AIH curated blacklist: matched 5 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 305
Pass (FILTER=PASS): 32 (10.5%)
Fail (FILTER=FAIL): 273 (89.5%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 5
All 5 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 100
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 40
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 24
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 17
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 16
confidence_below_min(low<high): 11
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 10
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 8
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 8
confidence_below_min(low<high);total_reads_below_min(7.0<8.0): 6
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 5
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 5
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 4
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 4
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 3
Breakdown by confidence:
high: 32 pass, 5 fail (total: 37)
low: 0 pass, 126 fail (total: 126)
medium: 0 pass, 142 fail (total: 142)
Arriba filter: 305 rows -> 32 PASS; wrote 659_dRe-T1-TRNA-1_B23MHV2LT4_1.arriba.fusions.filtered.tsv and 659_dRe-T1-TRNA-1_B23MHV2LT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: 659_dRe-T1-TRNA-1_B23MHV2LT4_1.arriba.fusions.filter_summary.txt