Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/99/59b4a286e2825476dabd8d6aef2770/659_bUW-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/39/b9732f40d38e9ff7c93f5679109ef4/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/39/b9732f40d38e9ff7c93f5679109ef4/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory
ls: *.crai: No such file or directory