Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4d/e40008d69c2355cfa084490e79a37b/659_bKP-T1-TRNA-1_B23MHV2LT4_1.star_alignment.Aligned.sortedByCoord.out.cram
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/16/d7f3d289cab2ed2277a8e0b43f9f2c/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/16/d7f3d289cab2ed2277a8e0b43f9f2c/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.bai: No such file or directory
ls: *.csi: No such file or directory