|
succeeded
|
NFCORE_SAREK:PUBLISH_INPUT_SAMPLESHEET (input_samplesheet)
|
4s |
2s |
0s |
1s |
0 bytes |
92% |
2.3 MB |
2.3 MB |
0 bytes |
2.3 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:AGGREGATE_VARIANT_QC (variant_qc_aggregation)
|
5m 46s |
1s |
33s |
5m 11s |
30.2 MB |
100% |
879.0 MB |
3.1 MB |
736.0 KB |
2.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BGZIPTABIX_GERMLINE_CNV (1029_01F-N1-BDNA-1_B23KFG5LT4_1;null)
|
3s |
2s |
- |
- |
6.0 MB |
107% |
3.4 MB |
241.7 KB |
0 bytes |
248.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BGZIPTABIX_GERMLINE_CNV (1029_032-N1-BDNA-1_235YY7LT3_1;null)
|
5s |
4s |
- |
- |
3.3 MB |
99% |
939.3 KB |
92.3 KB |
0 bytes |
96.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BGZIPTABIX_GERMLINE_CNV (1029_032-N1-BDNA-1_2375WFLT3_s01;null)
|
4s |
3s |
- |
- |
3.1 MB |
83% |
1005.1 KB |
99.2 KB |
0 bytes |
104.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BGZIPTABIX_GERMLINE_CNV (1029_05O-N1-BDNA-1_235YY7LT3_1;null)
|
6s |
4s |
- |
- |
3.2 MB |
89% |
961.9 KB |
92.8 KB |
0 bytes |
100.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BGZIPTABIX_GERMLINE_CNV (1029_05O-N1-BDNA-1_2375WFLT3_s02;null)
|
16s |
15s |
- |
- |
3.2 MB |
110% |
1010.7 KB |
101.1 KB |
0 bytes |
104.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BGZIPTABIX_GERMLINE_CNV (1029_0DT-N1-BDNA-1_235YY7LT3_1;null)
|
4s |
3s |
- |
- |
3.3 MB |
108% |
931.8 KB |
90.4 KB |
0 bytes |
96.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BGZIPTABIX_GERMLINE_CNV (1029_0DT-N1-BDNA-1_2375WFLT3_s03;null)
|
3s |
2s |
- |
- |
3.3 MB |
85% |
992.6 KB |
96.9 KB |
0 bytes |
100.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BGZIPTABIX_GERMLINE_CNV (1029_0NX-N1-BDNA-1_235YY7LT3_1;null)
|
3s |
2s |
- |
- |
3.3 MB |
115% |
932.0 KB |
90.4 KB |
0 bytes |
96.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BGZIPTABIX_GERMLINE_CNV (1029_0NX-N1-BDNA-1_2375WFLT3_s04;null)
|
4s |
2s |
- |
- |
3.2 MB |
84% |
1003.5 KB |
98.8 KB |
0 bytes |
104.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BGZIPTABIX_GERMLINE_CNV (1029_1CZ-N1-BDNA-1_A237YLNLT3_1;null)
|
3s |
2s |
- |
- |
6.2 MB |
97% |
4.5 MB |
672.4 KB |
0 bytes |
680.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BGZIPTABIX_GERMLINE_CNV (1029_1CZ-N1-BDNA-1_A23WF23LT4_1;null)
|
4s |
3s |
- |
- |
6.0 MB |
123% |
2.4 MB |
185.6 KB |
0 bytes |
192.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BGZIPTABIX_GERMLINE_CNV (1029_1CZ-N1-BDNA-1_A23WF23LT4_2;null)
|
4s |
3s |
- |
- |
6.1 MB |
123% |
2.4 MB |
186.6 KB |
0 bytes |
192.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BGZIPTABIX_GERMLINE_CNV (1029_1CZ-N1-BDNA-1_A23WF23LT4_3;null)
|
4s |
3s |
- |
- |
6.0 MB |
91% |
2.5 MB |
207.1 KB |
0 bytes |
212.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BGZIPTABIX_GERMLINE_CNV (1029_1CZ-N1-BDNA-1_A23WF23LT4_4;null)
|
3s |
2s |
- |
- |
5.9 MB |
105% |
2.4 MB |
190.8 KB |
0 bytes |
196.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BGZIPTABIX_GERMLINE_CNV (1029_1CZ-N1-BDNA-1_B23H2GYLT3_1;null)
|
4s |
2s |
- |
- |
3.2 MB |
97% |
1.3 MB |
138.6 KB |
0 bytes |
144.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BGZIPTABIX_GERMLINE_CNV (1029_1CZ-N1-BDNA-1_B23K7JFLT3_1;null)
|
4s |
2s |
- |
- |
6.0 MB |
111% |
3.3 MB |
535.5 KB |
0 bytes |
540.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BGZIPTABIX_GERMLINE_CNV (1029_1EQ-N1-BDNA-1_A23H3W5LT3_1;null)
|
4s |
2s |
- |
- |
3.2 MB |
71% |
1.3 MB |
136.4 KB |
0 bytes |
140.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BGZIPTABIX_GERMLINE_CNV (1029_1G0-N1-BDNA-1_235YY7LT3_1;null)
|
4s |
2s |
- |
- |
3.3 MB |
92% |
959.8 KB |
93.9 KB |
0 bytes |
100.0 KB |
1 |