Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ef/cd38bc0cc317b6e7803b4386ad6b5a/659_ciZ-T1-TRNA-1_B23MHV2LT4_1.star_alignment.Aligned.sortedByCoord.out.cram
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/08/a7bb4acf25bf1a896c4d15c25cbd83/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/08/a7bb4acf25bf1a896c4d15c25cbd83/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.bai: No such file or directory
ls: *.csi: No such file or directory