Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/03/47aaa4e755a6c377dac79a00c9d6fe/659_b4x-T1-TRNA-1_B23MHV2LT4_1
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/49/7cb8bf1d129855f94d918729c1cdd5/659_b4x-T1-TRNA-1_B23MHV2LT4_1.sample_qc.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/cf/6739c807834b6ab78892216703dab6/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/cf/6739c807834b6ab78892216703dab6/.command.run
==> STAGING COMPLETE (4 inputs)

Processing Kallisto file: 659_b4x-T1-TRNA-1_B23MHV2LT4_1/abundance.h5
Successfully converted 659_b4x-T1-TRNA-1_B23MHV2LT4_1/abundance.h5 to 659_b4x-T1-TRNA-1_B23MHV2LT4_1_kallisto_mqc.tsv
  Sample: 659_b4x-T1-TRNA-1_B23MHV2LT4_1
  Mean Fragment Length: 109.7 bp
  Median Fragment Length: 106.0 bp
  pct_mito_est_counts: 0.011%
  pct_ribo_est_counts: 0.847%
  pct_hk_est_counts: 0.401%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.022%
  pct_ribo_tpm: 2.565%
  pct_hk_tpm: 0.651%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 5.669%