AIH curated blacklist: matched 5 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 273
Pass (FILTER=PASS): 24 (8.8%)
Fail (FILTER=FAIL): 249 (91.2%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 5
All 5 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 39
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 32
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 24
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 22
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 19
confidence_below_min(low<high): 18
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 15
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 14
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 12
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 11
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 10
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 10
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 5
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 4
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 4
Breakdown by confidence:
high: 24 pass, 2 fail (total: 26)
low: 0 pass, 131 fail (total: 131)
medium: 0 pass, 116 fail (total: 116)
Arriba filter: 273 rows -> 24 PASS; wrote 659_cYf-T1-TRNA-1_B23MHV2LT4_1.arriba.fusions.filtered.tsv and 659_cYf-T1-TRNA-1_B23MHV2LT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: 659_cYf-T1-TRNA-1_B23MHV2LT4_1.arriba.fusions.filter_summary.txt