Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/cd/f152c5c274986786d913ee48fdc3fb/659_dXa-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/61/50be9b24fb12299ab59bef92bf5101/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/61/50be9b24fb12299ab59bef92bf5101/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory
ls: *.crai: No such file or directory