Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d9/d6b21777eaa44be50abd18de7f4251/659_bua-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/64/53cf39f6294566a8d9df277ab40e56/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/64/53cf39f6294566a8d9df277ab40e56/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory
ls: *.crai: No such file or directory