Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/61/2f40320114ad44d83f0da0076fe1fb/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/61/2f40320114ad44d83f0da0076fe1fb/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/38/dfac22f506d88f7b885fac0d44b73e/659_bTq-T1-TRNA-1_B23MHV2LT4_1_R1.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/38/dfac22f506d88f7b885fac0d44b73e/659_bTq-T1-TRNA-1_B23MHV2LT4_1_R2.fastq.gz
==> STAGING COMPLETE (4 inputs)

ls: *.fail.fastq.gz: No such file or directory
ls: *.merged.fastq.gz: No such file or directory