Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3b/e5a085e9069ad7f09edfee5ffc3dc5/.command.sh Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3b/e5a085e9069ad7f09edfee5ffc3dc5/.command.run Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3c/ec0f82af30d147b2e71579937949ce/659_6i-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4b/1334352268c0695f37d4ead59565d2/659_6i-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai ==> STAGING COMPLETE (4 inputs) [W::hts_idx_load3] The index file is older than the data file: 659_6i-T1-TRNA-1_B23MHV2LT4_1.Aligned.sortedByCoord.out.bam.bai Load BAM file ... Done