Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1b/bc5a4f615aa1923b679971bfb5f1fe/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c0/5e65ebfa278dc27d0fda5681711142/659_ciJ-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1b/bc5a4f615aa1923b679971bfb5f1fe/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory
ls: *.crai: No such file or directory