|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:MERGE_STRELKA_INDELS (neg_somatic_001)
|
6s |
1s |
3s |
2s |
246.2 MB |
337% |
96.3 MB |
962.6 KB |
0 bytes |
968.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:MERGE_STRELKA_SNVS (neg_somatic_001)
|
7s |
1s |
3s |
3s |
215.8 MB |
353% |
96.7 MB |
1.4 MB |
0 bytes |
1.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_TNSEQ:SENTIEON_TNHAPLOTYPER2 (neg_somatic_001)
|
14m 15s |
1m 42s |
10m 15s |
2m 17s |
2.3 GB |
1157% |
139.1 GB |
32.4 MB |
24.3 GB |
720.5 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_TNSEQ:SENTIEON_TNFILTER (neg_somatic_001)
|
16s |
4s |
3s |
8s |
143.7 MB |
741% |
725.6 MB |
5.5 MB |
0 bytes |
28.5 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:PREP_STRELKA_INDEL (neg_somatic_001)
|
25s |
7s |
8s |
9s |
60.3 MB |
267% |
3.2 GB |
2.7 MB |
0 bytes |
652.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:PREP_TNSEQ_SNV (neg_somatic_001)
|
26s |
7s |
9s |
9s |
98.6 MB |
255% |
3.4 GB |
21.4 MB |
0 bytes |
2.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:BCFTOOLS_CONCAT (neg_somatic_001)
|
6s |
4s |
- |
- |
26.9 MB |
3573% |
9.9 MB |
1.3 MB |
0 bytes |
1.3 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:EXTRACT_CHROMOSOMES (neg_somatic_001)
|
3s |
2s |
0s |
0s |
3.7 MB |
240% |
195.0 KB |
966 bytes |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:CONCAT_WHATSHAP_VCFS (neg_somatic_001)
|
5s |
2s |
1s |
2s |
3.2 MB |
3153% |
5.9 MB |
1.4 MB |
0 bytes |
1.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:LABEL_HOTSPOTS (neg_somatic_001)
|
3s |
2s |
0s |
0s |
17.2 MB |
100% |
34.9 MB |
30.3 MB |
0 bytes |
30.3 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:ANNOTATE_BED_INFO (neg_somatic_001)
|
7s |
2s |
3s |
1s |
330.3 MB |
915% |
94.8 MB |
8.4 MB |
0 bytes |
8.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:HARD_FILTER_VCF (neg_somatic_001)
|
4s |
1s |
0s |
2s |
16.8 MB |
100% |
42.3 MB |
31.0 MB |
0 bytes |
31.0 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:TMB_SNV_INDEL (neg_somatic_001)
|
6s |
3s |
0s |
2s |
17.6 MB |
99% |
40.4 MB |
31.0 MB |
0 bytes |
31.0 MB |
1 |