Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/aa/b23ac068f2b3ccda0aae5b11a47f7b/659_On-T1-TRNA-2_B23MHV2LT4_1.star_alignment.Aligned.sortedByCoord.out.cram
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a0/aa5866ccb235a3922ef07e91eb50d7/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a0/aa5866ccb235a3922ef07e91eb50d7/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.bai: No such file or directory
ls: *.csi: No such file or directory