AIH curated blacklist: matched 10 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 122
Pass (FILTER=PASS): 7 (5.7%)
Fail (FILTER=FAIL): 115 (94.3%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 10
All 10 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 18
confidence_below_min(medium<high): 18
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 13
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 12
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 10
confidence_below_min(low<high): 9
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 8
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 7
confidence_below_min(medium<high);aih_curated_blacklist: 4
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0);aih_curated_blacklist: 3
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 2
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 2
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 2
total_reads_below_min(7.0<8.0): 1
total_reads_below_min(5.0<8.0);aih_curated_blacklist: 1
Breakdown by confidence:
high: 7 pass, 2 fail (total: 9)
low: 0 pass, 70 fail (total: 70)
medium: 0 pass, 43 fail (total: 43)
Arriba filter: 122 rows -> 7 PASS; wrote 659_ciZ-T1-TRNA-1_B23MHV2LT4_1.arriba.fusions.filtered.tsv and 659_ciZ-T1-TRNA-1_B23MHV2LT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: 659_ciZ-T1-TRNA-1_B23MHV2LT4_1.arriba.fusions.filter_summary.txt