neg_somatic_000.snv_indel.tmb.vars.txt

File Info

Filename: neg_somatic_000.snv_indel.tmb.vars.txt
Full Path: s3://natera-platform-sandbox/platform-users/rsrivas/pipeline_runs/sarek_dna_qc/snv_indel_rerun_20260604/negative_somatic/dna-qc-neg-snv-indel-20260604-0604-1917__624ba641--20260604-191715/variant_calling/snv_indel/neg_somatic_000/neg_somatic_000.snv_indel.tmb.vars.txt
Size: 852 bytes
Workflow Run: dna-qc-neg-snv-indel-20260604-0604-1917
Published: Jun 04, 2026 1:16 PM

Content

CHROM,POS,REF,ALT,IMPACT,CONSEQUENCE,IS_NON_SYNONYMOUS,TUMOR_GT,NORMAL_GT,TUMOR_VAF
chr1,27953351,CA,C,HIGH,frameshift_variant,TRUE,0/1,0/0,0.052100
chr1,202741665,C,G,MODERATE,missense_variant,TRUE,0|1,0/0,0.057700
chr3,100556804,T,G,MODERATE,missense_variant,TRUE,0/1,0/0,0.076800
chr3,142499716,G,C,MODERATE,missense_variant&splice_region_variant,TRUE,0/1,0/0,0.089300
chr3,151338472,T,A,MODERATE,missense_variant,TRUE,0|1,0/0,0.077000
chr4,15527604,A,T,MODERATE,missense_variant,TRUE,0/1,0/0,0.062400
chr6,89083879,A,G,MODERATE,missense_variant,TRUE,0|1,0/0,0.067100
chr9,83663968,AC,TG,MODERATE,missense_variant,TRUE,0|1,0/0,0.120000
chr10,17100086,T,A,MODERATE,missense_variant,TRUE,0|1,0/0,0.108000
chr10,89433188,T,G,MODERATE,missense_variant,TRUE,0/1,0/0,0.057000
chr12,21471452,T,G,MODERATE,missense_variant,TRUE,0/1,0/0,0.142000