [409] log likelihood: -108656.325463
EM: Round [410] log likelihood: -108656.324243
EM: Round [411] log likelihood: -108656.323029
EM: Round [412] log likelihood: -108656.321821
EM: Round [413] log likelihood: -108656.320618
EM: Round [414] log likelihood: -108656.319420
EM: Round [415] log likelihood: -108656.318229
EM: Round [416] log likelihood: -108656.317042
EM: Round [417] log likelihood: -108656.315862
EM: Round [418] log likelihood: -108656.314687
EM: Round [419] log likelihood: -108656.313517
EM: Round [420] log likelihood: -108656.312352
EM: Round [421] log likelihood: -108656.311193
EM: Round [422] log likelihood: -108656.310040
EM: Round [423] log likelihood: -108656.308892
EM: Round [424] log likelihood: -108656.307749
EM: Round [425] log likelihood: -108656.306611
EM: Round [426] log likelihood: -108656.305478
EM: Round [427] log likelihood: -108656.304351
EM: Round [428] log likelihood: -108656.303229
EM: Round [429] log likelihood: -108656.302112
EM: Round [430] log likelihood: -108656.301001
EM: Round [431] log likelihood: -108656.299894
EM: Round [432] log likelihood: -108656.298793
EM: Round [433] log likelihood: -108656.297696
EM: Round [434] log likelihood: -108656.296605
EM: Round [435] log likelihood: -108656.295519
EM: Round [436] log likelihood: -108656.294438
EM: Round [437] log likelihood: -108656.293361
EM: Round [438] log likelihood: -108656.292290
EM: Round [439] log likelihood: -108656.291223
EM: Round [440] log likelihood: -108656.290162
EM: Round [441] log likelihood: -108656.289105
EM: Round [442] log likelihood: -108656.288053
EM: Round [443] log likelihood: -108656.287006
EM: Round [444] log likelihood: -108656.285964
EM: Round [445] log likelihood: -108656.284927
EM: Round [446] log likelihood: -108656.283894
EM: Round [447] log likelihood: -108656.282866
EM: Round [448] log likelihood: -108656.281843
EM: Round [449] log likelihood: -108656.280825
EM: Round [450] log likelihood: -108656.279811
EM: Round [451] log likelihood: -108656.278802
EM: Round [452] log likelihood: -108656.277797
EM: Round [453] log likelihood: -108656.276797
EM: Round [454] log likelihood: -108656.275802
EM: Round [455] log likelihood: -108656.274811
EM: Round [456] log likelihood: -108656.273825
EM: Round [457] log likelihood: -108656.272843
EM: Round [458] log likelihood: -108656.271865
EM: Round [459] log likelihood: -108656.270893
EM: Round [460] log likelihood: -108656.269924
EM: Round [461] log likelihood: -108656.268960
EM: Round [462] log likelihood: -108656.268001
EM: Round [463] log likelihood: -108656.267045
EM: Round [464] log likelihood: -108656.266094
EM: Round [465] log likelihood: -108656.265148
EM: Round [466] log likelihood: -108656.264206
EM: Round [467] log likelihood: -108656.263268
EM: Round [468] log likelihood: -108656.262334
EM: Round [469] log likelihood: -108656.261405
EM: Round [470] log likelihood: -108656.260480
EM: Round [471] log likelihood: -108656.259559
EM: Round [472] log likelihood: -108656.258642
EM: Round [473] log likelihood: -108656.257729
EM: Round [474] log likelihood: -108656.256821
EM: Round [475] log likelihood: -108656.255916
EM: Round [476] log likelihood: -108656.255016
EM: Round [477] log likelihood: -108656.254120
EM: Round [478] log likelihood: -108656.253228
EM: Round [479] log likelihood: -108656.252340
EM: Round [480] log likelihood: -108656.251456
EM: Round [481] log likelihood: -108656.250576
EM: Round [482] log likelihood: -108656.249700
EM: Round [483] log likelihood: -108656.248828
EM: Round [484] log likelihood: -108656.247960
EM: Round [485] log likelihood: -108656.247096
EM: Round [486] log likelihood: -108656.246235
EM: Round [487] log likelihood: -108656.245379
EM: Round [488] log likelihood: -108656.244527
EM: Round [489] log likelihood: -108656.243678
EM: Round [490] log likelihood: -108656.242833
EM: Round [491] log likelihood: -108656.241992
EM: Round [492] log likelihood: -108656.241155
EM: Round [493] log likelihood: -108656.240322
EM: Round [494] log likelihood: -108656.239492
EM: Round [495] log likelihood: -108656.238667
EM: Round [496] log likelihood: -108656.237844
EM: Round [497] log likelihood: -108656.237026
EM: Round [498] log likelihood: -108656.236211
EM: Round [499] log likelihood: -108656.235400
EM: Round [500] log likelihood: -108656.234593
EM: Round [501] log likelihood: -108656.233789
EM: Round [502] log likelihood: -108656.232989
EM: Round [503] log likelihood: -108656.232193
EM: Round [504] log likelihood: -108656.231400
EM: Round [505] log likelihood: -108656.230610
EM: Round [506] log likelihood: -108656.229825
EM: Round [507] log likelihood: -108656.229042
EM: Round [508] log likelihood: -108656.228264
EM: Round [509] log likelihood: -108656.227489
EM: Round [510] log likelihood: -108656.226717
EM: Round [511] log likelihood: -108656.225949
EM: Round [512] log likelihood: -108656.225184
EM: Round [513] log likelihood: -108656.224422
EM: Round [514] log likelihood: -108656.223665
EM: Round [515] log likelihood: -108656.222910
EM: Round [516] log likelihood: -108656.222159
EM: Round [517] log likelihood: -108656.221411
EM: Round [518] log likelihood: -108656.220667
EM: Round [519] log likelihood: -108656.219926
EM: Round [520] log likelihood: -108656.219188
EM: Round [521] log likelihood: -108656.218454
EM: Round [522] log likelihood: -108656.217722
EM: Round [523] log likelihood: -108656.216995
EM: Round [524] log likelihood: -108656.216270
EM: Round [525] log likelihood: -108656.215549
EM: Round [526] log likelihood: -108656.214831
EM: Round [527] log likelihood: -108656.214116
EM: Round [528] log likelihood: -108656.213404
EM: Round [529] log likelihood: -108656.212696
EM: Round [530] log likelihood: -108656.211990
EM: Round [531] log likelihood: -108656.211288
EM: Round [532] log likelihood: -108656.210589
EM: Round [533] log likelihood: -108656.209893
EM: Round [534] log likelihood: -108656.209200
EM: Round [535] log likelihood: -108656.208511
EM: Round [536] log likelihood: -108656.207824
EM: Round [537] log likelihood: -108656.207141
EM: Round [538] log likelihood: -108656.206460
EM: Round [539] log likelihood: -108656.205783
EM: Round [540] log likelihood: -108656.205108
EM: Round [541] log likelihood: -108656.204437
EM: Round [542] log likelihood: -108656.203768
EM: Round [543] log likelihood: -108656.203103
EM: Round [544] log likelihood: -108656.202441
EM: Round [545] log likelihood: -108656.201781
EM: Round [546] log likelihood: -108656.201125
EM: Round [547] log likelihood: -108656.200471
EM: Round [548] log likelihood: -108656.199820
EM: Round [549] log likelihood: -108656.199173
EM: Round [550] log likelihood: -108656.198528
EM: Round [551] log likelihood: -108656.197886
EM: Round [552] log likelihood: -108656.197246
EM: Round [553] log likelihood: -108656.196610
EM: Round [554] log likelihood: -108656.195977
EM: Round [555] log likelihood: -108656.195346
EM: Round [556] log likelihood: -108656.194718
EM: Round [557] log likelihood: -108656.194093
EM: Round [558] log likelihood: -108656.193471
EM: Round [559] log likelihood: -108656.192851
EM: Round [560] log likelihood: -108656.192234
EM: Round [561] log likelihood: -108656.191620
EM: Round [562] log likelihood: -108656.191009
EM: Round [563] log likelihood: -108656.190401
EM: Round [564] log likelihood: -108656.189795
EM: Round [565] log likelihood: -108656.189192
EM: Round [566] log likelihood: -108656.188591
EM: Round [567] log likelihood: -108656.187993
EM: Round [568] log likelihood: -108656.187398
EM: Round [569] log likelihood: -108656.186806
EM: Round [570] log likelihood: -108656.186216
EM: Round [571] log likelihood: -108656.185628
EM: Round [572] log likelihood: -108656.185044
EM: Round [573] log likelihood: -108656.184462
EM: Round [574] log likelihood: -108656.183882
EM: Round [575] log likelihood: -108656.183305
EM: Round [576] log likelihood: -108656.182731
EM: Round [577] log likelihood: -108656.182159
EM: Round [578] log likelihood: -108656.181590
EM: Round [579] log likelihood: -108656.181023
EM: Round [580] log likelihood: -108656.180459
EM: Round [581] log likelihood: -108656.179897
EM: Round [582] log likelihood: -108656.179338
EM: Round [583] log likelihood: -108656.178781
EM: Round [584] log likelihood: -108656.178227
EM: Round [585] log likelihood: -108656.177675
EM: Round [586] log likelihood: -108656.177125
EM: Round [587] log likelihood: -108656.176578
EM: Round [588] log likelihood: -108656.176034
EM: Round [589] log likelihood: -108656.175492
EM: Round [590] log likelihood: -108656.174952
EM: Round [591] log likelihood: -108656.174414
EM: Round [592] log likelihood: -108656.173879
EM: Round [593] log likelihood: -108656.173347
EM: Round [594] log likelihood: -108656.172817
EM: Round [595] log likelihood: -108656.172289
EM: Round [596] log likelihood: -108656.171763
EM: Round [597] log likelihood: -108656.171240
EM: Round [598] log likelihood: -108656.170719
EM: Round [599] log likelihood: -108656.170200
EM: Round [600] log likelihood: -108656.169684
EM: Round [601] log likelihood: -108656.169170
EM: Round [602] log likelihood: -108656.168658
EM: Round [603] log likelihood: -108656.168148
EM: Round [604] log likelihood: -108656.167641
EM: Round [605] log likelihood: -108656.167136
EM: Round [606] log likelihood: -108656.166633
EM: Round [607] log likelihood: -108656.166132
EM: Round [608] log likelihood: -108656.165634
EM: Round [609] log likelihood: -108656.165138
EM: Round [610] log likelihood: -108656.164643
EM: Round [611] log likelihood: -108656.164152
EM: Round [612] log likelihood: -108656.163662
EM: Round [613] log likelihood: -108656.163174
EM: Round [614] log likelihood: -108656.162689
EM: Round [615] log likelihood: -108656.162206
EM: Round [616] log likelihood: -108656.161725
EM: Round [617] log likelihood: -108656.161245
EM: Round [618] log likelihood: -108656.160769
EM: Round [619] log likelihood: -108656.160294
EM: Round [620] log likelihood: -108656.159821
EM: Round [621] log likelihood: -108656.159350
EM: Round [622] log likelihood: -108656.158882
EM: Round [623] log likelihood: -108656.158415
EM: Round [624] log likelihood: -108656.157951
EM: Round [625] log likelihood: -108656.157488
EM: Round [626] log likelihood: -108656.157028
EM: Round [627] log likelihood: -108656.156570
EM: Round [628] log likelihood: -108656.156113
EM: Round [629] log likelihood: -108656.155659
EM: Round [630] log likelihood: -108656.155207
EM: Round [631] log likelihood: -108656.154756
EM: Round [632] log likelihood: -108656.154308
EM: Round [633] log likelihood: -108656.153861
EM: Round [634] log likelihood: -108656.153417
EM: Round [635] log likelihood: -108656.152975
EM: Round [636] log likelihood: -108656.152534
EM: Round [637] log likelihood: -108656.152095
EM: Round [638] log likelihood: -108656.151659
EM: Round [639] log likelihood: -108656.151224
EM: Round [640] log likelihood: -108656.150791
EM: Round [641] log likelihood: -108656.150360
EM: Round [642] log likelihood: -108656.149931
EM: Round [643] log likelihood: -108656.149504
EM: Round [644] log likelihood: -108656.149078
EM: Round [645] log likelihood: -108656.148655
EM: Round [646] log likelihood: -108656.148233
EM: Round [647] log likelihood: -108656.147814
EM: Round [648] log likelihood: -108656.147396
EM: Round [649] log likelihood: -108656.146980
EM: Round [650] log likelihood: -108656.146565
EM: Round [651] log likelihood: -108656.146153
EM: Round [652] log likelihood: -108656.145742
EM: Round [653] log likelihood: -108656.145333
EM: Round [654] log likelihood: -108656.144926
EM: Round [655] log likelihood: -108656.144521
EM: Round [656] log likelihood: -108656.144117
EM: Round [657] log likelihood: -108656.143716
EM: Round [658] log likelihood: -108656.143316
EM: Round [659] log likelihood: -108656.142918
EM: Round [660] log likelihood: -108656.142521
EM: Round [661] log likelihood: -108656.142126
EM: Round [662] log likelihood: -108656.141733
EM: Round [663] log likelihood: -108656.141342
EM: Round [664] log likelihood: -108656.140952
EM: Round [665] log likelihood: -108656.140565
EM: Round [666] log likelihood: -108656.140178
EM: Round [667] log likelihood: -108656.139794
EM: Round [668] log likelihood: -108656.139411
EM: Round [669] log likelihood: -108656.139030
EM: Round [670] log likelihood: -108656.138650
EM: Round [671] log likelihood: -108656.138273
EM: Round [672] log likelihood: -108656.137896
EM: Round [673] log likelihood: -108656.137522
EM: Round [674] log likelihood: -108656.137149
EM: Round [675] log likelihood: -108656.136778
EM: Round [676] log likelihood: -108656.136408
EM: Round [677] log likelihood: -108656.136040
EM: Round [678] log likelihood: -108656.135673
EM: Round [679] log likelihood: -108656.135309
EM: Round [680] log likelihood: -108656.134945
EM: Round [681] log likelihood: -108656.134584
EM: Round [682] log likelihood: -108656.134224
EM: Round [683] log likelihood: -108656.133865
EM: Round [684] log likelihood: -108656.133508
EM: Round [685] log likelihood: -108656.133153
EM: Round [686] log likelihood: -108656.132799
EM: Round [687] log likelihood: -108656.132447
EM: Round [688] log likelihood: -108656.132096
EM: Round [689] log likelihood: -108656.131747
EM: Round [690] log likelihood: -108656.131399
EM: Round [691] log likelihood: -108656.131053
EM: Round [692] log likelihood: -108656.130708
EM: Round [693] log likelihood: -108656.130365
EM: Round [694] log likelihood: -108656.130023
EM: Round [695] log likelihood: -108656.129683
EM: Round [696] log likelihood: -108656.129344
EM: Round [697] log likelihood: -108656.129007
EM: Round [698] log likelihood: -108656.128671
EM: Round [699] log likelihood: -108656.128337
EM: Round [700] log likelihood: -108656.128004
EM: Round [701] log likelihood: -108656.127673
EM: Round [702] log likelihood: -108656.127343
EM: Round [703] log likelihood: -108656.127014
EM: Round [704] log likelihood: -108656.126687
EM: Round [705] log likelihood: -108656.126362
EM: Round [706] log likelihood: -108656.126037
EM: Round [707] log likelihood: -108656.125714
EM: Round [708] log likelihood: -108656.125393
EM: Round [709] log likelihood: -108656.125073
EM: Round [710] log likelihood: -108656.124754
EM: Round [711] log likelihood: -108656.124437
EM: Round [712] log likelihood: -108656.124121
EM: Round [713] log likelihood: -108656.123807
EM: Round [714] log likelihood: -108656.123494
EM: Round [715] log likelihood: -108656.123182
EM: Round [716] log likelihood: -108656.122871
EM: Round [717] log likelihood: -108656.122562
EM: Round [718] log likelihood: -108656.122255
EM: Round [719] log likelihood: -108656.121948
EM: Round [720] log likelihood: -108656.121643
EM: Round [721] log likelihood: -108656.121339
EM: Round [722] log likelihood: -108656.121037
EM: Round [723] log likelihood: -108656.120736
EM: Round [724] log likelihood: -108656.120436
EM: Round [725] log likelihood: -108656.120138
EM: Round [726] log likelihood: -108656.119840
EM: Round [727] log likelihood: -108656.119544
EM: Round [728] log likelihood: -108656.119250
EM: Round [729] log likelihood: -108656.118956
EM: Round [730] log likelihood: -108656.118664
EM: Round [731] log likelihood: -108656.118374
EM: Round [732] log likelihood: -108656.118084
EM: Round [733] log likelihood: -108656.117796
EM: Round [734] log likelihood: -108656.117509
EM: Round [735] log likelihood: -108656.117223
EM: Round [736] log likelihood: -108656.116938
EM: Round [737] log likelihood: -108656.116655
EM: Round [738] log likelihood: -108656.116373
EM: Round [739] log likelihood: -108656.116092
EM: Round [740] log likelihood: -108656.115812
EM: Round [741] log likelihood: -108656.115534
EM: Round [742] log likelihood: -108656.115257
EM: Round [743] log likelihood: -108656.114981
EM: Round [744] log likelihood: -108656.114706
EM: Round [745] log likelihood: -108656.114432
EM: Round [746] log likelihood: -108656.114160
EM: Round [747] log likelihood: -108656.113889
EM: Round [748] log likelihood: -108656.113618
EM: Round [749] log likelihood: -108656.113349
EM: Round [750] log likelihood: -108656.113082
EM: Round [751] log likelihood: -108656.112815
EM: Round [752] log likelihood: -108656.112550
EM: Round [753] log likelihood: -108656.112285
EM: Round [754] log likelihood: -108656.112022
EM: Round [755] log likelihood: -108656.111760
EM: Round [756] log likelihood: -108656.111499
EM: Round [757] log likelihood: -108656.111240
EM: Round [758] log likelihood: -108656.110981
EM: Round [759] log likelihood: -108656.110723
EM: Round [760] log likelihood: -108656.110467
EM: Round [761] log likelihood: -108656.110212
EM: Round [762] log likelihood: -108656.109958
EM: Round [763] log likelihood: -108656.109705
EM: Round [764] log likelihood: -108656.109453
EM: Round [765] log likelihood: -108656.109202
EM: Round [766] log likelihood: -108656.108952
EM: Round [767] log likelihood: -108656.108703
EM: Round [768] log likelihood: -108656.108455
EM: Round [769] log likelihood: -108656.108209
EM: Round [770] log likelihood: -108656.107963
EM: Round [771] log likelihood: -108656.107719
EM: Round [772] log likelihood: -108656.107476
EM: Round [773] log likelihood: -108656.107233
EM: Round [774] log likelihood: -108656.106992
EM: Round [775] log likelihood: -108656.106752
EM: Round [776] log likelihood: -108656.106512
EM: Round [777] log likelihood: -108656.106274
EM: Round [778] log likelihood: -108656.106037
EM: Round [779] log likelihood: -108656.105801
EM: Round [780] log likelihood: -108656.105566
EM: Round [781] log likelihood: -108656.105332
EM: Round [782] log likelihood: -108656.105099
EM: Round [783] log likelihood: -108656.104867
EM: Round [784] log likelihood: -108656.104636
EM: Round [785] log likelihood: -108656.104406
EM: Round [786] log likelihood: -108656.104176
EM: Round [787] log likelihood: -108656.103948
EM: Round [788] log likelihood: -108656.103721
EM: Round [789] log likelihood: -108656.103495
EM: Round [790] log likelihood: -108656.103270
EM: Round [791] log likelihood: -108656.103046
EM: Round [792] log likelihood: -108656.102823
EM: Round [793] log likelihood: -108656.102600
EM: Round [794] log likelihood: -108656.102379
EM: Round [795] log likelihood: -108656.102159
EM: Round [796] log likelihood: -108656.101939
EM: Round [797] log likelihood: -108656.101721
EM: Round [798] log likelihood: -108656.101504
EM: Round [799] log likelihood: -108656.101287
EM: Round [800] log likelihood: -108656.101071
EM: Round [801] log likelihood: -108656.100857
EM: Round [802] log likelihood: -108656.100643
EM: Round [803] log likelihood: -108656.100430
EM: Round [804] log likelihood: -108656.100218
EM: Round [805] log likelihood: -108656.100007
EM: Round [806] log likelihood: -108656.099797
EM: Round [807] log likelihood: -108656.099588
EM: Round [808] log likelihood: -108656.099380
EM: Round [809] log likelihood: -108656.099172
EM: Round [810] log likelihood: -108656.098966
EM: Round [811] log likelihood: -108656.098760
EM: Round [812] log likelihood: -108656.098556
EM: Round [813] log likelihood: -108656.098352
EM: Round [814] log likelihood: -108656.098149
EM: Round [815] log likelihood: -108656.097947
EM: Round [816] log likelihood: -108656.097745
EM: Round [817] log likelihood: -108656.097545
EM: Round [818] log likelihood: -108656.097346
EM: Round [819] log likelihood: -108656.097147
EM: Round [820] log likelihood: -108656.096949
EM: Round [821] log likelihood: -108656.096752
EM: Round [822] log likelihood: -108656.096556
EM: Round [823] log likelihood: -108656.096361
EM: Round [824] log likelihood: -108656.096167
EM: Round [825] log likelihood: -108656.095973
EM: Round [826] log likelihood: -108656.095780
EM: Round [827] log likelihood: -108656.095589
EM: Round [828] log likelihood: -108656.095398
EM: Round [829] log likelihood: -108656.095207
EM: Round [830] log likelihood: -108656.095018
EM: Round [831] log likelihood: -108656.094829
EM: Round [832] log likelihood: -108656.094642
EM: Round [833] log likelihood: -108656.094455
EM: Round [834] log likelihood: -108656.094268
EM: Round [835] log likelihood: -108656.094083
EM: Round [836] log likelihood: -108656.093899
EM: Round [837] log likelihood: -108656.093715
EM: Round [838] log likelihood: -108656.093532
EM: Round [839] log likelihood: -108656.093350
EM: Round [840] log likelihood: -108656.093168
EM: Round [841] log likelihood: -108656.092988
EM: Round [842] log likelihood: -108656.092808
EM: Round [843] log likelihood: -108656.092629
EM: Round [844] log likelihood: -108656.092450
EM: Round [845] log likelihood: -108656.092273
EM: Round [846] log likelihood: -108656.092096
EM: Round [847] log likelihood: -108656.091920
EM: Round [848] log likelihood: -108656.091745
EM: Round [849] log likelihood: -108656.091570
EM: Round [850] log likelihood: -108656.091396
EM: Round [851] log likelihood: -108656.091223
EM: Round [852] log likelihood: -108656.091051
EM: Round [853] log likelihood: -108656.090880
EM: Round [854] log likelihood: -108656.090709
EM: Round [855] log likelihood: -108656.090539
EM: Round [856] log likelihood: -108656.090370
EM: Round [857] log likelihood: -108656.090201
EM: Round [858] log likelihood: -108656.090033
EM: Round [859] log likelihood: -108656.089866
EM: Round [860] log likelihood: -108656.089700
EM: Round [861] log likelihood: -108656.089534
EM: Round [862] log likelihood: -108656.089369
EM: Round [863] log likelihood: -108656.089205
EM: Round [864] log likelihood: -108656.089041
EM: Round [865] log likelihood: -108656.088878
EM: Round [866] log likelihood: -108656.088716
EM: Round [867] log likelihood: -108656.088554
EM: Round [868] log likelihood: -108656.088394
EM: Round [869] log likelihood: -108656.088234
EM: Round [870] log likelihood: -108656.088074
EM: Round [871] log likelihood: -108656.087915
EM: Round [872] log likelihood: -108656.087757
EM: Round [873] log likelihood: -108656.087600
EM: Round [874] log likelihood: -108656.087443
EM: Round [875] log likelihood: -108656.087287
EM: Round [876] log likelihood: -108656.087132
EM: Round [877] log likelihood: -108656.086977
EM: Round [878] log likelihood: -108656.086823
EM: Round [879] log likelihood: -108656.086670
EM: Round [880] log likelihood: -108656.086517
EM: Round [881] log likelihood: -108656.086365
EM: Round [882] log likelihood: -108656.086214
EM: Round [883] log likelihood: -108656.086063
EM: Round [884] log likelihood: -108656.085913
EM: Round [885] log likelihood: -108656.085764
EM: Round [886] log likelihood: -108656.085615
EM: Round [887] log likelihood: -108656.085467
EM: Round [888] log likelihood: -108656.085319
EM: Round [889] log likelihood: -108656.085172
EM: Round [890] log likelihood: -108656.085026
EM: Round [891] log likelihood: -108656.084880
EM: Round [892] log likelihood: -108656.084735
EM: Round [893] log likelihood: -108656.084591
EM: Round [894] log likelihood: -108656.084447
EM: Round [895] log likelihood: -108656.084304
EM: Round [896] log likelihood: -108656.084161
EM: Round [897] log likelihood: -108656.084020
EM: Round [898] log likelihood: -108656.083878
EM: Round [899] log likelihood: -108656.083737
EM: Round [900] log likelihood: -108656.083597
EM: Round [901] log likelihood: -108656.083458
EM: Round [902] log likelihood: -108656.083319
EM: Round [903] log likelihood: -108656.083181
EM: Round [904] log likelihood: -108656.083043
EM: Round [905] log likelihood: -108656.082906
EM: Round [906] log likelihood: -108656.082769
EM: Round [907] log likelihood: -108656.082633
EM: Round [908] log likelihood: -108656.082498
EM: Round [909] log likelihood: -108656.082363
EM: Round [910] log likelihood: -108656.082229
EM: Round [911] log likelihood: -108656.082095
EM: Round [912] log likelihood: -108656.081962
EM: Round [913] log likelihood: -108656.081830
EM: Round [914] log likelihood: -108656.081698
EM: Round [915] log likelihood: -108656.081566
EM: Round [916] log likelihood: -108656.081436
EM: Round [917] log likelihood: -108656.081305
EM: Round [918] log likelihood: -108656.081176
EM: Round [919] log likelihood: -108656.081047
EM: Round [920] log likelihood: -108656.080918
EM: Round [921] log likelihood: -108656.080790
EM: Round [922] log likelihood: -108656.080663
EM: Round [923] log likelihood: -108656.080536
EM: Round [924] log likelihood: -108656.080409
EM: Round [925] log likelihood: -108656.080283
EM: Round [926] log likelihood: -108656.080158
EM: Round [927] log likelihood: -108656.080033
EM: Round [928] log likelihood: -108656.079909
EM: Round [929] log likelihood: -108656.079785
EM: Round [930] log likelihood: -108656.079662
EM: Round [931] log likelihood: -108656.079540
EM: Round [932] log likelihood: -108656.079418
EM: Round [933] log likelihood: -108656.079296
EM: Round [934] log likelihood: -108656.079175
EM: Round [935] log likelihood: -108656.079054
EM: Round [936] log likelihood: -108656.078934
EM: Round [937] log likelihood: -108656.078815
EM: Round [938] log likelihood: -108656.078696
EM: Round [939] log likelihood: -108656.078577
EM: Round [940] log likelihood: -108656.078459
EM: Round [941] log likelihood: -108656.078342
EM: Round [942] log likelihood: -108656.078225
EM: Round [943] log likelihood: -108656.078108
EM: Round [944] log likelihood: -108656.077992
EM: Round [945] log likelihood: -108656.077877
EM: Round [946] log likelihood: -108656.077762
EM: Round [947] log likelihood: -108656.077647
EM: Round [948] log likelihood: -108656.077533
EM: Round [949] log likelihood: -108656.077420
EM: Round [950] log likelihood: -108656.077307
EM: Round [951] log likelihood: -108656.077194
EM: Round [952] log likelihood: -108656.077082
EM: Round [953] log likelihood: -108656.076971
EM: Round [954] log likelihood: -108656.076860
EM: Round [955] log likelihood: -108656.076749
EM: Round [956] log likelihood: -108656.076639
EM: Round [957] log likelihood: -108656.076529
EM: Round [958] log likelihood: -108656.076420
EM: Round [959] log likelihood: -108656.076311
EM: Round [960] log likelihood: -108656.076203
EM: Round [961] log likelihood: -108656.076095
EM: Round [962] log likelihood: -108656.075988
EM: Round [963] log likelihood: -108656.075881
EM: Round [964] log likelihood: -108656.075774
EM: Round [965] log likelihood: -108656.075668
EM: Round [966] log likelihood: -108656.075563
EM: Round [967] log likelihood: -108656.075458
EM: Round [968] log likelihood: -108656.075353
EM: Round [969] log likelihood: -108656.075249
EM: Round [970] log likelihood: -108656.075145
EM: Round [971] log likelihood: -108656.075042
EM: Round [972] log likelihood: -108656.074939
EM: Round [973] log likelihood: -108656.074836
EM: Round [974] log likelihood: -108656.074735
EM: Round [975] log likelihood: -108656.074633
EM: Round [976] log likelihood: -108656.074532
EM: Round [977] log likelihood: -108656.074431
EM: Round [978] log likelihood: -108656.074331
EM: Round [979] log likelihood: -108656.074231
EM: Stopping iterations at round 979 due to insufficient improvement in likelihood.
Execution Time = 0.02 minutes. CMD: /usr/local/src/STAR-Fusion/FusionInspector/util/fusion_EM_runner.pl /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.post_blast_and_promiscuity_filter.annot_filter.pass > /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.post_blast_and_promiscuity_filter.annot_filter.pass.EMadj
Running: touch /tmp/nxf.97TVOzPwtG/chckpts_dir/EM_adj_counts.ok
Running: /usr/local/src/STAR-Fusion/FusionInspector/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1_1.fastp.fastq.gz /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.post_blast_and_promiscuity_filter.annot_filter.pass.EMadj > /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.post_blast_and_promiscuity_filter.annot_filter.pass.EMadj.FFPM
-total frags in /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1_1.fastp.fastq.gz: 296071600
Execution Time = 6.00 minutes. CMD: /usr/local/src/STAR-Fusion/FusionInspector/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1_1.fastp.fastq.gz /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.post_blast_and_promiscuity_filter.annot_filter.pass.EMadj > /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.post_blast_and_promiscuity_filter.annot_filter.pass.EMadj.FFPM
Running: touch /tmp/nxf.97TVOzPwtG/chckpts_dir/add_FFPM.ok
Running: /usr/local/src/STAR-Fusion/FusionInspector/util/misc/find_microhomologies_by_kmer_matches.pl --fasta /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.fa --gtf /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.gtf > /tmp/nxf.97TVOzPwtG/fi_workdir/microH.dat
Execution Time = 0.01 minutes. CMD: /usr/local/src/STAR-Fusion/FusionInspector/util/misc/find_microhomologies_by_kmer_matches.pl --fasta /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.fa --gtf /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.gtf > /tmp/nxf.97TVOzPwtG/fi_workdir/microH.dat
Running: touch /tmp/nxf.97TVOzPwtG/chckpts_dir/microH.dat.ok
Running: /usr/local/src/STAR-Fusion/FusionInspector/util/misc/append_microH_distance.py /tmp/nxf.97TVOzPwtG/fi_workdir/microH.dat /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.post_blast_and_promiscuity_filter.annot_filter.pass.EMadj.FFPM > /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.post_blast_and_promiscuity_filter.annot_filter.pass.EMadj.FFPM.wMicroH
Execution Time = 0.01 minutes. CMD: /usr/local/src/STAR-Fusion/FusionInspector/util/misc/append_microH_distance.py /tmp/nxf.97TVOzPwtG/fi_workdir/microH.dat /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.post_blast_and_promiscuity_filter.annot_filter.pass.EMadj.FFPM > /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.post_blast_and_promiscuity_filter.annot_filter.pass.EMadj.FFPM.wMicroH
Running: touch /tmp/nxf.97TVOzPwtG/chckpts_dir/append_microH_info.ok
Running: cp /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.post_blast_and_promiscuity_filter.annot_filter.pass.EMadj.FFPM.wMicroH /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.FusionInspector.fusions.tsv
Execution Time = 0.00 minutes. CMD: cp /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.post_blast_and_promiscuity_filter.annot_filter.pass.EMadj.FFPM.wMicroH /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.FusionInspector.fusions.tsv
Running: touch /tmp/nxf.97TVOzPwtG/chckpts_dir/cp_final.ok
Running: /usr/local/src/STAR-Fusion/FusionInspector/util/column_exclusions.pl /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.FusionInspector.fusions.tsv JunctionReads,SpanningFrags,CounterFusionLeftReads,CounterFusionRightReads > /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.FusionInspector.fusions.abridged.tsv
Execution Time = 0.00 minutes. CMD: /usr/local/src/STAR-Fusion/FusionInspector/util/column_exclusions.pl /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.FusionInspector.fusions.tsv JunctionReads,SpanningFrags,CounterFusionLeftReads,CounterFusionRightReads > /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.FusionInspector.fusions.abridged.tsv
Running: touch /tmp/nxf.97TVOzPwtG/chckpts_dir/final.abridged.ok
Running: /usr/local/src/STAR-Fusion/FusionInspector/util/create_fusion_inspector_igvjs.py --fusion_inspector_directory /tmp/nxf.97TVOzPwtG --json_outfile /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.fusion_inspector_web.json --file_prefix 659_dfA-T1-TRNA-1_B23MHV2LT4_1
Execution Time = 0.00 minutes. CMD: /usr/local/src/STAR-Fusion/FusionInspector/util/create_fusion_inspector_igvjs.py --fusion_inspector_directory /tmp/nxf.97TVOzPwtG --json_outfile /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.fusion_inspector_web.json --file_prefix 659_dfA-T1-TRNA-1_B23MHV2LT4_1
Running: touch /tmp/nxf.97TVOzPwtG/chckpts_dir/create_fi_igvjs.ok
Running: /usr/local/src/STAR-Fusion/FusionInspector/fusion-reports/create_fusion_report.py --html_template /usr/local/src/STAR-Fusion/FusionInspector/util/fusion_report_html_template/igvjs_fusion.html --fusions_json /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.fusion_inspector_web.json --input_file_prefix 659_dfA-T1-TRNA-1_B23MHV2LT4_1 --html_output /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.fusion_inspector_web.html
Warning - not locating file: /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.gmap_trinity_GG.fusions.gff3.bed
Execution Time = 0.06 minutes. CMD: /usr/local/src/STAR-Fusion/FusionInspector/fusion-reports/create_fusion_report.py --html_template /usr/local/src/STAR-Fusion/FusionInspector/util/fusion_report_html_template/igvjs_fusion.html --fusions_json /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.fusion_inspector_web.json --input_file_prefix 659_dfA-T1-TRNA-1_B23MHV2LT4_1 --html_output /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.fusion_inspector_web.html
Running: touch /tmp/nxf.97TVOzPwtG/chckpts_dir/fusion_reports_html.ok
Running: /usr/local/src/STAR-Fusion/FusionInspector/FusionAnnotator/FusionAnnotator --annotate /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.FusionInspector.fusions.abridged.tsv --genome_lib_dir /tmp/nxf.97TVOzPwtG/ctat_genome_lib_build_dir > /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.FusionInspector.fusions.abridged.tsv.annotated
Execution Time = 0.00 minutes. CMD: /usr/local/src/STAR-Fusion/FusionInspector/FusionAnnotator/FusionAnnotator --annotate /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.FusionInspector.fusions.abridged.tsv --genome_lib_dir /tmp/nxf.97TVOzPwtG/ctat_genome_lib_build_dir > /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.FusionInspector.fusions.abridged.tsv.annotated
Running: touch /tmp/nxf.97TVOzPwtG/chckpts_dir/fusion_annotator.ok
Running: /usr/local/src/STAR-Fusion/FusionInspector/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.FusionInspector.fusions.abridged.tsv.annotated --genome_lib_dir /tmp/nxf.97TVOzPwtG/ctat_genome_lib_build_dir > /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.FusionInspector.fusions.abridged.tsv.annotated.coding_effect
WARNING, no entry stored in dbm for [ENSG00000280136.2]
WARNING, no entry stored in dbm for [ENSG00000280136.2]
WARNING, no entry stored in dbm for [ENSG00000272655.2]
WARNING, no entry stored in dbm for [ENSG00000272655.2]
WARNING, no entry stored in dbm for [ENSG00000272655.2]
WARNING, no entry stored in dbm for [ENSG00000272655.2]
WARNING, no entry stored in dbm for [ENSG00000282057.1]
WARNING, no entry stored in dbm for [ENSG00000282057.1]
WARNING, no entry stored in dbm for [ENSG00000282057.1]
WARNING, no entry stored in dbm for [ENSG00000282057.1]
WARNING, no entry stored in dbm for [ENSG00000280136.2]
WARNING, no entry stored in dbm for [ENSG00000267523.1]
WARNING, no entry stored in dbm for [ENSG00000267523.1]
WARNING, no entry stored in dbm for [ENSG00000226049.3]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000286030.2]
WARNING, no entry stored in dbm for [ENSG00000286030.2]
WARNING, no entry stored in dbm for [ENSG00000286065.2]
WARNING, no entry stored in dbm for [ENSG00000286030.2]
WARNING, no entry stored in dbm for [ENSG00000068781.21]
WARNING, no entry stored in dbm for [ENSG00000227765.4]
Execution Time = 0.01 minutes. CMD: /usr/local/src/STAR-Fusion/FusionInspector/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.FusionInspector.fusions.abridged.tsv.annotated --genome_lib_dir /tmp/nxf.97TVOzPwtG/ctat_genome_lib_build_dir > /tmp/nxf.97TVOzPwtG/659_dfA-T1-TRNA-1_B23MHV2LT4_1.FusionInspector.fusions.abridged.tsv.annotated.coding_effect
Running: touch /tmp/nxf.97TVOzPwtG/chckpts_dir/fusion_coding_region_effect.ok
ls: cannot access 'IGV_inputs': No such file or directory